View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6830_low_9 (Length: 241)

Name: NF6830_low_9
Description: NF6830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6830_low_9
NF6830_low_9
[»] chr4 (36 HSPs)
chr4 (120-232)||(15560463-15560577)
chr4 (118-232)||(22089476-22089589)
chr4 (120-230)||(41115618-41115728)
chr4 (126-232)||(6640891-6640997)
chr4 (120-232)||(8686244-8686353)
chr4 (120-216)||(11914864-11914960)
chr4 (120-232)||(44397403-44397516)
chr4 (143-232)||(11900325-11900413)
chr4 (118-236)||(29681315-29681434)
chr4 (120-232)||(3792527-3792640)
chr4 (120-235)||(19611171-19611288)
chr4 (120-232)||(22676362-22676475)
chr4 (119-232)||(29120559-29120675)
chr4 (118-232)||(54679052-54679168)
chr4 (120-230)||(12599948-12600060)
chr4 (120-232)||(24628699-24628814)
chr4 (181-230)||(17538921-17538970)
chr4 (120-235)||(23120732-23120848)
chr4 (120-232)||(37436332-37436445)
chr4 (120-199)||(17788874-17788954)
chr4 (120-232)||(23749715-23749833)
chr4 (123-232)||(15134915-15135026)
chr4 (120-232)||(14905127-14905242)
chr4 (120-183)||(40859900-40859963)
chr4 (122-232)||(56033722-56033835)
chr4 (182-225)||(10661995-10662038)
chr4 (182-225)||(10876140-10876183)
chr4 (114-205)||(14605735-14605829)
chr4 (120-172)||(20976646-20976699)
chr4 (117-170)||(31267577-31267630)
chr4 (120-232)||(3106218-3106329)
chr4 (183-232)||(14357599-14357648)
chr4 (120-235)||(16631631-16631749)
chr4 (119-171)||(13692992-13693044)
chr4 (120-152)||(14116000-14116032)
chr4 (119-170)||(33377562-33377613)
[»] chr6 (36 HSPs)
chr6 (118-232)||(17304106-17304224)
chr6 (118-236)||(15301411-15301531)
chr6 (120-232)||(3680299-3680411)
chr6 (120-232)||(13435080-13435194)
chr6 (152-232)||(7762867-7762947)
chr6 (120-235)||(13601362-13601479)
chr6 (120-232)||(17380757-17380872)
chr6 (142-232)||(19469849-19469938)
chr6 (126-229)||(26941607-26941710)
chr6 (120-231)||(19085327-19085440)
chr6 (118-232)||(21624284-21624401)
chr6 (120-232)||(32543458-32543572)
chr6 (120-232)||(10631331-10631446)
chr6 (118-232)||(14101284-14101400)
chr6 (120-232)||(15532470-15532585)
chr6 (119-232)||(22801338-22801452)
chr6 (120-232)||(16876107-16876217)
chr6 (120-232)||(19833829-19833942)
chr6 (120-235)||(25593269-25593383)
chr6 (142-232)||(19623205-19623296)
chr6 (118-232)||(9717018-9717135)
chr6 (119-232)||(16332923-16333038)
chr6 (122-232)||(16528511-16528624)
chr6 (120-220)||(19624971-19625073)
chr6 (174-229)||(17926995-17927050)
chr6 (121-232)||(24116013-24116127)
chr6 (142-232)||(20113473-20113565)
chr6 (120-232)||(21234350-21234465)
chr6 (114-170)||(32756750-32756806)
chr6 (143-235)||(14732952-14733045)
chr6 (118-147)||(10972370-10972399)
chr6 (117-170)||(11021309-11021363)
chr6 (115-170)||(16124326-16124381)
chr6 (119-147)||(16266243-16266271)
chr6 (119-147)||(25787046-25787074)
chr6 (117-170)||(31571766-31571820)
[»] chr2 (34 HSPs)
chr2 (120-230)||(41122473-41122583)
chr2 (120-232)||(23185123-23185233)
chr2 (120-232)||(23596386-23596496)
chr2 (120-231)||(22271293-22271401)
chr2 (119-232)||(24851463-24851578)
chr2 (120-232)||(28702015-28702129)
chr2 (120-232)||(40780504-40780618)
chr2 (157-232)||(24724093-24724168)
chr2 (120-232)||(24778525-24778640)
chr2 (122-235)||(20569537-20569652)
chr2 (164-232)||(26623262-26623330)
chr2 (119-232)||(22455750-22455866)
chr2 (121-232)||(25188600-25188711)
chr2 (120-235)||(24575226-24575344)
chr2 (120-232)||(39038431-39038545)
chr2 (120-232)||(45087788-45087902)
chr2 (120-235)||(17964091-17964208)
chr2 (120-235)||(22257383-22257501)
chr2 (123-235)||(25828352-25828466)
chr2 (120-214)||(31328783-31328878)
chr2 (120-214)||(31335504-31335599)
chr2 (119-232)||(22188898-22189014)
chr2 (120-232)||(28551712-28551825)
chr2 (114-190)||(19539641-19539717)
chr2 (183-232)||(24838350-24838399)
chr2 (151-232)||(10010541-10010624)
chr2 (120-232)||(21537978-21538092)
chr2 (120-170)||(22316797-22316846)
chr2 (120-183)||(27294685-27294749)
chr2 (120-170)||(38040801-38040851)
chr2 (112-170)||(22763021-22763080)
chr2 (120-184)||(22782472-22782536)
chr2 (119-147)||(20567415-20567443)
chr2 (120-171)||(24450305-24450356)
[»] scaffold0598 (1 HSPs)
scaffold0598 (142-232)||(2586-2675)
[»] scaffold0081 (1 HSPs)
scaffold0081 (120-232)||(13191-13303)
[»] chr5 (26 HSPs)
chr5 (120-227)||(21199846-21199953)
chr5 (122-232)||(25097871-25097981)
chr5 (122-232)||(25156963-25157073)
chr5 (120-232)||(22000855-22000969)
chr5 (142-232)||(21207636-21207726)
chr5 (120-235)||(6513255-6513373)
chr5 (120-232)||(7746524-7746639)
chr5 (120-232)||(90261-90375)
chr5 (120-232)||(31487403-31487517)
chr5 (120-232)||(6498511-6498623)
chr5 (118-232)||(19546358-19546471)
chr5 (120-232)||(30116702-30116816)
chr5 (120-232)||(3246291-3246403)
chr5 (120-232)||(21076011-21076125)
chr5 (120-232)||(21100578-21100692)
chr5 (126-232)||(23413804-23413913)
chr5 (142-232)||(11993107-11993197)
chr5 (119-232)||(13546355-13546471)
chr5 (120-183)||(28465225-28465287)
chr5 (120-232)||(33932460-33932576)
chr5 (119-232)||(35932834-35932950)
chr5 (120-232)||(37395362-37395476)
chr5 (120-171)||(26120710-26120760)
chr5 (120-232)||(30742135-30742248)
chr5 (119-233)||(9399440-9399557)
chr5 (119-170)||(33021844-33021895)
[»] chr3 (55 HSPs)
chr3 (120-235)||(19889782-19889899)
chr3 (120-230)||(12967511-12967622)
chr3 (119-232)||(19250236-19250349)
chr3 (142-232)||(26418569-26418658)
chr3 (174-229)||(6252657-6252712)
chr3 (120-230)||(14310877-14310987)
chr3 (120-235)||(15902393-15902509)
chr3 (122-232)||(14063890-14063999)
chr3 (124-229)||(6174498-6174599)
chr3 (120-232)||(23539073-23539185)
chr3 (120-232)||(6089925-6090039)
chr3 (120-232)||(14954607-14954721)
chr3 (120-232)||(19885924-19886038)
chr3 (120-232)||(29952283-29952400)
chr3 (120-232)||(30001437-30001554)
chr3 (120-232)||(12727082-12727196)
chr3 (120-232)||(40799085-40799201)
chr3 (120-232)||(8874971-8875086)
chr3 (120-232)||(14393841-14393956)
chr3 (182-232)||(20724298-20724348)
chr3 (120-232)||(52282991-52283106)
chr3 (120-227)||(17667566-17667676)
chr3 (120-235)||(49643607-49643725)
chr3 (120-232)||(1241921-1242035)
chr3 (164-232)||(12221300-12221368)
chr3 (120-232)||(49554356-49554470)
chr3 (121-232)||(2560383-2560496)
chr3 (121-232)||(16031701-16031814)
chr3 (120-183)||(22465377-22465439)
chr3 (120-232)||(52919622-52919735)
chr3 (120-230)||(12963934-12964046)
chr3 (120-232)||(14968561-14968680)
chr3 (126-232)||(17239775-17239883)
chr3 (124-232)||(21639128-21639237)
chr3 (142-235)||(13939116-13939210)
chr3 (120-232)||(22804867-22804980)
chr3 (119-226)||(2025292-2025397)
chr3 (120-232)||(11189191-11189304)
chr3 (114-170)||(38194117-38194174)
chr3 (120-231)||(41494200-41494312)
chr3 (120-170)||(11073624-11073673)
chr3 (120-232)||(29854607-29854721)
chr3 (120-170)||(41044900-41044950)
chr3 (119-152)||(16881443-16881476)
chr3 (118-170)||(17960803-17960855)
chr3 (118-170)||(19888135-19888187)
chr3 (120-229)||(31302547-31302657)
chr3 (120-232)||(38178491-38178606)
chr3 (119-170)||(3237890-3237941)
chr3 (120-152)||(14006879-14006911)
chr3 (142-194)||(16199932-16199983)
chr3 (119-170)||(17910787-17910838)
chr3 (143-232)||(20628308-20628398)
chr3 (119-170)||(28165379-28165430)
chr3 (120-183)||(28581292-28581355)
[»] scaffold0113 (1 HSPs)
scaffold0113 (129-232)||(2403-2506)
[»] chr1 (28 HSPs)
chr1 (120-232)||(21192654-21192767)
chr1 (120-232)||(17025772-17025884)
chr1 (120-232)||(18614108-18614221)
chr1 (120-232)||(12625318-12625430)
chr1 (120-232)||(7308986-7309099)
chr1 (120-235)||(22202648-22202764)
chr1 (120-232)||(30892260-30892374)
chr1 (118-232)||(14294052-14294166)
chr1 (120-232)||(25449357-25449469)
chr1 (116-232)||(22153017-22153135)
chr1 (174-229)||(17017822-17017877)
chr1 (119-232)||(21983792-21983908)
chr1 (118-232)||(1577042-1577158)
chr1 (120-230)||(12283590-12283700)
chr1 (120-213)||(20959819-20959911)
chr1 (163-235)||(22202526-22202600)
chr1 (152-232)||(22428108-22428190)
chr1 (120-232)||(2833856-2833965)
chr1 (118-152)||(22637456-22637490)
chr1 (125-235)||(33257135-33257247)
chr1 (125-235)||(33277307-33277419)
chr1 (120-170)||(39194924-39194974)
chr1 (183-232)||(20908689-20908738)
chr1 (130-232)||(38281569-38281672)
chr1 (163-232)||(2266324-2266395)
chr1 (120-152)||(23053577-23053609)
chr1 (110-230)||(29214985-29215107)
chr1 (120-152)||(42283840-42283872)
[»] chr8 (35 HSPs)
chr8 (122-232)||(18771889-18771997)
chr8 (120-232)||(43644073-43644185)
chr8 (120-235)||(17007500-17007617)
chr8 (142-232)||(19706726-19706815)
chr8 (119-232)||(30422277-30422392)
chr8 (120-232)||(25163261-25163375)
chr8 (120-232)||(19957185-19957299)
chr8 (120-232)||(45539331-45539445)
chr8 (120-235)||(17541333-17541450)
chr8 (152-232)||(15336934-15337015)
chr8 (152-232)||(15425999-15426080)
chr8 (152-232)||(15517303-15517384)
chr8 (120-232)||(22672968-22673080)
chr8 (142-235)||(12758586-12758680)
chr8 (120-232)||(14990935-14991049)
chr8 (142-235)||(19153237-19153331)
chr8 (119-235)||(36104533-36104651)
chr8 (122-232)||(23185593-23185703)
chr8 (191-236)||(29692575-29692620)
chr8 (162-235)||(16682097-16682172)
chr8 (120-231)||(18121980-18122094)
chr8 (191-235)||(20256356-20256400)
chr8 (191-235)||(20256441-20256485)
chr8 (120-232)||(31445292-31445406)
chr8 (119-170)||(9767963-9768013)
chr8 (116-147)||(17442787-17442818)
chr8 (157-232)||(16206458-16206535)
chr8 (120-170)||(43638954-43639004)
chr8 (191-232)||(17442694-17442735)
chr8 (142-232)||(17796630-17796721)
chr8 (120-172)||(43773308-43773360)
chr8 (120-171)||(1210610-1210661)
chr8 (120-171)||(13431528-13431579)
chr8 (120-171)||(17287073-17287124)
chr8 (120-171)||(18676847-18676898)
[»] chr7 (52 HSPs)
chr7 (120-230)||(10884021-10884133)
chr7 (122-232)||(13261524-13261636)
chr7 (119-232)||(19237910-19238023)
chr7 (120-232)||(13902504-13902616)
chr7 (120-232)||(4493739-4493853)
chr7 (120-232)||(33604099-33604213)
chr7 (120-232)||(21211427-21211542)
chr7 (120-232)||(39285390-39285503)
chr7 (120-232)||(5001711-5001826)
chr7 (124-235)||(16315383-16315497)
chr7 (120-232)||(12367606-12367720)
chr7 (120-232)||(13259292-13259406)
chr7 (120-232)||(14186880-14186995)
chr7 (168-232)||(13424766-13424831)
chr7 (120-232)||(11792065-11792179)
chr7 (142-235)||(13731522-13731616)
chr7 (120-232)||(21284223-21284337)
chr7 (120-232)||(29936194-29936301)
chr7 (173-232)||(9099107-9099166)
chr7 (173-232)||(9099921-9099980)
chr7 (118-225)||(16557466-16557575)
chr7 (118-225)||(16608087-16608196)
chr7 (118-232)||(21691615-21691733)
chr7 (120-183)||(30025128-30025192)
chr7 (120-235)||(11318589-11318707)
chr7 (120-232)||(15705343-15705458)
chr7 (120-232)||(13027800-13027914)
chr7 (142-235)||(13645669-13645763)
chr7 (120-232)||(2499223-2499337)
chr7 (116-183)||(8182149-8182215)
chr7 (120-232)||(13138774-13138889)
chr7 (113-183)||(1292240-1292311)
chr7 (164-230)||(13302100-13302168)
chr7 (142-232)||(13879361-13879452)
chr7 (162-232)||(16317445-16317517)
chr7 (118-232)||(22580103-22580220)
chr7 (116-235)||(2914502-2914623)
chr7 (152-232)||(28623202-28623284)
chr7 (183-229)||(3921650-3921696)
chr7 (120-170)||(8932954-8933003)
chr7 (165-236)||(9069000-9069073)
chr7 (164-235)||(13681534-13681607)
chr7 (119-171)||(1559955-1560007)
chr7 (142-232)||(14424525-14424616)
chr7 (142-232)||(16546186-16546277)
chr7 (142-232)||(16619385-16619476)
chr7 (120-172)||(3779533-3779584)
chr7 (119-170)||(6045143-6045194)
chr7 (119-232)||(13034702-13034819)
chr7 (119-147)||(18418583-18418611)
chr7 (164-232)||(26042651-26042719)
chr7 (120-152)||(48063740-48063772)
[»] scaffold0025 (1 HSPs)
scaffold0025 (128-227)||(73736-73835)
[»] scaffold1747 (1 HSPs)
scaffold1747 (120-204)||(517-602)
[»] scaffold1745 (1 HSPs)
scaffold1745 (120-204)||(809-894)
[»] scaffold0028 (2 HSPs)
scaffold0028 (120-224)||(80560-80664)
scaffold0028 (120-232)||(24576-24689)
[»] scaffold0364 (1 HSPs)
scaffold0364 (122-232)||(5372-5483)
[»] scaffold1657 (1 HSPs)
scaffold1657 (120-229)||(1014-1123)
[»] scaffold0004 (3 HSPs)
scaffold0004 (119-222)||(245064-245167)
scaffold0004 (120-235)||(378348-378466)
scaffold0004 (120-232)||(210603-210715)
[»] scaffold0859 (1 HSPs)
scaffold0859 (117-232)||(2163-2280)
[»] scaffold0035 (3 HSPs)
scaffold0035 (120-228)||(28976-29079)
scaffold0035 (122-230)||(20267-20376)
scaffold0035 (120-232)||(110392-110509)
[»] scaffold0567 (1 HSPs)
scaffold0567 (120-232)||(9098-9209)
[»] scaffold0210 (1 HSPs)
scaffold0210 (120-232)||(817-932)
[»] scaffold0163 (1 HSPs)
scaffold0163 (126-232)||(25630-25739)
[»] scaffold0439 (1 HSPs)
scaffold0439 (120-232)||(7509-7623)
[»] scaffold0040 (1 HSPs)
scaffold0040 (120-232)||(2870-2987)
[»] scaffold0471 (1 HSPs)
scaffold0471 (119-235)||(2650-2767)
[»] scaffold0273 (1 HSPs)
scaffold0273 (120-231)||(4887-4998)
[»] scaffold0022 (2 HSPs)
scaffold0022 (120-230)||(36626-36738)
scaffold0022 (120-230)||(134686-134798)
[»] scaffold0315 (1 HSPs)
scaffold0315 (120-228)||(7866-7976)
[»] scaffold0530 (1 HSPs)
scaffold0530 (142-230)||(2816-2905)
[»] scaffold0084 (2 HSPs)
scaffold0084 (120-235)||(31786-31903)
scaffold0084 (120-235)||(48512-48630)
[»] scaffold0026 (1 HSPs)
scaffold0026 (120-235)||(7076-7193)
[»] scaffold0290 (1 HSPs)
scaffold0290 (120-232)||(19454-19569)
[»] scaffold0064 (1 HSPs)
scaffold0064 (152-232)||(44665-44745)
[»] scaffold0023 (1 HSPs)
scaffold0023 (121-232)||(102752-102866)
[»] scaffold0498 (1 HSPs)
scaffold0498 (120-204)||(1037-1126)
[»] scaffold0479 (1 HSPs)
scaffold0479 (120-232)||(9158-9277)
[»] scaffold0205 (1 HSPs)
scaffold0205 (118-232)||(752-868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (126-232)||(14317-14425)
[»] scaffold0116 (1 HSPs)
scaffold0116 (120-179)||(21790-21849)
[»] scaffold0337 (1 HSPs)
scaffold0337 (192-235)||(14238-14281)
[»] scaffold0065 (1 HSPs)
scaffold0065 (192-235)||(1280-1323)
[»] scaffold0005 (1 HSPs)
scaffold0005 (114-205)||(211549-211643)
[»] scaffold1539 (1 HSPs)
scaffold1539 (120-170)||(1558-1608)
[»] scaffold0738 (1 HSPs)
scaffold0738 (120-170)||(5623-5673)
[»] scaffold0525 (1 HSPs)
scaffold0525 (120-170)||(7054-7103)
[»] scaffold0056 (1 HSPs)
scaffold0056 (120-183)||(26500-26564)
[»] scaffold0009 (2 HSPs)
scaffold0009 (183-229)||(267977-268023)
scaffold0009 (115-183)||(83489-83556)
[»] scaffold0267 (1 HSPs)
scaffold0267 (118-170)||(7178-7230)
[»] scaffold0193 (1 HSPs)
scaffold0193 (120-153)||(16956-16989)
[»] scaffold0072 (1 HSPs)
scaffold0072 (116-170)||(37556-37611)
[»] scaffold1149 (1 HSPs)
scaffold1149 (119-147)||(2590-2618)
[»] scaffold0217 (1 HSPs)
scaffold0217 (120-183)||(18231-18295)


Alignment Details
Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 15560463 - 15560577
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||| |||||||||||| ||||||||||| || |||||||||||||||||||||||||||  ||||||||||||||||||| | |||||||||||    
T  15560463 tgaaggtgaaaaaaacacaagaaggggggttgaa-ttgtgtttgctttttctttgttttctcctaaactgaagtcactgttcagaacctaatagagttca 15560561  T
Q  217 gcttctgaagtgatgt 232  Q
    ||||||||||||||||    
T  15560562 gcttctgaagtgatgt 15560577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 22089476 - 22089589
Alignment:
Q  118 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||||| |||||||||| || ||||  ||||||||| ||||| | ||||||||||||||| ||||||||| |||||||||||    
T  22089476 tctgaaggtgagaaaaacacaagaagggggttgaa-ttgtgttaactttttcttcgttttattctactgaagtcactgatcagaagcagatagagttcag 22089574  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  22089575 cttctgaagtgatgt 22089589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 41115728 - 41115618
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 219  Q
    |||||||||||||||||||||| |||||||  |||| ||||  ||||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  41115728 tgaaggtgagaaaaacacaagaagggggtttgaattgtgttaactttttcttcgttttctcctactgaagtcgctgatcagaagcagatagagttcagct 41115629  T
Q  220 tctgaagtgat 230  Q
    |||||||||||    
T  41115628 tctgaagtgat 41115618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 6640891 - 6640997
Alignment:
Q  126 tgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctga 224  Q
    ||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||| |||| |||||| || ||||||||| ||||||||||||||||||    
T  6640891 tgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcatacttaagtcattgatcagaagcagatagagttcagcttctga 6640989  T
Q  225 agtgatgt 232  Q
    ||||||||    
T  6640990 agtgatgt 6640997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 8686353 - 8686244
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 219  Q
    |||||||||||||| |||||||||||| ||||| || ||||||||||||||| |||||||| |||||||||||||| ||||||||| || |||||| |||    
T  8686353 tgaaggtgagaaaa-cacaagaggggg-ttgaa-ttgtgtttgctttttcttcgttttctcttactgaagtcactgatcagaagcagattgagttctgct 8686257  T
Q  220 tctgaagtgatgt 232  Q
    | |||||||||||    
T  8686256 tttgaagtgatgt 8686244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 11914864 - 11914960
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||  |||| ||||| |  |||| ||||  ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  11914864 tgaaggtgagaaaaactaaagaagggggattgaattgtgttaactttttcttcgttttctcctactgaaatcactggtcagaagcaaatagagttca 11914960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 44397403 - 44397516
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||| |||| |||||||||| || |||| ||||||||||  ||||||| ||  |||||  ||||| ||||||||| ||||||||| |    
T  44397403 tgaaggtgagaaaaacataagaagggggttgaa-ttgtgttggctttttcttctttttctcttaagctgaaaacactgatcagaagcagatagagttctg 44397501  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  44397502 cttctgaagtgatgt 44397516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 11900325 - 11900413
Alignment:
Q  143 gggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||||| || |||| | ||||| || ||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  11900325 gggggttgaa-ttgtgttagtttttttttcgttttttcctactgaaatcactgttcagaagcagatagagttcagattctgaagtgatgt 11900413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 29681434 - 29681315
Alignment:
Q  118 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||  ||||||||||||||| |||||||| |  |||| |||||||||| |||||||||||  |||||  ||||| ||| ||||||||||||| |    
T  29681434 tctgaaggtctgaaaaacacaagaggtgggttgaa-tagtgttagctttttcttcgttttctcctaagctgaaaacactgatcataagcaaatagagtac 29681336  T
Q  216 agcttctgaagtgatgtccat 236  Q
     |||||||||||||| |||||    
T  29681335 tgcttctgaagtgatttccat 29681315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 3792527 - 3792640
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||| ||||| |||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| | ||||||| |||||||||      
T  3792527 tgaaggtgagaaaaacgcaagacgggggttg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgcttagaagcagatagagttcta 3792625  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  3792626 cttctgaagtgatgt 3792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 19611288 - 19611171
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||| || |||| | |||||||| |||||||||||  ||| |  ||| | ||||||||| |||||||||     
T  19611288 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagttttttcttcgttttctcctaaactgtaaacacagatcagaagcacatagagttct 19611190  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||| ||||    
T  19611189 gcttctgaagtgatttcca 19611171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 22676475 - 22676362
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| ||||| || |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||      
T  22676475 tgaaggtgagaaaaacacaagaaggggggtg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttcta 22676377  T
Q  218 cttctgaagtgatgt 232  Q
    ||| |||||||||||    
T  22676376 cttttgaagtgatgt 22676362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 29120559 - 29120675
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    |||||||||||||||||||||||  ||||||||||| || |||| ||||| ||||  ||||||||||  |||||  ||||| ||||||||| ||||||||    
T  29120559 ctgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttggctttctcttctttttctcctaagctgaaaacactgatcagaagcagatagagtt 29120657  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  29120658 ctacttctgaagtgatgt 29120675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 54679052 - 54679168
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||| ||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||| ||||| ||||||||    
T  54679052 tctgatggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcaaaagcagatagagtt 54679150  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  54679151 ctacttctgaagtgatgt 54679168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 12599948 - 12600060
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||| |||||||||||| |||| ||||| |  |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||| |||||      
T  12599948 tgaatgtgagaaaaacataagaagggggattgaattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaataaagttcta 12600047  T
Q  218 cttctgaagtgat 230  Q
    |||||||||||||    
T  12600048 cttctgaagtgat 12600060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 24628814 - 24628699
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| |||||| || ||  ||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||    
T  24628814 tgaaggtgagaaaaatacaagaaggaggagttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttc 24628716  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  24628715 tacttctgaagtgatgt 24628699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 17538921 - 17538970
Alignment:
Q  181 ctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgat 230  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  17538921 ctactgaagtcactgatcagaagcagatagagttcagcttctaaagtgat 17538970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 23120732 - 23120848
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtc-actgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||| ||| |||||||| || |||| ||||||||||  ||||||||||  |||||    |||  |||||||||||||||||||     
T  23120732 tgaaggtgagaaaaacacaa-aggagggttgaa-ttgtgttagctttttcttcattttctcctaagctgaaaaagactaatcagaagcaaatagagttct 23120829  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||| ||||    
T  23120830 gcttctgaagtgatttcca 23120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 37436445 - 37436332
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| ||||| | ||||| || ||| ||||||||  ||||||||||   ||||  ||||| ||||||||| |||||||||      
T  37436445 tgaaggtgagaaaaacacaagaaggggggttaaattgtg-ttggtttttcttctttttctcctatgttgaaaacactgatcagaagcagatagagttcta 37436347  T
Q  218 cttctgaagtgatgt 232  Q
    ||| |||||||||||    
T  37436346 cttatgaagtgatgt 37436332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 17788954 - 17788874
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttca 199  Q
    ||||||||| |||||||||||| | |||  ||||| || |||||| |||||||| ||||||||||||| |||||||||||||    
T  17788954 tgaaggtgaaaaaaacacaagaagtgggagttgaa-ttgtgtttgttttttcttcgttttctcctacttaagtcactgttca 17788874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 23749715 - 23749833
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg----gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    |||||||||||||||||||||| ||||    | |  |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||| | |||||||    
T  23749715 tgaaggtgagaaaaacacaagaaggggaggggattgaattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagtagatagagt 23749814  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||||||||||    
T  23749815 tctacttctgaagtgatgt 23749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 15134915 - 15135026
Alignment:
Q  123 aggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttcagct 219  Q
    ||||||||||||||||||| ||||||||||| || |||| | | |||||| |||||||| ||   ||||  ||||| |||||||||||||||||||  ||    
T  15134915 aggtgagaaaaacacaagaaggggggttgaa-ttgtgttagttatttcttcgttttctcttaagttgaaaacactgatcagaagcaaatagagttccact 15135013  T
Q  220 tctgaagtgatgt 232  Q
    ||| |||||||||    
T  15135014 tctaaagtgatgt 15135026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 14905242 - 14905127
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||| ||||||||||| | |||||| |  |||| |||| ||||||||||  ||||||||||  |||||  || || ||||||||| |||||||||     
T  14905242 tgaaggtgggaaaaacacaacaaggggggattgaattgtgttggctttttcttctttttctcctaagctgaaaacattgatcagaagcagatagagttct 14905143  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  14905142 acttctgaagtgatgt 14905127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 40859900 - 40859963
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||||    
T  40859900 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttctttttctccta 40859963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 56033722 - 56033835
Alignment:
Q  122 aaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||  || |||||||| || |||| | ||||||||  ||||||||||  |||||  ||||  ||||||||| |||||||||      
T  56033722 aaggtgagaaaaacacaagaatggagggttgaa-ttgtgttggttttttcttctttttctcctaagctgaaaacacttatcagaagcagatagagttcta 56033820  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  56033821 cttctgaagtgatgt 56033835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 10662038 - 10661995
Alignment:
Q  182 tactgaagtcactgttcagaagcaaatagagttcagcttctgaa 225  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||    
T  10662038 tactgaagtcactgttgagaagcagatagagtccagcttctgaa 10661995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 10876183 - 10876140
Alignment:
Q  182 tactgaagtcactgttcagaagcaaatagagttcagcttctgaa 225  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||    
T  10876183 tactgaagtcactgttgagaagcagatagagtccagcttctgaa 10876140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Complemental strand, 14605829 - 14605735
Alignment:
Q  114 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagca 205  Q
    ||||| ||||||||||||||||||||| ||||||| |  |||| |||| ||||||| || |||||||||||  |||||  ||||| |||||||||    
T  14605829 agaatttgaaggtgagaaaaacacaagaaggggggattgaattgtgttagctttttattcgttttctcctaagctgaaaacactgatcagaagca 14605735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 20976646 - 20976699
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttcttt 172  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  20976646 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgtttgctttttcttt 20976699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 31267630 - 31267577
Alignment:
Q  117 atctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  31267630 atctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 31267577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 3106329 - 3106218
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagc 218  Q
    ||||||| |||||||||||||| |||| ||||| || |||| ||||||||||  |||||||||| |||||    | ||||||||||| |||||||||  |    
T  3106329 tgaaggtaagaaaaacacaagaagggg-ttgaa-ttgtgttagctttttcttctttttctcctaactgaaaatgcagttcagaagcagatagagttctac 3106232  T
Q  219 ttctgaagtgatgt 232  Q
    |||||||| |||||    
T  3106231 ttctgaagagatgt 3106218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 14357599 - 14357648
Alignment:
Q  183 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||| ||||||||||| |  ||||||||| ||||||||||||||||    
T  14357599 actgaagtgactgttcagaacctgatagagttcggcttctgaagtgatgt 14357648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 16631631 - 16631749
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||   |||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||| ||||||||||||||     
T  16631631 tgaaggtgagaaaaacacaagaagagggggttg-aattgtgttggttttttcttccttttctcctaagctgaaaacactgatcaaaagcaaatagagttt 16631729  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||||| || |||| ||||    
T  16631730 tgcttctaaaatgatttcca 16631749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 13692992 - 13693044
Alignment:
Q  119 ctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctt 171  Q
    ||||||||||||||||||||||| ||||| | ||||| |||| | ||||||||    
T  13692992 ctgaaggtgagaaaaacacaagaaggggggtcaaattgtgttagatttttctt 13693044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 14116000 - 14116032
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    |||||||||||||||||||||| ||||||||||    
T  14116000 tgaaggtgagaaaaacacaagaagggggttgaa 14116032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 33377562 - 33377613
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  33377562 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 33377613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 17304224 - 17304106
Alignment:
Q  118 tctgaaggtgagaaaaacacaaga-----ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagag 212  Q
    ||||||||||||||||||||||||     ||||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  17304224 tctgaaggtgagaaaaacacaagaagggtggggggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactgatcagaagcagatagag 17304126  T
Q  213 ttcagcttctgaagtgatgt 232  Q
    ||||||||||||||||||||    
T  17304125 ttcagcttctgaagtgatgt 17304106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 15301411 - 15301531
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||    
T  15301411 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagtt 15301509  T
Q  215 cagcttctgaagtgatgtccat 236  Q
    | |||||| ||||||| |||||    
T  15301510 ctgcttctaaagtgatttccat 15301531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 3680299 - 3680411
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||| |||||||| | ||| |||||||||| |||||| ||||||||| ||||||||||||    
T  3680299 tgaaggtgagaaaaacacaagaagggtggttg-aattgtgtttgttttttcttcgatttatcctactgaaatcactgatcagaagcagatagagttcagc 3680397  T
Q  219 ttctgaagtgatgt 232  Q
    |||||| |||||||    
T  3680398 ttctgaggtgatgt 3680411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 13435080 - 13435194
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||  |||||  ||||| ||||||||| |||||||||     
T  13435080 tgaaggtgagaaaaaaacaagaaggggggttg-aattgtgtttgctttttctttgttttctcctaagctgaaaacactgatcagaagcagatagagttct 13435178  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  13435179 acttctgaagtgatgt 13435194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 7762867 - 7762947
Alignment:
Q  152 aattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| |||| ||| |||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  7762867 aattgtgttagctatttcttcgttttctcctactgaaatcactgatcagaagcagatagagttcagcttctgaagtgatgt 7762947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 13601362 - 13601479
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||| ||||||||| ||||||||||| |  |||| |||||||||| |||||||||||  |||||  ||||| |||||||||||||||||||     
T  13601362 tgaaggtgagaataacacaagaaggggggttgaa-tcgtgttagctttttcttagttttctcctaagctgaaaacactgatcagaagcaaatagagttct 13601460  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||| ||||    
T  13601461 gcttctgaagtgatttcca 13601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 17380757 - 17380872
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| |||||||||||||||||||    
T  17380757 tgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcaaatagagttc 17380855  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  17380856 tacttctgaagtgatgt 17380872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 19469849 - 19469938
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||| |||||||| ||||||||||||||||||||||||| |||||| || |||||||||  |||||||||||||||    
T  19469849 ggggggttgaa-ttgtgttagctttttcattgttttctcctactgaagtcactgatcagaaacagatagagttccacttctgaagtgatgt 19469938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 26941607 - 26941710
Alignment:
Q  126 tgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctga 224  Q
    ||||||||||||||||  ||| |||||| || |||| |||||||||| ||||||| | ||||||||||||| ||||||||| ||||||||||| ||||||    
T  26941607 tgagaaaaacacaagaaagggagttgaa-ttgtgttagctttttcttcgttttcttccactgaagtcactgatcagaagcagatagagttcagattctga 26941705  T
Q  225 agtga 229  Q
    |||||    
T  26941706 agtga 26941710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 19085327 - 19085440
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||| |||||||||||| |||||||||| |||| |||| |||||||||| |||||||| ||  |||||  ||||| | |||||||||||||||||     
T  19085327 tgaaggtgtgaaaaacacaagaaggggggttg-aattgtgttggctttttcttcgttttctcataagctgaaaacactgataagaagcaaatagagttct 19085425  T
Q  217 gcttctgaagtgatg 231  Q
    |||||||||||||||    
T  19085426 gcttctgaagtgatg 19085440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 21624284 - 21624401
Alignment:
Q  118 tctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||    
T  21624284 tctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagt 21624382  T
Q  214 tcagcttctgaagtgatgt 232  Q
    |   |||||||||||||||    
T  21624383 tttacttctgaagtgatgt 21624401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 32543458 - 32543572
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| ||| |||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  32543458 tgaaggtgagaaaaacacaagaaggagggttg-aattgtgttagctttttcttctttttctcctaacctgaaaacactgatcagaagcagatagagttcc 32543556  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  32543557 acttctgaagtgatgt 32543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 10631331 - 10631446
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  || |||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||    
T  10631331 tgaaggtgagaaaaacacaagaatggagggttgaa-ttgtgttagctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttc 10631429  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  10631430 tacttctgaagtgatgt 10631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 14101400 - 14101284
Alignment:
Q  118 tctgaaggtgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||||  |||||||||| || |||| |||||||||| |||||||||||  |||||   |||| ||||||||| ||||||||    
T  14101400 tctgaaggtgagaaaaacacaagaaagggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaatactgatcagaagcagatagagtt 14101302  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  ||| |||||||||||    
T  14101301 ctacttatgaagtgatgt 14101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 15532585 - 15532470
Alignment:
Q  120 tgaaggtgagaaaaacacaagagg--ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| |  ||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| |||| ||||||||||||||    
T  15532585 tgaaggtgagaaaaacacaagaagaaggggttgaa-ttgtgttagctttttcttctttttctcctaagctgaaaacactgatcaggagcaaatagagttc 15532487  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  15532486 tacttctgaagtgatgt 15532470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 22801338 - 22801452
Alignment:
Q  119 ctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||| ||||  || |   ||||| ||||||||| |||||||||     
T  22801338 ctgaaggtgagaaaaacacaagaagggggttg-aattgtgttagctttttcttatttttcacctaagctaataacactgatcagaagcagatagagttct 22801436  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  22801437 acttctgaagtgatgt 22801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 16876107 - 16876217
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||  |||||||||| |||| |||||| ||||||||  ||||||| | ||||||  ||||| |||| || | ||||||||| ||    
T  16876107 tgaaggtgagaaaaacaca--aggggggttg-aattatgtttgttttttcttatttttctcttaactgaaaacactgatcaggagtagatagagttctgc 16876203  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  16876204 ttctgaagtgatgt 16876217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 19833942 - 19833829
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||| |  ||||||||| ||||||  ||||| ||||||||| ||||||| |      
T  19833942 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcatctttttctcctaactgaaaacactgatcagaagcagatagagtacca 19833844  T
Q  218 cttctgaagtgatgt 232  Q
    | |||||||||||||    
T  19833843 cctctgaagtgatgt 19833829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 25593269 - 25593383
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| ||||||||||| || ||||   |||||||| |||||||||||  |||||  ||||| ||||||||||||||||||  |    
T  25593269 tgaaggtgagaaaaacacaag-ggggggttgaa-ttgtgttat-tttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttatg 25593365  T
Q  218 cttctgaagtgatgtcca 235  Q
    ||| ||||||||| ||||    
T  25593366 cttatgaagtgatttcca 25593383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 19623205 - 19623296
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||| |||||||||| |||||||||||  || ||  ||||| ||||||||||||||||| | ||||||||||||||||    
T  19623205 ggggggttgaa-ttatgttggctttttcttcgttttctcctaagctaaaaacactgatcagaagcaaatagagtcctgcttctgaagtgatgt 19623296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 9717018 - 9717135
Alignment:
Q  118 tctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||||||||||||||||||  ||| ||||| |||| ||||||| |||||||  ||||||||||   ||||  ||||| ||| ||||| |||||||    
T  9717018 tctgaaggtgagaaaaacacaagaaggggaggttg-aattgtgtttgcattttcttctttttctcctaagttgaaaacactgatcaaaagcagatagagt 9717116  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||||||||||    
T  9717117 tccacttctgaagtgatgt 9717135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 16332923 - 16333038
Alignment:
Q  119 ctgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||| ||||||| ||||||||||| || |||| ||||||||||  |||||||||| |||||   || | ||||||||| |||||||||    
T  16332923 ctgaaggtgagaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctcctaactgaaaatacagatcagaagcagatagagttc 16333021  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  16333022 tacttctgaagtgatgt 16333038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 16528511 - 16528624
Alignment:
Q  122 aaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||  ||||||||| |||| |||| |||||||||| |||||||||||   ||||  ||||| | ||||||| |||||||||      
T  16528511 aaggtgagaaaaacacaagaagggggggttg-aattgtgttagctttttcttcgttttctcctaagttgaaaacactgataagaagcagatagagttcta 16528609  T
Q  218 cttctgaagtgatgt 232  Q
     ||||||||||||||    
T  16528610 tttctgaagtgatgt 16528624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 19624971 - 19625073
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcct--actgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||| |||| |||| |||||||||| |||||| |||  |||||| ||||  ||||||| |  ||||||||||    
T  19624971 tgaaggtgagaaaaacacaagacggggggttg-aattatgttagctttttcttcgttttcacctaaactgaaatcacacttcagaacctgatagagttca 19625069  T
Q  217 gctt 220  Q
    ||||    
T  19625070 gctt 19625073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 17926995 - 17927050
Alignment:
Q  174 ttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 229  Q
    ||||||| ||| |||||||||||||||||||| |||||||||| ||||||| ||||    
T  17926995 ttttctcttaccgaagtcactgttcagaagcagatagagttcaacttctgatgtga 17927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 24116013 - 24116127
Alignment:
Q  121 gaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctac--tgaagt-cactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||| ||||||  |||||  | |||| |||||||||| |||||||||||   ||||   ||||| |||||||||||||||||||    
T  24116013 gaaggtgagaaaaacacaaggggggggggttgaa--tgtgttggctttttcttcgttttctcctaagttgaaaaacactggtcagaagcaaatagagttc 24116110  T
Q  216 agcttctgaagtgatgt 232  Q
     ||||||||||| ||||    
T  24116111 tgcttctgaagtaatgt 24116127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 20113565 - 20113473
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcact-gttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || ||||||||||||||| |||||||||||  |||||  |||| | ||||||||| |||||||||  |||||||||||||||    
T  20113565 ggggggttgaa-ttgtgtttgctttttcttcgttttctcctaagctgaaaacacttgatcagaagcagatagagttctacttctgaagtgatgt 20113473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 21234350 - 21234465
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| ||||||  ||||||||||| || |||| |||||||| |  ||||||||||  |||||  ||||| ||||||||| ||||| |||    
T  21234350 tgaaggtgagaaaaatacaagaatggggggttgaa-ttgtgttagctttttcctctttttctcctaagctgaaaacactgatcagaagcagatagaattc 21234448  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  21234449 tacttctgaagtgatgt 21234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 32756750 - 32756806
Alignment:
Q  114 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  32756750 agaatctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 32756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 14733045 - 14732952
Alignment:
Q  143 gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    |||||||||| || |||| |||||||||| |||||||||||  || ||  ||||| |||||| |||||||||||  |||||||||||||| ||||    
T  14733045 gggggttgaa-ttgtgttagctttttcttcgttttctcctaagctaaaaacactgatcagaaacaaatagagttatgcttctgaagtgatttcca 14732952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 147
Target Start/End: Complemental strand, 10972399 - 10972370
Alignment:
Q  118 tctgaaggtgagaaaaacacaagagggggg 147  Q
    ||||||||||||||||||||||||||||||    
T  10972399 tctgaaggtgagaaaaacacaagagggggg 10972370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 11021309 - 11021363
Alignment:
Q  117 atctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  11021309 atctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 11021363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 16124381 - 16124326
Alignment:
Q  115 gaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||| ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  16124381 gaatatgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 16124326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Complemental strand, 16266271 - 16266243
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagggggg 147  Q
    |||||||||||||||||||||||||||||    
T  16266271 ctgaaggtgagaaaaacacaagagggggg 16266243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 25787046 - 25787074
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagggggg 147  Q
    |||||||||||||||||||||||||||||    
T  25787046 ctgaaggtgagaaaaacacaagagggggg 25787074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 31571766 - 31571820
Alignment:
Q  117 atctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  31571766 atctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 31571820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 41122583 - 41122473
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| || |||||||| || ||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  41122583 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgtttactttttcttcgttttctcctactgaagtcactgatcagaagcagatagagttcagc 41122485  T
Q  219 ttctgaagtgat 230  Q
    ||||||||||||    
T  41122484 ttctgaagtgat 41122473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 23185233 - 23185123
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 219  Q
    ||||||| ||||||||||||| ||||||||||| || |||| ||||||||||  ||||||||||||||||||| || ||||||||| |||||||||| ||    
T  23185233 tgaaggtaagaaaaacacaag-ggggggttgaa-ttgtgttagctttttcttctttttctcctactgaagtcattgatcagaagcagatagagttcaact 23185136  T
Q  220 tctgaagtgatgt 232  Q
    |||||||||||||    
T  23185135 tctgaagtgatgt 23185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 23596496 - 23596386
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 219  Q
    ||||||| ||||||||||||| ||||||||||| || |||| ||||||||||  ||||||||||||||||||| || ||||||||| |||||||||| ||    
T  23596496 tgaaggtaagaaaaacacaag-ggggggttgaa-ttgtgttagctttttcttctttttctcctactgaagtcattgatcagaagcagatagagttcaact 23596399  T
Q  220 tctgaagtgatgt 232  Q
    |||||||||||||    
T  23596398 tctgaagtgatgt 23596386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 22271293 - 22271401
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 219  Q
    ||||||||||||||||| |   |||||| |  |||| ||||| ||||||||| | ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  22271293 tgaaggtgagaaaaacata---ggggggattgaattgtgtttactttttcttcgatttctcctactgaagtcactgatcataagcagatagagttcagct 22271389  T
Q  220 tctgaagtgatg 231  Q
    ||||||||||||    
T  22271390 tctgaagtgatg 22271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 24851578 - 24851463
Alignment:
Q  119 ctgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||| || |||||||| || ||||||||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||    
T  24851578 ctgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgtttgctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttc 24851480  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  24851479 tacttctgaagtgatgt 24851463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 28702129 - 28702015
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| |||||||||||||||||||     
T  28702129 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcaaatagagttct 28702031  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  28702030 acttctgaagtgatgt 28702015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 40780504 - 40780618
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| || |||||||| || |||| | |||||||| |||||||||||  |||||  ||||| |||||||||||||||||||     
T  40780504 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgttagttttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttct 40780602  T
Q  217 gcttctgaagtgatgt 232  Q
    ||||||||||||||||    
T  40780603 gcttctgaagtgatgt 40780618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 24724093 - 24724168
Alignment:
Q  157 tgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||| ||||||||| |||||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||    
T  24724093 tgttttctttttcttcgttttctcctactgaaatcattggtcagaagcagatagagttcagcttctgaagtgatgt 24724168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 24778525 - 24778640
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  ||||||||||| || |||| |||||||||| |||| ||||||  |||||  ||||| ||||||||||||||||||     
T  24778525 tgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttggctttttcttcgtttactcctaagctgaaaacactgatcagaagcaaatagagtta 24778623  T
Q  216 agcttctgaagtgatgt 232  Q
     ||||||||||||||||    
T  24778624 tgcttctgaagtgatgt 24778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 20569652 - 20569537
Alignment:
Q  122 aaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||| ||||||||||| || ||||  ||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||  ||    
T  20569652 aaggtgagaaaaacacaagaaggggggttgaa-ttgtgttaactttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttatgc 20569554  T
Q  219 ttctgaagtgatgtcca 235  Q
    |||||||||||| ||||    
T  20569553 ttctgaagtgatttcca 20569537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 26623330 - 26623262
Alignment:
Q  164 tttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  26623330 tttttcttcgttttctcctacttaagtcactgttcagaagcagatagaattcaccttctgaagtgatgt 26623262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 22455866 - 22455750
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    |||||||||||||||||||||||  ||||||||||| || |||| |||||||||| |||||||||||  || ||  ||||| ||||||||| ||||||||    
T  22455866 ctgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctcaaaacactgatcagaagcagatagagtt 22455768  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  22455767 ctacttctgaagtgatgt 22455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 25188600 - 25188711
Alignment:
Q  121 gaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagc 218  Q
    ||||||||||||| ||||||||||||| |||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||  |    
T  25188600 gaaggtgagaaaa-cacaagagggggggtgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttccac 25188697  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  25188698 ttctgaagtgatgt 25188711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 24575226 - 24575344
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  |  |||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||||||||||||     
T  24575226 tgaaggtgagaaaaacacaagaatgaagggttgaa-ttgtgttagctttttcttcattttctcctaagctgaaaacactgatcagaagcaaatagagttt 24575324  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||||||||||||| ||||    
T  24575325 tgcttctgaagtgatttcca 24575344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 39038545 - 39038431
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||| |||||| |||| |||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| ||||||||      
T  39038545 tgaaggtgagaaaaaaacaagaaggggagttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttat 39038447  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  39038446 acttctgaagtgatgt 39038431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 45087902 - 45087788
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| ||||| ||      
T  45087902 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagatttat 45087804  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  45087803 acttctgaagtgatgt 45087788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 17964208 - 17964091
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||| |||| ||||||||||| || ||||  ||||||||| |||||||||||  |||||  ||||| ||| || ||||||||||||     
T  17964208 tgaaggtgagaaaaacaaaagaaggggggttgaa-ttgtgttaactttttcttcgttttctcctaagctgaaaacactgatcataaacaaatagagttct 17964110  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||| ||||| ||||    
T  17964109 gcttctgaggtgatttcca 17964091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 22257383 - 22257501
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| |||||| |  |||| |||| ||||||||||  |||||||| |  |||||  ||||  ||||||||||||||||||      
T  22257383 tgaaggtgagaaaaacacaagaagggggggttcaattgtgttagctttttcttcattttctccaaagctgaaaacacttatcagaagcaaatagagttat 22257482  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||| ||||    
T  22257483 gcttctgaagtgatttcca 22257501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 25828352 - 25828466
Alignment:
Q  123 aggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 219  Q
    |||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||   | ||  ||||| ||||||||||||||| ||  |||    
T  25828352 aggtgagaaaaacacaagaaggggggttg-aattatgttagctttttcttcgttttctcctaaggtaaaaacactgatcagaagcaaatagatttatgct 25828450  T
Q  220 tctgaagtgatgtcca 235  Q
    ||| ||||||| ||||    
T  25828451 tctaaagtgatttcca 25828466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 31328878 - 31328783
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||  |||||||||| |||||  ||||||| ||||||| ||| ||||    
T  31328878 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttgttttttcttctttttctcctatctgaaaacactgtttagaagcagataaagtt 31328783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 31335599 - 31335504
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| ||||||||  |||||||||| |||||  ||||||| ||||||| ||| ||||    
T  31335599 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttgttttttcttctttttctcctatctgaaaacactgtttagaagcagataaagtt 31335504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 22189014 - 22188898
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    |||||||||||||||||||||||  ||||| ||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| ||| ||||    
T  22189014 ctgaaggtgagaaaaacacaagaacgggggattg-aattgtgttggttttttcttctttttctcctatgctgaaaacactgatcagaagcagatatagtt 22188916  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  22188915 ctacttctgaagtgatgt 22188898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 28551825 - 28551712
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||| | ||||||    | ||||||||||| |||||||||      
T  28551825 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttctttttctcataactgaaaatgcagttcagaagcagatagagttcta 28551727  T
Q  218 cttctgaagtgatgt 232  Q
    ||||||||| |||||    
T  28551726 cttctgaagagatgt 28551712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 19539641 - 19539717
Alignment:
Q  114 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagt 190  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  |||||| || |||||||    
T  19539641 agaatatgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcattttctacttctgaagt 19539717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 24838350 - 24838399
Alignment:
Q  183 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  24838350 actgaagtcactattcagaacctgatagagttcagcttctgaagtgatgt 24838399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 10010624 - 10010541
Alignment:
Q  151 aaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||| |||| | ||||| || |||||||||||  |||||  ||||| ||||||||||||||||||| |||||| |||||||||    
T  10010624 aaattgtgttagtttttttttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctgcttctaaagtgatgt 10010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 21538092 - 21537978
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||| |||||| ||  | |  |||| ||||||||||||||| |||||||| ||  |||||  || || | ||||||| |||||||||      
T  21538092 tgaaggtgagaaaaatacaagaaggaagattgaattgtgtttgctttttcttcgttttctcttaagctgaaaacattgattagaagcagatagagttcta 21537993  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  21537992 cttctgaagtgatgt 21537978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 22316797 - 22316846
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  22316797 tgaaggtgagaaaaacacaagaagggggttg-aattctgttagctttttct 22316846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 27294685 - 27294749
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| | |||||||| |||||||||||    
T  27294685 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgttagttttttcttcgttttctccta 27294749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 38040851 - 38040801
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  38040851 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 38040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 22763021 - 22763080
Alignment:
Q  112 gaagaatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 170  Q
    ||||| ||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  22763021 gaagattctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 22763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 22782536 - 22782472
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctac 184  Q
    ||||||||| |||||||||||| ||||||||||| || |||| ||||||||||  |||||||||||    
T  22782536 tgaaggtgataaaaacacaagaaggggggttgaa-ttgtgttagctttttcttctttttctcctac 22782472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 20567415 - 20567443
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagggggg 147  Q
    |||||||||||||||||||||||||||||    
T  20567415 ctgaaggtgagaaaaacacaagagggggg 20567443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 24450356 - 24450305
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 171  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  24450356 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttctt 24450305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 2675 - 2586
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2675 ggggggttgaa-ttgtgtttgctttttcttcgttttctcctactgaagtcactgttcagaagcagatagagttcagcttctgaagtgatgt 2586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 13191 - 13303
Alignment:
Q  120 tgaaggtgagaaaaacac-aagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||| || |||||||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |    
T  13191 tgaaggtgagaaaaacacaaaaaggggggttg-aattgtgttagctttttcttcgttttctcctactgaagtcactgatcagaagcagatagagttcaac 13289  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  13290 ttctgaagtgatgt 13303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 21199953 - 21199846
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| ||||||||||| || |||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |    
T  21199953 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactgatcagaagcagatagagttcaac 21199855  T
Q  219 ttctgaagt 227  Q
    |||||||||    
T  21199854 ttctgaagt 21199846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 25097981 - 25097871
Alignment:
Q  122 aaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagctt 220  Q
    |||||||||||||||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||| | |||| ||||||||| ||||| ||||||||    
T  25097981 aaggtgagaaaaacacaagaagggtggttgaa-ttatgtttgctttttcttcgttttctcctactgaaataactgatcagaagcagatagatttcagctt 25097883  T
Q  221 ctgaagtgatgt 232  Q
    ||||||||||||    
T  25097882 ctgaagtgatgt 25097871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 25157073 - 25156963
Alignment:
Q  122 aaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagctt 220  Q
    |||||||||||||||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||| | |||| ||||||||| ||||| ||||||||    
T  25157073 aaggtgagaaaaacacaagaagggtggttgaa-ttatgtttgctttttcttcgttttctcctactgaaataactgatcagaagcagatagatttcagctt 25156975  T
Q  221 ctgaagtgatgt 232  Q
    ||||||||||||    
T  25156974 ctgaagtgatgt 25156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 22000969 - 22000855
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||  || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||      
T  22000969 tgaaggtgagaaaaacacaagaaggggggttgag-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttat 22000871  T
Q  217 gcttctgaagtgatgt 232  Q
    ||||||||| ||||||    
T  22000870 gcttctgaaatgatgt 22000855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 21207726 - 21207636
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||  |||| |||| |||| ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||| |||| ||||||    
T  21207726 ggggggtttgaattgtgttagcttcttcttcgttttctccttctgaagtcactgatcagaagcagatagagttcagcttatgaaatgatgt 21207636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 6513373 - 6513255
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| ||  |||||||| || |||| |||||||||| |||||||| ||  |||||  ||||| ||| |||||||||||||||    
T  6513373 tgaaggtgagaaaaacacaagaaggaggggttgaa-ttgtgttggctttttcttcgttttctcttaagctgaaaacactgatcataagcaaatagagttc 6513275  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||||||||||||| ||||    
T  6513274 tgcttctgaagtgatttcca 6513255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 7746639 - 7746524
Alignment:
Q  120 tgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| ||||| | ||||||||||| || ||||||||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||    
T  7746639 tgaaggtgagaaaaaacacaataaggggggttgaa-ttgtgtttgctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttc 7746541  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  7746540 tacttctgaagtgatgt 7746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 90375 - 90261
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctg-aagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||||  | ||||| |||| |||| |||||||||| |||||||||||  ||| ||  ||||| |||||||||||||||||||     
T  90375 tgaaggtgagaaaaacacaagaatgaggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaaacactgatcagaagcaaatagagttct 90277  T
Q  217 gcttctgaagtgatgt 232  Q
    ||||| ||||||||||    
T  90276 gcttccgaagtgatgt 90261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 31487403 - 31487517
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| | |||||||| |||||||||||  |||||  ||||| |||||||||||||||||||     
T  31487403 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggttttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttct 31487501  T
Q  217 gcttctgaagtgatgt 232  Q
      || |||||||||||    
T  31487502 aattttgaagtgatgt 31487517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 6498511 - 6498623
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||| ||||||||||| |||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| | ||||||| |||||||||      
T  6498511 tgaaggtgagtaaaacacaaga-gggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgattagaagcagatagagttcta 6498608  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  6498609 cttctgaagtgatgt 6498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 19546471 - 19546358
Alignment:
Q  118 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||| |  |||||||||| || |||| | |||||||| |||| ||||||  |||||| ||||| ||||||||||||| ||||     
T  19546471 tctgaaggtgagaaaaacacagg--gggggttgaa-ttgtgttggttttttcttcgtttcctcctaagctgaagacactgatcagaagcaaatatagtta 19546375  T
Q  216 agcttctgaagtgatgt 232  Q
     ||||||||||||||||    
T  19546374 tgcttctgaagtgatgt 19546358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 30116816 - 30116702
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| ||||||| | ||||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| ||||||||| |    
T  30116816 tgaaggtgagaaaaacacaagaagggggggttaaattctgttggctttttcttctttttctcctaactgaaaatacagatcagaagcagatagagttctg 30116717  T
Q  218 cttctgaagtgatgt 232  Q
    ||||||||| |||||    
T  30116716 cttctgaagagatgt 30116702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 3246403 - 3246291
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||| |||||| | || | ||||||||| |||||||||      
T  3246403 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaactgaaat-acagatcagaagcagatagagttcta 3246306  T
Q  218 cttctgaagtgatgt 232  Q
    ||||||||| |||||    
T  3246305 cttctgaagagatgt 3246291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 21076125 - 21076011
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||| ||||||||||||||||| || |||||||| || |||| |||||||||| |||||||||||  ||||   ||||| ||||||||| || ||||||     
T  21076125 tgaatgtgagaaaaacacaagaaggagggttgaa-ttatgttagctttttcttcgttttctcctaagctgataacactgatcagaagcagattgagttct 21076027  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  21076026 acttctgaagtgatgt 21076011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 21100692 - 21100578
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||| |||||| |||||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  21100692 tgaaggtgagaaaagcacaagaaggggggttg-aattgtgttagttttttcttcattttctcctaagctgaaaacactgatcagaagcagatagagttcc 21100594  T
Q  217 gcttctgaagtgatgt 232  Q
     ||| |||||||||||    
T  21100593 acttttgaagtgatgt 21100578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 23413913 - 23413804
Alignment:
Q  126 tgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    ||||||||||||||||  |||| |||||| || |||| |||||||||| |||||||||||  |||||  |||||  |||||| ||||||||||| ||||     
T  23413913 tgagaaaaacacaagaatggggagttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgaccagaagtaaatagagttctgcttt 23413815  T
Q  222 tgaagtgatgt 232  Q
    |||||||||||    
T  23413814 tgaagtgatgt 23413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 11993107 - 11993197
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||||||||||||||  |||||||||| || ||  ||||| |||| |||| ||||||||| ||||||||||||||||    
T  11993107 ggggggttgaa-ttgtgtttgctttttcttctttttctcctaactaaaaacactgatcaggagcagatagagttctgcttctgaagtgatgt 11993197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 13546471 - 13546355
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagggg--ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||| | |  ||||||| || ||||| ||||||||| ||||||| |||  |||||  || || ||||||||| ||||||||    
T  13546471 ctgaaggtgagaaaaacacaagaagagtgggttgaa-ttgtgtttactttttcttcgttttcttctaagctgaaaacaatgatcagaagcagatagagtt 13546373  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  13546372 ctacttctgaagtgatgt 13546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 28465287 - 28465225
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||| |||||||||||||| |||||||| |||| |||| ||||||||||| ||||||||||    
T  28465287 tgaaggtaagaaaaacacaagaagggggttg-aattgtgttggctttttcttttttttctccta 28465225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 33932460 - 33932576
Alignment:
Q  120 tgaaggtgag-aaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    |||||||||| ||||||||||||  ||||||||||| || |||| ||||||||||| |||||| |||  |||||  ||||| ||||||||||||||| ||    
T  33932460 tgaaggtgaggaaaaacacaagaagggggggttgaa-ttgtgttggctttttcttttttttcttctaagctgaaaacactgatcagaagcaaatagattt 33932558  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||| ||||||    
T  33932559 ctacttctgaaatgatgt 33932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 35932950 - 35932834
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtca-ctgttcagaagcaaatagagtt 214  Q
    |||||||||||||||||||||||  ||| ||||| |||| |||| ||||||||||  |||||||||| ||||| | | | ||||||||||| ||||||||    
T  35932950 ctgaaggtgagaaaaacacaagaaggggaggttg-aattgtgttagctttttcttctttttctcctatctgaaataagcagttcagaagcagatagagtt 35932852  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  ||||||||| |||||    
T  35932851 ctacttctgaagagatgt 35932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 37395362 - 37395476
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  | ||||||||  |||||  ||||| | ||||||| ||||| |||     
T  37395362 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttactttttcttcttcttctcctaagctgaaaacactgattagaagcagatagaattct 37395460  T
Q  217 gcttctgaagtgatgt 232  Q
      ||||||||||||||    
T  37395461 atttctgaagtgatgt 37395476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 26120760 - 26120710
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctt 171  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||    
T  26120760 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttagctttttctt 26120710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 30742135 - 30742248
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| |||||||| |||| ||||  |||||||||  ||||||   |  |||||  ||||| ||||||||| ||| |||||      
T  30742135 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttgactttttcttctttttctttaaagctgaaaacactgatcagaagcagatatagttcta 30742233  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  30742234 cttctgaagtgatgt 30742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 9399557 - 9399440
Alignment:
Q  119 ctgaaggtgagaaaaacacaag--aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||  ||| |||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||  ||||||||| ||||| ||    
T  9399557 ctgaaggtgagaaaaacacaagaaaggagggttg-aattgtgttagttttttcttcattttctcctaagctgaaaacactaatcagaagcagatagaatt 9399459  T
Q  215 cagcttctgaagtgatgtc 233  Q
    |   |||||||||||||||    
T  9399458 ctatttctgaagtgatgtc 9399440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 33021844 - 33021895
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||||| |||| |||| |||||||||    
T  33021844 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttct 33021895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 19889899 - 19889782
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||||||  |||||  ||||| | |||||||||||||||||     
T  19889899 tgaaggtgagaaaaacacaagaaggggggttgaa-ttttgttagctttttcttcgttttctcctaagctgaaaacactgattagaagcaaatagagttct 19889801  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||||||||    
T  19889800 gcttctgaagtgatgtcca 19889782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 12967511 - 12967622
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| |||||  ||||| || |||| |||||||||| |||||||||| ||||||||||| |||||| | ||||||| |||||    
T  12967511 tgaaggtgagaaaaacacaagaagggggagttgaa-ttgtgttagctttttcttcgttttctcctgctgaagtcactattcagaggaaaatagaattcag 12967609  T
Q  218 cttctgaagtgat 230  Q
    |||||||||||||    
T  12967610 cttctgaagtgat 12967622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 19250349 - 19250236
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagg-ggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||||| | ||||||||| || |||| |||||| ||| ||||||||||||||||||||||  ||| ||||| |||||||||      
T  19250349 ctgaaggtgagaaaaacacaagaagaggggttgaa-ttgtgttagcttttacttcgttttctcctactgaagtcactaatcaaaagcagatagagttcca 19250251  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  19250250 cttctgaagtgatgt 19250236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 26418658 - 26418569
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||| | |||||||||||||||    
T  26418658 ggggggttgaa-ttgtgtttgctttttcttcgttttctcctactgaagtcactgttaaaaagcagatagagttgaacttctgaagtgatgt 26418569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 6252657 - 6252712
Alignment:
Q  174 ttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 229  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6252657 ttttctcctactgaagtcactgttcagaagcagatagagttcagcttctgaagtga 6252712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 14310877 - 14310987
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    ||||||||| ||||| |||||| ||| ||||||| || |||||  |||||||| |||||||||||||||| |||||| ||||||||| ||||||| ||||    
T  14310877 tgaaggtgacaaaaatacaagaagggaggttgaa-ttgtgttttatttttcttcgttttctcctactgaaatcactgatcagaagcagatagagtccagc 14310975  T
Q  219 ttctgaagtgat 230  Q
    ||||||||||||    
T  14310976 ttctgaagtgat 14310987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 15902393 - 15902509
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||| ||||||| ||||| |    
T  15902393 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttagctttttcttctttttctcctaagctgaaaacactgatcagaggcaaataaagttctg 15902491  T
Q  218 cttctgaagtgatgtcca 235  Q
    ||||||||||||| ||||    
T  15902492 cttctgaagtgatttcca 15902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 14063999 - 14063890
Alignment:
Q  122 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    ||||||||||||||||||||  ||||||||| || ||||  | ||||||||||||||||||||||||||||| | ||| ||| | | ||||||| |||||    
T  14063999 aaggtgagaaaaacacaagaaaggggttgaa-ttgtgttaacattttctttgttttctcctactgaagtcaccgatcaaaagtagaaagagttccgcttc 14063901  T
Q  222 tgaagtgatgt 232  Q
    ||| |||||||    
T  14063900 tgatgtgatgt 14063890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 6174498 - 6174599
Alignment:
Q  124 ggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttct 222  Q
    |||||||||||||||||| ||||||||||  | | |||| ||||||||||    ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  6174498 ggtgagaaaaacacaagaaggggggttgagttgtggttt-ctttttcttt----tctcctattgaagtcactgttcagaagcagatagagttcagcttct 6174592  T
Q  223 gaagtga 229  Q
     ||||||    
T  6174593 aaagtga 6174599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 23539185 - 23539073
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| ||| ||||||| || |||| | |||||||| ||||| ||||| ||||||||||  ||| ||||| ||||| ||||||    
T  23539185 tgaaggtgagaaaaacacaagaagggaggttgaa-ttgtgttagttttttcttcgttttttcctaatgaagtcactagtcaaaagcagatagaattcagc 23539087  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||| ||||||    
T  23539086 ttctgaaatgatgt 23539073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 6089925 - 6090039
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||| ||||| |||| |||| |||||||| | |||||||||||  |||||  ||||| ||||||||| |||||||||     
T  6089925 tgaaggtgagaaaaacacaagaagggaggttg-aattgtgttagctttttcatcgttttctcctaagctgaaaacactgatcagaagcagatagagttct 6090023  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  6090024 acttctgaagtgatgt 6090039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 14954607 - 14954721
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  14954607 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttct 14954705  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||| ||||    
T  14954706 acttctgaagtaatgt 14954721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 19886038 - 19885924
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||| | ||||||||||||| | |||  ||||||||| |||||||||||  |||||  ||||  |||||||||||||||||||     
T  19886038 tgaaggtgagaaaaacacaaaaaggggggttgaaatgt-gttatctttttcttcgttttctcctaagctgaaaacacttatcagaagcaaatagagttct 19885940  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  19885939 acttctgaagtgatgt 19885924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 29952400 - 29952283
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg----ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||| ||||||||||||||||||    ||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||    
T  29952400 tgaaggtgacaaaaacacaagaggggggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagt 29952302  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||||||||||    
T  29952301 tctacttctgaagtgatgt 29952283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 30001554 - 30001437
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg----ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||| ||||||||||||||||||    ||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||    
T  30001554 tgaaggtgacaaaaacacaagaggggggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagt 30001456  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||||||||||    
T  30001455 tctacttctgaagtgatgt 30001437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 12727196 - 12727082
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| || |||||||| || |||| ||||||| || |||||||||||  |||||  ||||| ||||||||| ||||| |||     
T  12727196 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgttagcttttttttcgttttctcctaagctgaaaacactgatcagaagcagatagaattct 12727098  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  12727097 acttctgaagtgatgt 12727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 40799085 - 40799201
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggg---ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    |||||||||||||||||||||| |||   ||||||| || ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| ||||||||    
T  40799085 tgaaggtgagaaaaacacaagaagggtggggttgaa-ttgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagtt 40799183  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  40799184 ctacttctgaagtgatgt 40799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 8875086 - 8874971
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| ||  |||||||| || |||| | |||||||| ||||| |||||  |||||  ||||| ||||||||||||| ||||     
T  8875086 tgaaggtgagaaaaacacaagaaggaggggttgaa-ttgtgttggttttttcttcgttttttcctaagctgaaaacactgatcagaagcaaataaagttt 8874988  T
Q  216 agcttctgaagtgatgt 232  Q
     ||||||||||||||||    
T  8874987 tgcttctgaagtgatgt 8874971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 14393956 - 14393841
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| |||||| |||||  ||||| || |||| |||||||||| |||||||||||   ||||  ||||| ||||||| |||||||||||    
T  14393956 tgaaggtgagaaaaatacaagaagggggcgttgaa-ttgtgttagctttttcttcgttttctcctaagttgaaaacactgatcagaagaaaatagagttc 14393858  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  14393857 tacttctgaagtgatgt 14393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 20724298 - 20724348
Alignment:
Q  182 tactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  20724298 tactgaagtcactgatcagaagcagatagatttcagcttctgaagtgatgt 20724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 52282991 - 52283106
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  ||||||||||| || ||||  |||||| ||  ||||||||||  |||||  ||||| ||||||||| |||||||||    
T  52282991 tgaaggtgagaaaaacacaagaagggggggttgaa-ttgtgttgactttttattctttttctcctaagctgaaaacactgatcagaagcagatagagttc 52283089  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  52283090 tacttctgaagtgatgt 52283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 17667566 - 17667676
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||| ||||  ||||||||||| || |||| | ||||||||  ||||||||||  |||||  ||||| ||| |||||||||||||||    
T  17667566 tgaaggtgagaaaaacaaaagaacggggggttgaa-ttgtgttagttttttcttcattttctcctaagctgaaaacactgatcataagcaaatagagttc 17667664  T
Q  216 agcttctgaagt 227  Q
     |||||||||||    
T  17667665 tgcttctgaagt 17667676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 49643725 - 49643607
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg--gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||| |||||||||||||||| | ||  |||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||| |||||||||||||||    
T  49643725 tgaagatgagaaaaacacaagaagcggaggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcaaaagcaaatagagttc 49643627  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||| ||||||||| ||||    
T  49643626 tgcttatgaagtgatttcca 49643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 1242035 - 1241921
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| || ||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| ||||| |||     
T  1242035 tgaaggtgagaaaaacacaagaagtggggttg-aattgtgttggttttttcttctttttctcctaagctgaaaacactgatcagaagcagatagatttct 1241937  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  1241936 acttctgaagtgatgt 1241921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 12221300 - 12221368
Alignment:
Q  164 tttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||| |||||| ||||||||||||| || ||||||||| ||| ||||||||||||  ||||||||    
T  12221300 tttttcttcgttttcgcctactgaagtcattgatcagaagcagatatagttcagcttctatagtgatgt 12221368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 49554470 - 49554356
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||| || ||||||||||| || |||| | ||||||||  ||||||||||  |||||  || || ||||||||| |||||||||     
T  49554470 tgaaggtgagaaaaacacacgaaggggggttgaa-ttgtgttggttttttcttctttttctcctaagctgaaaacattgatcagaagcagatagagttct 49554372  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  49554371 acttctgaagtgatgt 49554356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 2560383 - 2560496
Alignment:
Q  121 gaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||| |||||||||| |||| ||||| ||||||||| || ||||||||  | |||  ||||| | ||||||| |||||||||      
T  2560383 gaaggtgagaaaaacacaagaaggggggttg-aattgtgtttactttttcttcgtcttctcctaagccgaaaacactgataagaagcagatagagttcta 2560481  T
Q  218 cttctgaagtgatgt 232  Q
    ||| |||||||||||    
T  2560482 cttttgaagtgatgt 2560496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 16031701 - 16031814
Alignment:
Q  121 gaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| | | ||||||| || || || |||||||||  ||||||||||  ||||| | |||| |||||||||||||||||||      
T  16031701 gaaggtgagaaaaacacaagaagagaggttgaa-ttgtgatttctttttcttctttttctcctaagctgaaattactgatcagaagcaaatagagttcca 16031799  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||| ||||    
T  16031800 cttctgaagtaatgt 16031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 22465439 - 22465377
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||||||||||||||||| ||||||||| |||| |||| ||||||||||  ||||||||||    
T  22465439 tgaaggtgagaaaaacacaaggggggggttg-aattgtgttagctttttcttccttttctccta 22465377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 52919622 - 52919735
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| ||||| || |||| |||| | |||||||| |||||||||||  |||||  ||||| ||| ||||| |||||||||      
T  52919622 tgaaggtgagaaaaacacaagaagggggctg-aattgtgttagttttttcttcgttttctcctaagctgaaaacactgatcacaagcagatagagttcta 52919720  T
Q  218 cttctgaagtgatgt 232  Q
     || |||||||||||    
T  52919721 tttttgaagtgatgt 52919735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 12964046 - 12963934
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct--actgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| ||| |||||| |||| |||| ||||||||||  |||||||||   |||||  ||||| | |||||||||||||||||     
T  12964046 tgaaggtgagaaaaacacaagaaggagggttg-aattgtgttagctttttcttcattttctcctcagctgaaaacactgataagaagcaaatagagttct 12963948  T
Q  217 gcttctgaagtgat 230  Q
    ||||  ||||||||    
T  12963947 gcttacgaagtgat 12963934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 14968561 - 14968680
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg------ttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaataga 211  Q
    |||||||||||||||||||||| |||||      ||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||    
T  14968561 tgaaggtgagaaaaacacaagaaggggggaggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagataga 14968659  T
Q  212 gttcagcttctgaagtgatgt 232  Q
    ||||  |||||||||||||||    
T  14968660 gttctacttctgaagtgatgt 14968680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 17239883 - 17239775
Alignment:
Q  126 tgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttct 222  Q
    ||||||||||| ||||  |||||||||| || |||| |||||||||| |||||||||||  |||||  || || ||| ||||||||||||||| |||| |    
T  17239883 tgagaaaaacataagaatgggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacaatgatcaaaagcaaatagagttctgctttt 17239785  T
Q  223 gaagtgatgt 232  Q
    ||||||||||    
T  17239784 gaagtgatgt 17239775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 21639237 - 21639128
Alignment:
Q  124 ggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    ||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||  ||||    
T  21639237 ggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttttctcctaactgaaaatacagatcagaagcagatagagttctacttc 21639139  T
Q  222 tgaagtgatgt 232  Q
    ||||| |||||    
T  21639138 tgaagagatgt 21639128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 13939116 - 13939210
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||||||||| || |||| ||||||||||||||||||||||  |||||  ||||  ||||||||||||||| ||| |||||| || |||| ||||    
T  13939116 ggggggttgaa-ttgtgttagctttttctttgttttctcctaagctgaaaacactaatcagaagcaaatagatttctgcttctaaattgatttcca 13939210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 22804980 - 22804867
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  ||| |||||||   ||||| | |||||||| |||||||||||   ||||  ||||| ||||||||| |||||||||    
T  22804980 tgaaggtgagaaaaacacaagaaggggaggttgaa---ttgttagttttttcttcgttttctcctaagttgaaaacactgatcagaagcagatagagttc 22804884  T
Q  216 agcttctgaagtgatgt 232  Q
      ||| |||||||||||    
T  22804883 tacttttgaagtgatgt 22804867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 2025292 - 2025397
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| ||||||||   ||||||||| ||||||    | ||||||||||| |||||||||     
T  2025292 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct---ttttctcctaactgaaaatgcagttcagaagcagatagagttct 2025387  T
Q  217 gcttctgaag 226  Q
     |||||||||    
T  2025388 acttctgaag 2025397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 11189191 - 11189304
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| ||| |||| |||| |||| | ||||||||  ||||||||||   ||||  ||||| ||||||| | |||||||||      
T  11189191 tgaaggtgagaaaaacacaagaagggtgttg-aattgtgttggttttttcttctttttctcctaagatgaaaacactgatcagaagaagatagagttcta 11189289  T
Q  218 cttctgaagtgatgt 232  Q
    ||| |||||||||||    
T  11189290 cttatgaagtgatgt 11189304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 38194117 - 38194174
Alignment:
Q  114 agaatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  38194117 agaatctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 38194174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 41494200 - 41494312
Alignment:
Q  120 tgaaggtgagaaaaacacaagagg-ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||| ||||||||||| | ||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||| |||||||||||     
T  41494200 tgaaggtgagcaaaacacaagaagcggggttgaa-ttgtgttggctttttcttc-ttttctcctaagctgaaaacactgatcagaagtaaatagagttct 41494297  T
Q  217 gcttctgaagtgatg 231  Q
      |||||||||||||    
T  41494298 atttctgaagtgatg 41494312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 11073624 - 11073673
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  11073624 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctttttct 11073673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 29854607 - 29854721
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg--gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| ||||  |||||| || |||| ||||||||||  ||||||||||  |||||  ||| | ||||||||| |||||||||    
T  29854607 tgaaggtgagaaaaacacaagaaggggaggttgaa-ttgtgttagctttttcttctttttctcctaaactgaaaacac-gatcagaagcagatagagttc 29854704  T
Q  216 agcttctgaagtgatgt 232  Q
      | |||||||||||||    
T  29854705 tacatctgaagtgatgt 29854721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 41044900 - 41044950
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  41044900 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 41044950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 152
Target Start/End: Original strand, 16881443 - 16881476
Alignment:
Q  119 ctgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    ||||||||||||||||||||||| ||||||||||    
T  16881443 ctgaaggtgagaaaaacacaagaagggggttgaa 16881476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 17960803 - 17960855
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  17960803 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 17960855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 19888187 - 19888135
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  19888187 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 19888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 31302547 - 31302657
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||| |||||| |||||||||| |||| |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  31302547 tgaaggtgagaaaa-cacaagaaggggggttg-aattgtgttggttttttcttctttttctcctatgctgaaaacactgatcagaagcagatagagttct 31302644  T
Q  217 gcttctgaagtga 229  Q
     ||||| ||||||    
T  31302645 acttctaaagtga 31302657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 38178606 - 38178491
Alignment:
Q  120 tgaaggtgagaaaaa-cacaagaggg-gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| || |||| || |||||||| || |||| ||||||||||  ||||||||||  |||||  ||||  ||||||||| |||||||||    
T  38178606 tgaaggtgagaaaaaacataagaaggagggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactaatcagaagcagatagagttc 38178508  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  38178507 ttcttctgaagtgatgt 38178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 3237890 - 3237941
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||||| |||| |||| |||||||||    
T  3237890 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttct 3237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 14006879 - 14006911
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    |||||||||||||||||||||| ||||||||||    
T  14006879 tgaaggtgagaaaaacacaagaagggggttgaa 14006911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 16199983 - 16199932
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcact 194  Q
    ||||||||||| || |||| |||||||||| |||||||||||||||| |||||    
T  16199983 ggggggttgaa-ttgtgttggctttttcttcgttttctcctactgaaatcact 16199932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 17910838 - 17910787
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  17910838 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 17910787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 20628398 - 20628308
Alignment:
Q  143 gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||||| || |||| ||||||||||  ||||||||||  |||||  || || ||||||||| |||||||||  |||||||||||||||    
T  20628398 gggggttgaa-ttgtgttagctttttcttctttttctcctaagctgaaaacagtgatcagaagcagatagagttctacttctgaagtgatgt 20628308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 28165379 - 28165430
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  28165379 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 28165430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 28581292 - 28581355
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||||||||||||||||| | |||||||| |||| |||| ||||||||||  ||||||||||    
T  28581292 tgaaggtgagaaaaacacaagaatgggggttg-aattgtgttagctttttcttctttttctccta 28581355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 2403 - 2506
Alignment:
Q  129 gaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagt 227  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| || |||    
T  2403 gaaaaacacaagaaggggggttg-aattgtgtttgctttttctttgttttcttctactgaagtccctgatcagaagcagatagagttcagcttatgtagt 2501  T
Q  228 gatgt 232  Q
    |||||    
T  2502 gatgt 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 21192767 - 21192654
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||| |||||||||||||  ||||||||||| || |||  |||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  21192767 tgaaggtgcgaaaaacacaagaagggggggttgaa-ttgtgtaagctttttcttcgttttctcctactgaagtcactgatcataagcagatagagttcag 21192669  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||| ||||    
T  21192668 cttctgaagtcatgt 21192654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 17025884 - 17025772
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||| ||||||||||||||||| ||||||||||| || |||| | |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||      
T  17025884 tgaaagtgagaaaaacacaagaaggggggttgaa-ttgtgttagatttttctttgttttctcctacttaagtcactgatcagaagcagatagagttcaat 17025786  T
Q  219 ttctgaagtgatgt 232  Q
    |||| |||||||||    
T  17025785 ttctaaagtgatgt 17025772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 18614108 - 18614221
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||| ||   | |||||| |||| |||| |||||||||| ||||||||||||||||||||||| ||| ||||| |||||||||||    
T  18614108 tgaaggtgagaaaaacacaggaagtgagggttg-aattatgttagctttttcttcgttttctcctactgaagtcactgatcaaaagcagatagagttcag 18614206  T
Q  218 cttctgaagtgatgt 232  Q
    ||||||| |||||||    
T  18614207 cttctgatgtgatgt 18614221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 12625430 - 12625318
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg-gggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| || |||||||| || |||| | |||||||| ||||||||||| | ||||||||  ||||||||| |||||||||| |    
T  12625430 tgaaggtgagaaaaacacaagaaggagggttgaa-ttgtgttagttttttcttcgttttctcctattaaagtcactcatcagaagcagatagagttcaac 12625332  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  12625331 ttctgaagtgatgt 12625318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 7308986 - 7309099
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| |||||||||| |||| |||| | |||||||| |||||||||| ||||||  ||||| ||||||||||||||| ||| |    
T  7308986 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggttttttcttcgttttctcctaactgaaaacactgatcagaagcaaatagaattctg 7309084  T
Q  218 cttctgaagtgatgt 232  Q
    ||||| |||||||||    
T  7309085 cttctaaagtgatgt 7309099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 22202764 - 22202648
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||  |||||||||| || ||||  ||||||||| |||||||||||  |||||  ||||| ||| ||||||||||||||| |    
T  22202764 tgaaggtgagaaaaacacaaggagggggttgaa-ttgtgttatctttttcttcgttttctcctaaactgaaaacactgatcataagcaaatagagttctg 22202666  T
Q  218 cttctgaagtgatgtcca 235  Q
    ||||||| ||||| ||||    
T  22202665 cttctgacgtgatttcca 22202648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 30892260 - 30892374
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| | ||||| |||  |||||  ||||| |||||||||||||||||||     
T  30892260 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgatttcttctaagctgaaaacactgatcagaagcaaatagagttct 30892358  T
Q  217 gcttctgaagtgatgt 232  Q
     ||||| |||||||||    
T  30892359 acttctaaagtgatgt 30892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 14294166 - 14294052
Alignment:
Q  118 tctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||||| |||||||  |||| |||||||||||||||  ||||||||||  |||||  ||||| ||||||| | ||||||||     
T  14294166 tctgaaggtgagaaaaacacaagaagggggtt--aattgtgtttgctttttcttcattttctcctaagctgaaaacactgatcagaaggagatagagtta 14294069  T
Q  216 agcttctgaagtgatgt 232  Q
      ||||| |||||||||    
T  14294068 tacttctaaagtgatgt 14294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 25449469 - 25449357
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||| ||| ||  ||||||||| ||||||  ||||| ||||||||| ||||||||   |    
T  25449469 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctattttttctttttctcctaactgaaaacactgatcagaagcagatagagttatac 25449371  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  25449370 ttctgaagtgatgt 25449357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 22153017 - 22153135
Alignment:
Q  116 aatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct--actgaagtcactgttcagaagcaaatagag 212  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  |||||||||   |||||  |  || ||||||||| ||||||    
T  22153017 aatctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttttctccttagctgaaaactttgatcagaagcagatagag 22153115  T
Q  213 ttcagcttctgaagtgatgt 232  Q
    |||  |||||||||||||||    
T  22153116 ttctacttctgaagtgatgt 22153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 17017822 - 17017877
Alignment:
Q  174 ttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 229  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  17017822 ttttcttctactgaagtcactattcagaagctgatagagttcagcttctgaagtga 17017877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 21983792 - 21983908
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtca-ctgttcagaagcaaatagagtt 214  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||| |||||||||  |||||||||| ||||| | | | ||||||||||| ||||||||    
T  21983792 ctgaaggtgagaaaaacacaagaacggggggttg-aattgtgttttctttttcttctttttctcctatctgaaataagcagttcagaagcagatagagtt 21983890  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  ||||||||| |||||    
T  21983891 ctacttctgaagagatgt 21983908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 1577042 - 1577158
Alignment:
Q  118 tctgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||| | || ||||||||||| || |||| | ||||||||  ||||||| ||  |||||  ||||| ||||||||| ||||||||    
T  1577042 tctgaaggtgagaaaaacatacgaaggggggttgaa-ttgtgttggttttttcttctttttctcttatgctgaaaacactgatcagaagcagatagagtt 1577140  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  1577141 ctacttctgaagtgatgt 1577158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 12283590 - 12283700
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| ||  |||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||| |||||| ||||||||      
T  12283590 tgaaggtgagaaaaacacaagaaggatgttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactg-tcataagcaagtagagttctc 12283687  T
Q  218 cttctgaagtgat 230  Q
    |||||||| ||||    
T  12283688 cttctgaaatgat 12283700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 20959911 - 20959819
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    |||||||||||||||||||  |||||||||| |||| |||| | |||||||| |||||||||||  |||||  ||||| ||||||||| |||||||    
T  20959911 tgaaggtgagaaaaacaca--aggggggttg-aattgtgttagttttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagt 20959819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 22202600 - 22202526
Alignment:
Q  163 ctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||||||| |||||||||||  |||||  ||||| ||| ||||||||||||||| |||||||| ||||| ||||    
T  22202600 ctttttcttcgttttctcctaaactgaaaacactgatcataagcaaatagagttctgcttctgacgtgatttcca 22202526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 22428190 - 22428108
Alignment:
Q  152 aattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| ||||| ||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||  |||||||| ||||||    
T  22428190 aattgtgtttactttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaaatgatgt 22428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 2833856 - 2833965
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||| |||||    |||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||| ||      
T  2833856 tgaaggtgagaaacacaca----gggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagctcta 2833950  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  2833951 cttctgaagtgatgt 2833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 22637456 - 22637490
Alignment:
Q  118 tctgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    |||||||||||||||||||||||| ||||||||||    
T  22637456 tctgaaggtgagaaaaacacaagaagggggttgaa 22637490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 33257247 - 33257135
Alignment:
Q  125 gtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    |||||||||||||||| ||||| |||| |||| |||| |||||||||| | |||||||||  |||||  ||| | ||||||||||||| ||||  ||||     
T  33257247 gtgagaaaaacacaagaaggggagttg-aattgtgttagctttttcttcgctttctcctaagctgaaaacaccgatcagaagcaaatatagttatgcttt 33257149  T
Q  222 tgaagtgatgtcca 235  Q
    ||||||||| ||||    
T  33257148 tgaagtgatttcca 33257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 33277419 - 33277307
Alignment:
Q  125 gtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    |||||||||||||||| ||||| |||| |||| |||| |||||||||| | |||||||||  |||||  ||| | ||||||||||||| ||||  ||||     
T  33277419 gtgagaaaaacacaagaaggggagttg-aattgtgttagctttttcttcgctttctcctaagctgaaaacaccgatcagaagcaaatatagttatgcttt 33277321  T
Q  222 tgaagtgatgtcca 235  Q
    ||||||||| ||||    
T  33277320 tgaagtgatttcca 33277307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 39194974 - 39194924
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  39194974 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 39194924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 20908689 - 20908738
Alignment:
Q  183 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||||| |||||| |  ||||| ||||||||||||||||||||    
T  20908689 actgaagtcactgctcagaacctgatagacttcagcttctgaagtgatgt 20908738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 38281569 - 38281672
Alignment:
Q  130 aaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagt 227  Q
    |||||||||||| |||||||| | || |||| ||||||||||  ||||||||||  |||||  ||||| |||||| || ||| |||||  ||||||||||    
T  38281569 aaaaacacaagaagggggttgga-ttgtgttggctttttcttccttttctcctaagctgaaaacactgatcagaaacagatatagttctacttctgaagt 38281667  T
Q  228 gatgt 232  Q
    |||||    
T  38281668 gatgt 38281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 2266324 - 2266395
Alignment:
Q  163 ctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||| |||||||||||  |||||  ||||| |||||| || |||||||||  |||||||||||||||    
T  2266324 ctttttcttcgttttctcctaagctgaaaacactgatcagaatcagatagagttctacttctgaagtgatgt 2266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 23053577 - 23053609
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    |||||||||||||||||||||| ||||||||||    
T  23053577 tgaaggtgagaaaaacacaagaagggggttgaa 23053609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 29214985 - 29215107
Alignment:
Q  110 tagaagaatctgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaa 206  Q
    ||||| ||| ||||||||||||||||| |||| |||| |||||| || | || | ||||||||  |||||| |||  |||||  ||||| |||||||||     
T  29214985 tagaataatttgaaggtgagaaaaacataagaaggggtgttgaa-ttgtattagttttttcttctttttcttctaagctgaaaacactgatcagaagcag 29215083  T
Q  207 atagagttcagcttctgaagtgat 230  Q
    |||||||||  |||||||||||||    
T  29215084 atagagttccacttctgaagtgat 29215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 42283840 - 42283872
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    |||||||||||||||||||||| ||||||||||    
T  42283840 tgaaggtgagaaaaacacaagaagggggttgaa 42283872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 18771889 - 18771997
Alignment:
Q  122 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    ||||||||||||||||| || |||||||||| || |||| ||||||||||  | |||||||||||||||||||||||||||||| |||||||||| ||||    
T  18771889 aaggtgagaaaaacaca-gaagggggttgaa-ttgtgttagctttttcttcatcttctcctactgaagtcactgttcagaagcacatagagttcaacttc 18771986  T
Q  222 tgaagtgatgt 232  Q
    |||| ||||||    
T  18771987 tgaattgatgt 18771997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 43644073 - 43644185
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    ||||||||||||||||| ||| |||||||||| |||| |||| ||||||| ||  |||| |||||||||| |||||| ||||||||| ||||||||||||    
T  43644073 tgaaggtgagaaaaacataagaaggggggttg-aattgtgttagcttttttttcattttttcctactgaattcactgatcagaagcagatagagttcagc 43644171  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  43644172 ttctgaagtgatgt 43644185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 17007500 - 17007617
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| |||||||| |||||||||||  |||||  ||||| ||||||||||||| |||||     
T  17007500 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttgttttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatatagttct 17007598  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||| ||||    
T  17007599 gcttctgaagtgatttcca 17007617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 19706726 - 19706815
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||| |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  19706726 ggggggttgaa-ttgtgttagctttttcttcgttttctcctattgaagtcactgatcagaagcagatagagttcaacttctgaagtgatgt 19706815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 30422392 - 30422277
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagg-ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||| | ||||||||| || |||||||||||||||  ||||||||||  |||||  ||||| |||||||||||||||||||    
T  30422392 ctgaaggtgagaaaaacacaagaagaggggttgaa-ttgtgtttgctttttcttctttttctcctaagctgaaaacactgatcagaagcaaatagagttc 30422294  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  30422293 tacttctgaagtgatgt 30422277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 25163261 - 25163375
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||| ||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||| |||||||     
T  25163261 tgaaggtgagaaaaacataagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaacagagttct 25163359  T
Q  217 gcttctgaagtgatgt 232  Q
    ||||||||||||||||    
T  25163360 gcttctgaagtgatgt 25163375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 19957299 - 19957185
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctcctactgaag-tcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| |||| | |  |||| |||| |||||||||| ||||||||||||||||| |||||| ||||||||| ||| | |||||    
T  19957299 tgaaggtgagaaaaacacaagaaggggagattgaattgtgttagctttttcttcgttttctcctactgaagttcactgatcagaagcagataaatttcag 19957200  T
Q  218 cttctgaagtgatgt 232  Q
    ||| |||||||||||    
T  19957199 cttttgaagtgatgt 19957185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 45539445 - 45539331
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||     
T  45539445 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttct 45539347  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  45539346 acttctgaagtgatgt 45539331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 17541450 - 17541333
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||| || |||| | ||||||||  ||||||||||  |||||  ||||| ||||||||||||| |||||     
T  17541450 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagttttttcttcattttctcctaagctgaaaacactgatcagaagcaaatatagttct 17541352  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||||||||||| ||||    
T  17541351 gcttctgaagtgatttcca 17541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 15337015 - 15336934
Alignment:
Q  152 aattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| |||||||||||||||  |||||||||| ||||| |||||| |||| |||| ||||||||| ||||||||||||||||    
T  15337015 aattgtgtttgctttttcttctttttctcctaactgaaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15336934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 15426080 - 15425999
Alignment:
Q  152 aattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| |||||||||||||||  |||||||||| ||||| |||||| |||| |||| ||||||||| ||||||||||||||||    
T  15426080 aattgtgtttgctttttcttctttttctcctaactgaaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 15517384 - 15517303
Alignment:
Q  152 aattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| |||||||||||||||  |||||||||| ||||| |||||| |||| |||| ||||||||| ||||||||||||||||    
T  15517384 aattgtgtttgctttttcttctttttctcctaactgaaatcactgatcaggagcagatagagttctgcttctgaagtgatgt 15517303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 22672968 - 22673080
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||  |    
T  22672968 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctttttcttgtttttctcctaactgaaaatacagatcagaagcagatagagttctac 22673066  T
Q  219 ttctgaagtgatgt 232  Q
    |||||||| |||||    
T  22673067 ttctgaagagatgt 22673080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 12758680 - 12758586
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||||||  |||||| ||||||| ||||    
T  12758680 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaaactgaaaacactgatcagaagcaaatagagttttgcttctaaagtgatttcca 12758586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 14991049 - 14990935
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||     
T  14991049 tgaaggtgagaaaaacacaagatcggggggttg-aattgtgttggctttttcttctttttctcctaactgaaaatacaggtcagaagcatatagagttct 14990951  T
Q  217 gcttctgaagtgatgt 232  Q
     ||||||||| |||||    
T  14990950 acttctgaagagatgt 14990935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 19153237 - 19153331
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||||||||| || |||| |||| ||||| |||||||||||  |||||  ||||| ||||||||||||||||||  |||||||||||||| ||||    
T  19153237 ggggggttgaa-ttgtgttagcttattcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttatgcttctgaagtgatttcca 19153331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 36104533 - 36104651
Alignment:
Q  119 ctgaaggtgagaaaa-acacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| ||||||| |||||||||| |||| |||| ||||||||||  ||||||||| ||||||  ||| | ||||||||| || ||||||    
T  36104533 ctgaaggtgagaaaaaacacaagaaggggggttg-aattgtgttggctttttcttcattttctcctaactgaaaacacagatcagaagcagattgagttc 36104631  T
Q  216 agcttctgaagtgatgtcca 235  Q
      ||||||||| ||||||||    
T  36104632 tacttctgaagagatgtcca 36104651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 23185703 - 23185593
Alignment:
Q  122 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 219  Q
    |||||||||||||||||| |||||||||| |||| |||| | ||||||||  |||||| |||  |||||  ||||| ||||||||| |||||||||  ||    
T  23185703 aaggtgagaaaaacacaa-aggggggttg-aattgtgttggttttttcttctttttcttctaagctgaaaacactgatcagaagcagatagagttctact 23185606  T
Q  220 tctgaagtgatgt 232  Q
    ||||||| |||||    
T  23185605 tctgaagcgatgt 23185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 29692575 - 29692620
Alignment:
Q  191 cactgttcagaagcaaatagagttcagcttctgaagtgatgtccat 236  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||    
T  29692575 cactgatcagaagcaaatagagttctgcttctgaagtgatttccat 29692620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 16682172 - 16682097
Alignment:
Q  162 gctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    |||||||||| |||||||||||  |||||  || || ||||||||||||| ||||| |||||||||||||| ||||    
T  16682172 gctttttcttcgttttctcctaagctgaaaacaatgatcagaagcaaatatagttcggcttctgaagtgatttcca 16682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 18122094 - 18121980
Alignment:
Q  120 tgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||| ||||||| ||||||||||| || |||| ||||||||||  |||||||||   |||||  || || ||||||||| |||||||||    
T  18122094 tgaaggtgagaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctccttagctgaaaacattgatcagaagcagatagagttc 18121996  T
Q  216 agcttctgaagtgatg 231  Q
      ||||||||||||||    
T  18121995 tacttctgaagtgatg 18121980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 20256400 - 20256356
Alignment:
Q  191 cactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  20256400 cactgatcagaagcaaatagagttctgcttctgaagtgatttcca 20256356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 20256485 - 20256441
Alignment:
Q  191 cactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  20256485 cactgatcagaagcaaatagagttctgcttctgaagtgatttcca 20256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 31445292 - 31445406
Alignment:
Q  120 tgaaggtgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||| ||||||||||||  |||||||||| || |||| | ||||| ||| |||| |||||  |||||  ||||| ||||||||| |||||||||     
T  31445292 tgaaggtgacaaaaacacaagaatgggggttgaa-ttgtgttggtttttttttttttttttcctaagctgaaaacactgatcagaagcagatagagttct 31445390  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  31445391 acttctgaagtgatgt 31445406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 9768013 - 9767963
Alignment:
Q  119 ctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||| |||||||| |||| ||||| ||||||||    
T  9768013 ctgaaggtgagaaaaacacaagaagggggttg-aattgtgttttctttttct 9767963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 147
Target Start/End: Complemental strand, 17442818 - 17442787
Alignment:
Q  116 aatctgaaggtgagaaaaacacaagagggggg 147  Q
    ||||||||||||||||||||||||||||||||    
T  17442818 aatctgaaggtgagaaaaacacaagagggggg 17442787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 16206458 - 16206535
Alignment:
Q  157 tgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||  |||||||||||||||    
T  16206458 tgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 16206535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 43638954 - 43639004
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||||| |  |||| |||| |||||||||    
T  43638954 tgaaggtgagaaaaacacaagagggggggttgaattgtgttagctttttct 43639004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 17442735 - 17442694
Alignment:
Q  191 cactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||| |||||||||||||||||||  |||||||||||||||    
T  17442735 cactgatcagaagcaaatagagttctacttctgaagtgatgt 17442694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 17796630 - 17796721
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| ||||||||   |||||||||||||||    
T  17796630 ggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagatagagttatacttctgaagtgatgt 17796721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 43773308 - 43773360
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttcttt 172  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||||    
T  43773308 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttt 43773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 1210661 - 1210610
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 171  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  1210661 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttctt 1210610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 13431579 - 13431528
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 171  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  13431579 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttctt 13431528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 17287124 - 17287073
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 171  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  17287124 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttctt 17287073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 18676847 - 18676898
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 171  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  18676847 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttctt 18676898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 10884133 - 10884021
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||||||||  |||||  ||||| ||||||||||||||||||      
T  10884133 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttagctttttctttgttttctcctaagctgaaaacactgatcagaagcaaatagagttat 10884035  T
Q  217 gcttctgaagtgat 230  Q
    ||||||||||||||    
T  10884034 gcttctgaagtgat 10884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 13261636 - 13261524
Alignment:
Q  122 aaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||| ||||||||||| || ||||| ||||||||| |||||||||||  |||||  || || ||||||||||||||||||| ||    
T  13261636 aaggtgagaaaaacacaagaaggggggttgaa-ttgtgttttctttttcttcgttttctcctaagctgaacacattgatcagaagcaaatagagttctgc 13261538  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  13261537 ttctgaagtgatgt 13261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 19238023 - 19237910
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||| |||| ||||||||||| || ||||| |||||||||  ||||||| |||||||||||||  | | ||||||||||||||||     
T  19238023 ctgaaggtgagaaaaacaaaagaaggggggttgaa-ttgtgttttctttttcttcattttctcttactgaagtcactagttataagcaaatagagttcaa 19237925  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  19237924 cttctgaagtgatgt 19237910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 13902616 - 13902504
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||| ||||||||||||||| ||| ||||||| || |||| |||||||||| ||||||||||||  |||||| || |||||||||||||||||||| |    
T  13902616 tgaaggggagaaaaacacaagaagggaggttgaa-ttgtgttagctttttcttcgttttctcctacataagtcaatgatcagaagcaaatagagttcaac 13902518  T
Q  219 ttctgaagtgatgt 232  Q
    |||||| |||||||    
T  13902517 ttctgatgtgatgt 13902504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 4493739 - 4493853
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||     
T  4493739 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttct 4493837  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  4493838 acttctgaagtgatgt 4493853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 33604099 - 33604213
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||||| |||     
T  33604099 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagaattct 33604197  T
Q  217 gcttctgaagtgatgt 232  Q
    |||||||| |||||||    
T  33604198 gcttctgacgtgatgt 33604213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 21211542 - 21211427
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg----gttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| ||||    |||||| || |||| ||||||| || ||||||||||||||||||| ||| ||||||| | |||||||||    
T  21211542 tgaaggtgagaaaaacacaagaaggggaggggttgaa-ttgtgttagctttttattcgttttctcctactgaagtcgctgatcagaagtagatagagttc 21211444  T
Q  216 agcttctgaagtgatgt 232  Q
    |||||||||| ||||||    
T  21211443 agcttctgaaatgatgt 21211427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 39285503 - 39285390
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| |||||| |  |||| ||||   ||||||||  ||||||||||||||||||| |  ||||||| | ||||||||||||    
T  39285503 tgaaggtgagaaaaacacaagaaggggggattgaattgtgttacttttttcttcattttctcctactgaagtcagtaatcagaagtagatagagttcagc 39285404  T
Q  219 ttctgaagtgatgt 232  Q
    ||||||||||||||    
T  39285403 ttctgaagtgatgt 39285390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 5001826 - 5001711
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| | || | | ||||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||||||| |||||     
T  5001826 tgaaggtgagaaaaacacaagaagtggaggttaaattatgttagctttttcttcgttttctcctaagctgaaagcactgatcagaagcaaataaagttct 5001727  T
Q  217 gcttctgaagtgatgt 232  Q
    ||||||||||||||||    
T  5001726 gcttctgaagtgatgt 5001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 16315497 - 16315383
Alignment:
Q  124 ggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 219  Q
    |||||||||||||||||| ||  |||||||| || |||| | |||||||| |||||||||||  |||||  ||||| ||||||||||||||||||| |||    
T  16315497 ggtgagaaaaacacaagaaggaggggttgaa-ttgtgttaggtttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctgct 16315399  T
Q  220 tctgaagtgatgtcca 235  Q
    ||||||||||| ||||    
T  16315398 tctgaagtgatttcca 16315383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 12367720 - 12367606
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||| |||||||||||||||| ||||||||||| || ||||  ||||||||| |||||||||||   ||||  ||||| |||||||||||||||||||     
T  12367720 tgaagttgagaaaaacacaagacggggggttgaa-ttgtgttatctttttcttcgttttctcctaaggtgaaaacactgatcagaagcaaatagagttct 12367622  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  12367621 tcttctgaagtgatgt 12367606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 13259406 - 13259292
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||| || ||||| ||||||||| |||||||||||  ||||   ||||| ||||||  |||||||||||     
T  13259406 tgaaggtgagaaaaacacaagaaggggggttgaa-ttgtgttttctttttcttcgttttctcctaagctgacaacactgatcagaaataaatagagttct 13259308  T
Q  217 gcttctgaagtgatgt 232  Q
    |||||| |||||||||    
T  13259307 gcttctaaagtgatgt 13259292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 14186880 - 14186995
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| ||||| |||    
T  14186880 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgtttactttttcttctttttctcctaggctgaaaacactgatcagaagcagatagaattc 14186978  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  14186979 tacttctgaagtgatgt 14186995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 13424831 - 13424766
Alignment:
Q  168 tctttgttttctcc-tactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| ||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  13424831 tcttcgttttctccatactgaggtcactgatcagaagcatatagagttcagcttctgaagtgatgt 13424766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 11792065 - 11792179
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| ||||  ||||||||| |||||||||||   ||||  ||||| ||||||||| |||| ||||     
T  11792065 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttatctttttcttcgttttctcctaagttgaaaacactgatcagaagcagatagtgttct 11792163  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  11792164 acttctgaagtgatgt 11792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 13731616 - 13731522
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||| | ||||||||||||||||||| |||||||||||||| ||||    
T  13731616 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacacagatcagaagcaaatagagttctgcttctgaagtgatttcca 13731522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 21284337 - 21284223
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||  ||||| |||||  |||||  ||||| ||||||||| |||||||||     
T  21284337 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgtttactttttctccgttttttcctaagctgaaaacactgatcagaagcagatagagttct 21284239  T
Q  217 gcttctgaagtgatgt 232  Q
      ||||||||||||||    
T  21284238 atttctgaagtgatgt 21284223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 29936301 - 29936194
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctac--tgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| |||||||||      ||||||||||||||| |||||||| ||   ||||  || || ||||||||||||||||||| |    
T  29936301 tgaaggtgagaaaaacacaag-ggggggttg------tgtttgctttttcttcgttttctcgtaagatgaaaacattgatcagaagcaaatagagttctg 29936209  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  29936208 cttctgaagtgatgt 29936194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 9099166 - 9099107
Alignment:
Q  173 gttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||    
T  9099166 gttttttcctactgaagtcactgatcagaagcagatagaattcagcttttgaagtgatgt 9099107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 9099980 - 9099921
Alignment:
Q  173 gttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||    
T  9099980 gttttttcctactgaagtcactgatcagaagcagatagaattcagcttttgaagtgatgt 9099921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 16557575 - 16557466
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  || |||||||  |||||  ||||| ||||||||| ||||||||    
T  16557575 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttatctcctaagctgaaaacactgatcagaagcagatagagtt 16557477  T
Q  215 cagcttctgaa 225  Q
    |  ||||||||    
T  16557476 ctacttctgaa 16557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 16608087 - 16608196
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  || |||||||  |||||  ||||| ||||||||| ||||||||    
T  16608087 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttctttatctcctaagctgaaaacactgatcagaagcagatagagtt 16608185  T
Q  215 cagcttctgaa 225  Q
    |  ||||||||    
T  16608186 ctacttctgaa 16608196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 21691615 - 21691733
Alignment:
Q  118 tctgaaggtgagaaaaacacaaga---ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagag 212  Q
    ||||||||||||||||||||||||   ||||||||| |||| |||| |||||||||   ||||||||||  |||||  ||||| ||||||||| ||| ||    
T  21691615 tctgaaggtgagaaaaacacaagaaagggggggttg-aattgtgttggctttttctacattttctcctaagctgaaaacactgatcagaagcagataaag 21691713  T
Q  213 ttcagcttctgaagtgatgt 232  Q
    |||  |||||||||||||||    
T  21691714 ttctacttctgaagtgatgt 21691733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 30025128 - 30025192
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||| |||||||||||    
T  30025128 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgtttgctttttcttcgttttctccta 30025192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 11318589 - 11318707
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg--gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| ||  |||||||| || || | ||||||| || ||||||| |||  |||||  ||||| ||||||| |||||||||||    
T  11318589 tgaaggtgagaaaaacacaagaaggaggggttgaa-ttgtgctagcttttttttagttttcttctaagctgaaaacactgatcagaagaaaatagagttc 11318687  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||||||||||||| ||||    
T  11318688 ggcttctgaagtgatttcca 11318707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 15705458 - 15705343
Alignment:
Q  120 tgaaggtgagaaaaa--cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||  ||||||| ||||||||||| || |||| ||||||||||  |||||||||| |||||  ||| | |||||||||||||||||||    
T  15705458 tgaaggtgagaaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctcctaactgaaaacacagatcagaagcaaatagagttc 15705360  T
Q  216 agcttctgaagtgatgt 232  Q
      ||||||||| |||||    
T  15705359 tacttctgaagagatgt 15705343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 13027914 - 13027800
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggg-ggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||| ||||||| || |||||||||||||||  ||||||||||  | |||  || || ||||||||| |||||||||     
T  13027914 tgaaggtgagaaaaacacaagaagggaggttgaa-ttgtgtttgctttttcttcattttctcctaagccgaaaacattgatcagaagcagatagagttct 13027816  T
Q  217 gcttctgaagtgatgt 232  Q
     ||||| |||||||||    
T  13027815 acttctaaagtgatgt 13027800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 13645669 - 13645763
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||| | ||||||||||||||||||| ||||||||| |||| ||||    
T  13645669 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacaccgatcagaagcaaatagagttctgcttctgaactgatttcca 13645763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 2499223 - 2499337
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| ||||| |  |||| ||||  |||||||||  ||||||||||  |||||  ||||  ||||||||| |||||||||      
T  2499223 tgaaggtgagaaaaacacaagaagggggattgaattgtgttaactttttcttcattttctcctaagctgaaaacactaatcagaagcagatagagttcta 2499322  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||| ||||||    
T  2499323 cttctgaaatgatgt 2499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 8182149 - 8182215
Alignment:
Q  116 aatctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    |||||||||||||||||||||||||| |||||||| |||| ||||  |||||||||  ||||||||||    
T  8182149 aatctgaaggtgagaaaaacacaagaagggggttg-aattgtgttgcctttttcttgtttttctccta 8182215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 13138889 - 13138774
Alignment:
Q  120 tgaaggtgagaaaaacacaagagg--ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||||||||||||||||||| |  ||||||||| || |||| ||||||||||  ||||||| ||  |||||  || || ||||||||| |||||||||    
T  13138889 tgaaggtgagaaaaacacaagaagagggggttgaa-ttgtgttggctttttcttctttttctcttatgctgaaaacattgatcagaagcagatagagttc 13138791  T
Q  216 agcttctgaagtgatgt 232  Q
      |||||||||||||||    
T  13138790 tacttctgaagtgatgt 13138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 1292240 - 1292311
Alignment:
Q  113 aagaatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    |||||||||||||||||||||||||||||  ||| ||||| |||| |||| ||||||||||  ||||||||||    
T  1292240 aagaatctgaaggtgagaaaaacacaagaaggggaggttg-aattgtgttagctttttcttctttttctccta 1292311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 13302100 - 13302168
Alignment:
Q  164 tttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgat 230  Q
    |||||||| |||||||||||  |||||  ||||  ||||||||||||||||||| ||||||||||||||    
T  13302100 tttttcttcgttttctcctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 13302168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 13879361 - 13879452
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||||||||||||||  ||||||| ||  |||||  ||||| ||||||||| |||||||||  |||||||||||||||    
T  13879361 ggggggttgaa-ttgtgtttgctttttcttctttttctcttatgctgaaaacactgatcagaagcagatagagttctacttctgaagtgatgt 13879452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 16317517 - 16317445
Alignment:
Q  162 gctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||||||||| |||||||| ||  |||||  ||||| ||||||||||||| ||||| ||||||||||||||||    
T  16317517 gctttttcttcgttttctcataagctgaaaacactgatcagaagcaaataaagttctgcttctgaagtgatgt 16317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 22580220 - 22580103
Alignment:
Q  118 tctgaaggtgagaaaaacacaa--gaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||||||||||||||||  | ||||||||| |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||| ||||| ||| |||    
T  22580220 tctgaaggtgagaaaaacacaaggggggggggttg-aattgtgttggctttttcttctttttctcctatgctgaaaacactgatcaaaagcagataaagt 22580122  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||| ||||||    
T  22580121 tctacttctgaactgatgt 22580103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 235
Target Start/End: Complemental strand, 2914623 - 2914502
Alignment:
Q  116 aatctgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagag 212  Q
    |||||||| || ||||||| |||||| |||| | |  |||| |||| |||||||||| |||| ||||||  |||||  ||||| ||||||||||||||||    
T  2914623 aatctgaatgtaagaaaaaaacaagaaggggagattgaattgtgttagctttttcttcgttt-ctcctaagctgaaaacactgatcagaagcaaatagag 2914525  T
Q  213 ttcagcttctgaagtgatgtcca 235  Q
    ||| |||||||||| ||| ||||    
T  2914524 ttctgcttctgaagagatttcca 2914502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 28623284 - 28623202
Alignment:
Q  152 aattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||||  |||||||||||||||    
T  28623284 aattgtgttggctttttcttctttttctcctaagctgaacacactgatcagaagcagatagagttctacttctgaagtgatgt 28623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 3921650 - 3921696
Alignment:
Q  183 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 229  Q
    |||||||||||  |||| ||||| |||||||||||||||||||||||    
T  3921650 actgaagtcacaattcataagcagatagagttcagcttctgaagtga 3921696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 8932954 - 8933003
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||||||    
T  8932954 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttttctttttct 8933003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 9069000 - 9069073
Alignment:
Q  165 ttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtccat 236  Q
    ||||||| |||||||||||  |||||  ||||| ||||||||||||| ||||  |||||||||||||| |||||    
T  9069000 ttttcttcgttttctcctaagctgaaaacactgatcagaagcaaataaagttttgcttctgaagtgatttccat 9069073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 13681534 - 13681607
Alignment:
Q  164 tttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    |||||||| |||||||||||  |||||  || || | ||||||||||||||||| |||||||||||||| ||||    
T  13681534 tttttcttcgttttctcctaagctgaaaacattgattagaagcaaatagagttctgcttctgaagtgatttcca 13681607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 1560007 - 1559955
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctt 171  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  1560007 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttctt 1559955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 14424525 - 14424616
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || ||||| ||||||||| |||||||||||  || ||  ||||| ||||||||| || ||||||  |||||||||||||||    
T  14424525 ggggggttgaa-ttgtgtttactttttcttcgttttctcctaatctaaaaacactgatcagaagcagatcgagttctacttctgaagtgatgt 14424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 16546277 - 16546186
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| ||| |||||  |||||||||||||||    
T  16546277 ggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16546186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 16619385 - 16619476
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||||||||| || |||| ||||||||||  ||||||||||  |||||  ||||| ||||||||| ||| |||||  |||||||||||||||    
T  16619385 ggggggttgaa-ttgtgttggctttttcttctttttctcctaagctgaaaacactgatcagaagcagataaagttctacttctgaagtgatgt 16619476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 3779584 - 3779533
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttcttt 172  Q
    ||||||||||||||||| |||| |||||||| |||| |||| |||||||||||    
T  3779584 tgaaggtgagaaaaacataagaagggggttg-aattgtgttagctttttcttt 3779533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 6045194 - 6045143
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  6045194 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 6045143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 13034819 - 13034702
Alignment:
Q  119 ctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtt-tgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    |||||||||| ||||||||||||  ||||||||||| || |||| |  ||||||||  ||||||||||  |||||  ||||| ||||||||| ||| |||    
T  13034819 ctgaaggtgataaaaacacaagaagggggggttgaa-ttgtgttattttttttcttcattttctcctaagctgaaaacactgatcagaagcagatacagt 13034721  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||||||||||    
T  13034720 tctacttctgaagtgatgt 13034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 18418583 - 18418611
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagggggg 147  Q
    |||||||||||||||||||||||||||||    
T  18418583 ctgaaggtgagaaaaacacaagagggggg 18418611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 26042651 - 26042719
Alignment:
Q  164 tttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    ||||| ||||||||||||| ||||||||| || ||||| |||  |||| | || |||||||||||||||    
T  26042651 tttttttttgttttctcctgctgaagtcattgatcagaggcagttagattacaacttctgaagtgatgt 26042719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 48063772 - 48063740
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaa 152  Q
    |||||||||||||||||||||| ||||||||||    
T  48063772 tgaaggtgagaaaaacacaagaagggggttgaa 48063740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 73736 - 73835
Alignment:
Q  128 agaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagt 227  Q
    |||||||||||||| ||||| |  |||||||||| ||||||||| |||||||||||||||| |||||| ||| ||||| |||||||||| ||||||||||    
T  73736 agaaaaacacaagaagggggattgaattttgtttactttttcttcgttttctcctactgaaatcactgatcaaaagcagatagagttcaacttctgaagt 73835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 517 - 602
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagc 204  Q
    |||||||||||||||||||||| |||||| |  |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  517 tgaaggtgagaaaaacacaagaaggggggattgaattgtgtttgctttttcttcgttttctcctactgaagtcactgatcagaagc 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 894 - 809
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagc 204  Q
    |||||||||||||||||||||| |||||| |  |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  894 tgaaggtgagaaaaacacaagaaggggggattgaattgtgtttgctttttcttcgttttctcctactgaagtcactgatcagaagc 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 80560 - 80664
Alignment:
Q  120 tgaaggtgagaaaaa-cacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||| |||||||||| ||||||||||||||||||||||| ||||| ||| ||||| ||||||    
T  80560 tgaaggtgagaaaaaacacaagaagggggtt-aaattgtgttagctttttcttcgttttctcctactgaagtcactgatcagatgcagatagaattcagc 80658  T
Q  219 ttctga 224  Q
     |||||    
T  80659 atctga 80664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 24689 - 24576
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||| ||| | |||||||| |||| |||||||| ||||||  ||||||||| ||||||  ||||  ||||||||| |||||| ||      
T  24689 tgaaggtgagaaaaacataagaatgggggttg-aattatgtttgctctttcttctttttctcctaactgaaaacactaatcagaagcagatagagctcta 24591  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  24590 cttctgaagtgatgt 24576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 5372 - 5483
Alignment:
Q  122 aaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcag-aagcaaatagagttcagct 219  Q
    ||||||||||||||||||| |||||||||| |||| |||| |||||||||| ||| |||| ||||||| |||||| |||| ||| | |||||||||||||    
T  5372 aaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttatctcatactgaaatcactgatcagaaagaagatagagttcagct 5470  T
Q  220 tctgaagtgatgt 232  Q
    |||||||||||||    
T  5471 tctgaagtgatgt 5483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 1014 - 1123
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||| |||||||||| |||||||||| |||| |||||| |||||||| ||||||||||||||||||||||  |||||| ||  |||||| || |    
T  1014 tgaaggtgagcaaaacacaagaaggggggttg-aattgtgtttgatttttcttcgttttctcctactgaagtcactagtcagaatcagttagagtacaac 1112  T
Q  219 ttctgaagtga 229  Q
    |||||||||||    
T  1113 ttctgaagtga 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 245167 - 245064
Alignment:
Q  119 ctgaaggtgagaaaaacacaagaggggg-gttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||| |||||| |||| |||||| || |||| ||||||| ||| |||| ||||||||||||||||| ||||||| | |||||||||||    
T  245167 ctgaaggtgagaaaaatacaagaaggggagttgaa-ttctgttagctttttatttattttttcctactgaagtcactgatcagaagtagatagagttcag 245069  T
Q  218 cttct 222  Q
    |||||    
T  245068 cttct 245064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 378466 - 378348
Alignment:
Q  120 tgaaggtgagaaaaacacaagagg--ggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||| ||||||||||||||||| |  ||||||||| || |||| |||||||||| |||||||||||  |||||  ||||  |||||||||||||||||||    
T  378466 tgaaagtgagaaaaacacaagaagaaggggttgaa-ttgtgttagctttttcttcgttttctcctaatctgaaaacactaatcagaagcaaatagagttc 378368  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||||||||||||| ||||    
T  378367 tgcttctgaagtgatttcca 378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 210603 - 210715
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttcagc 218  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||  ||||||||| ||||||   || | ||||||||| |||||||||  |    
T  210603 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttggctttttcttgtttttctcctaactgaaaatacagatcagaagcagatagagttctac 210701  T
Q  219 ttctgaagtgatgt 232  Q
    |||||||| |||||    
T  210702 ttctgaagagatgt 210715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 2163 - 2280
Alignment:
Q  117 atctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagt 213  Q
    |||||||||||||||||||||||| || ||||||| |||| ||||| |||||||||  ||||||||||  |||||  ||||| ||||||||| |||||||    
T  2163 atctgaaggtgagaaaaacacaagaagtggggttg-aattgtgttttctttttcttctttttctcctaagctgaatacactgatcagaagcagatagagt 2261  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  |||||||||||||||    
T  2262 tctacttctgaagtgatgt 2280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 28976 - 29079
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagct 219  Q
    |||||||||||||||||||||| ||||||| ||||| || || ||||||||||     |||||| ||||||||||||||  || ||||||||||||||||    
T  28976 tgaaggtgagaaaaacacaagaagggggtt-aaattgtggtttctttttctttc----ctcctattgaagtcactgttctaaatcaaatagagttcagct 29070  T
Q  220 tctgaagtg 228  Q
    |||||||||    
T  29071 tctgaagtg 29079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 20376 - 20267
Alignment:
Q  122 aaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagct 219  Q
    ||||||||||||||| |||| |||||||| |||| |||| | |||||||| |||||||||||  || ||   |||| ||||||| ||||||||||| |||    
T  20376 aaggtgagaaaaacaaaagaagggggttg-aattgtgttagttttttcttcgttttctcctaagctaaaaaaactgatcagaagtaaatagagttctgct 20278  T
Q  220 tctgaagtgat 230  Q
    |||||||||||    
T  20277 tctgaagtgat 20267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 110509 - 110392
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-----ggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||||||||||||||||     ||||||||| |||| |||| | |||||||| |||||||||| ||||||   || | ||||||||| |||||||    
T  110509 tgaaggtgagaaaaacacaagaaggagggggggttg-aattgtgttggttttttcttcgttttctcctaactgaaaatacagatcagaagcagatagagt 110411  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||  ||||||||| |||||    
T  110410 tctacttctgaagagatgt 110392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 9098 - 9209
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||  |||||||||| || |||  |||||||||| |||||||||||  |||||  ||||| ||||||||||||||| | | |    
T  9098 tgaaggtgagaaaaacacaag--gggggttgaa-ttgtgtaagctttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagaatactg 9194  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  9195 cttctgaagtgatgt 9209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 817 - 932
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||  |||| ||||  ||||||||| |||||||||||  |||||  ||||| ||||||||| ||||| |||     
T  817 tgaaggtgagaaaaacacaagaaggggggtttgaattgtgttaactttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagaattct 916  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  917 acttctgaagtgatgt 932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 25630 - 25739
Alignment:
Q  126 tgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttc 221  Q
    |||||||| |||||||  ||||||||||| || ||||| ||||||||| |||||||||||  |||||  ||||| |||||||||||||||||||  ||||    
T  25630 tgagaaaagcacaagaagggggggttgaa-ttgtgtttactttttcttcgttttctcctaagctgaaaacactgatcagaagcaaatagagttctacttc 25728  T
Q  222 tgaagtgatgt 232  Q
    |||||||||||    
T  25729 tgaagtgatgt 25739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 7623 - 7509
Alignment:
Q  120 tgaaggtgagaaaaa-cacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta-ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||| ||||||| ||||||||||| || |||| ||||||||||  |||||||||| |||||  ||||| ||||||||| |||||||||     
T  7623 tgaaggtgagaaaaaacacaagaaggggggttgaa-ttgtgttggctttttcttctttttctcctaactgaaaacactgatcagaagcagatagagttct 7525  T
Q  217 gcttctgaagtgatgt 232  Q
     |||||||||||||||    
T  7524 acttctgaagtgatgt 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 2987 - 2870
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg------ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagt 213  Q
    ||||||||||||||||||||||||||||      ||||| || |||| |||||||||| ||||||||||||||||||||||| | | ||||| ||| | |    
T  2987 tgaaggtgagaaaaacacaagaggggggggggggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactgataataagcagatataat 2889  T
Q  214 tcagcttctgaagtgatgt 232  Q
    ||| ||||||| |||||||    
T  2888 tcaacttctgaggtgatgt 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 2650 - 2767
Alignment:
Q  119 ctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctcct-actgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| |||||||||| |||| |||| ||||||||||  ||||||||| ||||||  ||| | ||||||||| || ||||||     
T  2650 ctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttggctttttcttcattttctcctaactgaaaacacagatcagaagcagattgagttct 2748  T
Q  217 gcttctgaagtgatgtcca 235  Q
     ||||||||| ||||||||    
T  2749 acttctgaagagatgtcca 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 4887 - 4998
Alignment:
Q  120 tgaaggtgagaaaaacacaagagggggg--ttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcag 217  Q
    |||||||||||||||||||||| |||||  ||||| || ||||  |||||| |  ||||||||||||||||||||||| ||||||| | ||| | |||||    
T  4887 tgaaggtgagaaaaacacaagaagggggagttgaa-ttgtgttaactttttgtc-gttttctcctactgaagtcactgatcagaaggagatataattcag 4984  T
Q  218 cttctgaagtgatg 231  Q
    ||||||||||||||    
T  4985 cttctgaagtgatg 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 36626 - 36738
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||  ||| ||||||||| |||||     
T  36626 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactaatcataagcaaataaagttct 36724  T
Q  217 gcttctgaagtgat 230  Q
    | ||||||||||||    
T  36725 gtttctgaagtgat 36738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 134686 - 134798
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||  ||| ||||||||| |||||     
T  134686 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactaatcataagcaaataaagttct 134784  T
Q  217 gcttctgaagtgat 230  Q
    | ||||||||||||    
T  134785 gtttctgaagtgat 134798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 7866 - 7976
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||| ||| || ||||||| |||| |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||||||     
T  7866 tgaaggtgagaaaaacataagaagaggggttg-aattgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagatagagttcc 7964  T
Q  217 gcttctgaagtg 228  Q
     |||||||||||    
T  7965 acttctgaagtg 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 2905 - 2816
Alignment:
Q  142 ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttctgaagtgat 230  Q
    ||||||||||| || |||| |||||||||| |||||||||||  |||||  ||||  ||||||||||||||||||| ||||||||||||||    
T  2905 ggggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacacttatcagaagcaaatagagttctgcttctgaagtgat 2816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 31786 - 31903
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    ||||||||||||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||  ||  |  ||||| ||||||||||||| |||||     
T  31786 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttagctttttcttcgttttctcctaagcttgaaacactgatcagaagcaaataaagttct 31884  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||| || |||| ||||    
T  31885 gcttctaaattgatttcca 31903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 48512 - 48630
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    |||||| |||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||||  ||| |  ||||| |||||||| |||||||||     
T  48512 tgaaggagagaaaaacacaagaagggggggttg-aattgtgttagctttttcttcattttctcctaagctggaaacactgatcagaagcgaatagagttt 48610  T
Q  216 agcttctgaagtgatgtcca 235  Q
     |||| ||||||||| ||||    
T  48611 tgcttttgaagtgatttcca 48630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 7076 - 7193
Alignment:
Q  120 tgaaggtgagaaaaacacaaga-ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttca 216  Q
    |||||||||||||||||||||| ||||||||||| | | |||  |||||||||  ||||||||||  |||||  ||||| ||||||||||||||||||      
T  7076 tgaaggtgagaaaaacacaagaaggggggttgaactct-gttaactttttcttatttttctcctaagctgaaaacactgatcagaagcaaatagagttat 7174  T
Q  217 gcttctgaagtgatgtcca 235  Q
    |||||| ||||||| ||||    
T  7175 gcttcttaagtgatttcca 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 19569 - 19454
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttc 215  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| |||||||||| |||||||| ||  |||||  ||||  ||||||||| |||||||||    
T  19569 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgttggctttttcttcgttttctcttatgctgaaaacactaatcagaagcagatagagttc 19471  T
Q  216 agcttctgaagtgatgt 232  Q
      ||||||| |||||||    
T  19470 tacttctgacgtgatgt 19454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 44745 - 44665
Alignment:
Q  152 aattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagcaaatagagttcagcttctgaagtgatgt 232  Q
    |||| |||| |||||||||| |||||||||||||||| |||||| ||| ||||| |||||||||  || || |||||||||    
T  44745 aattgtgttagctttttcttcgttttctcctactgaaatcactgatcaaaagcagatagagttccactgctaaagtgatgt 44665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 102752 - 102866
Alignment:
Q  121 gaaggtgagaaaaacacaagaggggggt-tgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcag 217  Q
    ||||||||||||||||||||| |||||| |  |||| | ||  ||||||||| |||||||||||  |||||  ||||| ||| ||||| |||||||||      
T  102752 gaaggtgagaaaaacacaagaagggggtgttgaattgtattaactttttcttcgttttctcctaagctgaaaacactgatcataagcagatagagttcta 102851  T
Q  218 cttctgaagtgatgt 232  Q
    |||||||||||||||    
T  102852 cttctgaagtgatgt 102866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 1126 - 1037
Alignment:
Q  120 tgaaggtgagaaaaacacaaga---gggg---ggttgaaattttgtttgctttttctttgttttctcctactgaagtcactgttcagaagc 204  Q
    ||||||||||||||||||||||   ||||   ||||||| || |||| |||||||||| |||||||||||||||||||||| || ||||||    
T  1126 tgaaggtgagaaaaacacaagaagcggggagaggttgaa-ttgtgttagctttttcttcgttttctcctactgaagtcactatttagaagc 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 232
Target Start/End: Original strand, 9158 - 9277
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggg------gggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaataga 211  Q
    |||||||||||||||||||||| ||      |||||||| || |||| |||||||||| |||||||||||  |||||  ||||| ||||||||| |||||    
T  9158 tgaaggtgagaaaaacacaagaaggcctagggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacactgatcagaagcagataga 9256  T
Q  212 gttcagcttctgaagtgatgt 232  Q
     |||  |||||||||||||||    
T  9257 attctacttctgaagtgatgt 9277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 232
Target Start/End: Complemental strand, 868 - 752
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagtt 214  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||  |||||||||   |||||||||  |||||  ||||| ||||||||| || || ||    
T  868 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttaactttttcttctatttctcctaagctgaaaacactgatcagaagcagatggaatt 770  T
Q  215 cagcttctgaagtgatgt 232  Q
    |  |||||||||||||||    
T  769 ctacttctgaagtgatgt 752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 14317 - 14425
Alignment:
Q  126 tgagaaaaacacaagag-gggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagcaaatagagttcagcttct 222  Q
    ||||||||||| ||||  |||||||||| || |||| |||||||||| |||||||||||  |||||  || || ||| ||||||||||||||| |||| |    
T  14317 tgagaaaaacataagaatgggggttgaa-ttgtgttagctttttcttcgttttctcctaagctgaaaacaatgatcaaaagcaaatagagttctgctttt 14415  T
Q  223 gaagtgatgt 232  Q
    ||||||||||    
T  14416 gaagtgatgt 14425  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 21849 - 21790
Alignment:
Q  120 tgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttct 179  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||| |||||||    
T  21849 tgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttcttcgttttct 21790  T

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Target: scaffold0337 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 14238 - 14281
Alignment:
Q  192 actgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||    
T  14238 actgatcagaagcaaatagagttcggcttctgaagtgatttcca 14281  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 1280 - 1323
Alignment:
Q  192 actgttcagaagcaaatagagttcagcttctgaagtgatgtcca 235  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||    
T  1280 actgatcagaagcaaatagagttcggcttctgaagtgatttcca 1323  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 211549 - 211643
Alignment:
Q  114 agaatctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttctttgttttctccta--ctgaagtcactgttcagaagca 205  Q
    ||||| ||||||||||||||||||||| ||||||| |  |||| |||| ||||||| || |||||||||||  |||||  ||||| |||||||||    
T  211549 agaatttgaaggtgagaaaaacacaagaaggggggattgaattgtgttagctttttattcgttttctcctaagctgaaaacactgatcagaagca 211643  T

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Target: scaffold1539 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 1558 - 1608
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  1558 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 1608  T

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Target: scaffold0738 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 5673 - 5623
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||||||||| |  |||| ||||| ||||||||    
T  5673 tgaaggtgagaaaaacacaagagggggggttgaattgtgttttctttttct 5623  T

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Target: scaffold0525 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 7054 - 7103
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttct 170  Q
    |||||||||||||||||||||| |||||||| |||| ||||| ||||||||    
T  7054 tgaaggtgagaaaaacacaagaagggggttg-aattgtgttttctttttct 7103  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 26564 - 26500
Alignment:
Q  120 tgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||  ||||||||||    
T  26564 tgaaggtgagaaaaacacaagaagggggggttg-aattgtgttagctttttcttctttttctccta 26500  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 267977 - 268023
Alignment:
Q  183 actgaagtcactgttcagaagcaaatagagttcagcttctgaagtga 229  Q
    |||||||||||||||||||| |  ||| |||||||||||||||||||    
T  267977 actgaagtcactgttcagaacctgataaagttcagcttctgaagtga 268023  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 83489 - 83556
Alignment:
Q  115 gaatctgaaggtgagaaaaacacaagaggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    |||| ||||||||||||||||||||||  | ||||| |||| |||| ||||||||||  ||||||||||    
T  83489 gaatgtgaaggtgagaaaaacacaagaatgaggttg-aattgtgttagctttttcttctttttctccta 83556  T

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Target: scaffold0267 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 7230 - 7178
Alignment:
Q  118 tctgaaggtgagaaaaacacaag-aggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||    
T  7230 tctgaaggtgagaaaaacacaagaaggggggttg-aattgtgttttctttttct 7178  T

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Target: scaffold0193 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 16989 - 16956
Alignment:
Q  120 tgaaggtgagaaaaacacaagaggggggttgaaa 153  Q
    ||||||||||||||||| ||||||||||||||||    
T  16989 tgaaggtgagaaaaacaaaagaggggggttgaaa 16956  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 37611 - 37556
Alignment:
Q  116 aatctgaaggtgagaaaaacacaaga--ggggggttgaaattttgtttgctttttct 170  Q
    ||||||||||||||||||||||||||  ||||||||| |||| ||||| ||||||||    
T  37611 aatctgaaggtgagaaaaacacaagaagggggggttg-aattgtgttttctttttct 37556  T

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Target: scaffold1149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 2590 - 2618
Alignment:
Q  119 ctgaaggtgagaaaaacacaagagggggg 147  Q
    |||||||||||||||||||||||||||||    
T  2590 ctgaaggtgagaaaaacacaagagggggg 2618  T

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Target: scaffold0217 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 18231 - 18295
Alignment:
Q  120 tgaaggtgagaaaa-acacaagaggggggttgaaattttgtttgctttttctttgttttctccta 183  Q
    |||||||||||||| |||||||||||||| |  |||| ||||| |||||||||  ||||||||||    
T  18231 tgaaggtgagaaaagacacaagagggggggttgaattgtgttttctttttcttctttttctccta 18295  T

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