View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6834_low_3 (Length: 366)
Name: NF6834_low_3
Description: NF6834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6834_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 10 - 341
Target Start/End: Original strand, 33693059 - 33693390
Alignment:
| Q |
10 |
atgaatacttattaaacacaagacaataattttgagttaaatagttgaatttatttattacaaccttcttagtaaagaattactcccaaaaattagtggt |
109 |
Q |
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| T |
33693059 |
atgaatacttattaaacacaagacaataattttgagttaaatagttggatttatttattacaaccttcttagaaaagaattactcccaaaaattactggt |
33693158 |
T |
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| Q |
110 |
tacatgtgggttaggactggccaaaactactttaaccaattatgaggcataggatactggacaccttaggccagaaacctcttatccatcttcttctaca |
209 |
Q |
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| T |
33693159 |
tacatgtgggttaggactggccaaaactactttaaccaattatgaggcataggatactggaaaccttaggccagaaacctcttatccatcttcttctaca |
33693258 |
T |
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| Q |
210 |
gtcttgtcacatttttccccattttcatacggattgttagttcgtaatcaaggcatggtaggccatttggaatgggagtggaaccctgcccggctctacc |
309 |
Q |
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| T |
33693259 |
gtcttgtcacatttttccccattttcatacggattgttagttcgtaatcaaggcatggtaggccatttggaatgggagtggaaccctgcccagctctacc |
33693358 |
T |
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| Q |
310 |
tttagcaaagacaaataaggatcatatatagg |
341 |
Q |
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|||| ||||||||||||||||||||||||||| |
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| T |
33693359 |
tttaacaaagacaaataaggatcatatatagg |
33693390 |
T |
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