View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6834_low_7 (Length: 203)
Name: NF6834_low_7
Description: NF6834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6834_low_7 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 52512497 - 52512657
Alignment:
| Q |
1 |
tacataccttggaggaagaatgatatccttgattttgaggaagagtggatttaacaataaaacaacgcgtccttcctgtttgtttgatggaagttggagg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52512497 |
tacataccttggaggaagaatgatatccttgattttgaggaagagtggatttaacaataaaacaacgcgtccttcctgtttgtttgatggaagttggagg |
52512596 |
T |
|
| Q |
101 |
aaggcatcgaggaataacagacgcctgcaaattgcaatccattgagatatgaagaatagag |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52512597 |
aaggcatcgaggaataacagacgcctgcaaattgcaatccattgagatatgaagaatagag |
52512657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University