View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6842_low_3 (Length: 486)

Name: NF6842_low_3
Description: NF6842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6842_low_3
NF6842_low_3
[»] chr1 (11 HSPs)
chr1 (154-473)||(20254382-20254701)
chr1 (297-473)||(21650050-21650226)
chr1 (294-418)||(15861434-15861558)
chr1 (150-235)||(20893509-20893594)
chr1 (294-418)||(22367141-22367265)
chr1 (150-304)||(51452729-51452883)
chr1 (294-381)||(20194185-20194273)
chr1 (294-381)||(25094019-25094106)
chr1 (294-381)||(40436269-40436356)
chr1 (321-412)||(44035006-44035097)
chr1 (150-206)||(20913353-20913409)
[»] chr8 (37 HSPs)
chr8 (150-473)||(22147507-22147830)
chr8 (150-473)||(18612475-18612798)
chr8 (150-473)||(2545015-2545339)
chr8 (150-417)||(16038744-16039012)
chr8 (296-473)||(18619380-18619557)
chr8 (297-473)||(22886396-22886571)
chr8 (297-473)||(3431291-3431467)
chr8 (297-473)||(21494471-21494635)
chr8 (1-72)||(16038596-16038667)
chr8 (150-260)||(3431134-3431245)
chr8 (150-246)||(21494314-21494410)
chr8 (294-439)||(21259499-21259644)
chr8 (1-68)||(2545420-2545486)
chr8 (1-68)||(18612869-18612935)
chr8 (1-68)||(22147911-22147977)
chr8 (150-246)||(22886632-22886728)
chr8 (294-443)||(17502259-17502408)
chr8 (150-305)||(22907086-22907241)
chr8 (294-444)||(23217974-23218124)
chr8 (316-418)||(41506839-41506941)
chr8 (294-447)||(22321454-22321607)
chr8 (1-72)||(21494164-21494236)
chr8 (294-418)||(24385760-24385884)
chr8 (150-305)||(5238323-5238478)
chr8 (150-305)||(24661120-24661275)
chr8 (316-395)||(39115421-39115500)
chr8 (150-305)||(43685782-43685937)
chr8 (314-443)||(4233953-4234082)
chr8 (150-235)||(43373350-43373435)
chr8 (316-392)||(274592-274668)
chr8 (316-392)||(641181-641257)
chr8 (316-392)||(826987-827063)
chr8 (150-224)||(24385610-24385684)
chr8 (154-224)||(41506671-41506741)
chr8 (150-223)||(7000478-7000551)
chr8 (294-378)||(18118289-18118373)
chr8 (414-446)||(22981286-22981318)
[»] chr5 (29 HSPs)
chr5 (150-473)||(17909574-17909897)
chr5 (297-473)||(7528969-7529145)
chr5 (297-473)||(9730393-9730569)
chr5 (297-473)||(108843-109019)
chr5 (294-473)||(16105712-16105890)
chr5 (150-260)||(9730236-9730347)
chr5 (150-306)||(32950930-32951086)
chr5 (150-306)||(34939512-34939669)
chr5 (153-246)||(7529206-7529299)
chr5 (1-68)||(34939750-34939816)
chr5 (1-68)||(17909978-17910044)
chr5 (294-447)||(21650789-21650942)
chr5 (294-395)||(22662683-22662784)
chr5 (294-442)||(25004915-25005063)
chr5 (294-418)||(2031933-2032057)
chr5 (294-418)||(11342808-11342932)
chr5 (150-260)||(108686-108797)
chr5 (151-224)||(25005137-25005210)
chr5 (150-235)||(27182429-27182514)
chr5 (1-72)||(7529380-7529452)
chr5 (294-418)||(21205049-21205173)
chr5 (150-305)||(20623205-20623360)
chr5 (150-305)||(21233400-21233555)
chr5 (150-222)||(2032135-2032207)
chr5 (150-222)||(18530946-18531018)
chr5 (150-305)||(16536433-16536588)
chr5 (150-305)||(37052980-37053135)
chr5 (150-224)||(22053711-22053785)
chr5 (191-305)||(25900319-25900433)
[»] scaffold0001 (4 HSPs)
scaffold0001 (150-473)||(164829-165152)
scaffold0001 (1-68)||(164704-164770)
scaffold0001 (150-235)||(172199-172284)
scaffold0001 (150-235)||(177902-177987)
[»] chr6 (39 HSPs)
chr6 (150-473)||(19629399-19629721)
chr6 (150-473)||(16299844-16300167)
chr6 (297-473)||(32276774-32276950)
chr6 (297-473)||(18823398-18823574)
chr6 (297-473)||(18839253-18839429)
chr6 (294-473)||(4991141-4991319)
chr6 (294-447)||(22585554-22585707)
chr6 (294-447)||(22590385-22590538)
chr6 (150-225)||(13620669-13620744)
chr6 (1-68)||(15741932-15741998)
chr6 (1-72)||(16299696-16299766)
chr6 (294-447)||(15889714-15889867)
chr6 (294-446)||(25640564-25640715)
chr6 (150-246)||(32276617-32276713)
chr6 (1-68)||(19629792-19629858)
chr6 (150-260)||(18823241-18823352)
chr6 (150-260)||(18839096-18839207)
chr6 (154-306)||(35009314-35009467)
chr6 (294-418)||(26089858-26089982)
chr6 (1-72)||(32276469-32276541)
chr6 (1-72)||(18823093-18823163)
chr6 (1-72)||(18838956-18839026)
chr6 (294-447)||(15004915-15005067)
chr6 (150-206)||(15742078-15742134)
chr6 (294-418)||(35015165-35015289)
chr6 (18-72)||(13620536-13620591)
chr6 (294-425)||(18002504-18002635)
chr6 (150-306)||(27751660-27751816)
chr6 (150-224)||(18002353-18002427)
chr6 (150-224)||(26090059-26090133)
chr6 (321-418)||(18583440-18583537)
chr6 (294-395)||(19983300-19983401)
chr6 (150-235)||(23148292-23148377)
chr6 (150-235)||(23153743-23153828)
chr6 (191-306)||(1657660-1657776)
chr6 (294-378)||(17374927-17375011)
chr6 (294-395)||(15742227-15742329)
chr6 (150-224)||(23995247-23995321)
chr6 (294-378)||(19175314-19175398)
[»] chr4 (40 HSPs)
chr4 (150-473)||(19697236-19697559)
chr4 (150-473)||(19707821-19708144)
chr4 (192-473)||(14996196-14996477)
chr4 (150-473)||(9795285-9795607)
chr4 (297-473)||(14500227-14500403)
chr4 (297-473)||(16522887-16523063)
chr4 (297-473)||(9295763-9295939)
chr4 (297-452)||(8045034-8045189)
chr4 (297-473)||(32460718-32460882)
chr4 (1-72)||(9795685-9795756)
chr4 (150-246)||(32460561-32460657)
chr4 (154-260)||(16523109-16523216)
chr4 (150-260)||(8045235-8045346)
chr4 (1-68)||(19020948-19021014)
chr4 (150-225)||(19020792-19020867)
chr4 (294-444)||(34177648-34177797)
chr4 (1-68)||(19697090-19697155)
chr4 (1-68)||(19707675-19707740)
chr4 (151-232)||(40885418-40885499)
chr4 (294-447)||(19559457-19559606)
chr4 (154-260)||(14500074-14500181)
chr4 (1-72)||(16523298-16523368)
chr4 (294-418)||(14951885-14952009)
chr4 (20-72)||(32460430-32460483)
chr4 (1-72)||(14499920-14499992)
chr4 (150-245)||(15674967-15675062)
chr4 (150-305)||(26680436-26680591)
chr4 (316-418)||(5682557-5682659)
chr4 (192-305)||(16327840-16327953)
chr4 (316-393)||(25119237-25119314)
chr4 (150-223)||(55376452-55376525)
chr4 (294-378)||(49071850-49071934)
chr4 (150-224)||(10104128-10104202)
chr4 (251-305)||(13048194-13048248)
chr4 (150-224)||(15135865-15135939)
chr4 (150-224)||(15272169-15272243)
chr4 (150-235)||(13246726-13246811)
chr4 (150-223)||(22738577-22738650)
chr4 (15-72)||(8045424-8045481)
chr4 (294-418)||(15272320-15272444)
[»] scaffold0029 (2 HSPs)
scaffold0029 (150-473)||(49710-50034)
scaffold0029 (1-72)||(49562-49632)
[»] chr3 (54 HSPs)
chr3 (150-473)||(11477053-11477377)
chr3 (191-473)||(8275749-8276031)
chr3 (191-473)||(8268649-8268931)
chr3 (220-473)||(9303032-9303286)
chr3 (297-473)||(14285030-14285206)
chr3 (297-473)||(16933984-16934160)
chr3 (297-473)||(19946767-19946943)
chr3 (150-306)||(11986038-11986194)
chr3 (1-72)||(9302851-9302922)
chr3 (294-446)||(18970016-18970168)
chr3 (294-444)||(48421674-48421824)
chr3 (150-260)||(16933827-16933938)
chr3 (150-225)||(12901965-12902040)
chr3 (294-436)||(15550703-15550845)
chr3 (150-246)||(14285267-14285363)
chr3 (150-246)||(19947004-19947100)
chr3 (1-72)||(11476905-11476975)
chr3 (150-225)||(15938352-15938427)
chr3 (1-72)||(15936360-15936432)
chr3 (1-53)||(12901820-12901872)
chr3 (1-72)||(19947179-19947249)
chr3 (1-70)||(15938202-15938272)
chr3 (321-447)||(38168008-38168134)
chr3 (150-305)||(17912356-17912510)
chr3 (294-378)||(12539069-12539153)
chr3 (294-418)||(30153065-30153189)
chr3 (294-418)||(45581754-45581878)
chr3 (294-418)||(54685309-54685433)
chr3 (150-305)||(13954762-13954917)
chr3 (150-225)||(15936510-15936585)
chr3 (251-305)||(13975695-13975749)
chr3 (251-305)||(45861041-45861095)
chr3 (20-72)||(14285441-14285494)
chr3 (294-395)||(38375696-38375797)
chr3 (321-418)||(54038159-54038256)
chr3 (150-305)||(2449110-2449265)
chr3 (294-393)||(7854130-7854229)
chr3 (328-418)||(2844314-2844404)
chr3 (316-418)||(3992673-3992775)
chr3 (150-224)||(16261777-16261851)
chr3 (316-418)||(33342004-33342106)
chr3 (294-395)||(10913032-10913133)
chr3 (151-224)||(51960990-51961063)
chr3 (294-395)||(55513016-55513117)
chr3 (294-378)||(11402753-11402837)
chr3 (294-418)||(53771164-53771288)
chr3 (150-224)||(53771365-53771439)
chr3 (150-235)||(2050104-2050189)
chr3 (150-187)||(9302999-9303036)
chr3 (150-269)||(54651720-54651838)
chr3 (294-418)||(16261576-16261700)
chr3 (294-378)||(17393597-17393681)
chr3 (328-392)||(17956026-17956090)
chr3 (316-412)||(23492502-23492598)
[»] scaffold0574 (2 HSPs)
scaffold0574 (150-417)||(9370-9638)
scaffold0574 (1-72)||(9219-9291)
[»] scaffold0162 (3 HSPs)
scaffold0162 (150-473)||(11814-12137)
scaffold0162 (151-306)||(8051-8208)
scaffold0162 (150-235)||(26298-26383)
[»] scaffold0037 (2 HSPs)
scaffold0037 (150-391)||(95129-95372)
scaffold0037 (1-54)||(95472-95523)
[»] scaffold0173 (3 HSPs)
scaffold0173 (297-473)||(5290-5466)
scaffold0173 (150-246)||(5527-5623)
scaffold0173 (18-72)||(5691-5745)
[»] scaffold0335 (3 HSPs)
scaffold0335 (297-473)||(5591-5767)
scaffold0335 (150-246)||(5434-5530)
scaffold0335 (22-72)||(5306-5357)
[»] scaffold0207 (3 HSPs)
scaffold0207 (297-473)||(17767-17943)
scaffold0207 (150-260)||(17989-18100)
scaffold0207 (20-72)||(18178-18231)
[»] chr2 (34 HSPs)
chr2 (297-473)||(24826729-24826905)
chr2 (297-473)||(15633282-15633458)
chr2 (297-473)||(17204400-17204576)
chr2 (297-473)||(28031249-28031425)
chr2 (297-464)||(33128122-33128289)
chr2 (294-473)||(25213117-25213295)
chr2 (1-72)||(23777771-23777842)
chr2 (150-310)||(7507715-7507876)
chr2 (150-246)||(28031092-28031188)
chr2 (150-260)||(33128335-33128446)
chr2 (294-446)||(7321612-7321764)
chr2 (1-72)||(17204812-17204883)
chr2 (150-225)||(23777920-23777995)
chr2 (150-306)||(25265261-25265418)
chr2 (150-260)||(17204622-17204733)
chr2 (3-72)||(7507567-7507637)
chr2 (316-418)||(22274845-22274947)
chr2 (316-418)||(22284078-22284180)
chr2 (192-305)||(19689315-19689428)
chr2 (20-72)||(22284444-22284497)
chr2 (316-395)||(9652926-9653005)
chr2 (150-305)||(14906312-14906467)
chr2 (150-305)||(23820307-23820462)
chr2 (251-305)||(17396626-17396680)
chr2 (150-223)||(21142203-21142276)
chr2 (1-72)||(15633690-15633762)
chr2 (1-72)||(22256336-22256408)
chr2 (1-72)||(22275211-22275283)
chr2 (29-72)||(28030971-28031015)
chr2 (150-245)||(24341267-24341362)
chr2 (150-235)||(463032-463117)
chr2 (150-223)||(5888505-5888578)
chr2 (294-395)||(21274057-21274158)
chr2 (294-378)||(20279574-20279658)
[»] chr7 (34 HSPs)
chr7 (297-473)||(371158-371334)
chr7 (150-260)||(371380-371491)
chr7 (294-443)||(39291517-39291666)
chr7 (1-72)||(47480750-47480820)
chr7 (294-447)||(13352046-13352199)
chr7 (150-225)||(18253718-18253793)
chr7 (150-306)||(13321251-13321408)
chr7 (150-306)||(47480902-47481059)
chr7 (150-225)||(15862225-15862300)
chr7 (150-305)||(7293252-7293407)
chr7 (294-365)||(17984756-17984827)
chr7 (150-305)||(30262001-30262156)
chr7 (316-418)||(126538-126640)
chr7 (150-224)||(25124450-25124524)
chr7 (294-418)||(111277-111401)
chr7 (294-378)||(8563347-8563431)
chr7 (150-305)||(11516463-11516618)
chr7 (150-305)||(15441436-15441591)
chr7 (191-305)||(14113902-14114016)
chr7 (251-305)||(14423612-14423666)
chr7 (294-447)||(15977849-15978002)
chr7 (321-418)||(2029044-2029141)
chr7 (150-235)||(36052960-36053045)
chr7 (150-223)||(48622541-48622614)
chr7 (401-473)||(10000484-10000555)
chr7 (1-53)||(18253571-18253622)
chr7 (150-224)||(2029244-2029318)
chr7 (251-305)||(25292311-25292365)
chr7 (150-224)||(42056146-42056220)
chr7 (150-223)||(10000245-10000318)
chr7 (150-235)||(13036896-13036981)
chr7 (150-235)||(16212060-16212145)
chr7 (294-395)||(42056297-42056398)
chr7 (294-418)||(2190194-2190318)
[»] scaffold0615 (3 HSPs)
scaffold0615 (297-473)||(6226-6402)
scaffold0615 (1-72)||(5918-5989)
scaffold0615 (150-260)||(6068-6179)
[»] scaffold0118 (3 HSPs)
scaffold0118 (297-473)||(34423-34599)
scaffold0118 (150-246)||(34266-34362)
scaffold0118 (20-72)||(34135-34188)
[»] scaffold0023 (4 HSPs)
scaffold0023 (297-473)||(61237-61412)
scaffold0023 (154-260)||(61084-61191)
scaffold0023 (1-72)||(60929-61002)
scaffold0023 (150-235)||(48892-48977)
[»] scaffold0367 (2 HSPs)
scaffold0367 (297-473)||(17324-17499)
scaffold0367 (191-260)||(17208-17278)
[»] scaffold0049 (2 HSPs)
scaffold0049 (150-305)||(48423-48578)
scaffold0049 (1-72)||(48656-48727)
[»] scaffold0032 (4 HSPs)
scaffold0032 (150-320)||(13225-13394)
scaffold0032 (1-72)||(13077-13148)
scaffold0032 (401-473)||(13398-13470)
scaffold0032 (321-418)||(55704-55801)
[»] scaffold0028 (1 HSPs)
scaffold0028 (294-473)||(130625-130803)
[»] scaffold0387 (3 HSPs)
scaffold0387 (252-324)||(7127-7199)
scaffold0387 (3-68)||(6908-6972)
scaffold0387 (150-225)||(7053-7128)
[»] scaffold0125 (2 HSPs)
scaffold0125 (150-306)||(41883-42039)
scaffold0125 (11-72)||(42117-42177)
[»] scaffold0507 (1 HSPs)
scaffold0507 (294-444)||(1509-1659)
[»] scaffold0075 (2 HSPs)
scaffold0075 (150-306)||(34331-34488)
scaffold0075 (1-72)||(34182-34253)
[»] scaffold1295 (1 HSPs)
scaffold1295 (294-444)||(203-353)
[»] scaffold0361 (2 HSPs)
scaffold0361 (150-306)||(3425-3578)
scaffold0361 (22-72)||(3655-3706)
[»] scaffold0132 (1 HSPs)
scaffold0132 (158-306)||(13741-13890)
[»] scaffold0084 (1 HSPs)
scaffold0084 (246-306)||(56067-56127)
[»] scaffold0063 (1 HSPs)
scaffold0063 (294-447)||(44122-44275)
[»] scaffold0026 (1 HSPs)
scaffold0026 (150-225)||(108052-108127)
[»] scaffold0057 (1 HSPs)
scaffold0057 (294-447)||(5977-6130)
[»] scaffold0303 (3 HSPs)
scaffold0303 (294-418)||(36-160)
scaffold0303 (150-206)||(4304-4360)
scaffold0303 (328-418)||(4489-4579)
[»] scaffold0116 (1 HSPs)
scaffold0116 (316-418)||(30217-30319)
[»] scaffold0004 (2 HSPs)
scaffold0004 (316-418)||(193518-193620)
scaffold0004 (321-418)||(186561-186658)
[»] scaffold0601 (1 HSPs)
scaffold0601 (294-395)||(880-981)
[»] scaffold0465 (1 HSPs)
scaffold0465 (294-395)||(9991-10092)
[»] scaffold0184 (1 HSPs)
scaffold0184 (321-418)||(31315-31412)
[»] scaffold0078 (2 HSPs)
scaffold0078 (321-418)||(41432-41529)
scaffold0078 (251-305)||(37039-37093)
[»] scaffold0706 (1 HSPs)
scaffold0706 (294-418)||(6551-6675)
[»] scaffold0467 (1 HSPs)
scaffold0467 (154-225)||(10218-10289)
[»] scaffold0231 (1 HSPs)
scaffold0231 (294-393)||(12733-12832)
[»] scaffold0124 (1 HSPs)
scaffold0124 (150-305)||(1454-1609)
[»] scaffold0597 (1 HSPs)
scaffold0597 (328-418)||(1020-1110)
[»] scaffold0234 (1 HSPs)
scaffold0234 (316-418)||(17434-17536)
[»] scaffold0079 (1 HSPs)
scaffold0079 (321-447)||(3876-4002)
[»] scaffold0160 (1 HSPs)
scaffold0160 (150-223)||(339-412)
[»] scaffold0251 (2 HSPs)
scaffold0251 (294-418)||(13394-13518)
scaffold0251 (150-224)||(13243-13317)
[»] scaffold0175 (1 HSPs)
scaffold0175 (316-392)||(15098-15174)
[»] scaffold0141 (2 HSPs)
scaffold0141 (150-305)||(22776-22931)
scaffold0141 (150-305)||(27031-27186)
[»] scaffold0066 (2 HSPs)
scaffold0066 (150-225)||(45337-45412)
scaffold0066 (25-72)||(45491-45539)
[»] scaffold0011 (1 HSPs)
scaffold0011 (150-233)||(123045-123128)
[»] scaffold0009 (1 HSPs)
scaffold0009 (152-235)||(272319-272402)
[»] scaffold0498 (1 HSPs)
scaffold0498 (150-224)||(9183-9257)
[»] scaffold0266 (2 HSPs)
scaffold0266 (150-224)||(3466-3540)
scaffold0266 (150-235)||(1419-1504)
[»] scaffold0516 (1 HSPs)
scaffold0516 (150-223)||(12002-12075)
[»] scaffold0317 (1 HSPs)
scaffold0317 (294-439)||(12603-12748)
[»] scaffold0158 (1 HSPs)
scaffold0158 (150-223)||(25532-25605)
[»] scaffold0065 (1 HSPs)
scaffold0065 (294-379)||(67897-67982)
[»] scaffold0025 (1 HSPs)
scaffold0025 (150-235)||(146895-146980)
[»] scaffold0017 (1 HSPs)
scaffold0017 (150-223)||(54182-54255)
[»] scaffold0012 (1 HSPs)
scaffold0012 (150-235)||(247324-247409)


Alignment Details
Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 154 - 473
Target Start/End: Complemental strand, 20254701 - 20254382
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttgttg 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  20254701 gagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttccttgttg 20254602  T
Q  254 tatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaatt 353  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20254601 tatgaaatgggttgattggaatgaattgataattgttgttaaatccgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaatt 20254502  T
Q  354 gttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtga 453  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20254501 gttggtgatgaaataacatgttcataatgtatgaaaatgagttgttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgaggtga 20254402  T
Q  454 gaatcaagttttaattgatg 473  Q
    ||||||||||||||||||||    
T  20254401 gaatcaagttttaattgatg 20254382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 21650050 - 21650226
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21650050 ttcgtgctcttgttttggtgataagattgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 21650149  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  21650150 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattaaggtgagaatcaagtttcaattgatg 21650226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 15861434 - 15861558
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  15861434 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 15861533  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  15861534 gtagtttgtaaattatgctcaattg 15861558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 20893509 - 20893594
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | |||||||||||||||||| || ||| |||||||||| || |||||||    
T  20893509 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcattttgt 20893594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 22367265 - 22367141
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||     
T  22367265 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatga 22367166  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  22367165 gtagtttgtaaattatgctcaattg 22367141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 51452883 - 51452729
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  || |||||||| | ||| |  |||||||||| | |    
T  51452883 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcttaatcatgttcattct--ttgcaatttttcat 51452786  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgct 304  Q
    |  ||||||||||||||||||   |||||||| ||||||||||| ||||||||||||    
T  51452785 gatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgct 51452729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 20194273 - 20194185
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagttt-gagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataat 381  Q
    ||||||||||||||||| || ||||| |||| |||||| | ||||   |||||| |||||||||| |||||||||  ||||||||||||    
T  20194273 aaattcgtgctcttgttatgatgatatgttttgagtatatgaatttggtgataattgaattgttgttgatgaaattgcatgttcataat 20194185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 381
Target Start/End: Complemental strand, 25094106 - 25094019
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataat 381  Q
    ||||||||||||||||| || ||||| |||||||||  | ||||   |||||| |||||||||| |||||||||  ||||| ||||||    
T  25094106 aaattcgtgctcttgttatgatgatatgtttgagtacatgaatttggtgataattgaattgttgttgatgaaattgcatgtccataat 25094019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 381
Target Start/End: Original strand, 40436269 - 40436356
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataat 381  Q
    ||||||||||||||||| || ||||| |||||| ||| | || |   |||||| |||||||||| |||||||||  ||||||||||||    
T  40436269 aaattcgtgctcttgttatgatgatatgtttgaatatatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataat 40436356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 412
Target Start/End: Original strand, 44035006 - 44035097
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgct 412  Q
    |||||| ||||||||||  ||| | |||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   ||||||||||    
T  44035006 gtttgaatatgttaatttgatgtttaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgct 44035097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 20913409 - 20913353
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggtt 206  Q
    |||||||||||||||||||| ||||| | ||| ||| | | ||||||||||||||||    
T  20913409 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggtt 20913353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 22147830 - 22147507
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| || || |||||||||||||||||| |||||||| |||||||||||    
T  22147830 ttaggagctaaggtgaagctcaagtttgaattgatcataacctaaggtaaggggtttagtgttcttcataatcatgattgttttgttttcaattttcctt 22147731  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22147730 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 22147631  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22147630 aattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgag 22147531  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    ||||||||||| ||||||||||||    
T  22147530 gtgagaatcaaattttaattgatg 22147507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 18612798 - 18612475
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||||    
T  18612798 ttaggagctaaagtgaagcccaaatttgaattgatcataacctaaggtaagggggttagtgttcttcacaatcatgattgttttgtttgcaattttcctt 18612699  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18612698 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 18612599  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18612598 aattgttggtgatgaaataacatgttcataatgtatgaaaatggattgttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgag 18612499  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    |||  ||||||| |||||||||||    
T  18612498 gtggaaatcaagatttaattgatg 18612475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 2545339 - 2545015
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||  || |||||||| |||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||    
T  2545339 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtcttcatcataatcatgattgttttgtttgcaattttcctt 2545240  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaa-ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  2545239 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctcttattttggtaataagtttgagtatgttaattgaatgataaat 2545140  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattga 448  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||| ||| | |||||||||||||||||| |||| | ||||||||||||||||||||    
T  2545139 gaattgttggtgatgaaataacatattcataatgtgtgaaaatgggtagttgtaaaattatgcttaattgatgaattataacatgttgttgttgaattga 2545040  T
Q  449 ggtgagaatcaagttttaattgatg 473  Q
    |||| ||||||||||| ||||||||    
T  2545039 ggtgggaatcaagtttcaattgatg 2545015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 150 - 417
Target Start/End: Original strand, 16038744 - 16039012
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||||||||| ||    
T  16038744 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcatgattgttttgtttgcaattttcttt 16038843  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttg-ttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16038844 gttgtatgaaatgggttgattggaatgaattgataattgttgtttaaattcgtgctcttgttttggtgagaagtttgagtatgttaattgaatgataaat 16038943  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaatt 417  Q
    ||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||||    
T  16038944 gaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaatt 16039012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 296 - 473
Target Start/End: Complemental strand, 18619557 - 18619380
Alignment:
Q  296 attcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggt 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  18619557 attcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatggat 18619458  T
Q  396 tgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  18619457 tgttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgaggtggaaatcaagatttaattgatg 18619380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 22886571 - 22886396
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22886571 ttcgtgctcttgttttggtaataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 22886472  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| || | ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  22886471 gttgtgaaattatgcttaattgatgaactatgacatgttgttg-tgaattgaggtgagaatcaagtttcaattgatg 22886396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 3431291 - 3431467
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  3431291 ttcgtgctcttgttttggtgataagattgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgagtt 3431390  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||| |||||||||||||||||  |||||||    
T  3431391 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattaaggtgagaatcaagtttcgattgatg 3431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 21494471 - 21494635
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||     
T  21494471 ttcgtgctcttgttttggtgataattttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaaggggta 21494570  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| ||||||||||||||||||            |||||||||||| ||||||||||||||||||||| ||||||||    
T  21494571 gttgtgaaattatgcttaattg------------atgttgttgttggattgaggtgagaatcaagtttcaattgatg 21494635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16038596 - 16038667
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16038596 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 16038667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 3431134 - 3431245
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  3431134 ttaggagctaaagtgaagcccaagtttggattgatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 3431232  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  3431233 ggtttgtatgaaa 3431245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 21494314 - 21494410
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  21494314 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttc 21494410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 439
Target Start/End: Original strand, 21259499 - 21259644
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| |||||| ||| |||||||||  ||||||||| ||||||  ||||||    
T  21259499 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtatataaatgg 21259598  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttg 439  Q
    || |||    |||| |||| ||||||| ||||||||||||||||||    
T  21259599 gtagtttgtgaattgtgctcaattgatgaattgtgacatgttgttg 21259644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2545486 - 2545420
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  2545486 caattgagtgggaacacacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 2545420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18612935 - 18612869
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18612935 caattgagtgggaacacacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 18612869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22147977 - 22147911
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  22147977 caattgagtgggaacacacctaaacctaaaa-ttggagagaaattcattcattcatttcatttcacaa 22147911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 22886728 - 22886632
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||| || ||  |||||||||| ||| |||| ||||||||||||    
T  22886728 ttaggagctaaagtgaagcttaagtttggattaatcattacctaaggtaagggggttagtcttaatcataatcataattgttttttttgcaattttc 22886632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 443
Target Start/End: Complemental strand, 17502408 - 17502259
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||| |||||| |||| | |||||| |||||||||||||||||  ||||| | |||||||||  |||||||||  ||||||||| ||||||  ||| ||    
T  17502408 aaatttgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttcatgatgtatataaaagg 17502309  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttga 443  Q
    || |||    ||||||| | ||||||| |||| ||||||||| |||||||    
T  17502308 gtagtttgtgaattatgttcaattgatgaattatgacatgtttttgttga 17502259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 22907086 - 22907241
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  22907086 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 22907183  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  22907184 gatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 22907241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 444
Target Start/End: Complemental strand, 23218124 - 23217974
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||  | |||||| |||||||||||||||||  ||||| | |||||||||  |||||||||  |||||| || ||||||  ||||||    
T  23218124 aaattcgtgcttatgtggtagtgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttaatgatgtatataaatgg 23218025  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaa 444  Q
     | |||    ||||||| | ||||||| |||| ||||||||||||||||||    
T  23218024 ctagtttgtgaattatgttcaattgatgaattatgacatgttgttgttgaa 23217974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 418
Target Start/End: Original strand, 41506839 - 41506941
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||    
T  41506839 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 41506938  T
Q  416 ttg 418  Q
    |||    
T  41506939 ttg 41506941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 22321454 - 22321607
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||||||||||  ||| | | |||| |||||| ||||||||||  ||| ||| |||||||||| |||||||||  || |||||| | |||| |||||||    
T  22321454 aaattcgtgctcaggttgtagagatatgtttgaatatgttaatttgatgttaattgaattgttgatgatgaaattgcaagttcatgacgtatgaaaatgg 22321553  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||   |||||||||| ||||| | |||| | ||||||| ||||| |||||    
T  22321554 gtagtttgtaaattatgctcaattggtgaattataacatgttattgttaaattg 22321607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21494164 - 21494236
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||| ||| || | ||||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  21494164 caattgagttggagcatatctaaacctaaaacttggagagaaatccattcattccttttcatttcacaaagtt 21494236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 24385760 - 24385884
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| |||| |||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  24385760 aaattcgtgcttatgttgtagagatatgtttgaatatgataatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 24385859  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  24385860 gtagtttgtaaattatgctcaattg 24385884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 5238478 - 5238323
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  5238478 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 5238381  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  5238380 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 5238323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 24661120 - 24661275
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  24661120 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 24661217  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  24661218 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 24661275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 395
Target Start/End: Complemental strand, 39115500 - 39115421
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggt 395  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||||    
T  39115500 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggt 39115421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 43685937 - 43685782
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  43685937 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 43685840  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  43685839 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 43685782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 443
Target Start/End: Complemental strand, 4234082 - 4233953
Alignment:
Q  314 gtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgctt 413  Q
    |||||| |||||||||||||||||  ||||| | |||||||||  |||||||||  |||||| || ||||||  |||||||| |||    ||||||  |     
T  4234082 gtgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgtttatgatgtatataaatgggtagtttgtgaattattttc 4233983  T
Q  414 aattgattaattgtgacatgttgttgttga 443  Q
    ||||||| |||| ||||| |||||||||||    
T  4233982 aattgatgaattatgacaagttgttgttga 4233953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 43373350 - 43373435
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  43373350 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 43373435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 274668 - 274592
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatg 392  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||    
T  274668 gatatgtttgaatatgttaatttgatgctaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatg 274592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 641181 - 641257
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatg 392  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||    
T  641181 gatatgtttgaatatgttaatttgatgctaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatg 641257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 392
Target Start/End: Original strand, 826987 - 827063
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatg 392  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||    
T  826987 gatatgtttgaatatgttaatttgatgctaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatg 827063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 24385610 - 24385684
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  24385610 ttaggagctaaagtgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 41506671 - 41506741
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||| ||||||| |||||||  || ||| | | |||||||||||||||| |||||| ||||||||||    
T  41506671 gagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatcataatcat 41506741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7000478 - 7000551
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||| ||||||| |||||||  || ||| | | |||| ||||||||||| |||||| |||||||||    
T  7000478 ttaggagctaaattgaagcctaagtttgggttaatccttatctaaagtaagggggttagttttcatcataatca 7000551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 18118289 - 18118373
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    |||||||||||| |||| | | |||| ||||| |||| | ||||  ||||||| |||||||||| |||||||||  |||||||||    
T  18118289 aaattcgtgctcgtgttatagagatatgtttgcgtatataaatttgatgataattgaattgttgttgatgaaattgcatgttcat 18118373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 414 - 446
Target Start/End: Complemental strand, 22981318 - 22981286
Alignment:
Q  414 aattgattaattgtgacatgttgttgttgaatt 446  Q
    ||||||| |||||||||||||||||||||||||    
T  22981318 aattgatgaattgtgacatgttgttgttgaatt 22981286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 17909897 - 17909574
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||||||||||||    
T  17909897 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgttagcaattttcctt 17909798  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17909797 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 17909698  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17909697 aattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgag 17909598  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    ||||||||||||||||||||||||    
T  17909597 gtgagaatcaagttttaattgatg 17909574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 7529145 - 7528969
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||     
T  7529145 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcatagtgtatgaaaatgggta 7529046  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  7529045 gttgtgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagtttcaattgatg 7528969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 9730393 - 9730569
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9730393 ttcgtgctcttgttttggtgataagattgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 9730492  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||| |||||||||||||||||  |||||||    
T  9730493 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattaaggtgagaatcaagtttcgattgatg 9730569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 108843 - 109019
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||    
T  108843 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaattaacatgttcataatgtatgaaaatggatt 108942  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  108943 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattggggtgtgaatcaagtttcaattgatg 109019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 16105890 - 16105712
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  |||||||||||| || ||||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  16105890 aaattcgtgcttatgttgtagagatatgtttggatatgttaattga-tgttaaatgaatggttgatgatgaaataatatgttcataatgtatgaaaatgg 16105792  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  16105791 gttgttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattggggtgtgaatcaagtttcaattgatg 16105712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 9730236 - 9730347
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  9730236 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 9730334  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  9730335 ggtttgtatgaaa 9730347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 32951086 - 32950930
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattt-tcct 248  Q
    |||||||||||| ||||| | ||||||||||| ||||| |  ||||||||||||||| || ||| |||||| |||| | | ||   |||||| || ||||    
T  32951086 ttaggagctaaattgaagtctaagtttgaattaatcattatttaaggtaagggggttagtcttcatcataaccatgttcaatta--ttgcaacttctcct 32950989  T
Q  249 t-gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32950988 ttgttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctct 32950930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 34939669 - 34939512
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    |||||||||||||||||| | |||| |||||| |||||||||||||||||||||||| || ||||||||||||||| | ||||   |||||||||  |      
T  34939669 ttaggagctaaagtgaagtctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgttcattt--attgcaatttctcat 34939572  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||| ||||||||| | |||| ||| ||||| ||||| ||||||||||||||    
T  34939571 ttgttgtatgaatatgggttgaattgaataaatggataactgttgctaaattcgtgctct 34939512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 7529299 - 7529206
Alignment:
Q  153 ggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    ||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| || |||||||||||||| ||| |||||||||||||||||    
T  7529299 ggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcataattgttttgtttgcaattttc 7529206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34939816 - 34939750
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  34939816 caattgagtgggaacacacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 34939750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17910044 - 17909978
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  17910044 caattgagtgggaacacacctaaacctaaa-cttggagagaaattcatttattcatttcatttcacaa 17909978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 21650942 - 21650789
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  21650942 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 21650843  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacat-gttgttgttgaattg 447  Q
    || |||   |||||||||| ||||| | |||| || ||| |||||||||||||||    
T  21650842 gtagtttgtaaattatgctcaattggtgaattatg-catggttgttgttgaattg 21650789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 22662683 - 22662784
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | ||||||  ||||| ||||||||||  ||||||| |||||||||| |||||||||  ||||||||| ||||||  ||||||    
T  22662683 aaattcgtgctcatgttgtagtgatatatttgaatatgttaatttgatgataattgaattgttgatgatgaaattgcatgttcatgatgtatataaatgg 22662782  T
Q  394 gt 395  Q
    ||    
T  22662783 gt 22662784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 442
Target Start/End: Complemental strand, 25005063 - 25004915
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| ||||   |||||| |||||||| |||||||| || ||||| |||||||||  | |||||||  ||||||||| ||||||  ||||||    
T  25005063 aaattcgtgctcatgttgaagtgatatgtttgagtgtgttaatttaaggataattgaattgttaattatgaaattgcatgttcatgatgtatgtaaatgg 25004964  T
Q  394 gttgttatga-aattatgcttaattgattaattgtgacatgttgttgttg 442  Q
    || ||| ||| ||||||||| ||||| | | || ||||||||||||||||    
T  25004963 gtagtt-tgagaattatgctcaattggtgatttatgacatgttgttgttg 25004915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 2032057 - 2031933
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  2032057 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 2031958  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  2031957 gtagtttgtaaattatgctcaattg 2031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 11342932 - 11342808
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  11342932 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 11342833  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  11342832 gtagtttgtaaattatgctcaattg 11342808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 108686 - 108797
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  108686 ttaggaggtaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 108784  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  108785 ggtttgtatgaaa 108797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 25005210 - 25005137
Alignment:
Q  151 taggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    ||||||||||||||||||| ||||||| ||| ||||| | |||| ||||||||||| || ||| ||||||||||    
T  25005210 taggagctaaagtgaagcctaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatcat 25005137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 27182429 - 27182514
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | |||||||||||||||||| || ||| |||||||||| || |||||||    
T  27182429 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcattttgt 27182514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 7529452 - 7529380
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||| ||| || | | ||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  7529452 caattgagttggagcatatcgaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 7529380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 21205173 - 21205049
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  21205173 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 21205074  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  21205073 gtagtttgtaaattatgctcaattg 21205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 20623360 - 20623205
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  20623360 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 20623263  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  20623262 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 20623205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 21233400 - 21233555
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  21233400 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 21233497  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  21233498 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 21233555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 2032207 - 2032135
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatc 222  Q
    |||||||||||| ||||||| |||||||  || ||| | | |||||||||||||||| |||||| ||||||||    
T  2032207 ttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatcataatc 2032135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 18530946 - 18531018
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatc 222  Q
    |||||||||||||||||||| |||||    || ||||||| |||||||||||||||| || ||| ||||||||    
T  18530946 ttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 18531018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 16536588 - 16536433
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | ||||| |||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  16536588 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 16536491  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  16536490 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 16536433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 37053135 - 37052980
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  37053135 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 37053038  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| |||| |||||||||   |||||||| ||||||||||| |||||||||||||    
T  37053037 gatttggatgagatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 37052980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 22053711 - 22053785
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||| | |||||    || ||||||| |||||||||||||||| || ||| ||||||||||    
T  22053711 ttaggagctaaagtgaagtctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 22053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 305
Target Start/End: Original strand, 25900319 - 25900433
Alignment:
Q  191 ctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattg 288  Q
    |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | ||  ||| ||||||||||||||   |||||||  ||||||||    
T  25900319 ctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaacggataattg 25900416  T
Q  289 ttgttaaattcgtgctc 305  Q
    ||| |||||||||||||    
T  25900417 ttgctaaattcgtgctc 25900433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 276; Significance: 1e-154; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 150 - 473
Target Start/End: Original strand, 164829 - 165152
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||  || |||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  164829 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttcctt 164928  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  164929 gttgtatgaaatggattgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 165028  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  165029 aattgttggtgatgaaataacatgttcataatgtatgaaaatgggttcttatgaaattatgcttaattgatgaattatgacatgttgttgttgaattgag 165128  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    ||||||||||||||||||||||||    
T  165129 gtgagaatcaagttttaattgatg 165152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 164704 - 164770
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  164704 caattgagtgggaacacacctaaacctaaa-cttggagagaaattccttcattcatttcatttcacaa 164770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 172284 - 172199
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  172284 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 172199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 177987 - 177902
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  177987 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 177902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 276; Significance: 1e-154; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 19629721 - 19629399
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  19629721 ttaggagctaa-gtgaagctcaaatttgaattgatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttggaattttcctt 19629623  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19629622 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttgtggtgataagtttgagtatgttaattgaatgataaatg 19629523  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19629522 aattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgag 19629423  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    |||||||||||| |||||||||||    
T  19629422 gtgagaatcaagatttaattgatg 19629399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 150 - 473
Target Start/End: Original strand, 16299844 - 16300167
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||    
T  16299844 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcttaatcatgattgttt-gtttgcaattttcctt 16299942  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaa-ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16299943 gttgtatgaaatgggttgattagaatgaattgataattgttgttaaaattcgtgctcttgtttcggtgataagtttgagtatgttaattgaatgataaat 16300042  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattga 448  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  16300043 gaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcctaattgataaattatgacatgttgtggttgaattga 16300142  T
Q  449 ggtgagaatcaagttttaattgatg 473  Q
    |||||||||||||||| ||||||||    
T  16300143 ggtgagaatcaagtttcaattgatg 16300167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 32276774 - 32276950
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  32276774 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggta 32276873  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  32276874 gttgtgaaattatgcttaattgatgaattgtgacatgttattgttgaattgaggtgagaatcaagtttcaattgatg 32276950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 18823398 - 18823574
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18823398 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 18823497  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||| ||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  18823498 gttgtgaagttatgcttaattgatgacttatgacatgttgttgttgaattgcggtgtgaatcaagtttcaattgatg 18823574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 18839253 - 18839429
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18839253 ttcgtgctcttgttttggtgataagtttgagtatgttaactgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 18839352  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || ||||||||| ||||||||||| |||| ||||||||||| ||||||||    
T  18839353 gttgtgaaattatgcttaattgatgacttatgacatgttattgttgaattggggtgtgaatcaagtttcaattgatg 18839429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 4991319 - 4991141
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||| |||| || ||||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  4991319 aaattcgtgcttatgttgtagagatatgtttggatatgttatttga-tgttaaatgaatggttgatgatgaaataatatgttcataatgtatgaaaatgg 4991221  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||| |||||||||||||||||||| | || |||||||||||||||||||||  ||| ||||||||||| ||||||||    
T  4991220 gttgttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattggtgtgtgaatcaagtttcaattgatg 4991141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 22585554 - 22585707
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||| ||||||  ||||||| |||||||||| |||||||||  ||||||||| ||||||  ||||||    
T  22585554 aaattcgtgctcatgttgtagtgatatgtttgagtattttaatttgatgataattgaattgttgatgatgaaattgcatgttcatgatgtatataaatgg 22585653  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    ||||||||| ||||||  |||| |||||||||||||||||||||    
T  22585654 gtagtttgtgaattatgctcaattgaagaattatgacatgttgttgttgaattg 22585707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 22590385 - 22590538
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||| ||||||  ||||||| |||||||||| |||||||||  ||||||||| ||||||  ||||||    
T  22590385 aaattcgtgctcatgttgtagtgatatgtttgagtattttaatttgatgataattgaattgttgatgatgaaattgcatgttcatgatgtatataaatgg 22590484  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    ||||||||| ||||||  |||| |||||||||||||||||||||    
T  22590485 gtagtttgtgaattatgctcaattgaagaattatgacatgttgttgttgaattg 22590538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 13620669 - 13620744
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  13620669 ttaggagctaaagtgaagcctgagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcatg 13620744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15741932 - 15741998
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15741932 caattgagtgggaacacacctaaacctaaaa-ttggagagaaattcattcattcatttcatttcacaa 15741998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16299696 - 16299766
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||    
T  16299696 caattgagtgggaacacacctaaacttaaa-cttggagagaaattcattcattcatttcatttcacaaagtt 16299766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 15889714 - 15889867
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| ||| |||||| |||||||||  ||||||||| ||||||  ||||||    
T  15889714 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgatttgttgatgatgaaattgcatgttcatgatgtatataaatgg 15889813  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    ||||||| | || |||| |||| ||||||||||||| |||||||    
T  15889814 gtagtttgtgaattatgttcaactgatgaattatgacatgttgttgatgaattg 15889867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 446
Target Start/End: Original strand, 25640564 - 25640715
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | | |||| |||||||||||||||||  ||||||| |||||| ||| |||||||||  ||||||||| |||||   ||||||    
T  25640564 aaattcgtgctcatgttgtag-gatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtagataaatgg 25640662  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaatt 446  Q
    || |||    |||| |||| ||||||| |||||||||||||||||||||||||    
T  25640663 gtagtttgtgaattgtgctcaattgatgaattgtgacatgttgttgttgaatt 25640715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 32276617 - 32276713
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| || ||| |||||||||| ||| |||||||||||||||||    
T  32276617 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcataattgttttgtttgcaattttc 32276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19629858 - 19629792
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  19629858 caattgagtgggaacacacctaaacctaaa-cttggggagaaattcattcattcatttcatttcacaa 19629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 18823241 - 18823352
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||   ||||||| ||| |||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  18823241 ttaggagctaaagtgaagtttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 18823339  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  18823340 ggtttgtatgaaa 18823352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 18839096 - 18839207
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||| ||||||||||||||  ||||||| ||| |||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  18839096 ttagaagctaaagtgaagcttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 18839194  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  18839195 ggtttgtatgaaa 18839207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 35009314 - 35009467
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc--ttgt 251  Q
    |||||||||||||||| ||||||| ||| ||||| | |||| ||||||||||| || ||| ||||||||||| | ||||   |||||||||  |  ||||    
T  35009314 gagctaaagtgaagccaaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatcatgttcattt--attgcaatttctcatttgt 35009411  T
Q  252 tgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||| ||||||||| | |||  ||| ||||||||||| ||||||||||||||    
T  35009412 tgtatgaatatgggttgaattgaagaaatggataattgttgctaaattcgtgctct 35009467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 26089982 - 26089858
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || ||||||||||||| |||||||    
T  26089982 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcataatgtatgaaaatgg 26089883  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  26089882 gtagtttgtaaattatgctcaattg 26089858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32276469 - 32276541
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||| ||| || ||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  32276469 caattgagttggagcatacctaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 32276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18823093 - 18823163
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||| | | || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  18823093 caattgagttgtagcatacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaaagtt 18823163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 18838956 - 18839026
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||| | | || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  18838956 caattgagttgtagcatacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaaagtt 18839026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 15004915 - 15005067
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||| | |||| || | | |||||||||| ||| |||||  |||||| || ||||||  ||||||    
T  15004915 aaattcgtgctcatgttgtagtgatatgtttgagtatgtaatttga-tgttgattgaattgttgatgaggaaattgcatgtttatgatgtatataaatgg 15005013  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    ||||||| | ||||||| |||| |||||||||||||||||||||    
T  15005014 gtagtttgtgaattatgttcaattgatgaattatgacatgttgttgttgaattg 15005067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 15742078 - 15742134
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggtt 206  Q
    |||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||    
T  15742078 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggtt 15742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 35015165 - 35015289
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  35015165 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 35015264  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  35015265 gtagtttgtaaattatgctcaattg 35015289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 13620536 - 13620591
Alignment:
Q  18 acctaaacctaaaacttggagaggaattcattcattca-tttcatttcacaaagtt 72  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  13620536 acctagacctaaaacttggagagaaattcattcattcattttcatttcacaaagtt 13620591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 425
Target Start/End: Original strand, 18002504 - 18002635
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| |||||| |||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  18002504 aaattcgtgcttatgttgtagagatatgtttgaatatgttcatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 18002603  T
Q  394 gttgttatgaaattatgcttaattgattaatt 425  Q
    || |||   |||||||||| ||||||| ||||    
T  18002604 gtagtttgtaaattatgctcaattgatgaatt 18002635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 27751816 - 27751660
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattt-tcct 248  Q
    |||||||||||| ||||||| ||||||| ||| ||| | | |||||||||||||||| || ||| ||||||||||| | ||||   ||||||||| || |    
T  27751816 ttaggagctaaattgaagcctaagtttggattaatctttatctaaggtaagggggttagtcttcatcataatcatgttcattt--attgcaatttctcat 27751719  T
Q  249 tgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |  |||||||| ||||||||| | |||| ||| ||||| ||| | ||||||||||||||    
T  27751718 ttgtgtatgaatatgggttgaattgaataaatggataaatgtagctaaattcgtgctct 27751660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 18002353 - 18002427
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||| | ||||||  ||| |||||||||||||||||||||||| || ||  ||||||||||    
T  18002353 ttaggagctaaagtgaaggctaagtttagattaatcataacctaaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 26090133 - 26090059
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||||  ||||| ||| |||||||||||||||||| || ||  ||||||||||    
T  26090133 ttaggagctaaagtgaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 18583537 - 18583440
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  18583537 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 18583440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 19983300 - 19983401
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  19983300 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 19983399  T
Q  394 gt 395  Q
    ||    
T  19983400 gt 19983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 23148377 - 23148292
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | |||||||||||||||||| || ||| |||||||||| || |||||||    
T  23148377 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcattttgt 23148292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 23153828 - 23153743
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | |||||||||||||||||| || ||| |||||||||| || |||||||    
T  23153828 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcattttgt 23153743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 1657660 - 1657776
Alignment:
Q  191 ctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc--ttgttgtatgaa-atgggttgattggaatgaattgataatt 287  Q
    |||||||||||||||| || ||| ||||||||||| | ||||   |||||||||  |  |||||||||||| ||||||||| | |||| ||| |||||||    
T  1657660 ctaaggtaagggggttagtcttcatcataatcatgttcattta--ttgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataatt 1657757  T
Q  288 gttgttaaattcgtgctct 306  Q
    |||| ||||||||||||||    
T  1657758 gttgctaaattcgtgctct 1657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 17374927 - 17375011
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    ||||||||||||| ||| | |||||| ||||||||||| |||||   |||||| |||||| ||| ||||||||| ||||||||||    
T  17374927 aaattcgtgctctagttgtagtgatatgtttgagtatgctaatttgttgataattgaattattgatgatgaaattacatgttcat 17375011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 15742227 - 15742329
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgat-aaatgaattgttggtgatgaaataacatgttcataatgtattaaaatg 392  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||||| ||||||||||||| |||||||||  || |||||| |||||| ||||||    
T  15742227 aaattcgtgcttatgttgtagagatatgtttgattatgttaatttgatgattaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatg 15742326  T
Q  393 ggt 395  Q
    |||    
T  15742327 ggt 15742329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 23995321 - 23995247
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  23995321 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 19175398 - 19175314
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    ||||| ||||||||||| || ||||| |||||||||| | || |  ||||||| |||||||||| |||| ||||  |||||||||    
T  19175398 aaatttgtgctcttgttatgatgatatgtttgagtatataaaattgatgataattgaattgttgttgataaaattgcatgttcat 19175314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 150 - 473
Target Start/End: Original strand, 19697236 - 19697559
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||||| |||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  19697236 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttcctt 19697335  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19697336 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataattttgagtatgttaattgaatgataaatg 19697435  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    ||||||| || ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  19697436 aattgttagttatgaaataacatgttcataatgtatgagaatgagttgttatgaaattatgcttaattgatgaattatgacatgttgttgttgaattgag 19697535  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    ||||||||||||||||||||||||    
T  19697536 gtgagaatcaagttttaattgatg 19697559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 150 - 473
Target Start/End: Original strand, 19707821 - 19708144
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||||| |||| |||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  19707821 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttcctt 19707920  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19707921 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataattttgagtatgttaattgaatgataaatg 19708020  T
Q  350 aattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgag 449  Q
    ||||||| || ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  19708021 aattgttagttatgaaataacatgttcataatgtatgagaatgagttgttatgaaattatgcttaattgatgaattatgacatgttgttgttgaattgag 19708120  T
Q  450 gtgagaatcaagttttaattgatg 473  Q
    ||||||||||||||||||||||||    
T  19708121 gtgagaatcaagttttaattgatg 19708144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 192 - 473
Target Start/End: Complemental strand, 14996477 - 14996196
Alignment:
Q  192 taaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttgttgtatgaaatgggttgattggaatgaattgataattgttg 291  Q
    ||||||||||||||| ||| |  |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14996477 taaggtaagggggttagttattatcataatcatgattgttttgtttgcaattttccttgttgtatgaaatggattgattggaatgaattgataattgttg 14996378  T
Q  292 ttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaat 391  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  14996377 ttaaattcctgctcttgttttggtgataagtttgagtatgttaattgaatgataaaagaattgttggtgatgaaataacatgttcataatgtatgaaaat 14996278  T
Q  392 gggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14996277 gggttgttgtgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 14996196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 9795607 - 9795285
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| | | ||| ||  || |||  | |    
T  9795607 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttatcatcataatcatgttcaatttttt--cattttctcat 9795510  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaa-ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9795509 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 9795410  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattga 448  Q
    ||||| ||||||||||||||||||||||||||||| | |||||| || ||| |||||||||| ||||||| | |||| ||||||||||||||||||||||    
T  9795409 gaattcttggtgatgaaataacatgttcataatgtgtcaaaatgagtagttgtgaaattatgtttaattggtgaattatgacatgttgttgttgaattga 9795310  T
Q  449 ggtgagaatcaagttttaattgatg 473  Q
    ||||  |||||||||| ||||||||    
T  9795309 ggtggaaatcaagtttcaattgatg 9795285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 14500227 - 14500403
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||     
T  14500227 ttcgtgctcttgttttggtgataagtttgagtatgttaatttaatgataaatgaattattggtgatgaaataacatgttcataatgtatgaaaatgggta 14500326  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14500327 gttgtgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 14500403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 16523063 - 16522887
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16523063 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 16522964  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  16522963 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgaggtgtgaatcaagtttcaattgatg 16522887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 9295939 - 9295763
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  9295939 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtaatgaaataacatgttcataatgtatgaaaatgggtt 9295840  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  9295839 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattggggtgtgaatcaagtttcaattgatg 9295763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 297 - 452
Target Start/End: Complemental strand, 8045189 - 8045034
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  8045189 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgagaatgggtt 8045090  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtg 452  Q
    ||| |||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  8045089 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgaggtg 8045034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 32460718 - 32460882
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||     
T  32460718 ttcgtgctcttgttttggttataattttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaaggggta 32460817  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||| ||||||             |||||||||||| ||||||||||||||||||||| ||||||||    
T  32460818 gttgtgaaattatggttaatt------------aatgttgttgttggattgaggtgagaatcaagtttcaattgatg 32460882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9795756 - 9795685
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9795756 caattgagtgggaacacacctaaacctaaaatttggagaggaattcattcattcatttcatttcacaaagtt 9795685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 32460561 - 32460657
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  32460561 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttc 32460657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 16523216 - 16523109
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--t 251  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| ||||  |    
T  16523216 gagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttcttggtt 16523118  T
Q  252 tgtatgaaa 260  Q
    |||||||||    
T  16523117 tgtatgaaa 16523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 8045346 - 8045235
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  8045346 ttaggagctaaagtgaagtctaagtttgaattaatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 8045248  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  8045247 ggtttgtatgaaa 8045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19021014 - 19020948
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  19021014 caattgagtgggaacacacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 19020948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 19020867 - 19020792
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||  | |||||||||||    
T  19020867 ttaggagctaaggtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttaccatcataatcatg 19020792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 444
Target Start/End: Original strand, 34177648 - 34177797
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| |||||||||| |||| ||||  ||||||||| ||||||  ||||||    
T  34177648 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaattacatgataattgaattgttgatgataaaattgcatgttcatgatgtatataaatgg 34177747  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaa 444  Q
    || |||  | ||||||| | ||||| | |||| |||| |||||||||||||    
T  34177748 gtagttgag-aattatgttcaattggtgaattatgacttgttgttgttgaa 34177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19697090 - 19697155
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  19697090 caattgagtgggaacacac-taaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 19697155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 19707675 - 19707740
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  19707675 caattgagtgggaacacac-taaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 19707740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 40885418 - 40885499
Alignment:
Q  151 taggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattt 232  Q
    ||||||||||||||||||| ||||||| ||| ||||| | |||||||||||||||| |  ||| ||||||||||||||||||    
T  40885418 taggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagaattcatcataatcatgattattt 40885499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 19559606 - 19559457
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||| ||||| |||| | |||||| ||||||| |||||||||  ||| ||| |||||||||| |||||||||  ||||||||| ||||||  ||||||    
T  19559606 aaattcctgctcatgttgtagtgatatgtttgagcatgttaatttgatgttaattgaattgttgatgatgaaattgcatgttcatgatgtatgtaaatgg 19559507  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    ||||||||| |||| ||||    |||||||||||||||||||||    
T  19559506 gtagtttgtgaattatgctcaatttatta----tgacatgttgttgttgaattg 19559457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 154 - 260
Target Start/End: Original strand, 14500074 - 14500181
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg-tt 252  Q
    |||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| |  ||| |||||||||| ||| ||||| ||||||||||| ||| ||    
T  14500074 gagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttaggcttcatcataatcataattgttttgcttgcaattttctttgttt 14500173  T
Q  253 gtatgaaa 260  Q
    ||||||||    
T  14500174 gtatgaaa 14500181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16523368 - 16523298
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||| | | || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16523368 caattgagttgtagcatacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaaagtt 16523298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 14952009 - 14951885
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  14952009 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 14951910  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  14951909 gtagtttgtaaattatgctcaattg 14951885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 32460430 - 32460483
Alignment:
Q  20 ctaaacctaaaacttggagaggaattcattcattc-atttcatttcacaaagtt 72  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  32460430 ctaaacctaaaacttggagagaaattcattcattctttttcatttcacaaagtt 32460483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14499920 - 14499992
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||| ||| || | | ||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  14499920 caattgagttggagcatatccaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 14499992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 15674967 - 15675062
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaatttt 245  Q
    |||||||||||||||||||| |||||    || ||||||| |||||||||||||||| || ||| |||||||||| || ||  | |||||||||||    
T  15674967 ttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttt 15675062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 26680591 - 26680436
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  26680591 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 26680494  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||||||| ||||||||||   |||||||| ||||||||||| |||||||||||||    
T  26680493 gatttgtatggaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 26680436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 418
Target Start/End: Original strand, 5682557 - 5682659
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||| ||||| |||   |||||||||| ||    
T  5682557 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaattgggtagtttgtaaattatgctcaa 5682656  T
Q  416 ttg 418  Q
    |||    
T  5682657 ttg 5682659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 305
Target Start/End: Original strand, 16327840 - 16327953
Alignment:
Q  192 taaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattgt 289  Q
    ||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | ||  ||| ||||||||||||||   |||||||| |||||||||    
T  16327840 taaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgt 16327937  T
Q  290 tgttaaattcgtgctc 305  Q
    || |||||||||||||    
T  16327938 tgctaaattcgtgctc 16327953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 393
Target Start/End: Original strand, 25119237 - 25119314
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  25119237 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 25119314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 55376452 - 55376525
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||| ||||||| |||||||  |||||| | | |||||||||||||||| || ||| |||||||||    
T  55376452 ttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaagggggttagtcttcatcataatca 55376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 49071934 - 49071850
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    |||||||||||| | || | |||||| |||||||||||||||||  ||| ||| |||||| ||| |||||||||  |||||||||    
T  49071934 aaattcgtgctcatattgtagtgatatgtttgagtatgttaatttgatgttaattgaattattgatgatgaaattgcatgttcat 49071850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 10104128 - 10104202
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||| ||||| |||||    || ||||||| |||||||||||||||| || ||| ||||||||||    
T  10104128 ttaggagctaaagtaaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 10104202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 13048194 - 13048248
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||   |||||||| ||||||||||| ||||||| |||||    
T  13048194 ttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcatgctc 13048248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 15135865 - 15135939
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  15135865 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 15272169 - 15272243
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  15272169 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 13246811 - 13246726
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  13246811 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 13246726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 22738650 - 22738577
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||||||||||| |||||   ||| | ||| | |||||||||||||||| || ||| |||||||||    
T  22738650 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 22738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 8045481 - 8045424
Alignment:
Q  15 cacacctaaacctaaaacttggagaggaattcatt-cattcattt-catttcacaaagtt 72  Q
    |||||||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||    
T  8045481 cacacctaaacctaa--cttggagagaaattcatttcattcattttcatttcacaaagtt 8045424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 15272320 - 15272444
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| |||| |||| |||| |||||||||  || |||||| |||||| |||||||    
T  15272320 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaacgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 15272419  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  15272420 gtagtttgtaaattatgctcaattg 15272444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 249; Significance: 1e-138; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 150 - 473
Target Start/End: Original strand, 49710 - 50034
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  49710 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttcctt 49809  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattc-gtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  49810 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaaatccgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 49909  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattga 448  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||| |||||||||| |||| ||||||||||| ||||||||||    
T  49910 gaattgttggtgatgaaataacatgttcatagtgtatgaaaatgggtagttgtgaaattatacttaattgatgaattatgacatgttgtggttgaattga 50009  T
Q  449 ggtgagaatcaagttttaattgatg 473  Q
    |||||||||||||||| ||||||||    
T  50010 ggtgagaatcaagtttcaattgatg 50034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 49562 - 49632
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  49562 caattgagtgggaacacacctaaacctaaa-cttagagagaaattcattcattcatttcatttcacaaagtt 49632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 150 - 473
Target Start/End: Original strand, 11477053 - 11477377
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  11477053 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttcctt 11477152  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaa-ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11477153 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 11477252  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattga 448  Q
    || |||| | | || ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||| ||||||||||| ||||||||||    
T  11477253 gatttgtggttaataaaataacatgttcataatgcatgaaaatgggttgttgtgaaattatgcttaattgatgaattatgacatgttgtggttgaattga 11477352  T
Q  449 ggtgagaatcaagttttaattgatg 473  Q
    |||||||||||||||| ||||||||    
T  11477353 ggtgagaatcaagtttcaattgatg 11477377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 191 - 473
Target Start/End: Original strand, 8275749 - 8276031
Alignment:
Q  191 ctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttgttgtatgaaatgggttgattggaatgaattgataattgtt 290  Q
    |||||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8275749 ctaaggtaagggggttagttattatcataatcatgattgttttgtttgcaattttccttgttttatgaaataggttgattggaatgaattgataattgtt 8275848  T
Q  291 gttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaa 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8275849 gttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaacgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaa 8275948  T
Q  391 tgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8275949 tgggttgttatgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 8276031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 191 - 473
Target Start/End: Original strand, 8268649 - 8268931
Alignment:
Q  191 ctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttgttgtatgaaatgggttgattggaatgaattgataattgtt 290  Q
    |||||||||||||||| ||| |  |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8268649 ctaaggtaagggggttagttattatcataatcatgattgttttgtttgcaattttccttgttttatgaaataggttgattggaatgaattgataattgtt 8268748  T
Q  291 gttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaa 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8268749 gttaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaacgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaa 8268848  T
Q  391 tgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    | |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8268849 ttggttgttatgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 8268931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 220 - 473
Target Start/End: Original strand, 9303032 - 9303286
Alignment:
Q  220 atcatgattattttgtttgcaattttccttgttgtatgaaatgggttgattggaatgaattgataattgttgttaaa-ttcgtgctcttgttttggtgat 318  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9303032 atcatgattgttttgtttgcaattttctttgttgtatgaaatggattgattggaatgaattgatatttgttgttaaaattcgtgctcttgttttggtgat 9303131  T
Q  319 aagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  9303132 aagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggttgttgtgaaattatgcttaattg 9303231  T
Q  419 attaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    || | || |||||||||| |||||||||| |||| ||||||||||| ||||||||    
T  9303232 atgacttatgacatgttgctgttgaattggggtgtgaatcaagtttcaattgatg 9303286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 14285206 - 14285030
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||     
T  14285206 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcatagtgtatgaaaatgggta 14285107  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| ||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  14285106 gttgtgaaaatatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagtttcaattgatg 14285030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 16933984 - 16934160
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16933984 ttcgtgctcttgttttgatgataagattgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 16934083  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  16934084 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattaaggtgagaatcaagtttcaattgatg 16934160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 19946943 - 19946767
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||     
T  19946943 ttcgtgctcttgttttggtgataaatttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgagta 19946844  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19946843 gttgtgaaattatgcttaattgatgatttatgacatgttgttgttgaattgaggtgtgaatcaagtttcaattgatg 19946767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 11986038 - 11986194
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattt-tcct 248  Q
    |||||||||||| ||||||| ||||||| ||| ||||| | |||||||||||||||| || ||| ||||||||||| | | ||   |||||| || ||||    
T  11986038 ttaggagctaaattgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatgttcaatta--ttgcaacttctcct 11986135  T
Q  249 t-gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11986136 ttgttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctct 11986194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9302851 - 9302922
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9302851 caattgagtgggaacacacctaaacctaaaacttggagtggaattcattcattcatttcatttcacaaagtt 9302922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 18970168 - 18970016
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||| ||||||||||||  ||| ||| |||||||||| |||||||||  ||||||||| ||||||  ||||||    
T  18970168 aaattcgtgctcatgttgtagtgatatgtttaagtatgttaatttgatgttaattgaattgttgatgatgaaatttcatgttcatgatgtatgtaaatgg 18970069  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaatt 446  Q
    || |||    ||||||||| ||||||| |||| ||||||||||||||||||||    
T  18970068 gtagtttgtgaattatgctcaattgatgaattatgacatgttgttgttgaatt 18970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 444
Target Start/End: Complemental strand, 48421824 - 48421674
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||| ||||| |||| | |||||| |||||||||||||||||  ||||||| ||||||||||||||||||||  ||||||||| ||||||  ||||||    
T  48421824 aaattcatgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattgttggtgatgaaattgcatgttcatgatgtatataaatgg 48421725  T
Q  394 gttgttatga-aattatgcttaattgattaattgtgacatgttgttgttgaa 444  Q
    || ||| ||| ||||||| | ||||| | |||| ||||||||||||||||||    
T  48421724 gtagtt-tgagaattatgttcaattggtgaattatgacatgttgttgttgaa 48421674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 16933827 - 16933938
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||  |||||||||| |||  || |||||||||||| |||    
T  16933827 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtctttatcataatcataatt-gttagtttgcaatttttctt 16933925  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  16933926 ggtttgtatgaaa 16933938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 12901965 - 12902040
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||||||    
T  12901965 ttaggagttaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttatcatcataatcatg 12902040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 436
Target Start/End: Complemental strand, 15550845 - 15550703
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| |||||| ||| |||||||||  ||||||||| ||||||  ||||||    
T  15550845 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtatataaatgg 15550746  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttg 436  Q
    || |||    |||| |||| ||||||| |||||||||||||||    
T  15550745 gtagtttgtgaattgtgctcaattgatgaattgtgacatgttg 15550703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 14285363 - 14285267
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||||||||||  ||||||| ||| ||||| | |||||||||||||||| || ||| |||||||||| ||| |||||||||||||||||    
T  14285363 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcataattgttttgtttgcaattttc 14285267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 19947100 - 19947004
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    ||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||||| || ||| |||||||||| ||| |||  ||||||||||||    
T  19947100 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgttttgcaattttc 19947004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11476905 - 11476975
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  11476905 caattgagtgggaacacacttaaacctaaa-cttggagagaaattcattcattcatttcatttcgcaaagtt 11476975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 15938352 - 15938427
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| || | |||||||||    
T  15938352 ttaggagctaaagtgaagctcaagtttgaattgatcatagcctaaggtaagggggttagttatcattataatcatg 15938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15936360 - 15936432
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattca--tttcatttcacaaagtt 72  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  15936360 caatagagtgggaacacacctaaacctaaa-cttggagaggaattcattcattcacttttcatttcacaaagtt 15936432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12901820 - 12901872
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12901820 caattgagtgggaacacacctaaacctaaaacttggagaggaatttattcatt 12901872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19947249 - 19947179
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||| ||| || ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  19947249 caattgagttggagcatacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaaagtt 19947179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15938202 - 15938272
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattca--tttcatttcacaaag 70  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||    
T  15938202 caatagagtgggaacacacctaaacct-aaacttggaggggaattcattcattcacttttcatttcacaaag 15938272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 447
Target Start/End: Complemental strand, 38168134 - 38168008
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgat 420  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||||| |    
T  38168134 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattggt 38168035  T
Q  421 taattgtgacatgttgttgttgaattg 447  Q
     |||| ||  ||||||||| |||||||    
T  38168034 gaattatgctatgttgttgatgaattg 38168008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 17912356 - 17912510
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| |||||||  || | | ||| ||| | | |||||||||||||||| || ||  ||||||||||| | ||||   ||||||||||| ||    
T  17912356 ttaggagctaaattgaagcctgaggtgggattaatctttatctaaggtaagggggttagtctttatcataatcatgttcattta--ttgcaattttcatt 17912453  T
Q  250 gtt-gtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
     || ||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  17912454 atttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 17912510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 12539069 - 12539153
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    ||||||||||||||||||| |||||| | |||||||||| ||||   |||||| |||||||||| |||||||||  |||||||||    
T  12539069 aaattcgtgctcttgttttagtgatatggttgagtatgtgaatttgttgataattgaattgttgatgatgaaattgcatgttcat 12539153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 30153189 - 30153065
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  30153189 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 30153090  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  30153089 gtagtttgtaaattatgctcaattg 30153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 45581878 - 45581754
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||||| |||||||||||| |||||||||  || |||||| |||||| |||||||    
T  45581878 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgattaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 45581779  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  45581778 gtagtttgtaaattatgctcaattg 45581754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 54685309 - 54685433
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  54685309 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 54685408  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  54685409 gtagttggtaaattatgctcaattg 54685433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 13954762 - 13954917
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||   |||||||||| | ||| |  |||||||||| | |    
T  13954762 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttaccataatcatgttcattct--ttgcaatttttcat 13954859  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||    
T  13954860 gaattgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctc 13954917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 15936510 - 15936585
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    |||||||| |||||||||| |||||||||||||||| || ||||||||| ||||||| ||| || | |||||||||    
T  15936510 ttaggagcaaaagtgaagctcaagtttgaattgatcgtagcctaaggtatgggggttagttatcattataatcatg 15936585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 13975695 - 13975749
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||    
T  13975695 ttgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctc 13975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 45861095 - 45861041
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||  ||||||||| ||||||||||| |||||||||||||    
T  45861095 ttgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctc 45861041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 14285494 - 14285441
Alignment:
Q  20 ctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  14285494 ctaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 14285441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 38375696 - 38375797
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||||||||||||||| || ||||| |||||||||  | ||||  ||||||| ||||||||||  ||||||||  |||||||||||| | | |||||||    
T  38375696 aaattcgtgctcttgttatgatgatatgtttgagtacatgaatttgatgataattgaattgttgtagatgaaattgcatgttcataatttgtgaaaatgg 38375795  T
Q  394 gt 395  Q
    ||    
T  38375796 gt 38375797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 54038159 - 54038256
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  54038159 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctaaattg 54038256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 2449110 - 2449265
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  2449110 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 2449207  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  2449208 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 2449265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 393
Target Start/End: Complemental strand, 7854229 - 7854130
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  7854229 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 7854130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 418
Target Start/End: Complemental strand, 2844404 - 2844314
Alignment:
Q  328 tatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  2844404 tatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 2844314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 3992775 - 3992673
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||  ||||||||| |||   |||||||||| ||    
T  3992775 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaggttcatgatgtaggaaaatgggtagtttgtaaattatgctcaa 3992676  T
Q  416 ttg 418  Q
    |||    
T  3992675 ttg 3992673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 16261851 - 16261777
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| ||||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  16261851 ttaggagctaaagtgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 16261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 33342106 - 33342004
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| | |||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||    
T  33342106 gatatgtttgaatatgttaatttgatgtttaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagttggtaaattatgctcaa 33342007  T
Q  416 ttg 418  Q
    |||    
T  33342006 ttg 33342004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 10913133 - 10913032
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||||||||||||||| || ||||| |||||||||  | ||||   |||||| |||||||||| |||||||||  ||||| |||||| | | |||||||    
T  10913133 aaattcgtgctcttgttatgatgatatgtttgagtacatgaatttggtgataattgaattgttgttgatgaaattgcatgtccataatatgtgaaaatgg 10913034  T
Q  394 gt 395  Q
    ||    
T  10913033 gt 10913032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 51960990 - 51961063
Alignment:
Q  151 taggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||| |||||||||| | ||||||| ||| ||||| | |||||||||||||||| || ||| ||||||||||    
T  51960990 taggaggtaaagtgaagtctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 55513117 - 55513016
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || ||| || |||||| |||||||    
T  55513117 aaattcgtgcttatgttgtagagatatgtttgaatatgttaattcgatgttaaatgaattgttgatgatgaaattgcaagttaatgatgtatgaaaatgg 55513018  T
Q  394 gt 395  Q
    ||    
T  55513017 gt 55513016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 11402837 - 11402753
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    |||||||||||| | || | |||||| |||||||||| | ||||  ||||||| |||||||||| |||||||||  |||||||||    
T  11402837 aaattcgtgctcatattatagtgatatgtttgagtatatgaatttgatgataattgaattgttgttgatgaaatttcatgttcat 11402753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 53771288 - 53771164
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||| |||||||    
T  53771288 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 53771189  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  53771188 gtagtttgtaaattatgctcaattg 53771164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 53771439 - 53771365
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  53771439 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 2050189 - 2050104
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  2050189 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 2050104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 9302999 - 9303036
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcat 187  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  9302999 ttaggagttaaagtgaagctcaagtttgaattgatcat 9303036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 269
Target Start/End: Complemental strand, 54651838 - 54651720
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||| || ||||||  |||||||  || ||||| | |||||||||||||||| || ||| ||||||||||| | | ||  ||||||||||  | |    
T  54651838 ttaggagcttaattgaagcaaaagtttgggttaatcatcatctaaggtaagggggtttgtcttcatcataatcatgttcaatt--tttgcaatttctcat 54651741  T
Q  250 gttgtatg-aaatgggttgat 269  Q
    |||||||| ||||||||||||    
T  54651740 gttgtatgaaaatgggttgat 54651720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 418
Target Start/End: Complemental strand, 16261700 - 16261576
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||  |||||||    
T  16261700 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtacgaaaatgg 16261601  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  16261600 gtagtttgtaaattatgctcaattg 16261576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 17393681 - 17393597
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    ||||||||||||| ||| | |||||| ||||| |||||||||||   |||||| |||||| |||  ||||||||  |||||||||    
T  17393681 aaattcgtgctctagttgtagtgatatgtttgggtatgttaatttgttgataattgaattattgacgatgaaattgcatgttcat 17393597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 17956026 - 17956090
Alignment:
Q  328 tatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatg 392  Q
    ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||    
T  17956026 tatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatg 17956090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 412
Target Start/End: Complemental strand, 23492598 - 23492502
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgct 412  Q
    |||| |||||| | ||||||||  ||| |||||||||||||| | |||||||  || |||||| |||||| ||||||||| |||   ||||||||||    
T  23492598 gatatgtttgaatgtgttaatttgatgttaaatgaattgttgattatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgct 23492502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 150 - 417
Target Start/End: Original strand, 9370 - 9638
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  9370 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttcctt 9469  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgtt-aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaat 348  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  9470 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctcttgttttggtgataagtttgagtatgttaattgattgctaaat 9569  T
Q  349 gaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaatt 417  Q
    ||||||||| |||||||||  || ||| || |||||| ||||||||| |||   |||||||||| ||||    
T  9570 gaattgttgatgatgaaattgcaagtttatgatgtatgaaaatgggtagtttgtaaattatgctcaatt 9638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9219 - 9291
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttca-tttcacaaagtt 72  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  9219 caattgagtgggaatacacctaaacctaaaacttggagaggaattcattcattcattccattttcacaaagtt 9291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 180; Significance: 5e-97; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 150 - 473
Target Start/End: Complemental strand, 12137 - 11814
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattt-tcct 248  Q
    |||||||||||| ||||||| ||||||| ||| ||||| | ||||| |||||||||| || ||| ||||||||||| | | ||   |||||| || ||||    
T  12137 ttaggagctaaattgaagccaaagtttggattaatcattatctaagataagggggttagtcttcatcataatcatgttcaatta--ttgcaacttctcct 12040  T
Q  249 t-gttgtatgaaatgggttgattggaatgaattgataattgttgttaaatt-cgtgctcttgttttggtgataagtttgagtatgttaattgaatgataa 346  Q
    | ||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  12039 ttgttgtatgaaacgggttgattgcaatgaattgataattgttgttaaatttcgtgctattgttttggtgataagtttgagtatgttaattgaatgataa 11940  T
Q  347 atgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaatt 446  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||||||||||||| |||  ||||||||| ||||||||||    
T  11939 atgaattgttggtgatgaaataacatgttcataatgtttgaaaatgggtagttgtgaaattatgcttaattgatgaatcatgacatgtt-ttgttgaatt 11841  T
Q  447 gaggtgagaatcaagttttaattgatg 473  Q
    |||||||||||||||||| ||||||||    
T  11840 gaggtgagaatcaagtttcaattgatg 11814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 8051 - 8208
Alignment:
Q  151 taggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaa-gggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    ||||||||||| ||||||| ||||||| ||| ||||| | ||||||||| ||||||| || ||| ||||||||||| | ||||   |||||||||  |      
T  8051 taggagctaaaatgaagcctaagtttggattaatcattatctaaggtaaggggggttagtcttcatcataatcatgttcattt--attgcaatttctcat 8148  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||| ||||||||| | |||| ||| ||||||||||| ||||||||||||||    
T  8149 ttgttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctct 8208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 26298 - 26383
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||| | | ||| ||| | | |||||||||||||||| || ||  ||||||||||||| |||||||    
T  26298 ttaggagctaaattgaagcctaagatgggattaatcttcatctaaggtaagggggttagtctttatcataatcatgatcattttgt 26383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 150 - 391
Target Start/End: Complemental strand, 95372 - 95129
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||| | ||||| ||| ||||| |||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  95372 ttaggagctaaagtgaagcctaggtttggattaatcattacctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttcctt 95273  T
Q  250 gttgtatgaaatggg-ttgattggaatgaattgataattgttgtt-aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaa 347  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  95272 gttgtatgaaatgggtttgattgaaatgagttgataattgttgttaaaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaa 95173  T
Q  348 tgaattgttggtgatgaaataacatgttcataatgtattaaaat 391  Q
    |||||||||| |||||||||  || |||||| |||||| |||||    
T  95172 tgaattgttgatgatgaaattgcaagttcatgatgtatgaaaat 95129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 95523 - 95472
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattc 54  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  95523 caattgagtgggaacacacctaaacct--aacttggagagaaattcattcattc 95472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 161; Significance: 1e-85; HSPs: 3)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 5466 - 5290
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5466 ttcgtgctcttgttttggtgataagtttgagtatgttaattgattgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 5367  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5366 gttatgaaattatgcttaattgatgaattgtgacatgttgttgttgaattgaggtgagaatcaagatttaattgatg 5290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 5623 - 5527
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||    
T  5623 ttaggagctaaaatgaagcccaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcatgattgttttgtttgcaattttc 5527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 5745 - 5691
Alignment:
Q  18 acctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5745 acctagacctaaaacttggagagaaattcattcattcatttcatttcacaaagtt 5691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 153; Significance: 7e-81; HSPs: 3)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 5591 - 5767
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5591 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 5690  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  5691 gttttgaaattatgcttaattaatgaattatgacatgttgttgttgaattgaggtgagaatcaagtttcaattgatg 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 5434 - 5530
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||||||||||| ||| ||| ||| ||||| |||||||||||||||||| || ||| |||||||||| ||| |||||||||||||||||    
T  5434 ttaggagctaaagtgaagcctaagattggattaatcattacctaaggtaagggggttagtcttcatcataatcataattgttttgtttgcaattttc 5530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 5306 - 5357
Alignment:
Q  22 aaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  5306 aaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 5357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 153; Significance: 7e-81; HSPs: 3)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 17943 - 17767
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  17943 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggta 17844  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  17843 gttgtgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaatcaagtttcaattgatg 17767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 18100 - 17989
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||||| ||||||| ||| ||||| | |||||||||||||||| || ||| |||||||||| ||||||||||||||||||||| ||    
T  18100 ttaggagttaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcataattattttgtttgcaattttcttt 18001  T
Q  250 g-ttgtatgaaa 260  Q
    | ||||||||||    
T  18000 gtttgtatgaaa 17989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 18231 - 18178
Alignment:
Q  20 ctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  18231 ctaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 18178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 24826729 - 24826905
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24826729 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 24826828  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24826829 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgaggtgtgaatcaagtttcaattgatg 24826905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 15633458 - 15633282
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||     
T  15633458 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtttgaaaatgggta 15633359  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  15633358 gttgtgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgagaaacaagtttcaattgatg 15633282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 17204576 - 17204400
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17204576 ttcgtgctcttgttttggtgataagattgagtatgttaattgcatcataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 17204477  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  17204476 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgaggtgtgaatcaagtttcaattgatg 17204400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 28031249 - 28031425
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||     
T  28031249 ttcgtgctcttgttttggtgataagttttagtatgttaattgattgataaatgaattgttggtgatgaaataacatgttcataatgtgtgaaaatgggta 28031348  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  28031349 gttgtgaaattatgcttaattgatgaattatgatatgttgttgttgaattgaggtgagaatcaagtttcaattgatg 28031425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 297 - 464
Target Start/End: Complemental strand, 33128289 - 33128122
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33128289 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 33128190  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttt 464  Q
    ||| |||||||||||||||||||| | || ||||||||||||||||||||| | ||||||||| ||||    
T  33128189 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgtgatgagaatcatgttt 33128122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 25213295 - 25213117
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  |||||||||||| || ||||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  25213295 aaattcgtgcttatgttgtagagatatgtttggatatgttaattga-tgttaaatgaatggttgatgatgaaataatatgttcataatgtatgaaaatgg 25213197  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  25213196 gttgttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattggggtgtgaatcaagtttcaattgatg 25213117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23777771 - 23777842
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23777771 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 23777842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 150 - 310
Target Start/End: Original strand, 7507715 - 7507876
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| | ||||   |||||||||  |      
T  7507715 ttaggagttaaagtgaaactcaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcatgttcattt--attgcaatttctcat 7507812  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctcttgtt 310  Q
    |||||||||||| ||||||||| | ||||||||  |||||| ||| ||||||||||||||||||    
T  7507813 ttgttgtatgaatatgggttgaattgaatgaatgaataattattgctaaattcgtgctcttgtt 7507876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 28031092 - 28031188
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    ||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||    
T  28031092 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcatcataatcatgattgttttgtttgcaattttc 28031188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 33128446 - 33128335
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  33128446 ttaggagctaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 33128348  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  33128347 ggtttgtatgaaa 33128335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 7321764 - 7321612
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| |||||| ||  |||||||||  |||||| || ||||||  ||||||    
T  7321764 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattttttatgatgaaatttcatgtttatgatgtatataaatgg 7321665  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaatt 446  Q
    || |||    |||| |||| ||||||| |||||||||||||||||||||||||    
T  7321664 gtagtttgtgaattgtgctcaattgatgaattgtgacatgttgttgttgaatt 7321612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17204883 - 17204812
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||    
T  17204883 caattgagtgggaacacacctaaacttaaaacttggagagaaattcattcattcatttcattttataaagtt 17204812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 23777920 - 23777995
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||| || |||||||||||    
T  23777920 ttaggagctaaagtgaagctcaaatttgaattgatcataacctaaggtaaaggggttagttatcatcataatcatg 23777995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 25265261 - 25265418
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    |||||||||||||||||||| | ||||| ||| ||||| | |||| ||||||||||| || ||| ||||||||||| | ||||   |||||||||  |      
T  25265261 ttaggagctaaagtgaagcctaggtttggattaatcattatctaatgtaagggggttagtcttcatcataatcatgttcattt--attgcaatttctcat 25265358  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||| ||||||||| | |||| ||| ||||||||||| ||||||||||||||    
T  25265359 ttgttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctct 25265418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 17204733 - 17204622
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||| |||||||||| | ||||||| ||| |||||||||||| ||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  17204733 ttaggagttaaagtgaagtctaagtttggattaatcataacctaaagtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 17204635  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  17204634 ggtttgtatgaaa 17204622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 7507567 - 7507637
Alignment:
Q  3 attgagtgggaacacacctaaacctaaaacttggagaggaattcattcattca--tttcatttcacaaagtt 72  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||||||||||||  |||||||||||||||||    
T  7507567 attgagtgggaacacacctaaatctaaa-cttggagagaaattcattcattcatttttcatttcacaaagtt 7507637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 22274947 - 22274845
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||||||||   |||||||||| ||    
T  22274947 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggttgtttgtaaattatgctcaa 22274848  T
Q  416 ttg 418  Q
    |||    
T  22274847 ttg 22274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 22284180 - 22284078
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| |||||||||| |||| |||||||||||||| |||||||||  || |||||| |||||| ||||||  | ||||  |||||||||| ||    
T  22284180 gatatgtttgaatatgttaatttaatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgaatagttagtaaattatgctcaa 22284081  T
Q  416 ttg 418  Q
    |||    
T  22284080 ttg 22284078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 305
Target Start/End: Original strand, 19689315 - 19689428
Alignment:
Q  192 taaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattgt 289  Q
    ||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | ||  ||||||||||||||||||   |||||||| |||||||||    
T  19689315 taaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgt 19689412  T
Q  290 tgttaaattcgtgctc 305  Q
    || |||||||||||||    
T  19689413 tgctaaattcgtgctc 19689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 22284497 - 22284444
Alignment:
Q  20 ctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  22284497 ctaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 22284444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 395
Target Start/End: Original strand, 9652926 - 9653005
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggt 395  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||||    
T  9652926 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggt 9653005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 14906312 - 14906467
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  14906312 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 14906409  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  14906410 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 14906467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 23820462 - 23820307
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  23820462 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 23820365  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  23820364 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 23820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 17396626 - 17396680
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  17396626 ttgtatgaaatgggttgacatgaatgaatggataattgttgctaaattcgtgctc 17396680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 21142276 - 21142203
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||||||||||| |||||   ||| | ||| | |||||||||||||||| |||||| |||||||||    
T  21142276 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 21142203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 15633762 - 15633690
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||  ||| || ||| |||| |||||||||||||| |||||||||||| | |||||||||||||||||    
T  15633762 caattgagatggagcataccaaaacttaaaacttggagagaaattcattcattccttttcatttcacaaagtt 15633690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22256408 - 22256336
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||  |||||| | |||| ||||||||||||| || |||||||||||| | |||||||||||||||||    
T  22256408 caattgagatggaacatatctaagcctaaaacttggacagaaattcattcattccttttcatttcacaaagtt 22256336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22275283 - 22275211
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||| ||| || | |||||||||||||||| |||| |||||||| ||| | |||||||||||||||||    
T  22275283 caattgagttggagcatatctaaacctaaaacttgaagagaaattcatttattccttttcatttcacaaagtt 22275211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 28030971 - 28031015
Alignment:
Q  29 aaacttggagaggaattcattcattcatttca-tttcacaaagtt 72  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||    
T  28030971 aaacttggagagaaattcattcattcatttcattttcacaaagtt 28031015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 24341267 - 24341362
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaatttt 245  Q
    |||||||||||| ||||||| |||||    || ||||||| |||||||||||||||| || ||| |||||||||| || ||  | |||||||||||    
T  24341267 ttaggagctaaaatgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttt 24341362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 463117 - 463032
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  463117 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 463032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 5888505 - 5888578
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||||||||||  |||||   ||| | ||| | |||||||||||||||| |||||| |||||||||    
T  5888505 ttaggagctaaagtgaagcttaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 5888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 21274057 - 21274158
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||| |||||||    
T  21274057 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 21274156  T
Q  394 gt 395  Q
    ||    
T  21274157 gt 21274158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 378
Target Start/End: Complemental strand, 20279658 - 20279574
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    |||||||||||| |||| | | |||| ||||| |||| | ||||  ||||||| |||||||||| |||||||||  |||||||||    
T  20279658 aaattcgtgctcatgttatagagatatgtttgggtatatgaatttgatgataattgaattgttgttgatgaaattgcatgttcat 20279574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 1e-73; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 297 - 473
Target Start/End: Complemental strand, 371334 - 371158
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  371334 ttcgtgctcttgttttggtgataagattgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 371235  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || |||||||||||||||||||| |||||||||||||||||  |||||||    
T  371234 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattaaggtgagaatcaagtttcgattgatg 371158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 371491 - 371380
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| |||    
T  371491 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttctt 371393  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  371392 ggtttgtatgaaa 371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 443
Target Start/End: Original strand, 39291517 - 39291666
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| |||||||||| |||||||||  |||||| || ||||||  ||||||    
T  39291517 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgttgatgatgtatataaatgg 39291616  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttga 443  Q
    || |||    ||||||||| ||||| | ||||||||||| ||||||||||    
T  39291617 gtagtttgtgaattatgctcaattggtgaattgtgacatattgttgttga 39291666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47480750 - 47480820
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  47480750 caattgagtgggaacacacctaaacctaaa-cttggagagaaattcattcattcttttcatttcacaaagtt 47480820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 13352199 - 13352046
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||| ||||||||||||  ||||||  ||| |||||| || ||||||  ||||||||| ||||||  ||||||    
T  13352199 aaattcgtgctcatgttgtagtgatatgtttcagtatgttaatttgatgatatttgatttgttgatggtgaaattgcatgttcatgatgtatataaatgg 13352100  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || ||  |  ||||||||| ||||||| |||| |||||||||||||||||||||    
T  13352099 gtagtattttaattatgctcaattgatgaattatgacatgttgttgttgaattg 13352046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 18253718 - 18253793
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| || | |||||||||    
T  18253718 ttaggagctaaagtgaagctcaaatttgaattgatcataacctaaggtaagggggttagttatcattataatcatg 18253793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 13321408 - 13321251
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    |||||||||||||||||||| | ||||| ||| ||||| | |||||||||||||||| || ||| ||||||||||| | ||||   |||||||||  |      
T  13321408 ttaggagctaaagtgaagcctaggtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatgttcattt--attgcaatttctcat 13321311  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||| ||||||||| | |||| | | ||||||||||| ||||||||||||||    
T  13321310 ttgttgtatgaatatgggttgaattgaataagtggataattgttgctaaattcgtgctct 13321251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 47480902 - 47481059
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    ||||||| |||||||||||| ||||||| ||| ||||| | |||||||||||||||| || ||| ||||||||||  | ||||   |||||||||  |      
T  47480902 ttaggaggtaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatattcattt--attgcaatttctcat 47480999  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||| ||||||||| | |||| ||| ||||||||||| ||||||||||||||    
T  47481000 ttgttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctct 47481059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 15862300 - 15862225
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||| |||  |||||| ||||||||||||||||||||||||||||||||||||| ||| |  |||||||||||    
T  15862300 ttaggagttaagttgaagctcaagtttgaattgatcataacctaaggtaagggggttagttattatcataatcatg 15862225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 7293407 - 7293252
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  7293407 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 7293310  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  7293309 gatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 7293252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 365
Target Start/End: Original strand, 17984756 - 17984827
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaa 365  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||   |||||| |||||||||| |||||||    
T  17984756 aaattcgtgctcttgttttagtgatatgtttgggtatgttaatttgttgataattgaattgttgatgatgaa 17984827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 30262001 - 30262156
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  30262001 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 30262098  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  30262099 gatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 30262156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 126640 - 126538
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||    
T  126640 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 126541  T
Q  416 ttg 418  Q
    |||    
T  126540 ttg 126538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 25124524 - 25124450
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||||  ||| ||||| | |||||||||||||||| || ||| ||||||||||    
T  25124524 ttaggagctaaagtgaagcctaagtttagattaatcattatctaaggtaagggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 111277 - 111401
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||| |||||||    
T  111277 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 111376  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  111377 gtagtttgtaaattatgctcaattg 111401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 8563347 - 8563431
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcat 378  Q
    ||||| ||||||||||| || ||||| |||||||||| | ||||  ||||||| |||||||||| |||||||||  |||||||||    
T  8563347 aaatttgtgctcttgttatgatgatatgtttgagtatatgaatttgatgataattgaattgttgttgatgaaattgcatgttcat 8563431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 11516618 - 11516463
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  11516618 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 11516521  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  11516520 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 11516463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 15441436 - 15441591
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  15441436 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 15441533  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  15441534 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 15441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 305
Target Start/End: Original strand, 14113902 - 14114016
Alignment:
Q  191 ctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--ttgtatgaaatgggttgattggaatgaattgataattg 288  Q
    |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | ||  ||| ||||||||||||||   |||||||| ||||||||    
T  14113902 ctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattg 14113999  T
Q  289 ttgttaaattcgtgctc 305  Q
    ||| |||||||||||||    
T  14114000 ttgctaaattcgtgctc 14114016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 14423612 - 14423666
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  14423612 ttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 14423666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 15977849 - 15978002
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||| |||||| ||| | |||||| |||||||||||||||||   |||||| |||||| ||| |||||||||  |||||||||  |||||  | ||||    
T  15977849 aaattcatgctctagttgtagtgatatgtttgagtatgttaatttgttgataattgaattattgatgatgaaattgcatgttcatggtgtatatatatgg 15977948  T
Q  394 gttgtt-atgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
     |  || ||| |||||| || || |||| |||| |||||||||||||||||||||    
T  15977949 atacttgatg-aattatactcaaatgatgaattatgacatgttgttgttgaattg 15978002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 2029141 - 2029044
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||  ||||||||| |||   |||||||||| |||||    
T  2029141 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtacgaaaatgggtagtttgtaaattatgctcaattg 2029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 36053045 - 36052960
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  36053045 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 36052960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 48622541 - 48622614
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||||||||||| |||||   ||| | ||| | |||||||||||||||| |||||| |||||||||    
T  48622541 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 48622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 10000484 - 10000555
Alignment:
Q  401 tgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||||||| |||||||||||| | |||||| | ||||| |||||||||||||||||| ||||||| ||| ||||    
T  10000484 tgaaattttgcttaattgatgatttgtgataagttgt-gttgaattgaggtgagaaacaagtttcaatggatg 10000555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18253571 - 18253622
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatt 53  Q
    ||||||| |||||||| |||||||||| |||||||||||| ||||||||||||    
T  18253571 caattgaatgggaacatacctaaacct-aaacttggagagaaattcattcatt 18253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 2029318 - 2029244
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||| ||||||| ||||| ||||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  2029318 ttaggagctaaattgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 25292311 - 25292365
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||   |||||||| ||||||||||| |||||| ||||||    
T  25292311 ttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaatttgtgctc 25292365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 42056146 - 42056220
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  42056146 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 10000245 - 10000318
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||||||||||| |||||   ||| | ||| | |||||||||||||||| || ||| |||||||||    
T  10000245 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 10000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 13036896 - 13036981
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || |||  ||||||||| || |||||||    
T  13036896 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcaccataatcatcatcattttgt 13036981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 16212145 - 16212060
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  16212145 ttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatcatcattttgt 16212060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 42056297 - 42056398
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||| |||||||    
T  42056297 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 42056396  T
Q  394 gt 395  Q
    ||    
T  42056397 gt 42056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 2190194 - 2190318
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||| |||||||    
T  2190194 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 2190293  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
     | |||   |||||||||| |||||    
T  2190294 atagtttgtaaattatgctcaattg 2190318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 6226 - 6402
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6226 ttcgtgctcttgttttggtgataagattgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 6325  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||| ||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  6326 gttgtgaaattaagcttaattgatgacttatgacatgttgttgttgaattggggtgtgaatcaagtttcaattgatg 6402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5918 - 5989
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5918 caattgagtgggaacacacctaaacctaaaacttagagaggaattcattcattcatttcatttcacaaagtt 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 6068 - 6179
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||   ||||||||| |||  ||||||||||||||| |||    
T  6068 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttaaacataatcataatt-gtttgtttgcaatttttctt 6166  T
Q  250 g--ttgtatgaaa 260  Q
    |  ||||||||||    
T  6167 ggtttgtatgaaa 6179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 34423 - 34599
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||     
T  34423 ttcgtgctcttgttttaatgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtgtgaaaatgggta 34522  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  34523 gttgtgaaattatgcttaattgatgaattatgacatgttgttgttgaattgaggtgaaaatcaagtttcaattgatg 34599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 34266 - 34362
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttc 246  Q
    |||||||||||| ||||||| ||||||| ||| ||||| | |||||||||||||||| || ||| |||||||||| ||| |||||||||||||||||    
T  34266 ttaggagctaaaatgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcataattgttttgtttgcaattttc 34362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 34135 - 34188
Alignment:
Q  20 ctaaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  34135 ctaaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 34188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 137; Significance: 2e-71; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 61237 - 61412
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  61237 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 61336  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    ||| |||||||||||||||||||| | || ||||||||||||||||||||| | ||||||||| | |||||||||||    
T  61337 gttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgtgatgagaatcatg-tttaattgatg 61412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 260
Target Start/End: Original strand, 61084 - 61191
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--t 251  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| ||||  |    
T  61084 gagctaaagttaagctcaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttcttggtt 61182  T
Q  252 tgtatgaaa 260  Q
    |||||||||    
T  61183 tgtatgaaa 61191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 60929 - 61002
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattca--ttcatttcatttcacaaagtt 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  60929 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcatttttttttcatttcacaaagtt 61002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 48977 - 48892
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||| ||||| ||||||  ||||| ||| |||||||||||||||||| || ||  |||||||||| || |||||||    
T  48977 ttaggagctaaagtaaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatcatcatcattttgt 48892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 297 - 473
Target Start/End: Original strand, 17324 - 17499
Alignment:
Q  297 ttcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggtt 396  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17324 ttcgtactcttgttttggtgataagtatgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtatgaaaatgggtt 17423  T
Q  397 gttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    | | |||||||||||||||||||| | || ||||||||||||||||||||| | ||||||||| | |||||||||||    
T  17424 gctgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattgtgatgagaatcatg-tttaattgatg 17499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 17208 - 17278
Alignment:
Q  191 ctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttccttg--ttgtatgaaa 260  Q
    |||||||||||||||| || ||| |||||||||| |||  ||||||||||||||| ||||  ||||||||||    
T  17208 ctaaggtaagggggttagtcttcatcataatcataatt-gtttgtttgcaatttttcttggtttgtatgaaa 17278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 48578 - 48423
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| || |||||||||||||||| | ||||||||||||||||||||    
T  48578 ttaggagctaaagtgaagcccaaatttgaattaatcataacctaatgtaagggggttagtcttcttcataatcatgaatgttttgtttgcaattttcctt 48479  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  48478 gttgtatgaaatgggttggttggaatgaattgataattgttgctaaattcgtgctc 48423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48727 - 48656
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttca-tttcacaaagtt 72  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  48727 caattgagtgggaacacaccaaaacctaaa-cttggagagaaattcattcattcatttcattttcacaaagtt 48656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 150 - 320
Target Start/End: Original strand, 13225 - 13394
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| | | |||  ||||| |||  | |    
T  13225 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagttatcatcataatcatgttcaattt--ttgcattttctcat 13322  T
Q  250 gttgtatgaaatgggttgattggaatgaattgataattgttgtt-aaattcgtgctcttgttttggtgataa 320  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13323 gttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctcttgttttggtgataa 13394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13077 - 13148
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13077 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 13148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 13398 - 13470
Alignment:
Q  401 tgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||||||||||  |||||||||| ||||||||    
T  13398 tgaaattatgtttaattgatgaattatgacatgttgttgttgaattgaggtggaaatcaagtttcaattgatg 13470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 55801 - 55704
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||  ||||||||| |||   |||||||||| |||||    
T  55801 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtaggaaaatgggtagtttgtaaattatgctcaattg 55704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 473
Target Start/End: Complemental strand, 130803 - 130625
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | | |||| |||||  || ||||||||| || ||||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  130803 aaattcgtgctcatgttgtagagatatgtttggatacgttaattga-tgttaaatgaatggttgatgatgaaataatatgttcataatgtatgaaaatgg 130705  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattgaggtgagaatcaagttttaattgatg 473  Q
    |||||| |||||||||||||||||||| | || ||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  130704 gttgttgtgaaattatgcttaattgatgacttatgacatgttgttgttgaattggggtgtgaatcaagtttcaattgatg 130625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 69; Significance: 9e-31; HSPs: 3)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 7127 - 7199
Alignment:
Q  252 tgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctcttgttttggtgataagttt 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7127 tgtatgaaatgggttgattggaatgaattgataattgttgttaaatttgtgctcttgttttggtgataagttt 7199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 6908 - 6972
Alignment:
Q  3 attgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaa 68  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6908 attgagtgggaacacacctaaacctaaa-cttggagagaaattcattcattcatttcatttcacaa 6972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 7053 - 7128
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    |||||||||||||||||||  || |||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  7053 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcatg 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 42039 - 41883
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattt-tcct 248  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||||||||||||||||| || ||| ||||||||||| | ||||   || |||||| || |    
T  42039 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcatgttcattt--atttcaatttctcat 41942  T
Q  249 tgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    ||||||||||| ||||||||| | |||| ||| ||||||||||||||||||||||||||    
T  41941 tgttgtatgaatatgggttgaattgaataaatggataattgttgttaaattcgtgctct 41883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 42177 - 42117
Alignment:
Q  11 ggaacacacctaaacctaaaacttggagaggaattcattcattcatttcatttcacaaagtt 72  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  42177 ggaacacacctaaacctaaa-cttggagagaaattcattcattcatttcattttacaaagtt 42117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 444
Target Start/End: Original strand, 1509 - 1659
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||||||| |||||||||| |||||||||  ||||||||| ||||||  |||||     
T  1509 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgttcatgatgtatataaatga 1608  T
Q  394 gttgttatga-aattatgcttaattgattaattgtgacatgttgttgttgaa 444  Q
    || ||| ||| ||||||||| ||||||| |||| ||||||||||||||||||    
T  1609 gtagtt-tgagaattatgctcaattgatgaattatgacatgttgttgttgaa 1659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 34331 - 34488
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc-- 247  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||||| ||||| ||| |  ||||||||||| | ||||   |||||||||  |      
T  34331 ttaggagctaaagtgaagctcaagcttgaattgatcattacctaaggtaagagggttagttattatcataatcatgttcattt--attgcaatttctcat 34428  T
Q  248 ttgttgtatgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||| ||||||||| | |||||||| ||||||| ||| ||||||||||||||    
T  34429 ttgttgtatgaatatgggttgaattgaatgaatggataattattgctaaattcgtgctct 34488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34182 - 34253
Alignment:
Q  1 caattgagtgggaacacacctaaacctaaaacttggagaggaattcattcattcatttca-tttcacaaagtt 72  Q
    ||||||||||||||||||||| ||||| |||||||||||| | || |||||||||||||| ||||||||||||    
T  34182 caattgagtgggaacacaccttaacct-aaacttggagagaattttattcattcatttcattttcacaaagtt 34253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 444
Target Start/End: Complemental strand, 353 - 203
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||| ||||| |||| | |||||| |||||||||||||||||  ||||||| |||||||||| |||||||||  ||||||||| ||||||  |||||     
T  353 aaattcttgctcatgttgtagtgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgttcatgatgtatataaatgt 254  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaa 444  Q
    || |||    ||||||||| ||||| | |||| ||||||||||||||||||    
T  253 gtagtttgtgaattatgctcaattgttgaattatgacatgttgttgttgaa 203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 3578 - 3425
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattt-tcct 248  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||||| ||||||  | ||| ||||||||||| | ||||   ||||||||| ||||    
T  3578 ttaggagctaaagtgaagcctaagtttgaattaatcatcatctaaggtaa-ggggttattcttcctcataatcatgttcattt--attgcaatttctcct 3482  T
Q  249 tgttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||| | ||||||||||||||| |||| ||| |||||||| || ||||||||||||||    
T  3481 tgttatgtgaaatgggttgatt-gaataaatggataattgatgctaaattcgtgctct 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 3706 - 3655
Alignment:
Q  22 aaacctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  3706 aaacctaaaacttggagagaaattcattcattccttttcatttcacaaagtt 3655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 158 - 306
Target Start/End: Complemental strand, 13890 - 13741
Alignment:
Q  158 taaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcc--ttgttgta 255  Q
    |||||||||||| ||||||| ||| ||||| | |||||||||||||||| || ||| ||||||||||| ||||||   |||||||||  |  ||||||||    
T  13890 taaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatgtttattt--attgcaatttctcatttgttgta 13793  T
Q  256 tgaa-atgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||| ||||||||| | |||| ||| ||||||||||| ||||||||||||||    
T  13792 tgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctct 13741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 56067 - 56127
Alignment:
Q  246 ccttgttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctct 306  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  56067 ccttgttgtatgaaattggttgattggaatgaatagataattgttgttaaattcgtgctct 56127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 44122 - 44275
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||| |||| | |||||| |||||||||||||||||  ||| ||| |||||||||| |||||||||  ||||||||| ||||||  ||||      
T  44122 aaattcgtgctcatgttgtagtgatatgtttgagtatgttaatttgatggtaattgaattgttgatgatgaaattgcatgttcatgatgtatgtaaataa 44221  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    | ||||||| ||||||  |||| |||||||||||||||||||||    
T  44222 gtagtttgtgagttatgctcaattgacgaattatgacatgttgttgttgaattg 44275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 108127 - 108052
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| ||| || | |||||||||    
T  108127 ttaggagctaaagtgaagctcaagtttgaattgattatagcctaaggtaagggggttagttatcattataatcatg 108052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 447
Target Start/End: Complemental strand, 6130 - 5977
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||| |||||| |||| | |||||| ||||||||||||||| |  ||||||| |||||||||| |||||||||  ||||||||| || ||   ||||||    
T  6130 aaatttgtgctcatgttgtagtgatatgtttgagtatgttaaattgatgataattgaattgttgatgatgaaattgcatgttcatgatataagtaaatgg 6031  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttgttgaattg 447  Q
    || |||    |||| |||| ||||||| | || ||||||||||| |||||||||    
T  6030 gtagtttgtgaattgtgctcaattgatgatttatgacatgttgtagttgaattg 5977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 36 - 160
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  36 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 135  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  136 gtagtttgtaaattatgctcaattg 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 4304 - 4360
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggtt 206  Q
    |||||||||||||||||||  ||||||| ||| ||||| ||||||||||||||||||    
T  4304 ttaggagctaaagtgaagcaaaagtttggattaatcattacctaaggtaagggggtt 4360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 418
Target Start/End: Original strand, 4489 - 4579
Alignment:
Q  328 tatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  4489 tatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 4579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 418
Target Start/End: Complemental strand, 30319 - 30217
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||    
T  30319 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 30220  T
Q  416 ttg 418  Q
    |||    
T  30219 ttg 30217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 418
Target Start/End: Original strand, 193518 - 193620
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||    
T  193518 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 193617  T
Q  416 ttg 418  Q
    |||    
T  193618 ttg 193620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 186561 - 186658
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  186561 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 186658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 880 - 981
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||||||||||||||| || ||||| |||||||||  | ||||   |||||| |||||||||| |||||||||  |||||||||||| | | |||||||    
T  880 aaattcgtgctcttgttatgatgatatgtttgagtaaatgaatttggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaaatgg 979  T
Q  394 gt 395  Q
    ||    
T  980 gt 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 395
Target Start/End: Original strand, 9991 - 10092
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  9991 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 10090  T
Q  394 gt 395  Q
    ||    
T  10091 gt 10092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 31315 - 31412
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  31315 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 31412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 41529 - 41432
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  41529 gtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 41432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 37039 - 37093
Alignment:
Q  251 ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    ||||||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  37039 ttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 37093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 6551 - 6675
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||| ||||||||||  |||  ||||||||||||| |||||||||  || |||||| |||||| |||||||    
T  6551 aaattcgtgcttatgttgtagagatatgtttgaatatgttaatttgatgtcaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgg 6650  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  6651 gtagtttgtaaattatgctcaattg 6675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 10218 - 10289
Alignment:
Q  154 gagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    |||||||||||||||| ||||| |  || ||||| | |||||||||||||||| || |||||||||||||||    
T  10218 gagctaaagtgaagcctaagttggggttaatcatcatctaaggtaagggggtttgtcttcttcataatcatg 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 393
Target Start/End: Original strand, 12733 - 12832
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||||||||||| ||||| |||||| ||||||| || | || | | | |||| |||||||||| |||||||||  |||||||||||| | |||||||||    
T  12733 aaattcgtgctctagttttagtgatatgtttgaggatatgaaattattcataattgaattgttgatgatgaaattgcatgttcataatatgttaaaatgg 12832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 305
Target Start/End: Original strand, 1454 - 1609
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  1454 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 1551  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  1552 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 418
Target Start/End: Original strand, 1020 - 1110
Alignment:
Q  328 tatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattg 418  Q
    ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| |||||    
T  1020 tatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaattg 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 418
Target Start/End: Original strand, 17434 - 17536
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaa 415  Q
    |||| |||||| ||||||||||  ||  |||||||||||||| |||||||||  || |||||| |||||| ||||||||| |||   |||||||||| ||    
T  17434 gatatgtttgaatatgttaatttgattttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctcaa 17533  T
Q  416 ttg 418  Q
    |||    
T  17534 ttg 17536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 447
Target Start/End: Original strand, 3876 - 4002
Alignment:
Q  321 gtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgggttgttatgaaattatgcttaattgat 420  Q
    |||||||||||||||||  ||||| | |||||||||  |||||||||  ||||||||| || |||  |||||||| |||    ||||||| | |||||||    
T  3876 gtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttcatgatatatataaatgggtagtttgtgaattatgttcaattgat 3975  T
Q  421 taattgtgacatgttgttgttgaattg 447  Q
     ||||  ||||||||||| ||||||||    
T  3976 gaattacgacatgttgttattgaattg 4002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 412 - 339
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||| ||||||| ||||||| ||| ||| | | |||||||||||||||| || ||| |||||||||    
T  412 ttaggagctaaattgaagcctaagtttggattaatccttatctaaggtaagggggttagtcttcatcataatca 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 418
Target Start/End: Original strand, 13394 - 13518
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    |||||||||||  |||| | | |||| |||||  ||||||||||  ||| ||||||||| |||| |||||||||  || |||||| |||||| |||||||    
T  13394 aaattcgtgcttatgttgtagagatatgtttggatatgttaatttgatgttaaatgaatggttgatgatgaaattgcaagttcatgatgtatgaaaatgg 13493  T
Q  394 gttgttatgaaattatgcttaattg 418  Q
    || |||   |||||||||| |||||    
T  13494 gtagtttgtaaattatgctcaattg 13518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 13243 - 13317
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  13243 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 13317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 392
Target Start/End: Complemental strand, 15174 - 15098
Alignment:
Q  316 gataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatg 392  Q
    |||| |||||| ||||||||||  ||| |||||||||||||| |||||||||  || |||||| |||||| ||||||    
T  15174 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatg 15098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 22931 - 22776
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| | ||| |  |||||||||| | |    
T  22931 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 22834  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   ||||||||  |||||||||| |||||||||||||    
T  22833 gatttggatgaaatgggttgaaatgaatgaatgaataattgttgctaaattcgtgctc 22776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 27186 - 27031
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgtttgcaattttcctt 249  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||| || ||  ||||||||||| |  || |  |||||||||| | |    
T  27186 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttccttct--ttgcaatttttcat 27089  T
Q  250 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 305  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  27088 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 27031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 45412 - 45337
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatg 225  Q
    ||||||||| || ||||||| ||||||| ||| | ||| | |||||||||||||||| || ||| |||||||||||    
T  45412 ttaggagcttaattgaagcctaagtttggattaaccattatctaaggtaagggggttagtcttcatcataatcatg 45337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 45539 - 45491
Alignment:
Q  25 cctaaaacttggagaggaattcattcatt-catttcatttcacaaagtt 72  Q
    |||||||||||||||| |||||||||||| | |||||||||||| ||||    
T  45539 cctaaaacttggagagaaattcattcattccttttcatttcacagagtt 45491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 123045 - 123128
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattatttt 233  Q
    |||||||||||| ||||||| ||||| | ||| ||| | |||||||||||||||||| || |||  ||||||||| || |||||    
T  123045 ttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcaccataatcatcataatttt 123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 272402 - 272319
Alignment:
Q  152 aggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  272402 aggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 272319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 9257 - 9183
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  9257 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 9183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 3466 - 3540
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcat 224  Q
    |||||||||||||||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  ||||||||||    
T  3466 ttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttgtcataatcat 3540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 1504 - 1419
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||||||||||| |||||   ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  1504 ttaggagctaaagtgaagcctaagttgtgattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 12002 - 12075
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||||||||||| |||||  |||| | ||| | |||||||||||||||| ||| |  |||||||||    
T  12002 ttaggagctaaagtgaagcctaagttaaaattaaacatcatctaaggtaagggggttagttattatcataatca 12075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 439
Target Start/End: Original strand, 12603 - 12748
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcataatgtattaaaatgg 393  Q
    ||||| ||||||| ||||| |||||| | ||| ||||||||| |   |||||| |||||| ||| |||||||||  |||||||||  | |||  |||||     
T  12603 aaatttgtgctctagttttagtgatatgattgggtatgttaacttgttgataattgaattattgatgatgaaattgcatgttcatgttatatataaatga 12702  T
Q  394 gttgttatgaaattatgcttaattgattaattgtgacatgttgttg 439  Q
     |  ||   |||||||||| ||||||| ||||||||||||||||||    
T  12703 ataattgataaattatgctcaattgatgaattgtgacatgttgttg 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 25605 - 25532
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||||| ||||||| |||||||  || ||| | | |||||||||||||||| || ||| |||||||||    
T  25605 ttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagtcttcatcataatca 25532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 379
Target Start/End: Original strand, 67897 - 67982
Alignment:
Q  294 aaattcgtgctcttgttttggtgataagtttgagtatgttaattgaatgataaatgaattgttggtgatgaaataacatgttcata 379  Q
    ||||||||||||||||| || ||||| ||||||||| || || |   |||||| |||||||||| || ||||||  ||||||||||    
T  67897 aaattcgtgctcttgttatgatgatatgtttgagtacgtgaaattggtgataattgaattgttgttggtgaaattgcatgttcata 67982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 146980 - 146895
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  146980 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 146895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 54255 - 54182
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatca 223  Q
    |||||||||| ||||||||| |||||   ||| | ||| | |||||||||||||||| |||||| |||||||||    
T  54255 ttaggagctatagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 54182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 247324 - 247409
Alignment:
Q  150 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttggttttcttcataatcatgattattttgt 235  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||| || ||  |||||||||| || |||||||    
T  247324 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 247409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University