View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6845_low_10 (Length: 338)

Name: NF6845_low_10
Description: NF6845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6845_low_10
NF6845_low_10
[»] chr8 (34 HSPs)
chr8 (9-94)||(21974142-21974227)
chr8 (9-94)||(21978252-21978337)
chr8 (9-94)||(43250237-43250322)
chr8 (9-92)||(14399053-14399136)
chr8 (10-92)||(21409937-21410019)
chr8 (10-92)||(21804429-21804511)
chr8 (10-95)||(23913301-23913384)
chr8 (10-95)||(44385793-44385876)
chr8 (10-96)||(21386195-21386279)
chr8 (10-95)||(23427862-23427945)
chr8 (279-338)||(22110936-22110996)
chr8 (279-338)||(43250696-43250756)
chr8 (9-94)||(21829430-21829504)
chr8 (279-338)||(21973702-21973762)
chr8 (9-92)||(18864076-18864148)
chr8 (290-338)||(21977793-21977842)
chr8 (11-94)||(22110638-22110710)
chr8 (9-92)||(30941536-30941608)
chr8 (286-332)||(15924297-15924344)
chr8 (10-52)||(21328602-21328644)
chr8 (10-62)||(27942675-27942728)
chr8 (285-325)||(20983485-20983525)
chr8 (279-332)||(38550627-38550681)
chr8 (279-338)||(18863826-18863889)
chr8 (12-53)||(21967992-21968033)
chr8 (279-312)||(21977839-21977872)
chr8 (12-53)||(21980832-21980873)
chr8 (12-53)||(21985815-21985856)
chr8 (12-53)||(22000778-22000819)
chr8 (12-53)||(22009196-22009237)
chr8 (279-338)||(30941286-30941349)
chr8 (12-53)||(34950124-34950165)
chr8 (279-320)||(38550705-38550746)
chr8 (285-325)||(20983551-20983591)
[»] chr7 (76 HSPs)
chr7 (9-94)||(31760-31845)
chr7 (9-94)||(12706081-12706166)
chr7 (9-94)||(12713575-12713660)
chr7 (9-94)||(12722233-12722318)
chr7 (9-94)||(16908468-16908553)
chr7 (9-94)||(12717322-12717407)
chr7 (9-94)||(18278029-18278114)
chr7 (9-94)||(18281993-18282078)
chr7 (9-92)||(2833442-2833525)
chr7 (10-92)||(15083262-15083344)
chr7 (10-92)||(39721232-39721314)
chr7 (9-92)||(2531293-2531376)
chr7 (10-92)||(7520176-7520258)
chr7 (10-95)||(20486778-20486861)
chr7 (10-95)||(25928330-25928414)
chr7 (10-95)||(10607280-10607363)
chr7 (10-96)||(18301387-18301471)
chr7 (10-95)||(16582457-16582540)
chr7 (10-71)||(26291193-26291254)
chr7 (10-96)||(9752466-9752550)
chr7 (12-96)||(1859979-1860062)
chr7 (12-96)||(13919370-13919453)
chr7 (279-332)||(2833200-2833253)
chr7 (279-332)||(18278264-18278317)
chr7 (279-332)||(18282227-18282280)
chr7 (279-338)||(31994-32054)
chr7 (279-338)||(12713809-12713869)
chr7 (279-338)||(12717633-12717693)
chr7 (279-338)||(12722544-12722604)
chr7 (10-65)||(39268301-39268356)
chr7 (10-62)||(11660318-11660370)
chr7 (10-62)||(13891666-13891718)
chr7 (9-94)||(72341-72415)
chr7 (9-94)||(76450-76524)
chr7 (279-332)||(2531050-2531104)
chr7 (279-332)||(26291374-26291428)
chr7 (9-92)||(45171472-45171544)
chr7 (10-58)||(13892049-13892097)
chr7 (9-60)||(18424270-18424321)
chr7 (294-331)||(18282274-18282311)
chr7 (10-62)||(14420823-14420875)
chr7 (10-62)||(16005040-16005092)
chr7 (10-62)||(18606374-18606426)
chr7 (10-62)||(18871333-18871385)
chr7 (10-62)||(838123-838176)
chr7 (10-62)||(1203303-1203356)
chr7 (10-62)||(16109965-16110018)
chr7 (294-331)||(18278311-18278348)
chr7 (10-62)||(146536-146588)
chr7 (285-325)||(6170760-6170800)
chr7 (10-62)||(10897887-10897939)
chr7 (279-338)||(15112352-15112412)
chr7 (279-338)||(15115924-15115984)
chr7 (295-338)||(18278344-18278388)
chr7 (287-323)||(18424601-18424637)
chr7 (287-323)||(18424714-18424750)
chr7 (279-327)||(25928194-25928242)
chr7 (279-325)||(6170826-6170872)
chr7 (279-325)||(9390377-9390423)
chr7 (10-52)||(15213084-15213126)
chr7 (279-332)||(16582665-16582719)
chr7 (10-62)||(834035-834088)
chr7 (10-62)||(1199215-1199268)
chr7 (294-327)||(2833173-2833206)
chr7 (279-320)||(8467864-8467905)
chr7 (279-320)||(10502048-10502089)
chr7 (287-324)||(10607142-10607179)
chr7 (279-320)||(14270754-14270795)
chr7 (12-53)||(16185562-16185603)
chr7 (279-320)||(17231859-17231900)
chr7 (279-320)||(17231924-17231965)
chr7 (279-320)||(17231989-17232030)
chr7 (279-320)||(17232054-17232095)
chr7 (294-338)||(18282306-18282351)
chr7 (279-338)||(45171222-45171285)
chr7 (9-41)||(23666464-23666496)
[»] chr6 (48 HSPs)
chr6 (9-94)||(8242447-8242532)
chr6 (9-94)||(11565436-11565521)
chr6 (9-94)||(12620292-12620377)
chr6 (9-94)||(23988338-23988423)
chr6 (9-94)||(22861790-22861875)
chr6 (9-95)||(11716898-11716984)
chr6 (9-92)||(27555574-27555657)
chr6 (9-92)||(22075347-22075434)
chr6 (10-95)||(2076322-2076405)
chr6 (10-96)||(18918539-18918623)
chr6 (10-71)||(23400714-23400775)
chr6 (9-96)||(14470916-14471001)
chr6 (279-338)||(8242759-8242819)
chr6 (279-338)||(11565747-11565807)
chr6 (279-338)||(12620003-12620063)
chr6 (279-338)||(22948002-22948062)
chr6 (279-338)||(22951958-22952018)
chr6 (279-338)||(23870446-23870506)
chr6 (279-338)||(23874402-23874462)
chr6 (279-338)||(23988845-23988905)
chr6 (9-94)||(22947702-22947776)
chr6 (9-94)||(22951658-22951732)
chr6 (9-94)||(23870146-23870220)
chr6 (9-94)||(23874102-23874176)
chr6 (10-71)||(18953465-18953526)
chr6 (279-332)||(1643552-1643606)
chr6 (9-92)||(19869222-19869294)
chr6 (279-327)||(22075110-22075158)
chr6 (9-92)||(23393676-23393748)
chr6 (9-92)||(23413584-23413656)
chr6 (9-94)||(16758750-16758824)
chr6 (43-96)||(1643321-1643372)
chr6 (279-332)||(18918416-18918469)
chr6 (10-62)||(23538017-23538069)
chr6 (10-62)||(27222868-27222920)
chr6 (9-60)||(16622870-16622921)
chr6 (9-60)||(31479455-31479506)
chr6 (10-62)||(12941257-12941309)
chr6 (9-40)||(27416540-27416571)
chr6 (285-327)||(22075077-22075119)
chr6 (10-52)||(25737928-25737970)
chr6 (10-52)||(34297773-34297815)
chr6 (279-338)||(19869481-19869544)
chr6 (279-338)||(23393935-23393998)
chr6 (279-338)||(23413843-23413906)
chr6 (287-323)||(16623154-16623190)
chr6 (279-307)||(18953242-18953270)
chr6 (10-62)||(28290885-28290937)
[»] chr5 (44 HSPs)
chr5 (9-94)||(19474131-19474216)
chr5 (9-94)||(20294549-20294634)
chr5 (9-92)||(18354832-18354915)
chr5 (9-85)||(24768530-24768606)
chr5 (9-96)||(20912211-20912296)
chr5 (9-96)||(15238076-15238161)
chr5 (9-95)||(22108409-22108493)
chr5 (9-96)||(40727358-40727443)
chr5 (10-95)||(22120551-22120634)
chr5 (279-332)||(18355055-18355108)
chr5 (279-332)||(24768237-24768290)
chr5 (279-338)||(19473845-19473905)
chr5 (279-338)||(20294786-20294846)
chr5 (9-92)||(11219590-11219662)
chr5 (9-92)||(11224176-11224248)
chr5 (9-92)||(11226192-11226264)
chr5 (9-92)||(11227998-11228070)
chr5 (9-92)||(11229988-11230060)
chr5 (9-60)||(10751852-10751903)
chr5 (10-62)||(19510498-19510550)
chr5 (10-62)||(22339048-22339100)
chr5 (10-62)||(23113393-23113445)
chr5 (10-62)||(28372072-28372124)
chr5 (10-62)||(37599999-37600051)
chr5 (10-62)||(38146409-38146461)
chr5 (288-338)||(11226427-11226478)
chr5 (11-62)||(41878642-41878693)
chr5 (279-319)||(20912104-20912144)
chr5 (287-327)||(22108196-22108236)
chr5 (10-62)||(22335518-22335570)
chr5 (10-62)||(22749197-22749249)
chr5 (9-48)||(9774975-9775014)
chr5 (279-325)||(5889817-5889863)
chr5 (287-332)||(22120335-22120381)
chr5 (10-52)||(36459584-36459626)
chr5 (279-338)||(11219849-11219912)
chr5 (279-338)||(11224435-11224498)
chr5 (279-338)||(11228257-11228320)
chr5 (279-338)||(11230247-11230310)
chr5 (10-59)||(39362978-39363027)
chr5 (293-325)||(5889886-5889918)
chr5 (299-338)||(18355179-18355219)
chr5 (280-324)||(20912132-20912176)
chr5 (299-338)||(40727082-40727122)
[»] chr4 (45 HSPs)
chr4 (9-94)||(9555104-9555189)
chr4 (9-94)||(14758950-14759035)
chr4 (9-94)||(14955718-14955803)
chr4 (9-94)||(17807089-17807174)
chr4 (9-94)||(25688477-25688562)
chr4 (9-94)||(4562732-4562817)
chr4 (9-94)||(5758414-5758499)
chr4 (9-94)||(33740871-33740956)
chr4 (10-92)||(20158408-20158490)
chr4 (9-92)||(20163859-20163942)
chr4 (9-94)||(12486306-12486388)
chr4 (9-92)||(20161084-20161167)
chr4 (10-96)||(23996925-23997009)
chr4 (10-92)||(10711861-10711943)
chr4 (10-92)||(10925631-10925713)
chr4 (10-95)||(17052405-17052488)
chr4 (11-95)||(12422980-12423062)
chr4 (10-96)||(631706-631790)
chr4 (10-96)||(22634885-22634969)
chr4 (10-96)||(27532788-27532872)
chr4 (279-338)||(4562446-4562506)
chr4 (279-338)||(9555415-9555475)
chr4 (279-338)||(14758587-14758647)
chr4 (279-338)||(14955352-14955412)
chr4 (279-338)||(25688788-25688848)
chr4 (279-338)||(33741185-33741245)
chr4 (10-65)||(13813820-13813875)
chr4 (10-65)||(13818308-13818363)
chr4 (279-338)||(5757971-5758031)
chr4 (10-62)||(24048375-24048427)
chr4 (9-60)||(15223581-15223632)
chr4 (279-332)||(27532942-27532995)
chr4 (10-62)||(15533255-15533307)
chr4 (10-62)||(18211640-18211692)
chr4 (10-62)||(49549073-49549125)
chr4 (279-325)||(15189737-15189783)
chr4 (279-325)||(15189770-15189816)
chr4 (10-62)||(30145819-30145872)
chr4 (287-323)||(15223912-15223948)
chr4 (10-62)||(36036988-36037040)
chr4 (279-325)||(631590-631636)
chr4 (280-325)||(12423189-12423234)
chr4 (279-338)||(12486537-12486600)
chr4 (279-320)||(15481998-15482039)
chr4 (279-320)||(19857007-19857048)
[»] chr3 (81 HSPs)
chr3 (9-94)||(7108273-7108358)
chr3 (9-94)||(7112208-7112293)
chr3 (9-94)||(11068648-11068733)
chr3 (9-94)||(22320164-22320249)
chr3 (9-94)||(22335219-22335304)
chr3 (9-94)||(55021411-55021496)
chr3 (9-94)||(11167052-11167137)
chr3 (9-94)||(14497982-14498067)
chr3 (9-94)||(28948496-28948581)
chr3 (9-92)||(5219882-5219965)
chr3 (9-92)||(11853741-11853824)
chr3 (10-92)||(37440641-37440723)
chr3 (9-94)||(15616212-15616297)
chr3 (9-92)||(11301626-11301709)
chr3 (9-92)||(14664460-14664543)
chr3 (9-92)||(14667624-14667707)
chr3 (10-95)||(16795539-16795622)
chr3 (10-93)||(12853325-12853406)
chr3 (10-71)||(18933337-18933398)
chr3 (10-71)||(30064421-30064482)
chr3 (10-96)||(4590119-4590203)
chr3 (10-95)||(14670062-14670142)
chr3 (10-96)||(14068021-14068105)
chr3 (10-96)||(17318468-17318552)
chr3 (12-96)||(15463916-15463999)
chr3 (279-338)||(7108584-7108644)
chr3 (279-338)||(7112519-7112579)
chr3 (279-338)||(11069036-11069096)
chr3 (279-327)||(11301389-11301437)
chr3 (9-68)||(12337291-12337348)
chr3 (279-338)||(14498293-14498353)
chr3 (279-338)||(15616523-15616583)
chr3 (279-338)||(22320552-22320612)
chr3 (279-338)||(22335607-22335667)
chr3 (279-338)||(28948730-28948790)
chr3 (279-338)||(30064735-30064795)
chr3 (279-338)||(55021873-55021933)
chr3 (279-338)||(11166689-11166749)
chr3 (279-327)||(14664735-14664783)
chr3 (279-327)||(14667899-14667947)
chr3 (52-94)||(4112607-4112649)
chr3 (52-93)||(4108759-4108800)
chr3 (10-59)||(10834935-10834984)
chr3 (10-95)||(14681586-14681664)
chr3 (10-62)||(13435854-13435906)
chr3 (279-338)||(14067687-14067747)
chr3 (9-59)||(16751895-16751945)
chr3 (13-62)||(8928858-8928907)
chr3 (9-92)||(15963532-15963604)
chr3 (9-92)||(15967456-15967528)
chr3 (9-92)||(15971380-15971452)
chr3 (10-62)||(3802006-3802058)
chr3 (279-323)||(4589893-4589936)
chr3 (10-62)||(14764786-14764838)
chr3 (10-62)||(20249840-20249892)
chr3 (10-62)||(29545929-29545981)
chr3 (10-62)||(54519633-54519685)
chr3 (10-61)||(18899489-18899540)
chr3 (10-52)||(11912463-11912505)
chr3 (279-327)||(14067732-14067777)
chr3 (279-325)||(18440583-18440629)
chr3 (279-325)||(19485657-19485703)
chr3 (279-325)||(49390328-49390374)
chr3 (9-48)||(4108793-4108833)
chr3 (9-48)||(4112642-4112682)
chr3 (10-62)||(9532294-9532346)
chr3 (10-62)||(12304210-12304262)
chr3 (287-323)||(16751580-16751616)
chr3 (287-323)||(19774548-19774584)
chr3 (10-53)||(8491732-8491775)
chr3 (9-60)||(19774233-19774284)
chr3 (11-62)||(23372534-23372585)
chr3 (11-62)||(51299570-51299621)
chr3 (279-325)||(18440505-18440551)
chr3 (279-325)||(19485579-19485625)
chr3 (279-338)||(15963791-15963854)
chr3 (279-338)||(15967715-15967778)
chr3 (279-338)||(15971639-15971702)
chr3 (49-96)||(8490350-8490395)
chr3 (11-62)||(23173334-23173386)
chr3 (279-307)||(27410959-27410987)
[»] chr2 (27 HSPs)
chr2 (9-94)||(24630006-24630091)
chr2 (9-94)||(24645186-24645271)
chr2 (9-94)||(24647962-24648047)
chr2 (9-94)||(27600406-27600491)
chr2 (9-94)||(30346616-30346701)
chr2 (9-94)||(10103255-10103340)
chr2 (9-94)||(12902565-12902650)
chr2 (9-94)||(27380952-27381037)
chr2 (9-94)||(27384922-27385007)
chr2 (9-92)||(31343952-31344035)
chr2 (10-95)||(9784030-9784113)
chr2 (279-338)||(10102969-10103029)
chr2 (279-338)||(24629640-24629700)
chr2 (279-338)||(27600717-27600777)
chr2 (279-338)||(30346176-30346236)
chr2 (279-332)||(31344221-31344274)
chr2 (279-338)||(27384559-27384619)
chr2 (281-338)||(27380513-27380571)
chr2 (9-92)||(41532414-41532486)
chr2 (9-46)||(24647129-24647166)
chr2 (10-62)||(6481820-6481872)
chr2 (10-62)||(6485287-6485339)
chr2 (10-62)||(19663548-19663600)
chr2 (10-62)||(20260293-20260345)
chr2 (10-62)||(21074498-21074550)
chr2 (10-59)||(9240710-9240759)
chr2 (279-338)||(41532164-41532227)
[»] chr1 (36 HSPs)
chr1 (9-94)||(1009297-1009382)
chr1 (9-94)||(1926754-1926839)
chr1 (9-94)||(16376774-16376859)
chr1 (9-94)||(20925768-20925853)
chr1 (9-94)||(52634303-52634388)
chr1 (9-92)||(33796068-33796151)
chr1 (10-95)||(22132058-22132141)
chr1 (10-96)||(21406289-21406373)
chr1 (10-95)||(41801238-41801321)
chr1 (10-71)||(20230120-20230181)
chr1 (279-332)||(33796291-33796344)
chr1 (279-338)||(1009608-1009668)
chr1 (279-338)||(1926314-1926374)
chr1 (279-338)||(16376565-16376625)
chr1 (279-338)||(20925328-20925388)
chr1 (279-338)||(52634694-52634754)
chr1 (279-333)||(21406553-21406608)
chr1 (279-332)||(20229941-20229995)
chr1 (9-60)||(39245163-39245214)
chr1 (9-60)||(39248718-39248769)
chr1 (9-60)||(41389657-41389708)
chr1 (10-62)||(16370961-16371013)
chr1 (279-325)||(28195107-28195153)
chr1 (279-325)||(35982340-35982386)
chr1 (279-320)||(21740484-21740525)
chr1 (279-338)||(12271028-12271088)
chr1 (287-338)||(33796436-33796488)
chr1 (287-323)||(39244891-39244927)
chr1 (287-323)||(39248446-39248482)
chr1 (287-323)||(41389339-41389375)
chr1 (279-327)||(41801091-41801139)
chr1 (12-53)||(11809949-11809990)
chr1 (279-320)||(20315609-20315650)
chr1 (279-320)||(41306242-41306283)
chr1 (285-325)||(21740349-21740389)
chr1 (279-327)||(41801124-41801171)
[»] scaffold0372 (2 HSPs)
scaffold0372 (9-94)||(6279-6364)
scaffold0372 (280-338)||(6180-6239)
[»] scaffold0061 (2 HSPs)
scaffold0061 (13-94)||(68514-68595)
scaffold0061 (288-338)||(68341-68392)
[»] scaffold0028 (1 HSPs)
scaffold0028 (9-94)||(60283-60369)
[»] scaffold0349 (2 HSPs)
scaffold0349 (9-94)||(11086-11170)
scaffold0349 (279-338)||(11402-11462)
[»] scaffold1852 (1 HSPs)
scaffold1852 (9-92)||(781-864)
[»] scaffold0410 (1 HSPs)
scaffold0410 (9-92)||(14879-14962)
[»] scaffold0166 (2 HSPs)
scaffold0166 (9-85)||(11027-11103)
scaffold0166 (279-332)||(10734-10787)
[»] scaffold0486 (2 HSPs)
scaffold0486 (9-92)||(8612-8695)
scaffold0486 (279-327)||(8885-8933)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-94)||(34089-34171)
scaffold0157 (279-338)||(33877-33940)
[»] scaffold0023 (1 HSPs)
scaffold0023 (10-92)||(11813-11895)
[»] scaffold0293 (2 HSPs)
scaffold0293 (10-95)||(21298-21382)
scaffold0293 (279-327)||(21162-21210)
[»] scaffold0575 (2 HSPs)
scaffold0575 (10-95)||(6920-7003)
scaffold0575 (279-327)||(6842-6889)
[»] scaffold0124 (2 HSPs)
scaffold0124 (10-96)||(25526-25610)
scaffold0124 (280-325)||(25446-25491)
[»] scaffold0380 (3 HSPs)
scaffold0380 (10-96)||(4010-4094)
scaffold0380 (279-332)||(955-1009)
scaffold0380 (53-96)||(1-42)
[»] scaffold0142 (2 HSPs)
scaffold0142 (10-95)||(8699-8782)
scaffold0142 (294-327)||(8467-8500)
[»] scaffold0013 (2 HSPs)
scaffold0013 (10-95)||(74291-74374)
scaffold0013 (293-332)||(74077-74117)
[»] scaffold0327 (3 HSPs)
scaffold0327 (10-95)||(18859-18942)
scaffold0327 (279-327)||(19128-19176)
scaffold0327 (279-327)||(19232-19280)
[»] scaffold0109 (1 HSPs)
scaffold0109 (10-71)||(37179-37240)
[»] scaffold0029 (5 HSPs)
scaffold0029 (10-71)||(62821-62882)
scaffold0029 (279-332)||(79428-79481)
scaffold0029 (279-332)||(62568-62621)
scaffold0029 (279-332)||(66484-66537)
scaffold0029 (294-338)||(79475-79520)
[»] scaffold0299 (1 HSPs)
scaffold0299 (9-68)||(5860-5917)
[»] scaffold0200 (4 HSPs)
scaffold0200 (279-327)||(11061-11109)
scaffold0200 (52-92)||(10834-10874)
scaffold0200 (10-48)||(10803-10841)
scaffold0200 (279-332)||(11094-11148)
[»] scaffold0031 (1 HSPs)
scaffold0031 (10-95)||(37161-37245)
[»] scaffold0525 (2 HSPs)
scaffold0525 (9-96)||(5489-5574)
scaffold0525 (279-338)||(5019-5079)
[»] scaffold0080 (2 HSPs)
scaffold0080 (11-62)||(28509-28560)
scaffold0080 (11-62)||(33974-34025)
[»] scaffold0141 (2 HSPs)
scaffold0141 (9-92)||(15546-15618)
scaffold0141 (279-338)||(15296-15359)
[»] scaffold1427 (1 HSPs)
scaffold1427 (10-62)||(236-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (10-62)||(5278-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (10-62)||(10812-10864)
[»] scaffold0026 (1 HSPs)
scaffold0026 (10-62)||(109637-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-62)||(224133-224185)
[»] scaffold0599 (1 HSPs)
scaffold0599 (10-52)||(4157-4199)
[»] scaffold1873 (1 HSPs)
scaffold1873 (33-96)||(691-753)
[»] scaffold0544 (1 HSPs)
scaffold0544 (11-62)||(3507-3558)
[»] scaffold0139 (1 HSPs)
scaffold0139 (10-53)||(23937-23980)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-40)||(70790-70821)
[»] scaffold0601 (2 HSPs)
scaffold0601 (287-325)||(8555-8593)
scaffold0601 (279-325)||(8621-8667)
[»] scaffold0278 (1 HSPs)
scaffold0278 (279-320)||(6963-7004)
[»] scaffold0116 (2 HSPs)
scaffold0116 (279-320)||(44439-44480)
scaffold0116 (279-320)||(44504-44545)
[»] scaffold0043 (1 HSPs)
scaffold0043 (279-320)||(9072-9113)
[»] scaffold0001 (1 HSPs)
scaffold0001 (25-62)||(153803-153840)
[»] scaffold0004 (1 HSPs)
scaffold0004 (285-325)||(362226-362266)


Alignment Details
Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 21974227 - 21974142
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974227 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 21978337 - 21978252
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978337 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21978252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 43250237 - 43250322
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43250237 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatcatc 43250322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 14399136 - 14399053
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14399136 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 21409937 - 21410019
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21409937 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 21804429 - 21804511
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21804429 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 23913301 - 23913384
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  23913301 catcatcaagtacatttaacaacttatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 23913384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 44385876 - 44385793
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  44385876 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaacaactt--aaacaacacaatataatcatca 44385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 21386195 - 21386279
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  21386195 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21386279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 23427862 - 23427945
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  23427862 catcattaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--agacaacacaatataatcatca 23427945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 22110936 - 22110996
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22110936 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22110996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 43250696 - 43250756
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43250696 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 43250756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 21829504 - 21829430
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  21829504 acatcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatataatcatc 21829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 21973762 - 21973702
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  21973762 tcatcttcttgtattaatataacaacaaggtattcatcatcttatgaaaatataatcaaca 21973702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 18864148 - 18864076
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  18864148 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 18864076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 21977842 - 21977793
Alignment:
Q  290 tattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21977842 tattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 21977793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 22110638 - 22110710
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||||||||    
T  22110638 atcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacataatataatcatc 22110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 30941608 - 30941536
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  30941608 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 30941536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 15924344 - 15924297
Alignment:
Q  286 cttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15924344 cttatattaatataacaacaacgtattcatcatcttatgaaaatataa 15924297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 21328602 - 21328644
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  21328602 catcatcaagtacatttaacaactcatagataacatcatgtaa 21328644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 27942728 - 27942675
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  27942728 catcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 27942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 20983525 - 20983485
Alignment:
Q  285 tcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  20983525 tcttataataatataacaacaacatattcatcatcttataa 20983485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 38550681 - 38550627
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| || |||||||||    
T  38550681 tcatcatcttataataatataacaacaacatattcatcatctcatcaaaatataa 38550627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 18863889 - 18863826
Alignment:
Q  279 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| |||||||||||||||    
T  18863889 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 18863826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21968033 - 21967992
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  21968033 tcatcaagtacatttaacaactcataggtaacatcatgtaat 21967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 21977872 - 21977839
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtatt 312  Q
    |||||||||| |||||||||||||||||||||||    
T  21977872 tcatcttcttgtattaatataacaacaacgtatt 21977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21980873 - 21980832
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  21980873 tcatcaagtacatttaacaactcataggtaacatcatgtaat 21980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21985856 - 21985815
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  21985856 tcatcaagtacatttaacaactcataggtaacatcatgtaat 21985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 22000819 - 22000778
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  22000819 tcatcaagtacatttaacaactcataggtaacatcatgtaat 22000778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 22009237 - 22009196
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  22009237 tcatcaagtacatttaacaactcataggtaacatcatgtaat 22009196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 30941349 - 30941286
Alignment:
Q  279 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| |||||||||||||||    
T  30941349 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 30941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 34950124 - 34950165
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  34950124 tcatcaagtacatttaacaactcataggtaacatcatgtaat 34950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 38550746 - 38550705
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  38550746 tcatcatcttataataatataacaacaacatattcatcatct 38550705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 20983591 - 20983551
Alignment:
Q  285 tcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||||| ||||||||| ||||| |||||||||||||||||    
T  20983591 tcttataataatataaccacaacatattcatcatcttataa 20983551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 31760 - 31845
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31760 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 31845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 12706166 - 12706081
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706166 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12706081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 12713575 - 12713660
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713575 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 12722233 - 12722318
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722233 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12722318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 16908553 - 16908468
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908553 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16908468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 12717322 - 12717407
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717322 acatcagcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 18278029 - 18278114
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18278029 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatcatc 18278114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 18281993 - 18282078
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18281993 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatcatc 18282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 2833525 - 2833442
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2833525 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 15083262 - 15083344
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15083262 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 39721232 - 39721314
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  39721232 catcatcaagtacatttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 2531376 - 2531293
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  2531376 acatcatcaagtacacctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 7520258 - 7520176
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7520258 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 20486778 - 20486861
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20486778 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 20486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 25928414 - 25928330
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25928414 catcataaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 25928330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 10607363 - 10607280
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  10607363 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 10607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 18301387 - 18301471
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  18301387 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 18301471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 16582457 - 16582540
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  16582457 catcatcaagtacatttaacaactcataaataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 16582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 26291193 - 26291254
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26291193 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 26291254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 9752550 - 9752466
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||||| ||||||||    
T  9752550 catcaccaagtacatttaacaactcatagataacatcatgtaattatcatcactaataactt--aaacaacacaatatgatcatcac 9752466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 1860062 - 1859979
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  1860062 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 1859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 13919453 - 13919370
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  13919453 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 13919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 2833253 - 2833200
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2833253 tcatcttcttataataatataacaacaacgtattcatcatcttataaaatataa 2833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 18278264 - 18278317
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18278264 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 18278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 18282227 - 18282280
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18282227 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 18282280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 31994 - 32054
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31994 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 32054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 12713809 - 12713869
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12713809 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12713869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 12717633 - 12717693
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12717633 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12717693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 12722544 - 12722604
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12722544 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12722604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 39268356 - 39268301
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 65  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  39268356 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 11660318 - 11660370
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11660318 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 13891666 - 13891718
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13891666 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 72415 - 72341
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  72415 acatcatcaagtacacttaacaattcatagatatcatcat-----------cactaataactttaaaacaacacaatataatcatc 72341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 76524 - 76450
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  76524 acatcatcaagtacacttaacaattcatagatatcatcat-----------cactaataactttaaaacaacacaatataatcatc 76450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 2531104 - 2531050
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  2531104 tcatcttcttatattaatataacaacaacgtaatcatcatcttatgaaaatataa 2531050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 26291374 - 26291428
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26291374 tcattttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 26291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 45171544 - 45171472
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  45171544 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 45171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 13892049 - 13892097
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatca 58  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  13892049 catcatcaagtacatttaacaactcatagataacatcatgtaatcatca 13892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 18424270 - 18424321
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  18424270 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 18424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 18282274 - 18282311
Alignment:
Q  294 aatataacaacaacgtattcatcatcttataaaatata 331  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18282274 aatataacaacaacgtattcatcatcttataaaatata 18282311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 14420823 - 14420875
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  14420823 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 14420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 16005040 - 16005092
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  16005040 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 16005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 18606374 - 18606426
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  18606374 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 18871333 - 18871385
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  18871333 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 838176 - 838123
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  838176 catcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 838123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 1203356 - 1203303
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  1203356 catcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 1203303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 16110018 - 16109965
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  16110018 catcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 16109965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 331
Target Start/End: Original strand, 18278311 - 18278348
Alignment:
Q  294 aatataacaacaacgtattcatcatcttataaaatata 331  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18278311 aatataacaacaacgtattcatcatcttataagatata 18278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 146536 - 146588
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  146536 catcatcaagtacatttaacaactcatagataacatcgcataatcatcatcac 146588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 6170800 - 6170760
Alignment:
Q  285 tcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  6170800 tcttataataatataacaacaacatattcatcatcttataa 6170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 10897939 - 10897887
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||| ||||||||||| |||||  |||||||||||||    
T  10897939 catcatcaagtacatttaacgactcatagataacatcacataatcatcatcac 10897887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 15112352 - 15112412
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 338  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  15112352 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 15112412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 15115924 - 15115984
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 338  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  15115924 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 15115984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 338
Target Start/End: Original strand, 18278344 - 18278388
Alignment:
Q  295 atataacaacaacgtattcatcatcttata-aaatataatcaaca 338  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||    
T  18278344 atatagcaacaacgtattcatcatcttatataaatataatcaaca 18278388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 18424601 - 18424637
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18424601 ttataataatataacaacaacgtattcatcatcttat 18424637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 18424714 - 18424750
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18424714 ttataataatataacaacaacgtattcatcatcttat 18424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 25928242 - 25928194
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  25928242 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 25928194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 6170872 - 6170826
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  6170872 tcatcatcttataataatatgacaacaacatattcatcatcttataa 6170826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 9390423 - 9390377
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  9390423 tcatcatcttataataatataacaacatcatattcatcatcttataa 9390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 15213084 - 15213126
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    |||||||||||||| |||||||||||| |||| ||||||||||    
T  15213084 catcatcaagtacatttaacaactcatggataacatcatgtaa 15213126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 16582665 - 16582719
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttata-aaatataa 332  Q
    ||||| ||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  16582665 tcatcatcttataataatataacaacaacatattcaccatcttatagaaatataa 16582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 834088 - 834035
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||| | ||||||||||||||  || ||||||||||||||||||||    
T  834088 catcatcaagtagaattaacaactcatagcttaacatcatgtaatcatcatcac 834035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 1199268 - 1199215
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||| | ||||||||||||||  || ||||||||||||||||||||    
T  1199268 catcatcaagtagaattaacaactcatagcttaacatcatgtaatcatcatcac 1199215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 2833206 - 2833173
Alignment:
Q  294 aatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||| |||||||||||||||||||    
T  2833206 aatataacaacaacatattcatcatcttataaaa 2833173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 8467864 - 8467905
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  8467864 tcatcatcttataataatataacaacaacatattcatcatct 8467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 10502089 - 10502048
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||    
T  10502089 tcatcatcttatattaatataacaacaacatattcctcatct 10502048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 10607179 - 10607142
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttata 324  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  10607179 ttataataatataacaacaacatattcatcatcttata 10607142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 14270795 - 14270754
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  14270795 tcatcatcttataataatataacaacaacatattcatcatct 14270754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 16185562 - 16185603
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  16185562 tcatcaagtacatttaacaactcataggtaacatcatgtaat 16185603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 17231859 - 17231900
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231859 tcatcatcttataataatataacaacaacatattcatcatct 17231900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 17231924 - 17231965
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231924 tcatcatcttataataatataacaacaacatattcatcatct 17231965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 17231989 - 17232030
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231989 tcatcatcttataataatataacaacaacatattcatcatct 17232030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 17232054 - 17232095
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17232054 tcatcatcttataataatataacaacaacatattcatcatct 17232095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 18282306 - 18282351
Alignment:
Q  294 aatataacaacaacgtattcatcatcttata-aaatataatcaaca 338  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||    
T  18282306 aatatagcaacgacgtattcatcatcttatataaatataatcaaca 18282351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 45171285 - 45171222
Alignment:
Q  279 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| |||||||||||||||    
T  45171285 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 45171222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 23666496 - 23666464
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagata 41  Q
    ||||||||||||||| |||||||||||||||||    
T  23666496 acatcatcaagtacatttaacaactcatagata 23666464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 8242447 - 8242532
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242447 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 8242532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 11565436 - 11565521
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565436 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 12620377 - 12620292
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620377 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12620292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 23988338 - 23988423
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988338 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 23988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22861790 - 22861875
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861790 acatcaccaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 11716984 - 11716898
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  11716984 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataaacatca 11716898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 27555574 - 27555657
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  27555574 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaactcaatgtaatca 27555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 22075434 - 22075347
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatat----catcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22075434 acatcatcaagtacacttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 2076322 - 2076405
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2076322 catcatcaaatacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 2076405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 18918623 - 18918539
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| | ||||||||||||||||    
T  18918623 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactatacaatataatcatcac 18918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 23400714 - 23400775
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  23400714 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt 23400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 14470916 - 14471001
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  14470916 acatcatcaagtacacctaacaactcataaatatcttcatataatcttcatcactaataactt--aaactacacaatataatcatcac 14471001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 8242759 - 8242819
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8242759 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 8242819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11565747 - 11565807
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11565747 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11565807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 12620063 - 12620003
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12620063 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 12620003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 22948002 - 22948062
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22948002 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22948062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 22951958 - 22952018
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22951958 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22952018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 23870446 - 23870506
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23870446 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 23870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 23874402 - 23874462
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23874402 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 23874462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 23988845 - 23988905
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23988845 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 23988905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22947702 - 22947776
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  22947702 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 22947776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22951658 - 22951732
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  22951658 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 22951732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 23870146 - 23870220
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  23870146 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 23870220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 23874102 - 23874176
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  23874102 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 23874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 18953526 - 18953465
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  18953526 catcatcaagtacatttaacaactcctagatgacatcatgtaatcatcatcactaataactt 18953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 1643552 - 1643606
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  1643552 tcatctccttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1643606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 19869222 - 19869294
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  19869222 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 19869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 22075158 - 22075110
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  22075158 tcatcttcttatattaatataacaacaacntattaatcatcttataaaa 22075110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 23393676 - 23393748
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  23393676 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 23393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 23413584 - 23413656
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  23413584 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 23413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 16758750 - 16758824
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||| |||||||||||||||           ||||||||||||| |||||||||||||||||||||||||    
T  16758750 acatcatcaagtacacttaataactcatagatatca-----------tcatcactaataaatttaaaacaacacaatataatcatc 16758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 1643321 - 1643372
Alignment:
Q  43 catcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  1643321 catcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 1643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 18918469 - 18918416
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  18918469 tcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa 18918416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 23538017 - 23538069
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||| |||||    
T  23538017 catcatcaagtacatttaacaactcatagacaacatcatgtaatcattatcac 23538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 27222868 - 27222920
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  27222868 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 27222920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 16622870 - 16622921
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| ||||||| |||||||||  |||||||||||||||||    
T  16622870 acatcatcaagtacatttaacaattcatagataatatcatgtaatcatcatc 16622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 31479506 - 31479455
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    |||||||||| |||| |||||||||||||||||  |||||||||||||||||    
T  31479506 acatcatcaaatacatttaacaactcatagataatatcatgtaatcatcatc 31479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 12941257 - 12941309
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  12941257 catcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 12941309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 27416571 - 27416540
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagat 40  Q
    ||||||||||||||||||||||||||||||||    
T  27416571 acatcatcaagtacacttaacaactcatagat 27416540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Complemental strand, 22075119 - 22075077
Alignment:
Q  285 tcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||  |||||||||||||| |||||||||||||||||||    
T  22075119 tcttataaaaatataacaacaacatattcatcatcttataaaa 22075077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 25737928 - 25737970
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||    
T  25737928 catcatcaagtacatttaccaactcatagataacatcatgtaa 25737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 34297815 - 34297773
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||    
T  34297815 catcagcaagtacatttaacaactcatagataacatcatgtaa 34297773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 19869481 - 19869544
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  19869481 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 19869544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 23393935 - 23393998
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  23393935 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 23393998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 23413843 - 23413906
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  23413843 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 23413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 16623154 - 16623190
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  16623154 ttataataatataacaacaacatattcatcatcttat 16623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 18953270 - 18953242
Alignment:
Q  279 tcatcttcttatattaatataacaacaac 307  Q
    |||||||||||||||||||||||||||||    
T  18953270 tcatcttcttatattaatataacaacaac 18953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 28290937 - 28290885
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||| ||||||| ||||   |||||||||||||    
T  28290937 catcatcaagtacatttaacaacttatagataacatctcataatcatcatcac 28290885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 19474216 - 19474131
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474216 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 19474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 20294549 - 20294634
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294549 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20294634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 18354832 - 18354915
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18354832 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 24768606 - 24768530
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768606 acatcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 24768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 20912296 - 20912211
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  20912296 acatcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaatacaatataatcatcac 20912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 15238161 - 15238076
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  15238161 acatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 15238076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 22108493 - 22108409
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  22108493 acatcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatagaatcatca 22108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 40727443 - 40727358
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    ||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  40727443 acatcatcaagtacaccaaacaacttatagatatcttcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 40727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 22120634 - 22120551
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  22120634 catcatcaagtacatttaacaactcatagataacatcatataatcatcatcactaataaatt--aaataacacaatataatcatca 22120551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 18355055 - 18355108
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18355055 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 18355108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 24768290 - 24768237
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24768290 tcatcttcttatattaatataacaacaacgtattcatcatcttataaagtataa 24768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 19473905 - 19473845
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19473905 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 19473845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 20294786 - 20294846
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20294786 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 20294846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11219590 - 11219662
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11219590 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11219662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11224176 - 11224248
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11224176 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11224248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11226192 - 11226264
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11226192 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11227998 - 11228070
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11227998 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11229988 - 11230060
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11229988 acatcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11230060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 10751852 - 10751903
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  10751852 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 10751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 19510498 - 19510550
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  19510498 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 19510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 22339048 - 22339100
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  22339048 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 22339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 23113445 - 23113393
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  23113445 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 23113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 28372124 - 28372072
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  28372124 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 28372072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 37600051 - 37599999
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  37600051 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 37599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 38146461 - 38146409
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  38146461 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 38146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 11226427 - 11226478
Alignment:
Q  288 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  11226427 tataataatataacaacaacatattcatcatcttatcaaaatataatcaaca 11226478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 41878693 - 41878642
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  41878693 atcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 41878642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 20912144 - 20912104
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatc 319  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  20912144 tcatcttcttatattaatataacaacaatatattcatcatc 20912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 22108236 - 22108196
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  22108236 ttataataatataacaacaacatattcatcatcttataaaa 22108196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 22335518 - 22335570
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||| |||| ||||||||||||||||| |||||  |||||||||||||    
T  22335518 catcatcaaatacatttaacaactcatagataacatcacataatcatcatcac 22335570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 22749197 - 22749249
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||| ||||||||||| |||||  |||||||||||||    
T  22749197 catcatcaagtacatttaaccactcatagataacatcacataatcatcatcac 22749249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 9774975 - 9775014
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcat 48  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  9774975 acatcatcaagtacatttaacaactcatagataacatcat 9775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 5889863 - 5889817
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  5889863 tcatcatcttataataatataacaacatcatattcatcatcttataa 5889817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 22120381 - 22120335
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttata-aaatataa 332  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  22120381 ttataataatataacaacaacatattcatcatcttatagaaatataa 22120335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 36459584 - 36459626
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||    
T  36459584 catcattaagtacatttaacaactcatagataacatcatgtaa 36459626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11219849 - 11219912
Alignment:
Q  279 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| |||||||||||||||    
T  11219849 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaaca 11219912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11224435 - 11224498
Alignment:
Q  279 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| |||||||||||||||    
T  11224435 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaaca 11224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11228257 - 11228320
Alignment:
Q  279 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| |||||||||||||||    
T  11228257 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaaca 11228320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11230247 - 11230310
Alignment:
Q  279 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| |||||||||||||||    
T  11230247 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaaca 11230310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 39362978 - 39363027
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 59  Q
    |||||||||  | ||||||||||||||||| | |||||||||||||||||    
T  39362978 catcatcaatcatacttaacaactcatagacaacatcatgtaatcatcat 39363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 325
Target Start/End: Complemental strand, 5889918 - 5889886
Alignment:
Q  293 taatataacaacaacgtattcatcatcttataa 325  Q
    ||||||||||||||| |||||||||||||||||    
T  5889918 taatataacaacaacatattcatcatcttataa 5889886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 18355179 - 18355219
Alignment:
Q  299 aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  18355179 aacaacaacatattcatcatcttataaaaatataatcaaca 18355219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 20912176 - 20912132
Alignment:
Q  280 catcttcttatattaatataacaacaacgtattcatcatcttata 324  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||    
T  20912176 catcatcttataataatataacaacaacatattcatcttcttata 20912132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 338
Target Start/End: Complemental strand, 40727122 - 40727082
Alignment:
Q  299 aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  40727122 aacaacaacatattcatcatcttataaaaatataatcaaca 40727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 9555104 - 9555189
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555104 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 9555189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 14759035 - 14758950
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14759035 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 14955803 - 14955718
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955803 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14955718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 17807089 - 17807174
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807089 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 17807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 25688477 - 25688562
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688477 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 25688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 4562817 - 4562732
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4562817 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatcatc 4562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 5758499 - 5758414
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5758499 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatagaatcatc 5758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 33740871 - 33740956
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33740871 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatcatc 33740956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 20158490 - 20158408
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20158490 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 20163942 - 20163859
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20163942 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 12486306 - 12486388
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  12486306 acatcatcaagtacacttaacaactcatagatatcatcatgta---atcatcactaataactttaaaacaacacaatataatcatc 12486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 20161167 - 20161084
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20161167 acattatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 23997009 - 23996925
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23997009 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcac 23996925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 10711861 - 10711943
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10711861 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 10925631 - 10925713
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10925631 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 17052488 - 17052405
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  17052488 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 17052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 12422980 - 12423062
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12422980 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 12423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 631790 - 631706
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  631790 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 631706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 22634969 - 22634885
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  22634969 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatatgatcatcac 22634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 27532788 - 27532872
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27532788 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 27532872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 4562506 - 4562446
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4562506 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 4562446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 9555415 - 9555475
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9555415 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 9555475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 14758647 - 14758587
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14758647 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 14758587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 14955412 - 14955352
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14955412 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 14955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 25688788 - 25688848
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25688788 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 25688848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 33741185 - 33741245
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33741185 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 33741245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 13813875 - 13813820
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 65  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13813875 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 13818363 - 13818308
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 65  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13818363 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 5758031 - 5757971
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  5758031 tcatcttcttgtattaatataacaacaacatattcatcatcttatgaaaatataatcaaca 5757971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 24048427 - 24048375
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24048427 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 15223581 - 15223632
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  15223581 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 15223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 27532942 - 27532995
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  27532942 tcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa 27532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 15533255 - 15533307
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  15533255 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 15533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 18211640 - 18211692
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  18211640 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 49549125 - 49549073
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  49549125 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 49549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 15189737 - 15189783
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15189737 tcatcatcttataataatataacaacaacatattcatcatcttataa 15189783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 15189770 - 15189816
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15189770 tcatcatcttataataatataacaacaacatattcatcatcttataa 15189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 30145819 - 30145872
Alignment:
Q  10 catcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  30145819 catcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 30145872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 15223912 - 15223948
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15223912 ttataataatataacaacaacgtattcatcatcttat 15223948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 36036988 - 36037040
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  36036988 catcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 36037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 631636 - 631590
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||||| ||||| ||||||||||||||| |||||||||| ||||||    
T  631636 tcatctttttataataatataacaacaacatattcatcattttataa 631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 12423189 - 12423234
Alignment:
Q  280 catcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    |||| ||||||| ||||||||||||||| |||||||||| ||||||    
T  12423189 catcgtcttataataatataacaacaacatattcatcattttataa 12423234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 12486537 - 12486600
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  12486537 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 12486600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 15482039 - 15481998
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  15482039 tcatcatcttataataatataacaacaacatattcatcatct 15481998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 19857007 - 19857048
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  19857007 tcatcatcttataataatataacaacaacatattcatcatct 19857048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 4e-41; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 7108273 - 7108358
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108273 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 7112208 - 7112293
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112208 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 11068648 - 11068733
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068648 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11068733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22320164 - 22320249
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320164 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22320249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 22335219 - 22335304
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335219 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 55021411 - 55021496
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021411 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 55021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 11167137 - 11167052
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11167137 acatcatcaagtaaacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 14497982 - 14498067
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14497982 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 14498067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 28948496 - 28948581
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28948496 acatcatcaagtacacttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 28948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 5219882 - 5219965
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5219882 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 11853741 - 11853824
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11853741 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 37440723 - 37440641
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37440723 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 15616212 - 15616297
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616212 acatcttcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatcatc 15616297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 11301709 - 11301626
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  11301709 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 14664460 - 14664543
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14664460 acatcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 14667624 - 14667707
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14667624 acatcatcaagtacacttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 16795539 - 16795622
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  16795539 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 16795622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 12853406 - 12853325
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 93  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12853406 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 18933398 - 18933337
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18933398 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 18933337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 30064421 - 30064482
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30064421 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 30064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 4590203 - 4590119
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  4590203 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcgtcac 4590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 14670062 - 14670142
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||   |||||||||||||||||  ||||||||||||||||||||||    
T  14670062 catcatcaagtacatttaacaactcatagataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatca 14670142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 14068105 - 14068021
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    ||||||||| |||| ||| |||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  14068105 catcatcaaatacatttagcaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 14068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 17318552 - 17318468
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| | ||||||| |||||||||||||||||||  |||| ||||||||||||||||||    
T  17318552 catcatcaagtacatttaacaactcctagataacttcatgtattcatcatcactaataactt--aaactacacaatataatcatcac 17318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 15463916 - 15463999
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  15463916 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 15463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 7108584 - 7108644
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7108584 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 7108644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 7112519 - 7112579
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7112519 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 7112579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11069036 - 11069096
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11069036 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11069096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 11301437 - 11301389
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301437 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 11301389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 12337291 - 12337348
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 68  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12337291 acatcatcaagtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 14498293 - 14498353
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14498293 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 14498353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 15616523 - 15616583
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15616523 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 15616583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 22320552 - 22320612
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22320552 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22320612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 22335607 - 22335667
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22335607 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 22335667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 28948730 - 28948790
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28948730 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 28948790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 30064735 - 30064795
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30064735 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 30064795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 55021873 - 55021933
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55021873 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 55021933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 11166749 - 11166689
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11166749 tcatcctcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11166689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 14664735 - 14664783
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14664735 tcatcttcttatattaatataacaaaaacgtattcatcatcttataaaa 14664783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 14667899 - 14667947
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14667899 tcatcttcttatattaatataacaacaacatattcatcatcttataaaa 14667947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 4112649 - 4112607
Alignment:
Q  52 atcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatcatc 4112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 4108800 - 4108759
Alignment:
Q  52 atcatcatcactaataactttaaaacaacacaatataatcat 93  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatcat 4108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 10834984 - 10834935
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 59  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10834984 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 10834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 14681586 - 14681664
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||  ||||| |||||||||   |||||||||||||||||  ||||||||||||||||||||||    
T  14681586 catcatcaagtacatttaacaactc--agataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatca 14681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 13435854 - 13435906
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  13435854 catcatcaagtacatttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 14067747 - 14067687
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttata-aaatataatcaaca 338  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  14067747 tcatcatcttataaaaatataacaacaacgtattcatcatcttatataaatataatcaaca 14067687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 16751945 - 16751895
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 59  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  16751945 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcat 16751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 8928907 - 8928858
Alignment:
Q  13 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  8928907 catcaagtacatttaacaactcatagataacatcatgcaatcatcatcac 8928858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 15963532 - 15963604
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||| |||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  15963532 acatcatcaagtacacttaataactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 15963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 15967456 - 15967528
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||| |||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  15967456 acatcatcaagtacacttaataactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 15967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 15971380 - 15971452
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||| |||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  15971380 acatcatcaagtacacttaataactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 15971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 3802006 - 3802058
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  3802006 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 3802058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 4589936 - 4589893
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat 323  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  4589936 tcatcttcttatatta-tataacaacaacgtattcatcatcttat 4589893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 14764838 - 14764786
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  14764838 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 14764786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 20249892 - 20249840
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  20249892 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 20249840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 29545981 - 29545929
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  29545981 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 29545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 54519633 - 54519685
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  54519633 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 54519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 18899489 - 18899540
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatca 61  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||||||    
T  18899489 catcatcaagtacatttaacaactcatagataacatcacataatcatcatca 18899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 11912463 - 11912505
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  11912463 catcatcaagtacatttaacaactcatagataacatcatgtaa 11912505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 14067777 - 14067732
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||    
T  14067777 tcatcttcttatattaata---caacaacgtattcatcatcttataaaa 14067732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 18440629 - 18440583
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  18440629 tcatcatcttataataatataacaacaacatattcatcatcttataa 18440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 19485703 - 19485657
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  19485703 tcatcatcttataataatataacaacaacatattcatcatcttataa 19485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 49390374 - 49390328
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  49390374 tcatcatcttataataatataacaacaacatattcatcatcttataa 49390328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 4108833 - 4108793
Alignment:
Q  9 acatcatcaagtacactt-aacaactcatagatatcatcat 48  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  4108833 acatcatcaagtacactttaacaactcatagatatcatcat 4108793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 4112682 - 4112642
Alignment:
Q  9 acatcatcaagtacactt-aacaactcatagatatcatcat 48  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  4112682 acatcatcaagtacactttaacaactcatagatatcatcat 4112642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 9532294 - 9532346
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  9532294 catcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 9532346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 12304210 - 12304262
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  12304210 catcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 12304262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 16751616 - 16751580
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16751616 ttataataatataacaacaacgtattcatcatcttat 16751580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 19774548 - 19774584
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19774548 ttataataatataacaacaacgtattcatcatcttat 19774584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 8491775 - 8491732
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||||| |||||||||| |||||| |||||||||||    
T  8491775 catcatcaagtacatttaacaactcctagataacatcatgtaat 8491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 19774233 - 19774284
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| ||||||||||| ||| |  |||||||||||||||||    
T  19774233 acatcatcaagtacatttaacaactcacagacaatatcatgtaatcatcatc 19774284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 23372585 - 23372534
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||| ||||||||||||| ||| |||||  |||||||||||||    
T  23372585 atcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 23372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 51299570 - 51299621
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||| ||||||||||||| ||| |||||  |||||||||||||    
T  51299570 atcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 51299621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 18440551 - 18440505
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||    
T  18440551 tcatcatcttataataatatagcaacaacatattcatcatcttataa 18440505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 19485625 - 19485579
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||    
T  19485625 tcatcatcttataataatatagcaacaacatattcatcatcttataa 19485579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 15963791 - 15963854
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  15963791 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 15963854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 15967715 - 15967778
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  15967715 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 15967778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 15971639 - 15971702
Alignment:
Q  279 tcatcttcttatattaatat---aacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| ||||||   ||||||||| ||||||||||||||| |||||||||||||||    
T  15971639 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 15971702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 8490395 - 8490350
Alignment:
Q  49 gtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    ||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  8490395 gtaatcaccatcactaataactt--aaactacacaatataatcatcac 8490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 23173334 - 23173386
Alignment:
Q  11 atcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 62  Q
    ||||||||||| | ||||||||||||||  || ||||||||||||||||||||    
T  23173334 atcatcaagtatatttaacaactcatagcttaacatcatgtaatcatcatcac 23173386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 27410987 - 27410959
Alignment:
Q  279 tcatcttcttatattaatataacaacaac 307  Q
    |||||||||||||||||||||||||||||    
T  27410987 tcatcttcttatattaatataacaacaac 27410959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 24630091 - 24630006
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630091 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24630006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 24645186 - 24645271
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645186 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24645271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 24647962 - 24648047
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24647962 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 27600406 - 27600491
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600406 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 27600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 30346701 - 30346616
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346701 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 30346616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 10103340 - 10103255
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10103340 acatcatcaagtacacttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 10103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 12902650 - 12902565
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12902650 acatcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 27381037 - 27380952
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27381037 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27380952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 27385007 - 27384922
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27385007 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 31343952 - 31344035
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31343952 acatcatcaagtacacctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 9784030 - 9784113
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  9784030 catcatcaagtacattaaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataattatca 9784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 10103029 - 10102969
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10103029 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 10102969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 24629700 - 24629640
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24629700 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 24629640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 27600717 - 27600777
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27600717 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 27600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 30346236 - 30346176
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30346236 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 30346176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 31344221 - 31344274
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  31344221 tcatcttcttgtattaatataacaataacgtattcatcatcttataaaatataa 31344274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 27384619 - 27384559
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27384619 tcatcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaaca 27384559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 27380571 - 27380513
Alignment:
Q  281 atcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27380571 atcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaaca 27380513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 41532486 - 41532414
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  41532486 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 41532414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 24647129 - 24647166
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatc 46  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24647129 acatcatcaagtacacttaacaactcatagatatcatc 24647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 6481820 - 6481872
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  6481820 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 6481872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 6485287 - 6485339
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  6485287 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 6485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 19663600 - 19663548
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  19663600 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 19663548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 20260293 - 20260345
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  20260293 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 20260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 21074550 - 21074498
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| ||||||||  ||||||||||    
T  21074550 catcatcaagtacatttaacaactcatagataacatcatgttgtcatcatcac 21074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 9240710 - 9240759
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 59  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||||    
T  9240710 catcatcaagtacatttaacaactcatagataacatcacataatcatcat 9240759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 41532227 - 41532164
Alignment:
Q  279 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| |||||||||||||||    
T  41532227 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 41532164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 1009297 - 1009382
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009297 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 1926839 - 1926754
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926839 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1926754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 16376859 - 16376774
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376859 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16376774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 20925853 - 20925768
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925853 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20925768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 52634303 - 52634388
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634303 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 52634388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 33796068 - 33796151
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33796068 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 22132141 - 22132058
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22132141 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 22132058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 21406289 - 21406373
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  21406289 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21406373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 41801321 - 41801238
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  41801321 catcatcaagtacatttaacaactcatagataatatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 41801238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 20230181 - 20230120
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20230181 catcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 20230120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 33796291 - 33796344
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796291 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 33796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 1009608 - 1009668
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1009608 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 1009668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 1926374 - 1926314
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1926374 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 1926314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 16376625 - 16376565
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16376625 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 16376565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 20925388 - 20925328
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20925388 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 20925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 52634694 - 52634754
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52634694 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 52634754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 21406553 - 21406608
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataat 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21406553 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataat 21406608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 20229995 - 20229941
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20229995 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 20229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 39245214 - 39245163
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  39245214 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 39245163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 39248769 - 39248718
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  39248769 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 39248718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 41389708 - 41389657
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 60  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  41389708 acatcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 41389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 16370961 - 16371013
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  16370961 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 16371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 28195153 - 28195107
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  28195153 tcatcatcttataataatataacaacaacatattcatcatcttataa 28195107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 35982386 - 35982340
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  35982386 tcatcatcttataataatataacaacaacatattcatcatcttataa 35982340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 21740525 - 21740484
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  21740525 tcatcatcttataataatataacaacaacgtattcatcatct 21740484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 12271028 - 12271088
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 338  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  12271028 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 12271088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 33796436 - 33796488
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    ||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  33796436 ttataataatataacaacaacatatacatcatcttataaaaatataatcaaca 33796488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 39244927 - 39244891
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39244927 ttataataatataacaacaacgtattcatcatcttat 39244891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 39248482 - 39248446
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39248482 ttataataatataacaacaacgtattcatcatcttat 39248446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 41389375 - 41389339
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttat 323  Q
    ||||| |||||||||||||||||||||||||||||||    
T  41389375 ttataataatataacaacaacgtattcatcatcttat 41389339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 41801139 - 41801091
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  41801139 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 41801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 11809990 - 11809949
Alignment:
Q  12 tcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  11809990 tcatcaagtacatttaacaactcataggtaacatcatgtaat 11809949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 20315609 - 20315650
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  20315609 tcatcatcttataataatataacaacaacatattcatcatct 20315650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 41306283 - 41306242
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  41306283 tcatcatcttataataatataacaacaacatattcatcatct 41306242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 21740389 - 21740349
Alignment:
Q  285 tcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  21740389 tcttataataatataacaacaacatattcatcatctcataa 21740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 41801171 - 41801124
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||||    
T  41801171 tcatcatcttataataatatatcaacaac-tattcatcatcttataaaa 41801124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 6364 - 6279
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6364 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 6239 - 6180
Alignment:
Q  280 catcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6239 catcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 6180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 68595 - 68514
Alignment:
Q  13 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68595 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 68514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 338
Target Start/End: Complemental strand, 68392 - 68341
Alignment:
Q  288 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||| ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  68392 tataataatataacaacaacatattcatcatcttatgaaaatataatcaaca 68341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 60369 - 60283
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataac-tttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  60369 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatcatc 60283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 11086 - 11170
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11086 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaa-ataatcatc 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 11402 - 11462
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11402 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaaca 11462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 864 - 781
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  864 acatcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 14879 - 14962
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14879 acatcatcaagtacacttaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 11103 - 11027
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 85  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11103 acatcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 11027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 10787 - 10734
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10787 tcatcttcttatattaatataacaacaacgtattcatcatcttataaagtataa 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 8612 - 8695
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  8612 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaaaaacactatgtaatca 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 8885 - 8933
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  8885 tcatctttttatattaatataacaaaaacgtattcatcattttataaaa 8933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 34171 - 34089
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  34171 acatcatcaagtacacttaacaactcatagatatcatcatgtaatc---atcactaataactttaaaacaacacaatataatcatc 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 33940 - 33877
Alignment:
Q  279 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| |||||||||||||||    
T  33940 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 33877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 11813 - 11895
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11813 catcatcaagtacacttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 21382 - 21298
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21382 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 21298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 21210 - 21162
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  21210 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 21162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 7003 - 6920
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7003 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 6920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 6889 - 6842
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||||    
T  6889 tcatcatcttataataatatatcaacaac-tattcatcatcttataaaa 6842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 25610 - 25526
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  25610 catcatcaagtacatttaacaactcatagataacatcatgtattcatcatcactaataactt--aaacaacacaatataatcatcac 25526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 25491 - 25446
Alignment:
Q  280 catcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    |||| ||||||| ||||||||||||||| ||||||||||| |||||    
T  25491 catcatcttatagtaatataacaacaacatattcatcatcatataa 25446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 4010 - 4094
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  4010 catcatcaagtacatttaacaactcctagataacatcatgtaatcataatcactaataactt--aaactacacaatataatcatcac 4094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 955 - 1009
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  955 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 1 - 42
Alignment:
Q  53 tcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||||||||  |||| ||||||||||||||||||    
T  1 tcatcatcactaataactt--aaactacacaatataatcatcac 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 8782 - 8699
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  8782 catcatcatgtacatttaacaactcgtagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Complemental strand, 8500 - 8467
Alignment:
Q  294 aatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||| |||||||||||||||||||    
T  8500 aatataacaacaacatattcatcatcttataaaa 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 74374 - 74291
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||  ||||||||| ||||||||||||    
T  74374 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcttcactaataaatt--aaacaacaccatataatcatca 74291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 332
Target Start/End: Complemental strand, 74117 - 74077
Alignment:
Q  293 taatataacaacaacgtattcatcatcttata-aaatataa 332  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  74117 taatataacaacaacatattcatcatcttatagaaatataa 74077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 18859 - 18942
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||| ||||||| |||||  ||||||||||||||||||||  | ||||||||||||||||||||||    
T  18859 catcatcaagtacatttaacaacttatagataacatcacataatcatcatcactaataac--tgaaacaacacaatataatcatca 18942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 19128 - 19176
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19128 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 19176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 19232 - 19280
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19232 tcatcttcttatattaatctaacaacaacgtattcatcatcttataaaa 19280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 37240 - 37179
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  37240 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 37179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 5)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 62882 - 62821
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 71  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  62882 catcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 62821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 79428 - 79481
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 332  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  79428 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 79481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 62621 - 62568
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  62621 tcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataa 62568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 66537 - 66484
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  66537 tcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataa 66484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 79475 - 79520
Alignment:
Q  294 aatataacaacaacgtattcatcatcttata-aaatataatcaaca 338  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||    
T  79475 aatataacaacaacgtattcatcatcttacataaatataatcaaca 79520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 5860 - 5917
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 68  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5860 acatcatcaagtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 5917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 49; Significance: 5e-19; HSPs: 4)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 11061 - 11109
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 327  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11061 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 11109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 10834 - 10874
Alignment:
Q  52 atcatcatcactaataactttaaaacaacacaatataatca 92  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  10834 atcatcatcactaataactttaaaacaacacaatgtaatca 10874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 10803 - 10841
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcat 48  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  10803 catcatcaagtacacttaacaactcttagatatcatcat 10841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 11094 - 11148
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 332  Q
    ||||| |||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  11094 tcatcatcttataaaaatataacaacaatgtattcatcatcttatgaaaatataa 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 37245 - 37161
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac-taataactttaaaacaacacaatataatcatca 95  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||||  | || |||||||||||||||||    
T  37245 catcatcaagtacatttaacaactcatagataacatcatgtaatcatcatctcataataactt--agaccacacaatataatcatca 37161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 5574 - 5489
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||||||||||||||| ||| |||||||| ||||| |||| ||||||||||||||||||||||    || ||||||||||||||||||    
T  5574 acatcatcaagtacacctaagaactcataaatatcttcatataatcatcatcactaataactt--ggactacacaatataatcatcac 5489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 5079 - 5019
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaaca 338  Q
    ||||||| || |||||||||||||||||| ||||||||||||||| |||| ||||||||||    
T  5079 tcatctttttgtattaatataacaacaacatattcatcatcttatgaaaacataatcaaca 5019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 28509 - 28560
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28509 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 28560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 33974 - 34025
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33974 atcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 34025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 15618 - 15546
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 92  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| ||||||    
T  15618 acatcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatgtaatca 15546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 15359 - 15296
Alignment:
Q  279 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaaca 338  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| |||||||||||||||    
T  15359 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaaca 15296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 236 - 288
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  236 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 5278 - 5330
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  5278 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 5330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 10864 - 10812
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  10864 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 10812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 109637 - 109689
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  109637 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 109689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 224185 - 224133
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  224185 catcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 224133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 4157 - 4199
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaa 52  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  4157 catcatcaagtacatttaacaactcatagataacatcatgtaa 4199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 691 - 753
Alignment:
Q  33 tcatagatatcatcatgtaatcatca-tcactaataactttaaaacaacacaatataatcatcac 96  Q
    |||| |||| ||||||||||||| || |||||||||||||  |||||||||||||||||||||||    
T  691 tcatggataacatcatgtaatcaccaatcactaataactt--aaacaacacaatataatcatcac 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 3558 - 3507
Alignment:
Q  11 atcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||| ||||||||||||| ||| |||||  |||||||||||||    
T  3558 atcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 3507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 23980 - 23937
Alignment:
Q  10 catcatcaagtacacttaacaactcatagatatcatcatgtaat 53  Q
    |||||||||||||| |||||||||| |||||| |||||||||||    
T  23980 catcatcaagtacatttaacaactcctagataacatcatgtaat 23937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 70790 - 70821
Alignment:
Q  9 acatcatcaagtacacttaacaactcatagat 40  Q
    ||||||||||||||||||||||||||||||||    
T  70790 acatcatcaagtacacttaacaactcatagat 70821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 8593 - 8555
Alignment:
Q  287 ttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  8593 ttataataatataacaacaacatattcatcatcttataa 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 8667 - 8621
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||| |||| || ||||||||||||||| |||||||||||||||||    
T  8667 tcatcatcttctaataatataacaacaacatattcatcatcttataa 8621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 6963 - 7004
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  6963 tcatcatcttataataatataacaacaacatattcatcatct 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 44480 - 44439
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  44480 tcatcatcttataataatataacaacaacatattcatcatct 44439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 44545 - 44504
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  44545 tcatcatcttataataatataacaacaacatattcatcatct 44504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 9072 - 9113
Alignment:
Q  279 tcatcttcttatattaatataacaacaacgtattcatcatct 320  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  9072 tcatcatcttataataatataacaacaacatattcatcatct 9113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 153840 - 153803
Alignment:
Q  25 ttaacaactcatagatatcatcatgtaatcatcatcac 62  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  153840 ttaacaactcatagatgacatcatgtaatcatcatcac 153803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 362226 - 362266
Alignment:
Q  285 tcttatattaatataacaacaacgtattcatcatcttataa 325  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  362226 tcttataataatataacaacaacatattcatcatctcataa 362266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University