View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6846_low_8 (Length: 244)
Name: NF6846_low_8
Description: NF6846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6846_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5318003 - 5318237
Alignment:
| Q |
1 |
taaatcatcaaataatgtgcaaattttagtccactgtgtagcgaaataaaattaaacttgatacaggtcaccatcactcaattatggtcaaagtggagga |
100 |
Q |
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| T |
5318003 |
taaatcatcaaataatgtgcaaattttagtccactgtgtagcgaaataaaattaaacttgatacaggtcaccatcactcaattatggtcaaagtggagga |
5318102 |
T |
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| Q |
101 |
tatgatatctacatcttcatttacttatttacatgacaaataatgacaccaggaaactttacaatcagagtggaactaagcagctgtacaaattattcgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
5318103 |
tatgatatctacatcttcatttacttatttacatgacaaataatgacaccaggaaactttacaatcagagtggaacaaagcagctgtacaaattattcgc |
5318202 |
T |
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| Q |
201 |
ggtccattggttcttttcctttatgttgatgtcca |
235 |
Q |
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| T |
5318203 |
ggtccattggttcttttcctttatgttgatgtcca |
5318237 |
T |
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