View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6849_high_3 (Length: 408)

Name: NF6849_high_3
Description: NF6849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6849_high_3
NF6849_high_3
[»] chr8 (36 HSPs)
chr8 (1-245)||(22272330-22272575)
chr8 (29-197)||(41825577-41825745)
chr8 (29-241)||(8609721-8609931)
chr8 (29-198)||(41042517-41042686)
chr8 (29-238)||(42941777-42941985)
chr8 (29-203)||(7745045-7745219)
chr8 (29-183)||(13486032-13486186)
chr8 (29-186)||(9673098-9673255)
chr8 (51-238)||(26242269-26242455)
chr8 (29-186)||(38547282-38547438)
chr8 (29-240)||(5036446-5036660)
chr8 (29-186)||(13108270-13108426)
chr8 (29-174)||(40339613-40339758)
chr8 (63-241)||(13282478-13282654)
chr8 (29-243)||(27691152-27691365)
chr8 (29-244)||(33708737-33708950)
chr8 (237-302)||(22270877-22270942)
chr8 (103-162)||(15145749-15145808)
chr8 (90-174)||(15305863-15305947)
chr8 (90-174)||(15486232-15486316)
chr8 (123-241)||(26238726-26238843)
chr8 (64-184)||(33750332-33750452)
chr8 (151-241)||(42943426-42943515)
chr8 (35-174)||(9184449-9184588)
chr8 (29-184)||(37525936-37526091)
chr8 (82-165)||(44526694-44526777)
chr8 (37-170)||(11722730-11722863)
chr8 (31-156)||(11788405-11788530)
chr8 (29-174)||(42897687-42897832)
chr8 (151-241)||(5038062-5038150)
chr8 (151-241)||(22273891-22273980)
chr8 (105-184)||(462359-462438)
chr8 (90-164)||(27406891-27406965)
chr8 (31-173)||(38882712-38882854)
chr8 (151-238)||(9671980-9672066)
chr8 (125-166)||(44528149-44528190)
[»] chr3 (36 HSPs)
chr3 (29-241)||(23293103-23293314)
chr3 (29-241)||(27899014-27899225)
chr3 (29-241)||(21348723-21348934)
chr3 (29-241)||(46112487-46112698)
chr3 (29-241)||(53190693-53190903)
chr3 (29-185)||(42279562-42279718)
chr3 (29-185)||(43765192-43765348)
chr3 (29-242)||(30599851-30600063)
chr3 (29-241)||(51684610-51684821)
chr3 (29-203)||(48830739-48830912)
chr3 (29-186)||(17515364-17515521)
chr3 (29-166)||(44276129-44276266)
chr3 (29-241)||(2226086-2226296)
chr3 (29-241)||(54898437-54898647)
chr3 (29-200)||(35905646-35905816)
chr3 (29-241)||(41977750-41977960)
chr3 (29-200)||(46197760-46197931)
chr3 (29-186)||(2377083-2377240)
chr3 (29-144)||(600805-600920)
chr3 (29-186)||(19987530-19987684)
chr3 (29-186)||(3152151-3152308)
chr3 (29-162)||(7884807-7884939)
chr3 (29-186)||(44794261-44794418)
chr3 (29-186)||(2660266-2660423)
chr3 (105-162)||(54092764-54092821)
chr3 (52-168)||(5133068-5133184)
chr3 (31-157)||(5125884-5126010)
chr3 (123-241)||(30598337-30598454)
chr3 (151-238)||(42282473-42282559)
chr3 (124-184)||(23774208-23774268)
chr3 (151-198)||(46114105-46114152)
chr3 (121-200)||(54412517-54412596)
chr3 (58-184)||(40508853-40508979)
chr3 (103-157)||(41623735-41623789)
chr3 (116-165)||(23888772-23888821)
chr3 (211-248)||(41979411-41979448)
[»] chr5 (25 HSPs)
chr5 (29-241)||(8539675-8539886)
chr5 (29-241)||(34327635-34327846)
chr5 (28-242)||(36057525-36057738)
chr5 (29-184)||(30468193-30468348)
chr5 (29-241)||(17574318-17574528)
chr5 (29-245)||(7267839-7268053)
chr5 (29-241)||(2179787-2179998)
chr5 (29-238)||(18624921-18625129)
chr5 (29-186)||(24541124-24541282)
chr5 (29-136)||(28819391-28819498)
chr5 (29-241)||(2854241-2854450)
chr5 (90-186)||(29621755-29621851)
chr5 (151-241)||(30463900-30463989)
chr5 (90-186)||(40780604-40780700)
chr5 (29-73)||(12737305-12737349)
chr5 (29-73)||(12800128-12800172)
chr5 (151-198)||(28813765-28813812)
chr5 (63-184)||(18728549-18728670)
chr5 (149-186)||(43492131-43492168)
chr5 (151-241)||(12738736-12738825)
chr5 (151-241)||(12801559-12801648)
chr5 (105-184)||(32087570-32087649)
chr5 (90-164)||(42473581-42473655)
chr5 (31-200)||(24496783-24496952)
chr5 (109-169)||(15459182-15459242)
[»] chr2 (31 HSPs)
chr2 (29-241)||(19908179-19908391)
chr2 (29-203)||(40560260-40560434)
chr2 (29-237)||(42519138-42519346)
chr2 (29-241)||(39664681-39664892)
chr2 (29-241)||(16763076-16763286)
chr2 (29-186)||(44709678-44709835)
chr2 (36-241)||(2766934-2767138)
chr2 (29-241)||(14389017-14389228)
chr2 (29-174)||(17696272-17696417)
chr2 (29-186)||(6797561-6797718)
chr2 (29-186)||(39455223-39455380)
chr2 (73-200)||(16377174-16377301)
chr2 (31-203)||(37645524-37645696)
chr2 (90-200)||(37020548-37020658)
chr2 (35-162)||(62738-62866)
chr2 (90-174)||(6785975-6786059)
chr2 (29-184)||(7744099-7744254)
chr2 (29-184)||(17946150-17946305)
chr2 (29-159)||(40097629-40097759)
chr2 (134-241)||(19581414-19581520)
chr2 (26-145)||(361540-361659)
chr2 (115-174)||(24208061-24208120)
chr2 (100-165)||(15807903-15807968)
chr2 (100-165)||(32608051-32608116)
chr2 (106-162)||(4416947-4417003)
chr2 (64-184)||(29909608-29909728)
chr2 (31-158)||(862227-862354)
chr2 (31-86)||(10716818-10716873)
chr2 (111-157)||(13999890-13999936)
chr2 (150-203)||(37646477-37646530)
chr2 (125-165)||(15806187-15806227)
[»] chr4 (20 HSPs)
chr4 (29-198)||(42980677-42980846)
chr4 (29-184)||(41761659-41761814)
chr4 (29-242)||(48813786-48813998)
chr4 (29-250)||(41781530-41781750)
chr4 (29-197)||(35404358-35404526)
chr4 (29-187)||(51011979-51012136)
chr4 (29-197)||(48646660-48646828)
chr4 (29-186)||(49523178-49523335)
chr4 (29-238)||(11601674-11601881)
chr4 (29-184)||(2693166-2693320)
chr4 (29-242)||(43519423-43519635)
chr4 (58-184)||(52868091-52868217)
chr4 (31-162)||(26296809-26296940)
chr4 (29-103)||(11255853-11255927)
chr4 (29-162)||(27382195-27382328)
chr4 (29-162)||(50131240-50131373)
chr4 (159-241)||(48645255-48645336)
chr4 (103-162)||(44972489-44972548)
chr4 (106-164)||(13450970-13451028)
chr4 (151-187)||(20493880-20493916)
[»] chr7 (33 HSPs)
chr7 (29-241)||(39859142-39859353)
chr7 (29-200)||(45359376-45359547)
chr7 (29-199)||(35693283-35693455)
chr7 (29-198)||(13168162-13168334)
chr7 (29-241)||(47386122-47386333)
chr7 (29-186)||(6602389-6602546)
chr7 (29-184)||(48852260-48852415)
chr7 (37-186)||(24228330-24228479)
chr7 (29-184)||(30940338-30940493)
chr7 (30-200)||(38474057-38474227)
chr7 (29-186)||(34776828-34776985)
chr7 (82-241)||(37115492-37115650)
chr7 (29-241)||(29996427-29996638)
chr7 (38-184)||(37796103-37796249)
chr7 (29-241)||(27665978-27666189)
chr7 (38-186)||(56384-56532)
chr7 (29-162)||(23906174-23906307)
chr7 (29-132)||(46439443-46439546)
chr7 (30-184)||(33038711-33038865)
chr7 (151-241)||(13169683-13169772)
chr7 (90-186)||(20478096-20478192)
chr7 (29-184)||(1546343-1546498)
chr7 (31-162)||(6056844-6056975)
chr7 (31-162)||(31913547-31913678)
chr7 (121-200)||(48227911-48227990)
chr7 (125-162)||(31915047-31915084)
chr7 (151-238)||(39857648-39857734)
chr7 (31-80)||(48704340-48704389)
chr7 (103-167)||(23962377-23962441)
chr7 (34-145)||(11682876-11682987)
chr7 (151-200)||(6605397-6605446)
chr7 (31-184)||(46996617-46996770)
chr7 (117-173)||(13018102-13018158)
[»] chr6 (19 HSPs)
chr6 (29-203)||(10568436-10568610)
chr6 (29-200)||(20523406-20523577)
chr6 (29-186)||(9398714-9398871)
chr6 (29-240)||(11355223-11355433)
chr6 (29-241)||(6899485-6899696)
chr6 (29-162)||(7049835-7049968)
chr6 (36-200)||(32439012-32439175)
chr6 (29-241)||(32516877-32517088)
chr6 (29-241)||(13613495-13613706)
chr6 (85-200)||(7372927-7373042)
chr6 (31-184)||(14338390-14338543)
chr6 (31-166)||(30891198-30891333)
chr6 (31-161)||(25172024-25172154)
chr6 (90-186)||(3456802-3456898)
chr6 (151-241)||(9400035-9400124)
chr6 (26-113)||(31208988-31209075)
chr6 (100-165)||(11163875-11163940)
chr6 (64-184)||(3018380-3018500)
chr6 (90-186)||(32455865-32455961)
[»] chr1 (29 HSPs)
chr1 (29-241)||(2869579-2869790)
chr1 (29-241)||(3013383-3013600)
chr1 (30-241)||(27087283-27087492)
chr1 (29-243)||(37344340-37344553)
chr1 (29-241)||(25278281-25278492)
chr1 (29-241)||(31238408-31238619)
chr1 (29-174)||(6818591-6818736)
chr1 (29-203)||(50556010-50556184)
chr1 (29-241)||(4855880-4856090)
chr1 (29-186)||(15104495-15104652)
chr1 (82-203)||(51896118-51896239)
chr1 (29-241)||(34778052-34778262)
chr1 (29-241)||(46583469-46583680)
chr1 (29-238)||(33602557-33602765)
chr1 (29-238)||(52643533-52643736)
chr1 (29-184)||(51121961-51122116)
chr1 (31-157)||(43868697-43868823)
chr1 (138-241)||(25278975-25279077)
chr1 (151-241)||(31236819-31236908)
chr1 (90-186)||(47013056-47013152)
chr1 (90-184)||(9121642-9121736)
chr1 (160-241)||(25278854-25278934)
chr1 (121-241)||(26223587-26223706)
chr1 (151-200)||(51894607-51894656)
chr1 (29-121)||(26225467-26225558)
chr1 (64-184)||(36895458-36895578)
chr1 (211-245)||(37346021-37346055)
chr1 (90-167)||(1442594-1442671)
chr1 (151-238)||(3011858-3011944)
[»] scaffold1454 (1 HSPs)
scaffold1454 (29-174)||(1329-1473)
[»] scaffold0564 (1 HSPs)
scaffold0564 (29-245)||(8258-8471)
[»] scaffold0058 (2 HSPs)
scaffold0058 (29-241)||(3294-3505)
scaffold0058 (29-241)||(4466-4677)
[»] scaffold0024 (1 HSPs)
scaffold0024 (29-162)||(37282-37415)
[»] scaffold0129 (2 HSPs)
scaffold0129 (31-162)||(4537-4668)
scaffold0129 (125-162)||(6035-6072)
[»] scaffold0092 (2 HSPs)
scaffold0092 (100-165)||(36834-36899)
scaffold0092 (125-165)||(34674-34714)
[»] scaffold0204 (2 HSPs)
scaffold0204 (38-162)||(30393-30517)
scaffold0204 (125-162)||(28419-28456)


Alignment Details
Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 22272575 - 22272330
Alignment:
Q  1 gacatcacatgcaatagaggggtataaatagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatc 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  22272575 gacaacacatgtaatagaggggtataaatagtccttgtacacgtggctgccttgttgacacatgtacatgacaacacaacatgcaagagaacacatcatc 22272476  T
Q  101 accactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  22272475 accactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatttgac 22272376  T
Q  201 tga-nnnnnnnaaaattcaagaacgaatttgaggtattagtcctaa 245  Q
    |||        |||||||||  ||||||||||||||||||||||||    
T  22272375 tgattttttttaaaattcaaagacgaatttgaggtattagtcctaa 22272330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 41825577 - 41825745
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||  |||||| ||||||||| | ||||||| ||||||||||||| |||||||||||||||||| |||| |    
T  41825577 tagtccttgtacacgtgactgccttgttgacatgtgtacaggacaacacagcatgcaagaagacacatcatcactactaacagagcttttggacggagtg 41825676  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaattt 197  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  41825677 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaattt 41825745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 8609721 - 8609931
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||| ||||| |||||| ||||||||| | |||||| |||||| |||||||||||||| ||||||||||| ||||||    
T  8609721 tagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacggagcttttggacggaggg 8609819  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||| | ||       ||||||||||||||||||    
T  8609820 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga-ttttttaaaattcaagaacgaatt 8609918  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  8609919 tgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 41042517 - 41042686
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||| |||| ||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  41042517 tagtccttgtacccgtggctgccttgttgacacatgtgcaggacaacacagcatgcaagaggacacatcatcaccactaacggagcttttggacggaggg 41042616  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttg 198  Q
    || |||||||||||||  |||||||||||||||||||||||||||| | |||||||||  ||||||||||    
T  41042617 accattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatttg 41042686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 238
Target Start/End: Complemental strand, 42941985 - 42941777
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||| ||| ||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| ||| ||||||| ||||||    
T  42941985 tagtccttgtacatgtggctgccttgttgacacgtgtacctgacaacacaacatgcaagaggacacatcatctccactaacggagattttggacggaggg 42941886  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||| | |||||||||  ||| |||||| ||||       |||||||||| |||||||    
T  42941885 actattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctga-ttttttaaaattcaaggacgaatt 42941787  T
Q  229 tgaggtatta 238  Q
    ||||||||||    
T  42941786 tgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 7745045 - 7745219
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||  |||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||    
T  7745045 tagtccttgtacatatgactgccttgttgacacgtgtacaagacaacacatcatgcaagaggacacatcatcaccactaacggagcttttggatggaggg 7745144  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
    || ||||||||||| || |||||||| ||||||||||||| ||||| |||||||||||  ||| |||||| ||||    
T  7745145 accattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctga 7745219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 183
Target Start/End: Original strand, 13486032 - 13486186
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||| |||||| | ||||||||| ||||||||||||||||||||| |||||  |||||||||||  |||||    
T  13486032 tagtccttgtacacgtgactgccttgttgacacgtgtacagggcaacacaacatgcaagaggacacatcatcactactaatggagcttttggacagaggg 13486131  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaat 183  Q
    || |||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  13486132 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaat 13486186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 9673098 - 9673255
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| || ||||||    
T  9673098 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaagacacatcatcaccactaacgaagcttttagacggaggg 9673197  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||    
T  9673198 accattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattca 9673255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 51 - 238
Target Start/End: Original strand, 26242269 - 26242455
Alignment:
Q  51 cttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgta 150  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||||| ||||    
T  26242269 cttgttgacacgtgtacaagacaacacaacatgcaagaggacacatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgta 26242368  T
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtatta 238  Q
    |||||||| ||||||||||||||| ||||||||| |  ||| |||||| ||||       |||||||||||||||| |||||||||||    
T  26242369 aaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctga-tttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 38547438 - 38547282
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||| |||||| |||||||||||||| ||||||||||||||||||    
T  38547438 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacggagcttttggatggaggg 38547340  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  38547339 accattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 38547282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 5036660 - 5036446
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagct----tttggatgg 124  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||||    |||||| ||    
T  5036660 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagaggacacatcatcatcactaacagagctttaatttggacgg 5036561  T
Q  125 agggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacg 224  Q
    || ||| |||||||| ||||| ||||||||||| |||||||||||||||| | |||||||||  ||| |||||||| ||       |||||| ||| |||    
T  5036560 agagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacgga-ttttttaaaatttaaggacg 5036462  T
Q  225 aatttgaggtattagt 240  Q
    ||||||||||||||||    
T  5036461 aatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 13108270 - 13108426
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||| |||||| ||||||||||||||  |||||||||| ||||||    
T  13108270 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacgaagcttttggacggaggg 13108368  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  13108369 accattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 13108426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 40339613 - 40339758
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||  |||||||||||||||||| ||||| |||| |||||||||| |||||| ||||||||||||| ||||    
T  40339613 tagtccttgtacacgtggctgccttgttgacaggtgtacatgacaacacaacatgcaaaaggatacatcatcactactaacggagcttttggatgaaggg 40339712  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    || |||||||||||| | ||||||||||| ||||||||||||||||    
T  40339713 accattttgatggacatctgtaaaattcatggactaaatagatatt 40339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 13282654 - 13282478
Alignment:
Q  63 tgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 162  Q
    |||||| ||||||| | | |||||| ||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  13282654 tgtacaagacaacagagcatgcaag-ggacacatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggac 13282556  T
Q  163 taaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| ||||||||||||||||||||    
T  13282555 taaatagatatttcgcaaaattcagggacgaatttggccga-ttttttaaaattcaaggacgaatttgaggtattagtc 13282478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 27691365 - 27691152
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||| |||||| |||||| ||||||| | | ||||||| | ||||||||||| | | || || |||||||| ||||||    
T  27691365 tagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattgacggaccttttggacggaggg 27691266  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||   |||||||||||| ||||||||||||||||||| | |||||| |||||||||||  ||| || ||| | ||       |||||||||| |||||||    
T  27691265 acggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga-tttttcaaaattcaaggacgaatt 27691167  T
Q  229 tgaggtattagtcct 243  Q
    |||||||||||||||    
T  27691166 tgaggtattagtcct 27691152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 244
Target Start/End: Original strand, 33708737 - 33708950
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || |||| |||| | ||| |||||||||| | | ||||||| | ||||||||||| | |||| || |||||||| ||||||    
T  33708737 tagtccttgtacacgtggttgacttgctgacgcgtgtgcatgacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggaggg 33708836  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||   |||||||||||||||||||||||||||||||| |  ||||| |||||||||||  ||| || ||||| |        |||||||||| | |||||    
T  33708837 acagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaaattgaccg--ttttttaaaattcaaggatgaatt 33708934  T
Q  229 tgaggtattagtccta 244  Q
    ||||||||||||||||    
T  33708935 tgaggtattagtccta 33708950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 22270942 - 22270877
Alignment:
Q  237 tagtcctaattataatttgaaagttatacctaccaacgcaataaaaaacgtagagacggactgcag 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  22270942 tagtcctaattataatttgaaagttatacctaacaacgcaataaaaaacgtagagatggacggcag 22270877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 15145749 - 15145808
Alignment:
Q  103 cactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 162  Q
    |||||||||||| |||||| ||| ||||||||||||| ||||||||| ||||||||||||    
T  15145749 cactaacagagcatttggacggaaggactattttgatcgacgtttgttaaattcagggac 15145808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 15305947 - 15305863
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    |||||||||||||   |||| ||  ||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||||||    
T  15305947 gacacatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatt 15305863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 15486316 - 15486232
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    |||||||||||||   |||| ||  ||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||||||    
T  15486316 gacacatcatcactgttaacggatattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatt 15486232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 241
Target Start/End: Complemental strand, 26238843 - 26238726
Alignment:
Q  123 ggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaa 222  Q
    |||||||||  |||||||||| |||   ||||||  |||||||||||||||| |||||||||||  ||| |||||| ||||       |||||||||| |    
T  26238843 ggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctga-tttttgaaaattcaagga 26238745  T
Q  223 cgaatttgaggtattagtc 241  Q
    |||||||||||||||||||    
T  26238744 cgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 33750332 - 33750452
Alignment:
Q  64 gtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggact 163  Q
    ||||| ||||||||||| ||||||| |||| |||| || | ||||||||||  ||||| ||||||||  |||||||| | || ||  |||||||||||||    
T  33750332 gtacaagacaacacaacatgcaagacgacagatcaacatcgctaacagagcacttggacggagggacctttttgatgaatgtctgacaaattcagggact 33750431  T
Q  164 aaatagatattacgcaaaatt 184  Q
    || | |||||| |||| ||||    
T  33750432 aagttgatatttcgcataatt 33750452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 42943426 - 42943515
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| ||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga-ttttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 9184588 - 9184449
Alignment:
Q  35 ttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactatt 134  Q
    |||||||||||  |  |||||||||||||||||| ||||||||| | |||| |  |||| |||| || ||||||   ||| |||||| |||||||| |||    
T  9184588 ttgtacacgtggattccttgttgacacatgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagcatttggacggagggaccatt 9184489  T
Q  135 ttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    | ||| ||||| ||  ||||||||||||||| | ||||||    
T  9184488 tcgatcgacgtctgacaaattcagggactaatttgatatt 9184449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 37525936 - 37526091
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||| ||||||| ||  ||| ||| ||| |||| | ||||||||||| | || || |||| |||| ||  |||||||| ||  ||||| ||||||    
T  37525936 tagtccttgaacacgtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaacagcgcacttggacggaggg 37526035  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||  |||||||||| || || |||||||||||||||| | |||||| |||| ||||    
T  37526036 acctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataatt 37526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 44526777 - 44526694
Alignment:
Q  82 tgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    ||||||| ||||  ||| ||||||||||||||| |||| | ||| |||||| |||||| | ||||||| |||||||||||||||    
T  44526777 tgcaagacgacaactcagcaccactaacagagcatttgaacggaaggactaatttgattggcgtttgttaaattcagggactaa 44526694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 11722730 - 11722863
Alignment:
Q  37 gtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactatttt 136  Q
    ||||||||| ||  ||||||||||| ||||||  |||||||||| ||||||| |||| |||| || || |||  |||| | |||| |||||||  | |||    
T  11722730 gtacacgtggcttccttgttgacacgtgtacaacacaacacaacatgcaagacgacatatcagcatcagtaatggagcatctggacggagggatgaattt 11722829  T
Q  137 gatggacgtttgtaaaattcagggactaaataga 170  Q
    ||| ||||||||| |||||||  ||| |||||||    
T  11722830 gattgacgtttgttaaattcaaagacgaaataga 11722863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 11788530 - 11788405
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    |||||||||||| || ||| ||   |||||| ||||||  |||||||||| | ||||| ||||| ||| || ||||||||||| | ||||| |||||||     
T  11788530 gtccttgtacacatggctgactatatgacacgtgtacaaaacaacacaacatacaagaagacacctcagcatcactaacagagatattggacggagggat 11788431  T
Q  131 tattttgatggacgtttgtaaaattc 156  Q
     | |||||||||||| ||| ||||||    
T  11788430 gaatttgatggacgtctgttaaattc 11788405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 42897687 - 42897832
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||| ||||||| ||  ||| ||| ||| |||||| ||||||||| | |||| || |||| |||| ||   ||||||||||  ||||| ||||||    
T  42897687 tagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaacagagcacttggacggaggg 42897786  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    ||  ||||||||||||| ||  ||||||| ||||||| | ||||||    
T  42897787 acctttttgatggacgtctgacaaattcaaggactaagttgatatt 42897832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 5038062 - 5038150
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    ||||||||||||||||||| |||| ||||||||||||  || |||||||| ||       |||||||||| ||||||||||||||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccga-ttttttaaaattcaag-acgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 22273891 - 22273980
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    ||||||||||||||||||||||||  ||||||||||  |||||||||| | ||       |||||||||| || |||||||||||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccga-ttttttaaaattcaaggacaaatttgaggtattagtc 22273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 462359 - 462438
Alignment:
Q  105 ctaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||||||||||  |||||||||||||   ||||||||||||||||  ||||||| ||||||| | |||||| |||| ||||    
T  462359 ctaacagagcacttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataatt 462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 27406891 - 27406965
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggacta 164  Q
    |||||||||||||   |||| ||  ||||||| |||| ||||  |||||||||||| ||||||||||||||||||    
T  27406891 gacacatcatcactgttaacggacattttggacggagagactgatttgatggacgtctgtaaaattcagggacta 27406965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 38882712 - 38882854
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||| ||||||||||  ||||||| |||  ||||| ||||||||| | |||| || |||| |||| ||   ||||| ||||  ||||| ||||||||    
T  38882712 gtccttgaacacgtgacttccttgttgccacgagtacaagacaacacagcatgcaggacgacagatcaacatggctaacggagcacttggacggagggac 38882811  T
Q  131 tattttgatggacgtttgtaaaattcagggactaaatagatat 173  Q
      |||| |||||||| ||  ||||||||||| ||||| |||||    
T  38882812 attttttatggacgtctgacaaattcagggattaaattgatat 38882854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 9672066 - 9671980
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtatta 238  Q
    |||||| ||||||||||||||||| |||||||||||  ||| ||||||| |||       |||||||||| |||||||| ||||||||    
T  9672066 aaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattga-ttggtgaaaattcaaggacgaatttaaggtatta 9671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 44528149 - 44528190
Alignment:
Q  125 agggactattttgatggacgtttgtaaaattcagggactaaa 166  Q
    |||||||| |||||| ||||||||| ||||||||||||||||    
T  44528149 agggactaatttgattgacgtttgttaaattcagggactaaa 44528190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 23293103 - 23293314
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  23293103 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaacggagcttttggacggaggg 23293202  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | | |||||| ||||        |||||||||||| ||||    
T  23293203 actattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaatttggctgatttttcg-aaattcaagaacaaatt 23293301  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  23293302 tgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 27899014 - 27899225
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||| || ||| ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  27899014 tagtccttgtacacatggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttggacggaggg 27899113  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||| | ||       |||||||||| |||||||    
T  27899114 accatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccga-ttttttaaaattcaaggacgaatt 27899212  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  27899213 tgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 21348934 - 21348723
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||| | | ||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  21348934 tagtctttgtacacgtggccgccttattgacacgtgtacatgacaacacaacatgcaagaggacacattatcaccactaacagagcttttggacggaggg 21348835  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||| | ||       |||||||||| || ||||    
T  21348834 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccga-ttttttaaaattcaaggacaaatt 21348736  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  21348735 tgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 46112698 - 46112487
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| | ||||||    
T  46112698 tagtctttgtacacgtgactgacttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacatagcttttgaacggaggg 46112599  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||||| ||||||||||||||||  |||||||||||| || |||||| | ||       |||||||||| |||||||    
T  46112598 accattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccga-ttttttaaaattcaaggacgaatt 46112500  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  46112499 tgaggtattagtc 46112487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 53190693 - 53190903
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||||| |||||| |||||||||||||| ||||||||||| ||||||    
T  53190693 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaag-ggacacgtcatcaccactaacggagcttttggacggaggg 53190791  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| |||||||    
T  53190792 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga-ttttttaaaattcaaggacgaatt 53190890  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  53190891 tgaggtattagtc 53190903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 42279718 - 42279562
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  42279718 tagtccttgtacacgtgtctgccttgttgacacgtgtataagacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggaggg 42279619  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattc 185  Q
    || |||||||| ||||| ||||||||||||||||||||||||||||  |||||||||    
T  42279618 accattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattc 42279562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 43765348 - 43765192
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||| ||| ||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  43765348 tagtcattgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgtaagaggacacatcatcaccactaacggagcttttggatggaggg 43765249  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattc 185  Q
    || |||||||||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  43765248 accattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattc 43765192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 242
Target Start/End: Original strand, 30599851 - 30600063
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||| ||||||  |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  30599851 tagtccttgtacacgtggctgccttattgacatgtgtacaagacaacacagcatgcaagaggacacatcatcaccactaacagagcttttggacggaggg 30599950  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||| ||||| | |||||||||||||||||||||||||| |||||||||||  |||||||||| | ||       |||||| ||| |||||||    
T  30599951 accattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccga-tttgtaaaaatttaaggacgaatt 30600049  T
Q  229 tgaggtattagtcc 242  Q
    ||||||||||||||    
T  30600050 tgaggtattagtcc 30600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 51684821 - 51684610
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  51684821 tagtccttgtacacgtgtctgccttgttgacacgtgtacaggacaacacaacacgcaagaggacacatcatcaccactaacggagcttttggacggaggg 51684722  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||  ||  |||||| ||||       |||||||||| |||||||    
T  51684721 accattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctga-tttttgaaaattcaaggacgaatt 51684623  T
Q  229 tgaggtattagtc 241  Q
    |||| ||||||||    
T  51684622 tgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 48830739 - 48830912
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  48830739 tagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggaggg 48830838  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
    || ||||||||||||||  ||||||||||  ||||||||||||||| ||  |||||| ||||  |||||||||||    
T  48830839 accattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattc-atgaacaatttgactga 48830912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 17515521 - 17515364
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||| ||||||  |||||| ||||||||||| ||||| |||||||||||||||||||||| | | |||||||  |||||    
T  17515521 tagtccttgtacacgtggctgccttattgacaagtgtacaagacaacacaacatgcaaaaggacacatcatcaccactaacggtgattttggacagaggg 17515422  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17515421 accattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattca 17515364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 44276129 - 44276266
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  44276129 tagtccttgtacacgtggctgtcttgttgacacgtgtacatgacgacacaacatgtaagaggacacatcatcaccactaacagagcttttggacggaggg 44276228  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaa 166  Q
    || |||||||||| ||| ||||||||||| ||||||||    
T  44276229 accattttgatgggcgtctgtaaaattcaaggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 2226086 - 2226296
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||  ||||||||||| |||||| ||||||||| | |||||| |||||| |||||||||||||||||| ||||||| ||||||    
T  2226086 tagtccttgtacacgtggctaccttgttgacacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacagagtttttggacggaggg 2226184  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    |  ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| |||||||    
T  2226185 aacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga-ttttttaaaattcaaggacgaatt 2226283  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  2226284 tgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 54898647 - 54898437
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| |||||| |||| |||||| |||||| |||||  ||||||| ||||||||||| |||| |    
T  54898647 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacgcaacatgcaag-ggacacgtcatcgtcactaacggagcttttggacggagag 54898549  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  54898548 accattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacgaatt 54898450  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  54898449 tgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 200
Target Start/End: Original strand, 35905646 - 35905816
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| |||||| || | |||||| |||||| |||||||||||| | ||||||||||| ||||||    
T  35905646 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacccatcatgcaag-ggacacgtcatcaccactaccggagcttttggacggaggg 35905744  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||  ||| ||||||||    
T  35905745 accattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgac 35905816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 41977960 - 41977750
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||| |||||| ||||||||| ||||  |||||||||| ||||||    
T  41977960 tagtccttgtacacgtgactgccttgttgacacgtgtacaagacaacacaacatgcaag-ggacacgtcatcaccattaacgaagcttttggacggaggg 41977862  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||| |||||| ||||||||||||||||||| | |||||| ||| |||||||  |||  ||||| | ||       |||||||||| |||||||    
T  41977861 accattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccga-ttttttaaaattcaaggacgaatt 41977763  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  41977762 tgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 46197931 - 46197760
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||  ||| ||||||||||| || |||| |||||||||| |||||||||| ||||||||| ||||||| || |||||||| | ||||    
T  46197931 tagtccttgtacacgtagctgccttgttgacacgtgcacataacaacacaacatgcaagaggaaacatcatcatcactaacggaacttttggacgaaggg 46197832  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    || ||||| |||||||| ||||||||||||| ||||||||||||||  ||||||||||  ||| ||||||||    
T  46197831 accattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacgaatttgac 46197760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 2377240 - 2377083
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||  |||||||| ||| ||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||| |||||||| || |||||     
T  2377240 tagtcctattacacgtggctgccttgttgacacgtgtacatgacaacacatcatgcaagaggacacgtcatcaccactaacggagcttttagacggagga 2377141  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| |||||||||||| ||||||||| || ||  ||||||||||    
T  2377140 accattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattca 2377083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 600920 - 600805
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| |||  |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||||    
T  600920 tagtccttgtacacgtggctgctttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttagacggaggg 600821  T
Q  129 actattttgatggacg 144  Q
    || |||||||||||||    
T  600820 accattttgatggacg 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 19987530 - 19987684
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||  |||||| ||||   || | ||||||| | ||||||||||| ||||||||| |||||||| ||||||    
T  19987530 tagtccttgtacacgtgactgacttgttgacatgtgtacaggaca---cagcatgcaagaagccacatcatcactactaacagaccttttggacggaggg 19987626  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    |||  |||||||||||| ||||||||| ||||||||| | |||||| |||||||||||    
T  19987627 actgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattca 19987684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 3152151 - 3152308
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||||| | | || |||| | ||||||||||| | |||| || |||||||| ||||||    
T  3152151 tagtccttgtacacgtggctgacttgctgacacgtgtacatgacaacaaagcatgtaagaagccacatcatcactattaacggaccttttggacggaggg 3152250  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    ||   |||||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  3152251 acggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 3152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 7884807 - 7884939
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||| |||| ||| ||| ||||||||||| |||||| ||||||||||| |||||| |||||  |||||||||||||| || |||||||| ||||||    
T  7884807 tagtccttatacatgtggctgccttgttgacacgtgtacaagacaacacaacatgcaag-ggacatgtcatcaccactaacggaacttttggacggaggg 7884905  T
Q  129 actattttgatggacgtttgtaaaattcagggac 162  Q
    || |||||||||||||| ||||||||||||||||    
T  7884906 accattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 44794418 - 44794261
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||| |||||| |||||| ||||||| | | ||||||| | ||||||||||| | |||| || |||||||| ||||||    
T  44794418 tagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggaggg 44794319  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || | |||||||||| | || |||||||||||||||| | |||||| |||||||||||    
T  44794318 acgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattca 44794261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 2660423 - 2660266
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||| ||| ||| |||| |||||| |||| | ||||||| | | ||||||| | |||||||||   | ||||||| |||||||| ||||||    
T  2660423 tagtccttgtacaagtggctgacttgctgacacgtgtagaggacaacaaagcatgcaagaagccacatcatcgttattaacagaccttttggacggaggg 2660324  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || | |||||||||||| ||||||||||| ||||||| | |||||| |||||||||||    
T  2660323 acgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattca 2660266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 54092821 - 54092764
Alignment:
Q  105 ctaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 162  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  54092821 ctaacagagcatttggacggaaggactattttgatggacgtttgttaaattcagggac 54092764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 5133184 - 5133068
Alignment:
Q  52 ttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaa 151  Q
    |||| ||||| |||||| |||||||  || |||| || ||||  ||| || ||||||| |||| |||||| ||| ||||||||||||||||||||||| |    
T  5133184 ttgtagacacgtgtacaagacaacaggacatgcatgacgacagctcagcagcactaacggagcatttggacggaaggactattttgatggacgtttgtta 5133085  T
Q  152 aattcagggactaaata 168  Q
    |||||| |||| |||||    
T  5133084 aattcaaggacaaaata 5133068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 5126010 - 5125884
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||||||| ||   |||| ||||| |||||| |||||||  || |||| || ||||  ||| || ||||||| |||| ||||||  || ||||    
T  5126010 gtccttgtacacgtggcttctttgtagacacgtgtacaagacaacaggacatgcaggacgacaactcagcagcactaacggagcatttggaccgaaggac 5125911  T
Q  131 tattttgatggacgtttgtaaaattca 157  Q
    ||||||||||||||||||| |||||||    
T  5125910 tattttgatggacgtttgttaaattca 5125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 241
Target Start/End: Complemental strand, 30598454 - 30598337
Alignment:
Q  123 ggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaa 222  Q
    |||||||||| |||||| ||| |||   ||||||| |||| |||||| |||| |||||||||||  |||||||||||| ||       |||||||||| |    
T  30598454 ggagggactaatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccga-tttttgaaaattcaagga 30598356  T
Q  223 cgaatttgaggtattagtc 241  Q
    |||||||||||||||||||    
T  30598355 cgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 238
Target Start/End: Original strand, 42282473 - 42282559
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtatta 238  Q
    ||||||| |||||||||||||||| |||||||||||   || |||||||||||       |||||||||| |||||||||||||||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactga-tttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 23774268 - 23774208
Alignment:
Q  124 gagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    |||||||| ||||||||||||| ||  ||||||||||||||||| |||||| |||| ||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataatt 23774208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 46114105 - 46114152
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttg 198  Q
    |||||||  ||||||||||||||| |||||||||||| ||||||||||    
T  46114105 aaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttg 46114152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 54412517 - 54412596
Alignment:
Q  121 atggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    |||||||||||  |||||| ||| |||   ||||||||| |||||||||||||  |||||||||||| ||| ||||||||    
T  54412517 atggagggactgatttgattgacattttgtaaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgac 54412596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 40508853 - 40508979
Alignment:
Q  58 acacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattca 157  Q
    |||| |||||||||||||||||| |||| |  |||| |||| ||| |||||| || |  ||||| ||||||||  ||||||||||||| ||  |||||||    
T  40508853 acacgtgtacatgacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattca 40508952  T
Q  158 gggactaaatagatattacgcaaaatt 184  Q
     ||| ||| | |||||| |||| ||||    
T  40508953 aggattaagttgatatttcgcataatt 40508979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 41623789 - 41623735
Alignment:
Q  103 cactaacagagcttttggatggagggactattttgatggacgtttgtaaaattca 157  Q
    ||||||| |||| |||| | ||| ||||||||||||||||||||||| |||||||    
T  41623789 cactaacggagcatttgaacggaaggactattttgatggacgtttgttaaattca 41623735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 23888772 - 23888821
Alignment:
Q  116 tttggatggagggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||| ||||||||  ||||||||||||||||  |||||||||||||||    
T  23888772 tttggacggagggacctttttgatggacgtttgacaaattcagggactaa 23888821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 41979411 - 41979448
Alignment:
Q  211 aaaattcaagaacgaatttgaggtattagtcctaatta 248  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  41979411 aaaattcaaggacgaatttgaggtattagtccaaatta 41979448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 8539886 - 8539675
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||| ||||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||| |    
T  8539886 tagtccttgcacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacaccatcaacactaacggagcttttggatggagcg 8539787  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||||||| |||       |||||||||| |||||||    
T  8539786 actattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattga-tttttcaaaattcaaggacgaatt 8539688  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  8539687 tgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 34327846 - 34327635
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||| |    
T  34327846 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacgcaacatgcaagaggacacatcatcaccactaacagagcttttggacggagag 34327747  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||| |  |       |||||||||| |||||||    
T  34327746 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggc-caattttagaaaattcaaggacgaatt 34327648  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  34327647 tgaggtattagtc 34327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 36057525 - 36057738
Alignment:
Q  28 atagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagg 127  Q
    |||||||||||||| ||| ||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||| |||||    
T  36057525 atagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagatgacacatcatcaccattaacggagcttttggacggagg 36057624  T
Q  128 gactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaat 227  Q
    ||| |||||||||||||| |||||||||||||| ||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| ||||||    
T  36057625 gaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccga-tttttgaaaattcaaggacgaat 36057723  T
Q  228 ttgaggtattagtcc 242  Q
    |||||||||||||||    
T  36057724 ttgaggtattagtcc 36057738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 30468193 - 30468348
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  30468193 tagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttggacggaggg 30468292  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || |||||||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  30468293 accattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaatt 30468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 17574528 - 17574318
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||| |||||| |||||||||||||| ||||||||||| ||||||    
T  17574528 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-ggacacgtcatcaccactaacggagcttttggacggaggg 17574430  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| |||||||    
T  17574429 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga-ttttttaaaattcaaggacgaatt 17574331  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  17574330 tgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 7268053 - 7267839
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | ||| || |||||| |||||||||||||| ||||||||||| ||||||    
T  7268053 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcgag-ggacacgtcatcaccactaacggagcttttggacggaggg 7267955  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    |  |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||||   ||       |||||||||| |||||||    
T  7267954 atcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacga-ttttttaaaattcaaggacgaatt 7267856  T
Q  229 tgaggtattagtcctaa 245  Q
    |||||||||||||||||    
T  7267855 tgaggtattagtcctaa 7267839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 2179998 - 2179787
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||||||||||||| ||||||||||||  |||||||||||||  ||||||||||| ||||||    
T  2179998 tagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaatggagcttttggacggaggg 2179899  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||||||| || ||||||||||||||| |||||||||||| | |||||||||  ||| |||||||| ||       |||||||||| || ||||    
T  2179898 accattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacaaatt 2179800  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  2179799 tgaggtattagtc 2179787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 18624921 - 18625129
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||| | ||||||||||| ||||||| ||||||||||||| |||||| ||||||||||| ||| ||    
T  18624921 tagtccttgtacacgtggttgccttgttgacacgtgtataagacaacacaacatgcaagaagacacatcatcactactaacggagcttttggacggaagg 18625020  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||  |||||||||||||||||||||||||||| | |||||||||  ||| |||||  ||||       |||||||||| |||||||    
T  18625021 accattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctga-tcagtgaaaattcaaggacgaatt 18625119  T
Q  229 tgaggtatta 238  Q
    ||||||||||    
T  18625120 tgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 24541124 - 24541282
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagg- 127  Q
    ||||||||||||| ||| ||| |||| |||||| |||||| ||||||| | | ||||||| | ||||||||||| | ||| ||| |||||||| |||||     
T  24541124 tagtccttgtacatgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaatagaccttttggacggagga 24541223  T
Q  128 gactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    ||  | |||||||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  24541224 gatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 24541282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 28819498 - 28819391
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||| ||||||  || ||||||||||| ||||||||||| |||| | || ||||||||||||||||| ||||||| ||||||||||| ||||||    
T  28819498 tagtccttgtgcacgtggttgccttgttgacacgtgtacatgacatcacatcatgtaagaggacacatcatcatcactaacggagcttttggacggaggg 28819399  T
Q  129 actatttt 136  Q
    || |||||    
T  28819398 accatttt 28819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 2854241 - 2854450
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||| |||||| |||||| ||||||| | | ||||||| | ||||||||||| | |||  || |||||||| ||||||    
T  2854241 tagtccttgtacacgtggctgacttgctgacacgtgtacaagacaaca-agcatgcaagaagccacatcatcactattaatggaccttttggacggaggg 2854339  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || | |||| ||||||| ||||||||||||||||||| | ||| || || ||||||||  ||| || ||||| ||       |||||||||| |||||||    
T  2854340 acgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccga-tttttcaaaattcaaggacgaatt 2854437  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  2854438 tgaggtattagtc 2854450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 29621755 - 29621851
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||  |||||||||||| || |||||||||||||||| | |||||| || ||||||||    
T  29621755 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattca 29621851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||||||||||||||| |||||||||||  ||| |||||||| ||       |||||||||| ||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 40780700 - 40780604
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    |||||||||||||   |||| ||  ||||||| |||||||||  ||||||||||||||| |||||||||||||||| | |||||| || ||||||||    
T  40780700 gacacatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattca 40780604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 12737349 - 12737305
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgaca 73  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||    
T  12737349 tagtccttgtacacgtggctgtcttgttgacacgtgtacatgaca 12737305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 12800172 - 12800128
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgaca 73  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||    
T  12800172 tagtccttgtacacgtggctgtcttgttgacacgtgtacatgaca 12800128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 28813765 - 28813812
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttg 198  Q
    |||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttg 28813812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 18728549 - 18728670
Alignment:
Q  63 tgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 162  Q
    |||||| ||||||||| | ||||||  |||| |||| ||   ||||||||||  ||||| ||||||||  ||||||||||||| ||  ||||||||||||    
T  18728549 tgtacaagacaacacagcatgcaaggtgacagatcagcaaggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattcagggac 18728648  T
Q  163 taaatagatattacgcaaaatt 184  Q
    ||| | |||||| |||| ||||    
T  18728649 taagttgatatttcgcataatt 18728670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 43492131 - 43492168
Alignment:
Q  149 taaaattcagggactaaatagatattacgcaaaattca 186  Q
    |||||||||||||||||||||||||| |||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattca 43492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 12738736 - 12738825
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||||||||||||||| |||||||||||   || |||||| | ||       |||||||||| ||||||||||||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccga-ttttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 12801559 - 12801648
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||||||||||||||| |||||||||||   || |||||| | ||       |||||||||| ||||||||||||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccga-ttttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 32087649 - 32087570
Alignment:
Q  105 ctaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||||||||||  ||||| ||||||||  ||||||||||||| || |||||| ||||||||| | |||||| |||| ||||    
T  32087649 ctaacagagcacttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataatt 32087570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 42473581 - 42473655
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggacta 164  Q
    |||||||||||||   |||| ||  ||||||| ||| |||||  |||||||||||| ||||||||||||||||||    
T  42473581 gacacatcatcactgttaacggacattttggacggaaggactgatttgatggacgtctgtaaaattcagggacta 42473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 24496952 - 24496783
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    |||||||||||| |||||  ||||||||||| |||||  ||||||| | | |||| || |||| |||| ||  | ||||||| | |||||| ||| ||||    
T  24496952 gtccttgtacacatgacttccttgttgacacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggac 24496853  T
Q  131 tattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
     ||||||||| |||| |   ||||||||||| ||| | |||||| | || |||| |  ||||||||||||    
T  24496852 cattttgatgaacgtctcacaaattcagggattaatttgatatttcacataattgagggacaaatttgac 24496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 15459182 - 15459242
Alignment:
Q  109 cagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatag 169  Q
    |||||| |||||| | |||||| |||||||||||||| ||| ||||||||| || ||||||    
T  15459182 cagagcatttggacgaagggaccattttgatggacgtctgttaaattcaggaacaaaatag 15459242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 3e-61; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 19908179 - 19908391
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  19908179 tagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttggacggaggg 19908278  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||| |||||| ||||||||||| |||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| |||||||    
T  19908279 accattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatt 19908378  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  19908379 tgaggtattagtc 19908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 40560434 - 40560260
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  40560434 tagtccttgtacacgtggctgccttgttgacacgcgtacatgacaacacagcatgcaagaggacacatcatcaccactaacagaacttttggacggaggg 40560335  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||| ||||    
T  40560334 actattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctga 40560260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 237
Target Start/End: Original strand, 42519138 - 42519346
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||    
T  42519138 tagtccttgtacacgtgactgccttgttgacacgtgtacaggacaacacagcatgcaagaggacacatcatcaccactaacggagcttttggatggaggg 42519237  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgc-aaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaat 227  Q
    || |||||||||||||| ||||||||||||||||||||||||||||  || ||||||||| ||| ||||||| | |       |||||||||| ||||||    
T  42519238 accattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggactaatttga-tcaattttttaaaattcaaggacgaat 42519336  T
Q  228 ttgaggtatt 237  Q
    ||||||||||    
T  42519337 ttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 39664681 - 39664892
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  39664681 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagctagcaagaggacacatcatcaccactaacggagcttttggacggaggg 39664780  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| || |||||||   ||| |||||| | ||       |||||||||| |||||||    
T  39664781 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccga-ttttttaaaattcaaggacgaatt 39664879  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  39664880 tgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 16763286 - 16763076
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||| ||||| |||||| |||||| ||||| |||||||||||| ||||||| ||||||    
T  16763286 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaaaacaacatgcaag-ggacacgtcatcgccactaacagagattttggacggaggg 16763188  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  16763187 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga-tttttaaaaattcaaggacgaatt 16763089  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  16763088 tgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 44709678 - 44709835
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  |||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||||||||  |||||||||| ||||||    
T  44709678 tagtccttgtacacgtggatgtcttgttgacacgtgtacaagacaacacaacatgcaagaggacatatcatcaccactaacgaagcttttggacggaggg 44709777  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  44709778 accattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattca 44709835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 36 - 241
Target Start/End: Complemental strand, 2767138 - 2766934
Alignment:
Q  36 tgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattt 135  Q
    |||||||||||||| |||||| |||| |||||| ||||||||||| | |||||||||||||||||||||||||| |||||||||||  ||||||| ||||    
T  2767138 tgtacacgtgactgccttgttaacacgtgtacaggacaacacaacatacaagaggacacatcatcaccactaacggagcttttggacagagggaccattt 2767039  T
Q  136 tgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggta 235  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||| ||| | |||||| ||       |||||||||| ||||||||||| ||    
T  2767038 tgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccga-tttttaaaaattcaaggacgaatttgagcta 2766940  T
Q  236 ttagtc 241  Q
    ||||||    
T  2766939 ttagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 14389017 - 14389228
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||| ||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||  | |||||||| ||||||    
T  14389017 tagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacaacatgcaagaggacacatcatcactactaacgaaacttttggacggaggg 14389116  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||  |||||||    
T  14389117 accattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccga-tttttgaaaattcaatgacgaatt 14389215  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  14389216 tgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 17696417 - 17696272
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||| || ||| ||||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||| |||| |    
T  17696417 tagtccttgtacacatggctgccttgttgacacgtgtacaggacaacacaacatgcaagatgacacatcatcaccactaacggagcttttggacggagtg 17696318  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    || |||||||| ||||||||||||||||||||||||||||||||||    
T  17696317 accattttgattgacgtttgtaaaattcagggactaaatagatatt 17696272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 6797718 - 6797561
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||||||| |||||||||||  |||||||||||||||| |||||     
T  6797718 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagaggatacatcatcacccgtaacagagcttttggacggagga 6797619  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||    
T  6797618 accattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattca 6797561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 39455380 - 39455223
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||| |||| |  || ||||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||| | |||| |    
T  39455380 tagtccttgtgcacgagggtgccttgttgacacgtgtacatgacaacacaacatgcaagagggcacatcatcgccactaacggagcttttgaacggagag 39455281  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||    
T  39455280 accattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattca 39455223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 16377174 - 16377301
Alignment:
Q  73 aacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagata 172  Q
    |||||| | |||||||| |||| |||||||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  16377174 aacacagcatgcaagagaacacgtcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagata 16377273  T
Q  173 ttacgcaaaattcaatgacaaatttgac 200  Q
    ||  ||||||||||  ||||||||||||    
T  16377274 ttttgcaaaattcagggacaaatttgac 16377301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 37645696 - 37645524
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    |||||||||||||||  |||||||||||||| |||||| ||||||||| | | ||||| |||||||||||| || ||||||||||| |||| ||||||||    
T  37645696 gtccttgtacacgtggttgtcttgttgacacgtgtacaggacaacacagcatacaagatgacacatcatcatcaataacagagcttatggacggagggac 37645597  T
Q  131 tattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
     ||||||||  || | || |||||||| |||||||||||||||| |  |||||| || ||| |||| ||||||    
T  37645596 aattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactga 37645524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 37020658 - 37020548
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatg 189  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||  |||||||||||| || |||||||||||||||| | |||||| |  ||||||||| |    
T  37020658 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaagg 37020559  T
Q  190 acaaatttgac 200  Q
    ||||| |||||    
T  37020558 acaaaattgac 37020548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 62738 - 62866
Alignment:
Q  35 ttgtacacgtgactgtc-ttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactat 133  Q
    ||||||||||| || || |||||||||| |||||| | |||||  || |||| || ||||  ||| || ||||| | |||| |||||| ||| |||||||    
T  62738 ttgtacacgtggctttccttgttgacacgtgtacaaggcaacatgacatgcatgacgacaactcagcagcactagcggagcatttggacggaaggactat 62837  T
Q  134 tttgatggacgtttgtaaaattcagggac 162  Q
    |||||||||||||||| ||||||||||||    
T  62838 tttgatggacgtttgttaaattcagggac 62866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 6785975 - 6786059
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    |||||||||||||   |||||||  ||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||||||    
T  6785975 gacacatcatcactgttaacagacattttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatt 6786059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 7744254 - 7744099
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgca-agaggacacatcatcaccactaacagagcttttggatggagg 127  Q
    ||||| ||||||||||| ||  ||| ||||||  |||||||||||||||||| | || ||||   || ||| || ||||||| || ||||||||||||||    
T  7744254 tagtcattgtacacgtggcttcctttttgacatgtgtacatgacaacacaacatacagagagctaac-tcagcatcactaacggaccttttggatggagg 7744156  T
Q  128 gactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||| |||||||||||| |  |  |||||||||||| |||| |||||| |||||||||    
T  7744155 gaccattttgatggacatgagagaaattcagggacgaaattgatatttcgcaaaatt 7744099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 17946305 - 17946150
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||  ||| ||||||  |||||||||||||||||| | || |  | ||  | | || ||||||| || |||||||| ||||||    
T  17946305 tagtccttgtacacgtgacttcctttttgacatgtgtacatgacaacacaacatacagggagccagcttagcatcactaacggaccttttggacggaggg 17946206  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || |||||||||||| |  |  |||||||||||| |||| ||||||  ||||||||    
T  17946205 accattttgatggacatgagagaaattcagggacaaaattgatattttgcaaaatt 17946150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 159
Target Start/End: Complemental strand, 40097759 - 40097629
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||| |||||||||||| ||  ||||||||||| | || | |||||||| || ||||||| ||||  ||| || |||||| ||||| ||||||||||  |    
T  40097759 tagttcttgtacacgtggcttccttgttgacacgtatataagacaacacgacatgcaagacgacaactcagcagcactaatagagcatttggatggaatg 40097660  T
Q  129 actattttgatggacgtttgtaaaattcagg 159  Q
     | ||||| |||||||||||| |||||||||    
T  40097659 gccattttaatggacgtttgttaaattcagg 40097629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 19581520 - 19581414
Alignment:
Q  134 tttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgagg 233  Q
    |||||||||| ||||  ||||||  |||||||||||||||| |||||||||||  |||||||||| ||||       |||||| ||| ||||||||||||    
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctga-tttttaaaaatttaaggacgaatttgagg 19581422  T
Q  234 tattagtc 241  Q
    ||||||||    
T  19581421 tattagtc 19581414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 361659 - 361540
Alignment:
Q  26 aaatagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatgga 125  Q
    |||| ||||||||||||||| ||| |||| |||||  ||||||  ||| |||||| |||| || ||||| ||||||||| |||||||  | |||||  ||    
T  361659 aaatggtccttgtacacgtggctgacttgatgacatgtgtacaacacatcacaacatgcaggaagacacctcatcaccattaacagatatattggacaga 361560  T
Q  126 gggactattttgatggacgt 145  Q
    |||||||  |||||||||||    
T  361559 gggactaaattgatggacgt 361540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 24208061 - 24208120
Alignment:
Q  115 ttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    ||||||| |||||||||  |||||||||||| ||||||||||||||||||| | ||||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatt 24208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 15807903 - 15807968
Alignment:
Q  100 caccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||||||| | || |||||| ||| |||||| |||||| ||||||||| |||||||||||||||    
T  15807903 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 15807968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 32608051 - 32608116
Alignment:
Q  100 caccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||||||| | || |||||| ||| |||||| |||||| ||||||||| |||||||||||||||    
T  32608051 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 32608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 4416947 - 4417003
Alignment:
Q  106 taacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||||| ||| || ||| |||||||||| |||||||||||| ||||||||||||    
T  4416947 taacagagcatttagacggaaggactatttttatggacgtttgttaaattcagggac 4417003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 29909608 - 29909728
Alignment:
Q  64 gtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggact 163  Q
    ||||| ||||||||||| |||||   |||| |||| ||   ||||||||||  ||||| ||||||||  ||||||||||||| ||  ||||| |||||||    
T  29909608 gtacaagacaacacaacatgcaacgcgacagatcaacatggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattaagggact 29909707  T
Q  164 aaatagatattacgcaaaatt 184  Q
    |||| |||||| |||| ||||    
T  29909708 aaattgatatttcgcataatt 29909728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 862227 - 862354
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    |||||||||||| || ||  ||||| ||||| |||||| |||||||   | |||| || ||||  ||| || ||||||| |||| |||||| ||| ||||    
T  862227 gtccttgtacacatggcttccttgtagacacgtgtacaagacaacaagccatgcaggaagacaactcaacagcactaacggagcatttggacggaaggac 862326  T
Q  131 tattttgatggacgtttgtaaaattcag 158  Q
    ||||||||| ||||||| | ||||||||    
T  862327 tattttgattgacgtttattaaattcag 862354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 10716818 - 10716873
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaa 86  Q
    ||||||||||||||| ||  ||||||||||| |||||| ||||||||||| |||||    
T  10716818 gtccttgtacacgtggcttccttgttgacacgtgtacaagacaacacaacatgcaa 10716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 13999936 - 13999890
Alignment:
Q  111 gagcttttggatggagggactattttgatggacgtttgtaaaattca 157  Q
    |||| |||||| ||| ||||||||||||||||||||||| |||||||    
T  13999936 gagcatttggacggaaggactattttgatggacgtttgttaaattca 13999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 37646477 - 37646530
Alignment:
Q  150 aaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
    ||||||||||||||||||||||||| |||| ||||  | ||| |||||||||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactga 37646530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 15806227 - 15806187
Alignment:
Q  125 agggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||||| |||||| ||||||||| |||||||||||||||    
T  15806227 agggactaatttgattgacgtttgttaaattcagggactaa 15806187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 4e-60; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 42980846 - 42980677
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  42980846 tagtctttgtacacgtgactgtcttgttgacacgtgtacaggacaacacaacatgcaagaggacacatcatcaccactaacagagcttttggacggaggg 42980747  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttg 198  Q
    || |||||||||||||| ||||||||| |||||||||||||| ||| || ||||||||  ||||||||||    
T  42980746 accattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggacaaatttg 42980677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 41761659 - 41761814
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||  |||||||||| ||||||    
T  41761659 tagtccttgtacacgtgactgccttgttgacacgtgtacatgagaacacagcatgcaagaggacacatcatcaccactaacgaagcttttggacggaggg 41761758  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  41761759 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatt 41761814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 48813998 - 48813786
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||    
T  48813998 tagtccttgtacacgtggctgccttgttaacacatgtacatgacaacacaacatgcaagaggacacatcatcaccaccaacagagcttttggacgaaggg 48813899  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| | ||||||||||| |||||||| |||||  ||||||||||  || ||||||| ||||       |||||||||| |||||||    
T  48813898 accattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctga-tttttgaaaattcaaggacgaatt 48813800  T
Q  229 tgaggtattagtcc 242  Q
    ||||||||||||||    
T  48813799 tgaggtattagtcc 48813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 41781750 - 41781530
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||| ||||||||| || |||  ||||||||||| ||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  41781750 tagttcttgtacacatggctgctttgttgacacacgtacatgacaacacatcatgcaagaggacacatcatcatcactaacggagcttttggacggaggg 41781651  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||||||| || |||||||||||||||||||||| |||||  ||||||||||  |||||||||||| ||       ||||||||||||| ||||    
T  41781650 accattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggacaaatttgaccga-ttttttaaaattcaagaacaaatt 41781552  T
Q  229 tgaggtattagtcctaattata 250  Q
    ||||||||||||| | ||||||    
T  41781551 tgaggtattagtcattattata 41781530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 35404358 - 35404526
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||| ||| ||    
T  35404358 tagtcattgtacacgtggctgtcttgttgacacatgtacatgacaacacaacatggaagaggacacgtcatcaccactaacggagcttttggacggatgg 35404457  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaattt 197  Q
    || |||||| ||||||| ||||||||||||||| |||||| ||||| ||||||||| || ||| |||||    
T  35404458 accattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaattt 35404526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 51012136 - 51011979
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||| |||||| ||||||| |||||||||||||||||| ||||||    
T  51012136 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaag-ggacacgtcatcactactaacagagcttttggacggaggg 51012038  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaa 187  Q
    || |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  51012037 accattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaa 51011979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 48646660 - 48646828
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||| ||    
T  48646660 tagtccttgtacacgtggttgccttgttgacacgtgtaaatgacaacacaacatgcaagaggacacatcatcaccactaacgaagcttttggacggaagg 48646759  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaattt 197  Q
    || ||||||||| | || |||||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  48646760 accattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacgaattt 48646828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 49523335 - 49523178
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||| |  |||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||||| ||  ||||||| ||||||    
T  49523335 tagtctttgtacacgcggttgtcttgttgacacgtgtacaagacaacacaacatgcaagaaggcacatcatcaccactaacggattttttggacggaggg 49523236  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  49523235 accattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 49523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 29 - 238
Target Start/End: Complemental strand, 11601881 - 11601674
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||| ||||||||| || ||| ||||||| ||||||||||||||||||  |||||||||||||||| || |||||||  ||||| ||||  |||||    
T  11601881 tagtccttatacacgtgattgccttcttgacacgtgtacatgacaacacaacacgcaagaggacacatcagcatcactaacgaagcttgtggacagaggg 11601782  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||  ||||||||    || ||||||||||||       ||||||||||||||||||    
T  11601781 actattttgatggacgtctgtaaaattcagggact-aatatatattttgcaaaatttggggataaatttgactga-tttttgaaaattcaagaacgaatt 11601684  T
Q  229 tgaggtatta 238  Q
    | ||||||||    
T  11601683 ttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 2693166 - 2693320
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||| ||||||| |||||| ||||||||| | ||||||| |||||||||||| ||||||  || ||| |||| ||| ||    
T  2693166 tagtccttgtacacgtggctgccttcttgacacgtgtacaggacaacacagcatgcaagatgacacatcatcatcactaatggaacttatggacggatgg 2693265  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || |||||||||||| ||| |||||||||  ||||||||||||||| |||||||||    
T  2693266 accattttgatggacattt-taaaattcaaagactaaatagatatttcgcaaaatt 2693320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 43519635 - 43519423
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||| || ||| |||| |||||| ||| |||||||||| | | ||||||| | ||||||||||| | |||  || |||||||| ||||||    
T  43519635 tagtccttgtacacatggctgacttgctgacacgtgtgcatgacaacaaagcatgcaagaagccacatcatcactattaatggaccttttggacggaggg 43519536  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||   |||||||||||||||||||||||||||||||| | |||||| |||||||||||  ||| || ||| | ||       |||||||||| |||||||    
T  43519535 acggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga-tttttcaaaattcaaggacgaatt 43519437  T
Q  229 tgaggtattagtcc 242  Q
    ||||||||||||||    
T  43519436 tgaggtattagtcc 43519423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 184
Target Start/End: Original strand, 52868091 - 52868217
Alignment:
Q  58 acacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattca 157  Q
    |||| |||||||||||||||| | ||||||||||||| ||||| |||||||| ||||||||||| | || ||| |||||||| | ||| ||| |||||||    
T  52868091 acacgtgtacatgacaacacagcatgcaagaggacacgtcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattca 52868190  T
Q  158 gggactaaatagatattacgcaaaatt 184  Q
    | ||||||||||||||| |||||||||    
T  52868191 gagactaaatagatatttcgcaaaatt 52868217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 26296809 - 26296940
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||| ||||| ||  ||||| ||||| |||||| |||||||  || ||||||| ||||  |||||| |||||||||| | ||||||||||  |||    
T  26296809 gtccttgtatacgtggcttccttgtagacacgtgtacaagacaacatgacatgcaagacgacagctcatcaacactaacagatcatttggatggaatgac 26296908  T
Q  131 tattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||||||||||||||  ||||||||||||    
T  26296909 tattttgatggacgtttgacaaattcagggac 26296940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 11255853 - 11255927
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcacc 103  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | || |||||||||||||||||||    
T  11255853 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgtaagaggacacatcatcacc 11255927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 27382328 - 27382195
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| || |||||||||||| |||||| |||| ||  || |||| || || |  ||| || |||||||||| | |||||| | |  |    
T  27382328 tagtccttgtacacgtggctttcttgttgacacgtgtacaagacaccatgacatgcaggacgaaagctcagcagcactaacagaacatttggacgaaatg 27382229  T
Q  129 actattttgatggacgtttgtaaaattcagggac 162  Q
    |||||||||||||||||||||  |||||||||||    
T  27382228 actattttgatggacgtttgttgaattcagggac 27382195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 50131373 - 50131240
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||  ||||| ||||| |||||| |||||||  || || | || || |  ||| || |||||   |||| |||||| |||  |    
T  50131373 tagtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgtaggacgatagctcagcagcactactggagcatttggacggaatg 50131274  T
Q  129 actattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||||||||||||||||| ||||||||||||    
T  50131273 actattttgatggacgtttgtcaaattcagggac 50131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 48645336 - 48645255
Alignment:
Q  159 ggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||||||| |||||||||||  ||| |||||||||||       |||||||||| ||||||||||||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactga-tttttgaaaattcaaggacgaatttgaggtattagtc 48645255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 44972548 - 44972489
Alignment:
Q  103 cactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||| |||| |||||| ||| ||||||||||||||||||||||| ||||| ||||||    
T  44972548 cactaacggagcatttggacggaaggactattttgatggacgtttgttaaatttagggac 44972489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 13450970 - 13451028
Alignment:
Q  106 taacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggacta 164  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||  ||||||| ||||||    
T  13450970 taacagagcatttggatggagggaccattttgatggacgtctgataaattcaaggacta 13451028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 20493916 - 20493880
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaa 187  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaa 20493880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 39859142 - 39859353
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  39859142 tagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttggacggaggg 39859241  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||| |||||| ||||||||||| |||||||||||||||| |||||||||||  ||| |||||| | ||       |||||||||| |||||||    
T  39859242 accattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccga-ttttttaaaattcaaggacgaatt 39859340  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  39859341 tgaggtattagtc 39859353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 45359547 - 45359376
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||| |||| || |||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  45359547 tagtccttgtacacgtgactgcctttttgaaacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttggatggaggg 45359448  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    || |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||  |||||||    
T  45359447 accattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgac 45359376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 199
Target Start/End: Original strand, 35693283 - 35693455
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  35693283 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacactacatgcaagaggacacatcatcaccactaacagaacttttggatggaggg 35693382  T
Q  129 actattttgatggacgtttgtaaaattcagggactaa--atagatattacgcaaaattcaatgacaaatttga 199  Q
    || |||||||||||||| |||||||||||||||||||  | ||||||| |||||||||||| ||| |||||||    
T  35693383 accattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaaggacgaatttga 35693455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 198
Target Start/End: Complemental strand, 13168334 - 13168162
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||| |||||||||||||| ||||||||||| ||| ||    
T  13168334 tagtccttgtacacgtgtctgtcttgttgacacgtgtacatgacaacacagcatgcaagatgacacgtcatcaccactaacggagcttttggacggatgg 13168235  T
Q  129 actattttgatggacgtttgtaaaattc---agggactaaatagatattacgcaaaattcaatgacaaatttg 198  Q
    || |||||||||||||| ||||||||||   |||||||||||||||||| |||||||||||| ||| ||||||    
T  13168234 accattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacgaatttg 13168162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 47386122 - 47386333
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||||| ||||||||||||||||||| ||||||||||| |||  |    
T  47386122 tagtccttgtacacgtggctgccttgttgacacttgtacaggacaacacatcatgcaagagaacacatcatcaccactaacggagcttttggacggaatg 47386221  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||| || ||||||||| ||||| |||||||||||| ||| |||||||||||       |||||| ||| |||||||    
T  47386222 accattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacgaatttgactga-ttttttaaaattaaaggacgaatt 47386320  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  47386321 tgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 6602546 - 6602389
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| || |||||||| |||||||||||||||| | ||||| ||||||  |||||||||||||| ||||||||||| ||||||    
T  6602546 tagtccttgtacacgtggctgcctggttgacacgtgtacatgacaacacagcatgcaaaaggacatgtcatcaccactaacggagcttttggacggaggg 6602447  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  6602446 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 6602389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 48852260 - 48852415
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||||||||  ||| |    
T  48852260 tagttcttgtacacgtgactgtcttgttgacacatgtacaagacaacacatcatgtaagaggacacatcatcaccactaacagagcttttggaccgagag 48852359  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || |||||||||||||| ||||||||||| ||| ||||||||||||  ||||||||    
T  48852360 accattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 37 - 186
Target Start/End: Original strand, 24228330 - 24228479
Alignment:
Q  37 gtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactatttt 136  Q
    ||||||||| ||| ||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||  ||||||||||| | |||||| |||||    
T  24228330 gtacacgtggctgccttgttgacacgtgtatatgacaacacaacatgcaagaggacacatcatcaccactaatggagcttttggacgaagggaccatttt 24228429  T
Q  137 gatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  24228430 gatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattca 24228479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 30940338 - 30940493
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||  |||||| ||||||||| | ||||| |||||||||||||||||||||| ||||||||||| |||| |    
T  30940338 tagtccttgtacacgtggctgccttgttgacatgtgtacaggacaacacagcatgcaataggacacatcatcaccactaacggagcttttggacggagag 30940437  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || ||||||||| ||||||||||||||||||||||||||||||||| || ||||||    
T  30940438 accattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaatt 30940493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 38474057 - 38474227
Alignment:
Q  30 agtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggga 129  Q
    |||||||| ||||||| ||||||||||||||| |||||| ||||||||| | | |||||||||||||||||||||||||| ||||||||||| ||| |||    
T  38474057 agtccttgcacacgtggctgtcttgttgacacgtgtacaggacaacacagcatacaagaggacacatcatcaccactaacggagcttttggacggatgga 38474156  T
Q  130 ctattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    | |||||||| | ||| ||||||||||| |||||||||||||||| |||||||||||  ||| ||||||||    
T  38474157 ccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgac 38474227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 34776828 - 34776985
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||| |||||||| |||  || ||||||| ||| |||||||||||||||||| ||||||||||||| |||||| ||||||| ||| ||||||| ||||||    
T  34776828 tagttcttgtacatgtggttgccttgttggcacgtgtacatgacaacacaacatgcaagaggacacgtcatcatcactaacggagtttttggacggaggg 34776927  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  34776928 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 34776985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 82 - 241
Target Start/End: Original strand, 37115492 - 37115650
Alignment:
Q  82 tgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaa 181  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||  |||||    
T  37115492 tgcaagaggacacatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaa 37115591  T
Q  182 attcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||   || |||||||||||       |||||||||  ||||||||||||||||||||    
T  37115592 attcaggaacgaatttgactga-ttttttaaaattcaatgacgaatttgaggtattagtc 37115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 29996427 - 29996638
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||||||  ||| |||||| |||||||||||||| ||| || |||| | ||| ||||||| | |||| || |||||||||||||||    
T  29996427 tagtccttgtacacgtgactgatttgctgacacgtgtacatgacaacaaaacatgtaagaagccacgtcatcactattaacggaccttttggatggaggg 29996526  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || | |||||||||||| ||||||||||||||| ||| | |||||| |||||||||||  |||||| ||||| ||       |||||||||| |||||||    
T  29996527 acgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccga-tttttcaaaattcaaggacgaatt 29996625  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  29996626 tgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 184
Target Start/End: Original strand, 37796103 - 37796249
Alignment:
Q  38 tacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttg 137  Q
    |||||||| ||| ||| ||||||| |||| | ||||||||||| ||||||||||||||||| || | ||||| |||||| |||| |||||||||||||||    
T  37796103 tacacgtggctgccttcttgacacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttg 37796202  T
Q  138 atggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||    
T  37796203 atggacgtccgtaaaattcagggactaaatagatatttcgcaaaatt 37796249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 27665978 - 27666189
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||| |||||| |||||| ||||||| | | ||||||| | ||||||||||| | |||| |  |||||||| ||||||    
T  27665978 tagtccttgtacacgtggctgacttgctgacacgtgtacaggacaacaaagcatgcaagaagccacatcatcactattaacgggccttttggacggaggg 27666077  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    ||   |||||||||||||||||||||||||||||||| | |||||| |||||||||||  ||| || ||| | ||       |||||||||| |||||||    
T  27666078 acggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccga-tttttcaaaattcaaggacgaatt 27666176  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  27666177 tgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 56532 - 56384
Alignment:
Q  38 tacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttg 137  Q
    |||||||| ||| |||| |||||| |||||| ||||||||||| ||||||| | ||||||||||| |||||||||  ||||||| ||||||| |   |||    
T  56532 tacacgtggctgacttgctgacacgtgtacaagacaacacaacatgcaagaagccacatcatcactactaacagacattttggacggagggagtgaattg 56433  T
Q  138 atggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    |||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  56432 atggacgtctgtaaaattcagggactaatttgatatttcgcaaaattca 56384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 23906174 - 23906307
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||| |||  || ||||||||||| |||||| ||||||||| | ||||||||||||| ||||| ||| |||| ||||||||||| ||||||    
T  23906174 tagtccttgtacaagtgtttgccttgttgacacgtgtacaggacaacacagcatgcaagaggacacgtcatcgccattaacggagcttttggacggaggg 23906273  T
Q  129 actattttgatggacgtttgtaaaattcagggac 162  Q
    || |||||||||||||  ||||||||| ||||||    
T  23906274 accattttgatggacgactgtaaaatttagggac 23906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 46439443 - 46439546
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||| |||||||||| ||| | ||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  46439443 tagtccatgtacacgtggctgccctgttgacacgtgtacaagacaacacaacatgcaagaggacacatcgtcaccactaacggagcttttggacggaggg 46439542  T
Q  129 acta 132  Q
    ||||    
T  46439543 acta 46439546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 33038711 - 33038865
Alignment:
Q  30 agtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggga 129  Q
    |||||||| |||| || ||  ||| ||||||| |||| | ||||||||||| |||| || |||| |||| ||   ||||||||||  ||||| |||||||    
T  33038711 agtccttgaacacatggcttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcctaacagagcacttggacggaggga 33038810  T
Q  130 ctattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    |  ||||||||||||| || |||||||||||||||| | |||||| |||| ||||    
T  33038811 cctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataatt 33038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 13169683 - 13169772
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||| | ||       |||||||||| ||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccga-tttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 20478192 - 20478096
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||  |||||||||||| || |||||||||||||||| | |||||| || ||||||||    
T  20478192 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattca 20478096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 1546498 - 1546343
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||  ||| ||||||| | || | ||||||||||| |||| |  | ||  ||| || ||||||| || |||||||| ||||||    
T  1546498 tagtccttgtacacgtgacttcctttttgacacgtatataagacaacacaacatgcagggagccagctcagcatcactaacggaccttttggacggaggg 1546399  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || ||||||||||||||  |  ||||||| ||||  ||| |||||| |||||||||    
T  1546398 accattttgatggacgtgagagaaattcaaggacgcaattgatatttcgcaaaatt 1546343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 6056975 - 6056844
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||| ||||| ||  ||||| ||||| ||||||  ||||||  || |||| || ||||  ||| || ||||||| |||| |||||| ||| ||||    
T  6056975 gtccttgtagacgtggcttccttgtagacacgtgtacaatacaacaggacatgcaggacgacagctcagcagcactaacggagcatttggacggaaggac 6056876  T
Q  131 tattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||||||||||||||| ||||||| ||||    
T  6056875 tattttgatggacgtttgttaaattcaaggac 6056844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 31913678 - 31913547
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||||||| ||  ||||| ||||| ||| || |||||||   | |||| || ||||  ||| || ||||||| |||| |||||| ||| | ||    
T  31913678 gtccttgtacacgtggcttccttgtagacacgtgtgcaagacaacaagccatgcaggacgacaactcagcaacactaacggagcatttggacggaagaac 31913579  T
Q  131 tattttgatggacgtttgtaaaattcagggac 162  Q
    |||||||||||||||||||  |||||||||||    
T  31913578 tattttgatggacgtttgttgaattcagggac 31913547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 48227911 - 48227990
Alignment:
Q  121 atggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    |||||||||||  |||||| ||| |||   |||||||||||| ||||||||||| |||||||||||| ||| ||||||||    
T  48227911 atggagggactgatttgattgacattttgtaaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgac 48227990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 31915047 - 31915084
Alignment:
Q  125 agggactattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  31915047 agggactattttgatggacgtttgttaaattcagggac 31915084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 39857734 - 39857648
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtatta 238  Q
    |||||| ||||||||||||||||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 80
Target Start/End: Complemental strand, 48704389 - 48704340
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaac 80  Q
    ||||||||||||||||||  ||||||||||| |||||| |||||||||||    
T  48704389 gtccttgtacacgtgacttccttgttgacacgtgtacacgacaacacaac 48704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 23962441 - 23962377
Alignment:
Q  103 cactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaat 167  Q
    ||||||| |||| ||| || ||| ||||||||||||| ||||||||| |||||||||||| ||||    
T  23962441 cactaacggagcattttgacggaaggactattttgattgacgtttgttaaattcagggacaaaat 23962377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 11682987 - 11682876
Alignment:
Q  34 cttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactat 133  Q
    |||||| ||||| ||| |||| |||||  ||||||  ||| |||| | | ||||| ||||| ||||||||||||||||||   ||||| ||||||||||     
T  11682987 cttgtatacgtggctgacttgatgacatgtgtacaacacatcacagcattcaagaagacacctcatcaccactaacagagagattggacggagggactaa 11682888  T
Q  134 tttgatggacgt 145  Q
     |||||||||||    
T  11682887 attgatggacgt 11682876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 6605397 - 6605446
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    ||||||||||||||||||| |||| |||||||||||   |||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgac 6605446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 46996617 - 46996770
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||| ||||||| ||  ||| ||| |||  ||||| ||||||||| | ||||||  |||| |||| || | ||||| ||||  ||||| ||||||||    
T  46996617 gtccttgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcatcgctaacggagcacttggacggagggac 46996716  T
Q  131 tattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
      ||||||||||||| ||  |||||||| |||||| | |||||| |||| ||||    
T  46996717 ctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataatt 46996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 13018158 - 13018102
Alignment:
Q  117 ttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatat 173  Q
    ||||| |||||||| |||||||||||||| ||| |||||||| ||  ||||||||||    
T  13018158 ttggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatat 13018102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 29 - 203
Target Start/End: Complemental strand, 10568610 - 10568436
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  10568610 tagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaaaaggacacatcatcaccactaacggagcttttggacggaggg 10568511  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||| ||| |||||||| ||| |||||||||||    
T  10568510 actattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactga 10568436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 20523577 - 20523406
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||  | ||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  20523577 tagtccttgtacacgtggctgccttgttgacacgtgtacaggacaacacggcatgcaagaagacacatcatcaccactaacagaacttttggacggaggg 20523478  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  20523477 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgac 20523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 9398871 - 9398714
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||| | |||||||||||||||||||| || |||||||| ||||||    
T  9398871 tagtccttgtacacgtggctgtcttgttgacacgtgtacaggacaacacaacatgcaaaatgacacatcatcaccactaacggaacttttggacggaggg 9398772  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || ||||||||| |||| | |||||||||||||||||||||||||| |||||||||||    
T  9398771 accattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattca 9398714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 11355433 - 11355223
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  11355433 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaccggagcttttggacggaggg 11355334  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||| ||| ||| ||||||||||||||| | |||||||||| |  |||||||| |||| |||||||| ||       |||||||||| |||||||    
T  11355333 accattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaatttgaccga-ttttttaaaattcaaggacgaatt 11355235  T
Q  229 tgaggtattagt 240  Q
    ||||||||||||    
T  11355234 tgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 6899696 - 6899485
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||||| ||||||||||| | ||||    
T  6899696 tagtccttgtacacgtggttgccttgttgacacgtgtacatgataacacaacatgcaagaggacacatcatcaacactaacggagcttttggacgaaggg 6899597  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || ||||||||||| || ||||||||| |||||||||||||||||| | ||||||| |  ||| |||||||||||       |||||||||| || ||||    
T  6899596 accattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactga-tttttgaaaattcaaggacaaatt 6899498  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  6899497 tgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 7049968 - 7049835
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  7049968 tagtccttgtacacgtggatgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccacgaacggagcttttggacggaggg 7049869  T
Q  129 actattttgatggacgtttgtaaaattcagggac 162  Q
    || |||||||||||||| ||||||||||||||||    
T  7049868 accattttgatggacgtctgtaaaattcagggac 7049835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 36 - 200
Target Start/End: Original strand, 32439012 - 32439175
Alignment:
Q  36 tgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattt 135  Q
    |||||||||| ||| ||||||||||| |||||| ||||||||| | |||||| |||||| ||||||| ||||||||| |||||||| |||||||| ||||    
T  32439012 tgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaag-ggacacgtcatcactactaacagatcttttggacggagggaccattt 32439110  T
Q  136 tgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||  ||| ||||||||    
T  32439111 tgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgac 32439175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 32517088 - 32516877
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||| |||||||| ||| |||||| |||| ||||||||||| |||| | |||||||| |||| |||||||||||||| ||||||||||| ||||||    
T  32517088 tagtccttatacacgtggctgccttgttaacacgtgtacatgacagcacatcatgcaagagaacacgtcatcaccactaacggagcttttggacggaggg 32516989  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||||| || |||||||| ||||  | ||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  32516988 acaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacgaatt 32516890  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  32516889 tgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 13613495 - 13613706
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||| || ||| |||| |||||| |||| | ||||||||| | || |||| | |||||||||||||||||  || |||||||| ||||||    
T  13613495 tagtccttgtacacatggctgacttgctgacacgtgtataggacaacacagcatgaaagaagccacatcatcaccactaatggaccttttggacggaggg 13613594  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    |||| |||||||||||| ||||||||||||||||||| | |||||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  13613595 actaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccga-tttttcaaaattcaaggacgaatt 13613693  T
Q  229 tgaggtattagtc 241  Q
    | |||||||||||    
T  13613694 taaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 7372927 - 7373042
Alignment:
Q  85 aagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||||| ||||||||||||||||||  ||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||| ||||| |||||||||    
T  7372927 aagagcacacatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaatt 7373026  T
Q  185 caatgacaaatttgac 200  Q
    ||  ||| ||||||||    
T  7373027 cagggacgaatttgac 7373042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 14338390 - 14338543
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||||||| ||  ||||||||||| |||||| ||||||||| | ||||| |||| ||||||||| || |||| ||||||||| | ||||||||    
T  14338390 gtccttgtacacgtggcttccttgttgacacgtgtacaggacaacacatcatgcaacaggatacatcatcatcagtaacggagcttttgaacggagggac 14338489  T
Q  131 tattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
     |||||||||||||| ||| |||||||||||  || |||| ||| |||||||||    
T  14338490 cattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatt 14338543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 166
Target Start/End: Complemental strand, 30891333 - 30891198
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||||||| ||   |||||||||| |||||| ||||| || || |||| |  |||| || || | |||||| ||||| |||||| ||||||||    
T  30891333 gtccttgtacacgtggcttgtttgttgacacgtgtacaagacaagactacatgcagggtgacaaattataagcactaatagagcatttggacggagggac 30891234  T
Q  131 tattttgatggacgtttgtaaaattcagggactaaa 166  Q
    || |||| ||||||| ||  ||||||||||||||||    
T  30891233 tactttgttggacgtctgacaaattcagggactaaa 30891198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 25172024 - 25172154
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||| ||||||  ||||||||||| |||||| |||||||  || |||| ||  |||  ||| ||  |||||  |||| |||||| ||| ||||    
T  25172024 gtccttgtacatgtgacttccttgttgacacgtgtacaagacaacatgacatgcaggacaacaactcaacaatactaatggagcatttggacggaaggac 25172123  T
Q  131 tattttgatggacgtttgtaaaattcaggga 161  Q
    |||||| |||||||||||| |||||||||||    
T  25172124 tatttttatggacgtttgttaaattcaggga 25172154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 3456898 - 3456802
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    |||| |||||||| | |||| ||  ||||||| |||||||||  |||||||||||| || |||||||||||||||| | |||||| || ||||||||    
T  3456898 gacatatcatcactattaacggatattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattca 3456802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    |||||| |||||||| |||||||| |||||||||||| ||  |||||||||||       |||||||||| ||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactga-tttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 31209075 - 31208988
Alignment:
Q  26 aaatagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagag 113  Q
    |||| ||||||||||||||| ||| |||| |||||||||||||  ||| |||||  |||| || | ||| ||||||||||||||||||    
T  31209075 aaatggtccttgtacacgtggctgacttgatgacacatgtacaacacatcacaatatgcaggaagtcacctcatcaccactaacagag 31208988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 11163940 - 11163875
Alignment:
Q  100 caccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||||||| | || |||||| ||| |||||| |||||| ||||||||| |||||||||||||||    
T  11163940 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 11163875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 3018380 - 3018500
Alignment:
Q  64 gtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggact 163  Q
    ||||| ||||||||| | ||||||| || | |||| ||   ||||| ||||  ||||||||||||||  ||||||||||||| ||  |||||||||||||    
T  3018380 gtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttggatggagggacctttttgatggacgtctgacaaattcagggact 3018479  T
Q  164 aaatagatattacgcaaaatt 184  Q
    || | |||||| |||| ||||    
T  3018480 aagttgatatttcgcataatt 3018500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 32455865 - 32455961
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    ||||||||||||  | |||| ||  ||||||| |||||||||  |||||||||||| || ||||||||| |||||| | |||||| || ||||||||    
T  32455865 gacacatcatcattattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattca 32455961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 7e-56; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 2869790 - 2869579
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||| ||| ||| ||||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  2869790 tagtccttgtacatgtggctgccttgttgacacgtgtacaggacaacacatcatgcaagatgacacatcatcaccactaacagagcttttggacggaggg 2869691  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||| || ||||||||||||||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  2869690 accattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccga-tttttgaaaattcaaggacgaatt 2869592  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  2869591 tgaggtattagtc 2869579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 3013383 - 3013600
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||  | |||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  3013383 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacggcatgcaagaggatacatcatcaccactaacggagcttttggacggaggg 3013482  T
Q  129 actattttg------atggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaa 222  Q
    |||||||||      |||||||| |||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||       |||||||||| |    
T  3013483 actattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttgactga-tgttttaaaattcaagga 3013581  T
Q  223 cgaatttgaggtattagtc 241  Q
    |||||||||||||||||||    
T  3013582 cgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 30 - 241
Target Start/End: Complemental strand, 27087492 - 27087283
Alignment:
Q  30 agtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggga 129  Q
    |||||||||||||||| ||| ||||||||||| |||||| ||||||||| | |||||| ||||||||||||||||||||| ||||||||||| ||| ||     
T  27087492 agtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-ggacacatcatcaccactaacggagcttttggacggatggg 27087394  T
Q  130 ctattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaattt 229  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||| ||       |||||| ||| ||||||||    
T  27087393 ccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccga-ttttttaaaatttaaggacgaattt 27087295  T
Q  230 gaggtattagtc 241  Q
    ||||||||||||    
T  27087294 gaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 37344553 - 37344340
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||| |||||||| ||| ||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  37344553 tagtccttatacacgtggctgccttgttgacacgtgtacatgacaacacatcatgcaagaggacacgtcatcaccactaacggagcttttggacggaggg 37344454  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||  |||||||||| |||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  37344453 accattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacgaatt 37344355  T
Q  229 tgaggtattagtcct 243  Q
    |||||||||||||||    
T  37344354 tgaggtattagtcct 37344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 25278281 - 25278492
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||| |||||||| ||| ||||||||||| ||||||||||| |||| | ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  25278281 tagtccttatacacgtggctgccttgttgacacgtgtacatgacagcacatcatgcaagaggacacgtcatcaccactaacggagcttttggacggaggg 25278380  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||||| ||||||||||| |||| |||||||||||  ||| |||||||| ||       |||||||||| |||||||    
T  25278381 accattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccga-ttttttaaaattcaaggacgaatt 25278479  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  25278480 tgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 31238408 - 31238619
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||| | || |||||||||| |||||||||||||| |||||||||||  || ||    
T  31238408 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagcatggaagaggacacgtcatcaccactaacggagcttttggacagatgg 31238507  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||  |||||||||| | ||       |||||||||| || ||||    
T  31238508 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccga-ttttttaaaattcaaggacaaatt 31238606  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  31238607 tgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 29 - 174
Target Start/End: Original strand, 6818591 - 6818736
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  6818591 tagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaacggagcttttggacggaggg 6818690  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    || |||||||||||||| ||||||||||||||||||||||||||||    
T  6818691 accattttgatggacgtctgtaaaattcagggactaaatagatatt 6818736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 50556010 - 50556184
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||||| | ||||||| |||||  ||||||||||||| ||||||||||| ||||||    
T  50556010 tagtccttgtacacgtgactcccttgttgacacgtgtacatgacaacacagcatgcaagatgacacgccatcaccactaacggagcttttggacggaggg 50556109  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactga 203  Q
    || |||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||  ||| |||||||||||    
T  50556110 accattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatttgactga 50556184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 4855880 - 4856090
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||| ||||||||||| |||||| ||||||||||| |||||| |||||| ||||||||| |||| ||||||||||| ||||||    
T  4855880 tagtccttgtacacgtgactgccttgttgacacgtgtacaagacaacacaacatgcaag-ggacacgtcatcaccattaacggagcttttggacggaggg 4855978  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||| ||||||||||||||||||| | |||||| |||||||||||  |||  ||||| | ||       |||||||||| |||||||    
T  4855979 accattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccga-ttttttaaaattcaaggacgaatt 4856077  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  4856078 tgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 15104652 - 15104495
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||| ||||||| |||||| ||||||||| | ||||||| |||||||||||||||||||  ||||||||||| ||| ||    
T  15104652 tagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacagcatgcaagaagacacatcatcaccactaatggagcttttggacggaagg 15104553  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  15104552 accattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 15104495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 51896118 - 51896239
Alignment:
Q  82 tgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaa 181  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  51896118 tgcaagaggacacatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaa 51896217  T
Q  182 attcaatgacaaatttgactga 203  Q
    |||||  |||||||||||||||    
T  51896218 attcagggacaaatttgactga 51896239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 34778052 - 34778262
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||  |||||| |||||| |||||||||||||| ||||||||||| ||||||    
T  34778052 tagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaatatgcaag-ggacacgtcatcaccactaacggagcttttggacggaggg 34778150  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||| | ||||||||||||||||||| | |||||| |||||||||||  |||  ||||| | ||       |||||||||| |||||||    
T  34778151 accattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccga-ttttttaaaattcaaggacgaatt 34778249  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  34778250 tgaggtattagtc 34778262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 46583469 - 46583680
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||| ||| |||| |||||| |||||||||||| | | | ||||||| | ||||||||||||| |||| || |||||||| ||||||    
T  46583469 tagtccttgtacacgtggctgacttgctgacacgtgtacatgacaagaaagcatgcaagaagccacatcatcaccattaacggaccttttggacggaggg 46583568  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || | |||||||||||| ||||||||||||||||||| | |||||| |||||||||||  |||||| ||||| ||       |||||||||| |||||||    
T  46583569 acaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccga-tttttcaaaattcaaggacgaatt 46583667  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  46583668 tgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 33602557 - 33602765
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||| || ||| |||| |||||| |||||| ||||||||||| ||||||| | ||||||||||  |||||| || |||||||| ||||||    
T  33602557 tagtccttgtacacatggctgacttgctgacacgtgtacaagacaacacaacatgcaagaagccacatcatcattactaacggaccttttggacggaggg 33602656  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    |||| ||||| |||||| ||||||||||||||||||| | |||||| | |||||||||  ||| || ||||| ||       |||||||||| |||||||    
T  33602657 actaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccga-tttttcaaaattcaaggacgaatt 33602755  T
Q  229 tgaggtatta 238  Q
    ||||||||||    
T  33602756 tgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 52643533 - 52643736
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| |||||||||||||||  |||||||||  |||||| ||||||||||   ||||||| ||||||||||||||||||| ||||||||||| |||| |    
T  52643533 tagtcattgtacacgtgactgcattgttgacatgtgtacaggacaacacaatacgcaagagaacacatcatcaccactaacggagcttttggacggagag 52643632  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || || |     ||||||| |||||||||||||||||||| ||||| |||||||||||  ||| ||||| |||||       |||||| ||| |||||||    
T  52643633 accatct-----gacgtttataaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactga-tttttaaaaatttaaggacgaatt 52643726  T
Q  229 tgaggtatta 238  Q
    ||||||||||    
T  52643727 tgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 51122116 - 51121961
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||||||||||||||||||  ||| ||||||| |||||||||||||||||| |||| |  | ||  ||| || |||||||||| |||||||| ||||||    
T  51122116 tagtccttgtacacgtgacttcctttttgacacgtgtacatgacaacacaacatgcagggagccagctcaacatcactaacagaccttttggacggaggg 51122017  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    || ||||||||||||||  |  |||||||||||| |||| ||||||  ||||||||    
T  51122016 accattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 51121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 43868823 - 43868697
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||||||||||  ||||| ||||| |||||| |||||||  || |||| || ||||  ||| || ||||||| |||| |||||| ||| ||||    
T  43868823 gtccttgtacacgtgacttccttgtagacacgtgtacaagacaacatgacatgcatgacgacaactcagcagcactaacggagcatttggacggaaggac 43868724  T
Q  131 tattttgatggacgtttgtaaaattca 157  Q
    |||||||||||| |||||| |||||||    
T  43868723 tattttgatggatgtttgttaaattca 43868697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 25278975 - 25279077
Alignment:
Q  138 atggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtatt 237  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| |   || |||||| ||||       |||||||||| ||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctga-tttttgaaaattcaaggacgaatttgaggtatt 25279073  T
Q  238 agtc 241  Q
    ||||    
T  25279074 agtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    ||||||||| |||||||||||||| |||||||||||  |||||||||||| ||       |||||||||| ||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccga-ttttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 47013056 - 47013152
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattca 186  Q
    |||||||||||||   |||| ||  ||||||| |||||||||  ||||||||||||||| |||||||||||||||| | |||||| || ||||||||    
T  47013056 gacacatcatcactgttaacggacattttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattca 47013152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 9121642 - 9121736
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaatt 184  Q
    ||||||||||||| | |||| ||  ||||||| |||||||||  |||||||||||| || |||||||||||||||| | |||||| || ||||||    
T  9121642 gacacatcatcactattaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatt 9121736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  160 gactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtattagtc 241  Q
    ||||||||||||||| |||||||||||  |||||||||||||||       |||||||||| | ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactga-tttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 26223706 - 26223587
Alignment:
Q  121 atggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaag 220  Q
    |||||||||||| |||||| ||| |||   ||||||||||||||| | |||||| |||||||||||  ||| || ||||| ||       ||||||||||    
T  26223706 atggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccga-tttttcaaaattcaag 26223608  T
Q  221 aacgaatttgaggtattagtc 241  Q
     ||||||||||||||||||||    
T  26223607 gacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 51894656 - 51894607
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgac 200  Q
    |||||||||||||||||| ||||| |||||||||||  ||||||||||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgac 51894607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 26225467 - 26225558
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttgga 121  Q
    ||||||||||||| ||| |||  |||||||||| |||||| ||||||||| | |||||| |||||| |||||| || |||  |||||||||||    
T  26225467 tagtccttgtacatgtggctgctttgttgacacgtgtacaagacaacacatcatgcaag-ggacacgtcatcagcattaatggagcttttgga 26225558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 36895458 - 36895578
Alignment:
Q  64 gtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggact 163  Q
    ||||| ||||||||||| ||||||| |||| |||| ||   ||||| ||||  ||||| | ||||||  ||||||||||||| ||  |||||||||||||    
T  36895458 gtacaagacaacacaacatgcaagacgacagatcagcatggctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggact 36895557  T
Q  164 aaatagatattacgcaaaatt 184  Q
    || | |||||| |||| ||||    
T  36895558 aagttgatatttcgcataatt 36895578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 37346021 - 37346055
Alignment:
Q  211 aaaattcaagaacgaatttgaggtattagtcctaa 245  Q
    |||||||||| ||||||||||||||||||||||||    
T  37346021 aaaattcaaggacgaatttgaggtattagtcctaa 37346055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 1442671 - 1442594
Alignment:
Q  90 gacacatcatcaccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaat 167  Q
    |||||||||||||   |||| ||  ||||||| |||||||||  |||||||||||| || ||||||||||||| ||||    
T  1442671 gacacatcatcactgttaacggacattttggacggagggactgatttgatggacgtctgcaaaattcagggacgaaat 1442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  151 aaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatttgaggtatta 238  Q
    |||||||| ||||||||||||||| |||||||||||   || |||||||||||       |||||| ||| |||||||||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactga-ttttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 1473 - 1329
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||||| ||||||||| | |||||| ||| || |||||||||||||| ||||||||||| ||||||    
T  1473 tagtccttgtacacgtggttgccttgttgacacgtgtacaagacaacacagcatgcaag-ggatacgtcatcaccactaacggagcttttggacggaggg 1375  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatatt 174  Q
    || |||||||||||||| ||||||||||||||||||||||||||||    
T  1374 accattttgatggacgtctgtaaaattcagggactaaatagatatt 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 8471 - 8258
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||| |||||||||||| ||| ||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||  |||||||||| ||| |     
T  8471 tagtacttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcttgcaagaggacacgtcatcaccactaacgaagcttttggacggatgt 8372  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || |||||||||||||  | ||||||||||||||||||||||||||  |||||||||||  || |||||| |  |       |||||||||| |||||||    
T  8371 accattttgatggacg--tataaaattcagggactaaatagatattttgcaaaattcaagaacgaatttggc-caattttttaaaattcaaggacgaatt 8275  T
Q  229 tgaggtattagtcctaa 245  Q
    ||||||||||| |||||    
T  8274 tgaggtattagacctaa 8258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 3505 - 3294
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||| ||| |||| ||||||||||||| ||||||| | | ||||||| | ||||||||||| | |||| || |||||||| ||||||    
T  3505 tagtctttgtacacgtggctgacttgctgacacatgtacaggacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggaggg 3406  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || | |||||||||||| ||||||||||||||||||| | |||||| |||||||||||  |||||| ||| | ||       |||||||||| |||||||    
T  3405 acgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccga-tttttcaaaattcaaggacgaatt 3307  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  3306 tgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 4677 - 4466
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    ||||| ||||||||||| ||| |||| ||||||||||||| ||||||| | | ||||||| | ||||||||||| | |||| || |||||||| ||||||    
T  4677 tagtctttgtacacgtggctgacttgctgacacatgtacaggacaacaaagcatgcaagaagccacatcatcactattaacggaccttttggacggaggg 4578  T
Q  129 actattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcaatgacaaatttgactgannnnnnnaaaattcaagaacgaatt 228  Q
    || | |||||||||||| ||||||||||||||||||| | |||||| |||||||||||  |||||| ||| | ||       |||||||||| |||||||    
T  4577 acgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccga-tttttcaaaattcaaggacgaatt 4479  T
Q  229 tgaggtattagtc 241  Q
    |||||||||||||    
T  4478 tgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 37415 - 37282
Alignment:
Q  29 tagtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggaggg 128  Q
    |||||||||||||||||  || ||||||||||| |||| | ||||||||||| | ||||| |||| |||||||||| |||| ||| ||||||||||||      
T  37415 tagtccttgtacacgtggttgccttgttgacacgtgtaaaggacaacacaacatacaagaagacatatcatcaccattaacggagtttttggatggagaa 37316  T
Q  129 actattttgatggacgtttgtaaaattcagggac 162  Q
    || |||||||| ||||| ||||||||||| ||||    
T  37315 accattttgatagacgtctgtaaaattcatggac 37282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 4668 - 4537
Alignment:
Q  31 gtccttgtacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggac 130  Q
    ||||||||||||||| ||  ||||| ||||| |||||| |||||||   | |||| || ||||  ||| || |||||||||| | |||||| ||| ||||    
T  4668 gtccttgtacacgtggcttccttgtagacacgtgtacaagacaacaagccatgcaggacgacaactcagcaacactaacagaacatttggacggaaggac 4569  T
Q  131 tattttgatggacgtttgtaaaattcagggac 162  Q
    |||||||||||||||||||  |||||||||||    
T  4568 tattttgatggacgtttgttgaattcagggac 4537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 6035 - 6072
Alignment:
Q  125 agggactattttgatggacgtttgtaaaattcagggac 162  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  6035 agggactaatttgatggacgtttgttaaattcagggac 6072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 36834 - 36899
Alignment:
Q  100 caccactaacagagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||||||| | || |||||| ||| |||||| |||||| ||||||||| |||||||||||||||    
T  36834 caccactaacggtgcatttggacggaaggactaatttgattgacgtttgttaaattcagggactaa 36899  T

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Target: scaffold0092; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 34714 - 34674
Alignment:
Q  125 agggactattttgatggacgtttgtaaaattcagggactaa 165  Q
    |||||||| |||||| ||||||||| |||||||||||||||    
T  34714 agggactaatttgattgacgtttgttaaattcagggactaa 34674  T

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Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 162
Target Start/End: Original strand, 30393 - 30517
Alignment:
Q  38 tacacgtgactgtcttgttgacacatgtacatgacaacacaacttgcaagaggacacatcatcaccactaacagagcttttggatggagggactattttg 137  Q
    |||||||||||  ||||| ||||| |||||| |||||||   | |||| || ||||  | | || ||||||| |||| |||||| ||| | |||||||||    
T  30393 tacacgtgacttccttgtagacacgtgtacaagacaacaagccatgcaggaagacaactaaacagcactaacggagcatttggacggaagaactattttg 30492  T
Q  138 atggacgtttgtaaaattcagggac 162  Q
    || ||||||||| ||||||||||||    
T  30493 attgacgtttgttaaattcagggac 30517  T

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Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 28456 - 28419
Alignment:
Q  125 agggactattttgatggacgtttgtaaaattcagggac 162  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  28456 agggactattttgattgacgtttgttaaattcagggac 28419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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