View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6850_low_6 (Length: 262)
Name: NF6850_low_6
Description: NF6850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6850_low_6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 74 - 262
Target Start/End: Original strand, 21586783 - 21586970
Alignment:
| Q |
74 |
aaaaacatttttatctttatcaaattaccttcctctccctaaaaataaacccattgatgaatcaaatcatttgccctaacattcccacacacaacnnnnn |
173 |
Q |
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| T |
21586783 |
aaaaacatttttatctttatcaaattaccgtcctctccctaaaaataaacccattgatgaatcaaatcatctgccctaacattcccacacacaac-aaaa |
21586881 |
T |
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| Q |
174 |
nncctcactctcattcatccatatatatctcactttctctatataaaccaaaactaactatcacacttttcactccttcaacaccaaac |
262 |
Q |
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| T |
21586882 |
aacctcactctcattcatccatatatatctcactttctctatataaaccaaaacaaactatcacacttttcactccttccactccaaac |
21586970 |
T |
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