View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6851_high_6 (Length: 337)
Name: NF6851_high_6
Description: NF6851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6851_high_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 19 - 337
Target Start/End: Original strand, 50008369 - 50008687
Alignment:
| Q |
19 |
gcatttccctcctagcttgaagtttctttgaaatctatgtagttgtctatcattcatgaaaatttcagcttttgtgctgagaatggtgcgcaactatatg |
118 |
Q |
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| T |
50008369 |
gcatttccctcctagcttgaagtttctttgaaatctatgtagttgtctatcattcatgaaaatttcagcttttgtgctgagaatggtgcgcaactatatg |
50008468 |
T |
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| Q |
119 |
gtggttgcccatggtgcacctgcatcgagccattcaaccctacaacttatactctggaccgtgcaaagtgcaaacaaacagttgaatagacattttcaaa |
218 |
Q |
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| T |
50008469 |
gtggttgcccatggtgcacctgcatcgagccattcaaccctacaacttatactctggaccgtgcaaagtgcaaacaaacagttgaatagacattttcaaa |
50008568 |
T |
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| Q |
219 |
tcgatgtaagatgatattctggtacggaatcattattttcagatgccacatcataaacaaggtgcaaatgaatgttactaatgaagacttgtttgtatca |
318 |
Q |
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| T |
50008569 |
tcgatgtaagatgatattctggtacggaatcattattttcagatgccacatcataaacaaggtgcaaatgaatgttactaatgaagacttgtttgtatca |
50008668 |
T |
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| Q |
319 |
atctgtgtccaccctcctc |
337 |
Q |
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| T |
50008669 |
atctgtgtcaaccctcctc |
50008687 |
T |
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