View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6851_high_9 (Length: 272)
Name: NF6851_high_9
Description: NF6851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6851_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 262
Target Start/End: Original strand, 6391030 - 6391276
Alignment:
| Q |
16 |
acatttctcttacaaaagaaagtttatgatttgaaaaccaaaaaagtctctaaagttgatgtcctaaagttgttcttcccctccacctatcattccaaaa |
115 |
Q |
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| T |
6391030 |
acatttctcttacaaaagaaagtttatgatttgaaaaccaaaaaagtctctgaagttgatgtcctaaagttgttcttcccctccacctatcattccaaaa |
6391129 |
T |
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| Q |
116 |
actagtcctcgaccaccaatcccaacttgcagcaccacttccgaattaaaccaatttaagcaacacaatcttctaatgataatgcattcttccaccaatg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6391130 |
actagtcctcgaccaccaatcccaacttgcagcaccacttccgaattaaaccaatttaagcaacacaatcttctaatgataatgcattcttccaccaatg |
6391229 |
T |
|
| Q |
216 |
ggatttcctccaacaacctacccactccctcggtatttctccaccag |
262 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
6391230 |
ggatttcctccaacatcctacccactccctcggtatttctccaccag |
6391276 |
T |
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