View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6853_high_11 (Length: 250)
Name: NF6853_high_11
Description: NF6853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6853_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 6193505 - 6193689
Alignment:
| Q |
12 |
gacatcacatttccaaccaaaattttaaaaaattagtatgcaattaatataaagcactcacatttaaatccgacaatttcatgtaaataaaaattaattg |
111 |
Q |
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| T |
6193505 |
gacaccacatttccaaccaaaattttaaaaaattagtatgtaattaatataaagcactcacatttaaatccgacaatttcatgtaaataaaaattaattg |
6193604 |
T |
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| Q |
112 |
tttgcttatatagacaagcaacagagtttagatgcggcttacatgttatattccctttgtctgtctttttattaattttcagtac |
196 |
Q |
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| T |
6193605 |
tttgcttatgtagacaagcaacagagtttagatgcggcttacatgttatattccctttgtctgtctttttattaattttcagtac |
6193689 |
T |
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