View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6854_high_30 (Length: 252)
Name: NF6854_high_30
Description: NF6854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6854_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 14484487 - 14484727
Alignment:
| Q |
1 |
aaatacaaatcatgttggctcatatcaaagtaataattctgacaatggttaaagcttactagacccaatagtgttgcgcgtgagagggtgtattgaagag |
100 |
Q |
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| T |
14484487 |
aaatacaaatcatgtgtgctcatatcaaagtaataattctgacaatggttaaagcttactagacccaatagtgttgcgcgtgagagggtgtattgaagag |
14484586 |
T |
|
| Q |
101 |
cttataaagtacactccttaccttacaaactggctttgtaaggataagtttggacaagaataaaatcttaataacagttgaatcatttcttgattagttt |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
14484587 |
cttatcaagtacactccttaccttacaaactggctttgtaaggataagtttggacaagaataaaatcttaataacagttgaatcatttcttgataagttt |
14484686 |
T |
|
| Q |
201 |
gtcagttcatatttttatggtggacaacatgcttgatgtcc |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
14484687 |
gtcagttcatatttttatggtggacaacatgcttgatgtcc |
14484727 |
T |
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