View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6854_low_42 (Length: 246)
Name: NF6854_low_42
Description: NF6854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6854_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 14484355 - 14484122
Alignment:
| Q |
1 |
aaacaacaatcaaagccttttccacaaggccggtttgggaacatgggcataacaacaccttaacatcatgtcattaatcgagtccagtgatgtagaccat |
100 |
Q |
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| T |
14484355 |
aaacaacaatcaaagccttttccacaaggcaggtttgggaacatgggcataacaacaccttaacatcatgtcattaatcgagtccagtgatgtagaccat |
14484256 |
T |
|
| Q |
101 |
ttagatctaaatatctctaactgattcaacctataattttccgtgatctcccttgattagat-ataaaagaaaagacaagaagtaccttgaccatgcagg |
199 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
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| T |
14484255 |
ttagatctaaatatctctaactgattcaacctat-attttccttgatctcccttgattagataaaaaaagaaaagacaagaagtaccttgaccatgcagg |
14484157 |
T |
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| Q |
200 |
attctatgtttgcctttcccacttctggatgatgt |
234 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
14484156 |
attctatgtttgcctttcccacttctggatgatgt |
14484122 |
T |
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