View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6855_low_13 (Length: 465)

Name: NF6855_low_13
Description: NF6855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6855_low_13
NF6855_low_13
[»] chr3 (100 HSPs)
chr3 (218-464)||(27331014-27331260)
chr3 (221-463)||(27126889-27127131)
chr3 (221-463)||(50610150-50610392)
chr3 (222-463)||(30042586-30042827)
chr3 (222-463)||(41697191-41697432)
chr3 (222-463)||(44842293-44842534)
chr3 (218-465)||(50547574-50547821)
chr3 (223-465)||(23020496-23020738)
chr3 (221-465)||(18410926-18411169)
chr3 (222-461)||(45170704-45170943)
chr3 (221-463)||(37219296-37219538)
chr3 (221-465)||(40906847-40907092)
chr3 (221-463)||(16464630-16464872)
chr3 (221-463)||(45052813-45053055)
chr3 (221-462)||(11122314-11122555)
chr3 (221-464)||(16009499-16009742)
chr3 (221-463)||(2218702-2218940)
chr3 (221-465)||(8850878-8851125)
chr3 (221-463)||(41102384-41102624)
chr3 (221-438)||(31312725-31312942)
chr3 (289-464)||(27324848-27325023)
chr3 (225-438)||(38236255-38236468)
chr3 (222-438)||(43339094-43339309)
chr3 (221-435)||(38697592-38697806)
chr3 (218-438)||(42826724-42826944)
chr3 (221-435)||(18762672-18762886)
chr3 (224-438)||(37181091-37181306)
chr3 (282-465)||(47912115-47912298)
chr3 (221-408)||(52746411-52746598)
chr3 (224-438)||(30362700-30362914)
chr3 (222-463)||(22605582-22605812)
chr3 (221-435)||(51721902-51722117)
chr3 (224-433)||(53777465-53777674)
chr3 (222-394)||(30439417-30439589)
chr3 (221-438)||(10826828-10827045)
chr3 (221-366)||(4232019-4232164)
chr3 (221-463)||(37786145-37786365)
chr3 (218-434)||(22428016-22428230)
chr3 (354-464)||(4232305-4232415)
chr3 (289-465)||(55411913-55412098)
chr3 (343-438)||(3891891-3891986)
chr3 (254-366)||(27321097-27321205)
chr3 (254-371)||(15084408-15084521)
chr3 (254-371)||(16008877-16008990)
chr3 (254-371)||(37219942-37220055)
chr3 (254-371)||(41101760-41101873)
chr3 (254-371)||(43338438-43338551)
chr3 (226-329)||(3891744-3891847)
chr3 (243-371)||(37785515-37785639)
chr3 (254-371)||(4232924-4233037)
chr3 (254-371)||(27126299-27126412)
chr3 (254-359)||(30043344-30043445)
chr3 (254-371)||(45170084-45170197)
chr3 (254-371)||(47912787-47912900)
chr3 (254-371)||(50548328-50548441)
chr3 (254-371)||(53778216-53778329)
chr3 (255-371)||(18410306-18410418)
chr3 (255-371)||(30440136-30440248)
chr3 (254-366)||(44843047-44843155)
chr3 (239-366)||(22428789-22428912)
chr3 (239-366)||(22732472-22732595)
chr3 (243-371)||(22604944-22605070)
chr3 (254-371)||(16464008-16464121)
chr3 (244-361)||(38235587-38235700)
chr3 (254-371)||(40423783-40423896)
chr3 (254-371)||(41697941-41698054)
chr3 (254-371)||(51722645-51722758)
chr3 (239-366)||(37181820-37181943)
chr3 (239-361)||(30363535-30363653)
chr3 (294-371)||(38696970-38697047)
chr3 (239-361)||(42826071-42826189)
chr3 (417-465)||(30439581-30439629)
chr3 (254-361)||(8851638-8851741)
chr3 (256-371)||(45053564-45053675)
chr3 (254-371)||(11121690-11121803)
chr3 (258-371)||(23019881-23019990)
chr3 (289-371)||(6175494-6175576)
chr3 (384-434)||(13213780-13213830)
chr3 (384-434)||(27321326-27321376)
chr3 (384-434)||(51722479-51722529)
chr3 (254-366)||(55411286-55411390)
chr3 (239-366)||(3892534-3892661)
chr3 (254-371)||(27325504-27325617)
chr3 (254-371)||(27331741-27331854)
chr3 (221-277)||(55412141-55412197)
chr3 (296-358)||(40495876-40495939)
chr3 (289-348)||(40906283-40906342)
chr3 (384-434)||(2218309-2218359)
chr3 (384-434)||(3892363-3892413)
chr3 (384-434)||(8851466-8851516)
chr3 (384-434)||(22605186-22605236)
chr3 (384-434)||(27126522-27126572)
chr3 (384-434)||(37181649-37181699)
chr3 (384-434)||(38697163-38697213)
chr3 (384-434)||(40424010-40424060)
chr3 (384-434)||(40906457-40906507)
chr3 (384-434)||(41697775-41697825)
chr3 (384-434)||(45170313-45170363)
chr3 (365-434)||(4232758-4232827)
chr3 (262-343)||(10827600-10827677)
[»] chr1 (52 HSPs)
chr1 (221-465)||(10773417-10773661)
chr1 (221-463)||(7153608-7153850)
chr1 (222-463)||(36308530-36308771)
chr1 (221-463)||(44511508-44511750)
chr1 (221-464)||(33705287-33705530)
chr1 (222-465)||(14487902-14488145)
chr1 (222-465)||(14536491-14536734)
chr1 (221-435)||(36731387-36731600)
chr1 (218-436)||(51087440-51087658)
chr1 (221-438)||(29521076-29521293)
chr1 (224-440)||(25656556-25656772)
chr1 (224-440)||(30302093-30302309)
chr1 (221-435)||(35955140-35955352)
chr1 (224-440)||(52405301-52405517)
chr1 (224-433)||(33005526-33005735)
chr1 (218-438)||(46118956-46119176)
chr1 (224-440)||(52406734-52406950)
chr1 (224-438)||(12768885-12769096)
chr1 (339-463)||(48128463-48128587)
chr1 (224-366)||(29648645-29648787)
chr1 (224-379)||(46463900-46464059)
chr1 (221-325)||(7556852-7556956)
chr1 (224-398)||(9135142-9135313)
chr1 (243-371)||(44512254-44512378)
chr1 (254-371)||(29521759-29521872)
chr1 (221-295)||(48128586-48128660)
chr1 (314-438)||(5327430-5327554)
chr1 (239-371)||(12768284-12768415)
chr1 (254-371)||(24781126-24781239)
chr1 (254-371)||(33704662-33704775)
chr1 (254-371)||(36307904-36308017)
chr1 (254-371)||(36730728-36730841)
chr1 (254-366)||(14488661-14488769)
chr1 (239-371)||(29649526-29649654)
chr1 (254-371)||(10772795-10772908)
chr1 (254-371)||(35954479-35954592)
chr1 (254-371)||(48127836-48127949)
chr1 (254-366)||(31030152-31030260)
chr1 (254-361)||(7152986-7153089)
chr1 (413-463)||(24781748-24781798)
chr1 (254-371)||(33006294-33006407)
chr1 (239-371)||(25655897-25656025)
chr1 (256-348)||(51086838-51086926)
chr1 (254-352)||(7556324-7556416)
chr1 (239-371)||(46118284-46118412)
chr1 (254-325)||(30838589-30838656)
chr1 (239-366)||(5326765-5326889)
chr1 (224-274)||(5327984-5328034)
chr1 (384-434)||(7153215-7153265)
chr1 (384-438)||(29648917-29648971)
chr1 (384-440)||(10773024-10773080)
chr1 (384-440)||(35954709-35954765)
[»] chr8 (70 HSPs)
chr8 (221-463)||(638139-638381)
chr8 (221-463)||(38060336-38060578)
chr8 (222-463)||(26949942-26950183)
chr8 (221-463)||(277468-277713)
chr8 (221-463)||(823942-824187)
chr8 (221-463)||(15882529-15882771)
chr8 (221-463)||(44256826-44257068)
chr8 (221-465)||(27913126-27913370)
chr8 (221-465)||(27959545-27959789)
chr8 (222-465)||(23346259-23346502)
chr8 (221-465)||(18956184-18956427)
chr8 (222-462)||(41545573-41545812)
chr8 (218-438)||(40303456-40303676)
chr8 (221-438)||(36192188-36192405)
chr8 (221-438)||(39858747-39858964)
chr8 (224-438)||(30555780-30555994)
chr8 (223-436)||(43694257-43694470)
chr8 (221-440)||(6095561-6095779)
chr8 (221-435)||(42736346-42736560)
chr8 (224-438)||(45408323-45408537)
chr8 (222-438)||(13140404-13140620)
chr8 (223-437)||(3850786-3851000)
chr8 (224-438)||(42646083-42646298)
chr8 (224-433)||(30111499-30111708)
chr8 (224-438)||(18088629-18088843)
chr8 (224-434)||(40617258-40617469)
chr8 (222-327)||(16096540-16096645)
chr8 (254-371)||(3850139-3850252)
chr8 (254-366)||(13141158-13141266)
chr8 (254-366)||(30105852-30105960)
chr8 (254-371)||(4622591-4622704)
chr8 (254-371)||(28085748-28085861)
chr8 (254-371)||(43695015-43695128)
chr8 (254-366)||(3704983-3705091)
chr8 (254-361)||(23347021-23347124)
chr8 (254-360)||(15883280-15883382)
chr8 (256-366)||(18955358-18955464)
chr8 (254-371)||(2082122-2082235)
chr8 (254-371)||(17948341-17948454)
chr8 (239-371)||(30556537-30556664)
chr8 (254-361)||(276844-276947)
chr8 (254-361)||(638902-639005)
chr8 (254-361)||(824708-824811)
chr8 (239-366)||(5586957-5587080)
chr8 (254-372)||(44256205-44256319)
chr8 (254-371)||(16096021-16096134)
chr8 (254-371)||(25583449-25583562)
chr8 (254-371)||(39858122-39858235)
chr8 (254-371)||(41545084-41545197)
chr8 (254-371)||(42735706-42735819)
chr8 (254-371)||(6093436-6093549)
chr8 (294-366)||(40304228-40304300)
chr8 (254-371)||(27912506-27912619)
chr8 (254-371)||(27958925-27959038)
chr8 (384-434)||(4622425-4622475)
chr8 (384-434)||(18955585-18955635)
chr8 (384-434)||(25583283-25583333)
chr8 (302-361)||(38576905-38576964)
chr8 (384-434)||(277073-277123)
chr8 (384-434)||(638726-638776)
chr8 (384-434)||(824532-824582)
chr8 (384-434)||(2081956-2082006)
chr8 (384-434)||(3850368-3850418)
chr8 (384-434)||(13140997-13141047)
chr8 (384-434)||(39858317-39858367)
chr8 (384-434)||(40304057-40304107)
chr8 (384-434)||(41545313-41545363)
chr8 (384-434)||(44256434-44256484)
chr8 (239-276)||(17981301-17981338)
chr8 (239-325)||(18089325-18089407)
[»] chr4 (63 HSPs)
chr4 (221-463)||(52448083-52448325)
chr4 (221-465)||(20342451-20342695)
chr4 (221-463)||(4653666-4653908)
chr4 (221-463)||(16665354-16665596)
chr4 (221-463)||(23418414-23418656)
chr4 (221-465)||(20353176-20353420)
chr4 (221-464)||(54920092-54920335)
chr4 (221-463)||(7487960-7488202)
chr4 (222-465)||(17361794-17362037)
chr4 (221-465)||(3034927-3035169)
chr4 (241-465)||(41040676-41040900)
chr4 (221-463)||(20786203-20786447)
chr4 (222-465)||(46718401-46718653)
chr4 (221-438)||(35825264-35825481)
chr4 (221-438)||(13533670-13533887)
chr4 (221-438)||(49874464-49874681)
chr4 (218-438)||(31291793-31292013)
chr4 (221-435)||(35045692-35045906)
chr4 (224-438)||(34073731-34073947)
chr4 (222-434)||(23932658-23932872)
chr4 (221-438)||(27958593-27958807)
chr4 (226-463)||(50495374-50495613)
chr4 (222-353)||(9368002-9368133)
chr4 (221-352)||(30824791-30824922)
chr4 (352-465)||(30826745-30826858)
chr4 (221-327)||(55450501-55450607)
chr4 (254-371)||(13534426-13534539)
chr4 (254-371)||(17361213-17361326)
chr4 (254-371)||(16664732-16664845)
chr4 (254-366)||(49873807-49873915)
chr4 (254-371)||(3035676-3035789)
chr4 (254-371)||(4653044-4653157)
chr4 (254-371)||(35824609-35824722)
chr4 (243-371)||(20353937-20354061)
chr4 (241-361)||(31309702-31309818)
chr4 (239-371)||(34073090-34073217)
chr4 (294-371)||(7487392-7487469)
chr4 (254-371)||(8939488-8939601)
chr4 (254-371)||(20786897-20787010)
chr4 (254-371)||(23419167-23419280)
chr4 (254-371)||(46717781-46717894)
chr4 (254-371)||(52447461-52447574)
chr4 (254-371)||(54919470-54919583)
chr4 (254-361)||(23933427-23933530)
chr4 (254-361)||(49970096-49970199)
chr4 (254-371)||(30827365-30827478)
chr4 (254-359)||(31292476-31292577)
chr4 (384-434)||(20343039-20343089)
chr4 (384-434)||(20353763-20353813)
chr4 (384-434)||(3035510-3035560)
chr4 (384-434)||(16664961-16665011)
chr4 (384-434)||(17361442-17361492)
chr4 (384-434)||(27962140-27962190)
chr4 (384-434)||(34073330-34073380)
chr4 (309-371)||(35045122-35045184)
chr4 (384-434)||(49874037-49874087)
chr4 (384-434)||(49969920-49969970)
chr4 (384-434)||(52447690-52447740)
chr4 (384-434)||(54919699-54919749)
chr4 (239-276)||(14269975-14270012)
chr4 (302-366)||(27962311-27962375)
chr4 (386-434)||(35045288-35045336)
chr4 (384-440)||(55450811-55450867)
[»] chr5 (46 HSPs)
chr5 (221-465)||(15421027-15421271)
chr5 (221-465)||(37939586-37939830)
chr5 (221-463)||(744690-744932)
chr5 (221-463)||(823928-824170)
chr5 (221-463)||(27019218-27019460)
chr5 (221-462)||(20545295-20545536)
chr5 (221-463)||(12500086-12500328)
chr5 (221-463)||(30130042-30130283)
chr5 (221-462)||(42611350-42611591)
chr5 (221-463)||(9592486-9592728)
chr5 (221-463)||(19665639-19665881)
chr5 (221-462)||(39589120-39589360)
chr5 (222-440)||(11985357-11985575)
chr5 (218-438)||(37271128-37271348)
chr5 (218-438)||(13304540-13304760)
chr5 (224-434)||(27551498-27551708)
chr5 (224-438)||(31551246-31551460)
chr5 (224-438)||(9986437-9986651)
chr5 (225-332)||(7180760-7180867)
chr5 (239-371)||(7180928-7181056)
chr5 (243-361)||(27019979-27020093)
chr5 (254-371)||(37270492-37270605)
chr5 (254-361)||(745454-745557)
chr5 (239-366)||(27550828-27550951)
chr5 (254-371)||(9591864-9591977)
chr5 (254-371)||(19665017-19665130)
chr5 (254-371)||(20546026-20546139)
chr5 (254-371)||(30130792-30130905)
chr5 (254-371)||(42612091-42612204)
chr5 (239-348)||(11076967-11077072)
chr5 (254-371)||(12499464-12499577)
chr5 (218-277)||(19503901-19503960)
chr5 (289-361)||(15420473-15420545)
chr5 (254-361)||(39588513-39588617)
chr5 (254-348)||(824707-824797)
chr5 (254-371)||(13305300-13305413)
chr5 (243-361)||(11984694-11984808)
chr5 (384-434)||(745278-745328)
chr5 (384-434)||(824518-824568)
chr5 (384-434)||(12499693-12499743)
chr5 (384-434)||(15420676-15420726)
chr5 (384-434)||(27019803-27019853)
chr5 (384-434)||(30130626-30130676)
chr5 (384-434)||(37270721-37270771)
chr5 (384-434)||(39588743-39588793)
chr5 (384-438)||(42611931-42611985)
[»] chr7 (65 HSPs)
chr7 (221-463)||(724583-724825)
chr7 (221-463)||(20120715-20120957)
chr7 (222-464)||(40014738-40014980)
chr7 (221-465)||(41336992-41337236)
chr7 (221-463)||(41857703-41857945)
chr7 (221-463)||(48951332-48951574)
chr7 (221-465)||(48683950-48684194)
chr7 (221-463)||(46554546-46554789)
chr7 (221-463)||(21816092-21816334)
chr7 (221-463)||(28588664-28588906)
chr7 (221-463)||(33245689-33245931)
chr7 (218-463)||(44458350-44458595)
chr7 (222-463)||(44883434-44883675)
chr7 (221-463)||(3415205-3415445)
chr7 (221-463)||(47908057-47908298)
chr7 (228-438)||(5373599-5373809)
chr7 (221-438)||(9662646-9662863)
chr7 (221-438)||(48606672-48606889)
chr7 (218-438)||(46935333-46935553)
chr7 (224-438)||(17967364-17967578)
chr7 (224-438)||(47504346-47504560)
chr7 (224-434)||(8392521-8392731)
chr7 (221-367)||(16274322-16274468)
chr7 (221-380)||(41289207-41289366)
chr7 (224-380)||(44521148-44521304)
chr7 (288-435)||(30759203-30759350)
chr7 (224-412)||(21736233-21736421)
chr7 (339-464)||(18994134-18994259)
chr7 (224-438)||(23593618-23593830)
chr7 (384-464)||(16276783-16276863)
chr7 (221-312)||(4658151-4658242)
chr7 (254-371)||(9663402-9663515)
chr7 (254-371)||(18994768-18994881)
chr7 (254-366)||(41336370-41336478)
chr7 (257-371)||(40015488-40015598)
chr7 (254-371)||(16277371-16277484)
chr7 (254-371)||(20120094-20120207)
chr7 (254-371)||(33246440-33246553)
chr7 (254-351)||(41289425-41289518)
chr7 (254-371)||(41858350-41858463)
chr7 (254-371)||(44459104-44459217)
chr7 (254-371)||(48607432-48607545)
chr7 (254-366)||(46000779-46000887)
chr7 (243-371)||(48683318-48683442)
chr7 (254-371)||(28589398-28589511)
chr7 (254-371)||(47909188-47909301)
chr7 (254-371)||(48951979-48952092)
chr7 (239-371)||(17968119-17968246)
chr7 (243-366)||(44882811-44882930)
chr7 (416-465)||(4925633-4925682)
chr7 (254-371)||(725334-725447)
chr7 (254-371)||(3415956-3416069)
chr7 (254-371)||(21815470-21815583)
chr7 (254-371)||(46555296-46555409)
chr7 (239-371)||(46936085-46936214)
chr7 (254-366)||(4925009-4925117)
chr7 (218-287)||(30758307-30758376)
chr7 (239-371)||(30759894-30760025)
chr7 (390-438)||(44521300-44521348)
chr7 (239-343)||(47503675-47503775)
chr7 (239-371)||(23594370-23594499)
chr7 (384-434)||(8393110-8393160)
chr7 (239-277)||(10934607-10934645)
chr7 (384-434)||(44458938-44458988)
chr7 (384-434)||(44883041-44883091)
[»] chr6 (37 HSPs)
chr6 (221-463)||(16918844-16919086)
chr6 (221-463)||(27783148-27783390)
chr6 (221-465)||(11836742-11836986)
chr6 (221-463)||(4588991-4589233)
chr6 (221-463)||(14104663-14104905)
chr6 (222-463)||(23573746-23573987)
chr6 (221-465)||(27440579-27440827)
chr6 (221-440)||(954728-954947)
chr6 (221-438)||(28579299-28579517)
chr6 (218-438)||(15288203-15288423)
chr6 (241-435)||(11153794-11153988)
chr6 (224-430)||(1090484-1090690)
chr6 (221-366)||(5687408-5687557)
chr6 (254-432)||(24083826-24084003)
chr6 (224-438)||(21860488-21860699)
chr6 (313-438)||(25118975-25119100)
chr6 (221-321)||(25119520-25119620)
chr6 (239-366)||(24083168-24083291)
chr6 (254-366)||(955493-955601)
chr6 (254-371)||(27782528-27782641)
chr6 (254-366)||(11154527-11154635)
chr6 (254-366)||(14104051-14104159)
chr6 (254-371)||(4589724-4589837)
chr6 (254-371)||(16918456-16918569)
chr6 (254-371)||(17550730-17550843)
chr6 (260-371)||(21861168-21861275)
chr6 (254-348)||(25109601-25109691)
chr6 (254-371)||(11837490-11837603)
chr6 (254-371)||(28578668-28578781)
chr6 (254-371)||(27438458-27438571)
chr6 (384-434)||(27782757-27782807)
chr6 (295-348)||(23580374-23580427)
chr6 (384-434)||(11154368-11154418)
chr6 (384-434)||(23580566-23580616)
chr6 (384-434)||(27438686-27438736)
chr6 (386-434)||(11837327-11837375)
chr6 (384-440)||(14104280-14104336)
[»] chr2 (44 HSPs)
chr2 (221-465)||(38281362-38281606)
chr2 (222-465)||(37724607-37724850)
chr2 (221-463)||(3906005-3906247)
chr2 (221-463)||(39966260-39966502)
chr2 (221-463)||(76733-76973)
chr2 (221-438)||(15153286-15153503)
chr2 (221-438)||(28391048-28391265)
chr2 (222-438)||(15399711-15399927)
chr2 (221-435)||(2291394-2291608)
chr2 (226-438)||(1054242-1054454)
chr2 (224-438)||(27550712-27550926)
chr2 (223-438)||(39068101-39068316)
chr2 (224-438)||(3754038-3754249)
chr2 (224-438)||(3850898-3851109)
chr2 (295-438)||(4737406-4737549)
chr2 (224-438)||(39774285-39774496)
chr2 (299-438)||(6645381-6645520)
chr2 (262-438)||(42080005-42080178)
chr2 (254-371)||(2292153-2292266)
chr2 (254-371)||(3906744-3906857)
chr2 (224-307)||(6645930-6646013)
chr2 (243-366)||(14005921-14006040)
chr2 (254-361)||(15399051-15399154)
chr2 (254-371)||(4738091-4738204)
chr2 (254-371)||(37725354-37725467)
chr2 (254-366)||(15152641-15152749)
chr2 (254-366)||(25223542-25223650)
chr2 (263-366)||(77460-77559)
chr2 (263-366)||(6644737-6644836)
chr2 (254-361)||(28391664-28391767)
chr2 (289-371)||(38282113-38282195)
chr2 (260-366)||(42080656-42080758)
chr2 (239-371)||(27551449-27551577)
chr2 (289-371)||(3754735-3754817)
chr2 (289-371)||(3851578-3851660)
chr2 (239-318)||(33853095-33853170)
chr2 (304-366)||(39967016-39967078)
chr2 (288-366)||(40494658-40494736)
chr2 (365-434)||(25223752-25223821)
chr2 (365-434)||(39966845-39966914)
chr2 (289-371)||(39774955-39775035)
chr2 (384-434)||(6644958-6645008)
chr2 (384-434)||(28391488-28391538)
chr2 (296-361)||(38552036-38552101)
[»] scaffold0115 (3 HSPs)
scaffold0115 (221-465)||(22670-22914)
scaffold0115 (254-371)||(20965-21077)
scaffold0115 (384-434)||(21193-21243)
[»] scaffold0003 (2 HSPs)
scaffold0003 (221-465)||(46534-46782)
scaffold0003 (254-371)||(48791-48904)
[»] scaffold0208 (3 HSPs)
scaffold0208 (224-438)||(4916-5130)
scaffold0208 (239-371)||(5622-5750)
scaffold0208 (384-434)||(5456-5506)
[»] scaffold0075 (1 HSPs)
scaffold0075 (224-445)||(18402-18622)
[»] scaffold0060 (2 HSPs)
scaffold0060 (224-438)||(56968-57179)
scaffold0060 (260-371)||(56387-56494)
[»] scaffold0259 (3 HSPs)
scaffold0259 (224-380)||(5073-5229)
scaffold0259 (239-361)||(5929-6047)
scaffold0259 (390-434)||(5225-5269)


Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 100)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 218 - 464
Target Start/End: Original strand, 27331014 - 27331260
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||    
T  27331014 gatccataatgtaatattgccttaattatatttaagtgttcaatcttaattaatttacactacaagactgacttagaacaattaaaatttcacatcaaat 27331113  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||    
T  27331114 ttctttcatctgaatgttcttaaatttatcagttatattcataaaatttattcctctcattttgattgttcaattttgtcgttcccaactgccgcatttt 27331213  T
Q  418 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27331214 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 27331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 27127131 - 27126889
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  27127131 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 27127032  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  27127031 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 27126932  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27126931 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 27126889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 50610392 - 50610150
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  50610392 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 50610293  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  50610292 tttcatctgaatgtccttaaatttatcaattatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 50610193  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  50610192 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 50610150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 222 - 463
Target Start/End: Original strand, 30042586 - 30042827
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  30042586 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttct 30042685  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||    
T  30042686 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttgtcaa 30042785  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30042786 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 30042827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 222 - 463
Target Start/End: Original strand, 41697191 - 41697432
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  41697191 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct 41697290  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||    
T  41697291 ttcatctgaatgtatttaaatttatcagttatattcataaaatttattcctcacattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 41697390  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41697391 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 41697432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 222 - 463
Target Start/End: Original strand, 44842293 - 44842534
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  44842293 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactcgcttagaacaattaaaatttcacatcaaatttct 44842392  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||   ||||||||||||||||||||||| ||||||||||||||    
T  44842393 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattccttccattttgattgttcaattttgtcgttcccaaccgccgcatttttcaa 44842492  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  44842493 ttttcgtgagaatcgtcatgatttcaaatatcgcgagaattg 44842534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 218 - 465
Target Start/End: Original strand, 50547574 - 50547821
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |  | ||||||||||||||||||||||||||||||    
T  50547574 gatccataatgtaatattgccttaattatatttagatgttcaatcttaattaatttacactacaggtatggcttagaacaattaaaatttcacatcaaat 50547673  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||| |||||||    
T  50547674 ttctttcatctgaatgtccttaaatttataagttatattcctaaaatttattcctcccattttgattgttcaattttgtcgttcccaactgcagcatttt 50547773  T
Q  418 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50547774 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 50547821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 223 - 465
Target Start/End: Complemental strand, 23020738 - 23020496
Alignment:
Q  223 ataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctt 322  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||| |||||||||||||||||||||| |||||||||| |    
T  23020738 ataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacattacatgactggcttagaacaattaaaatttcatatcaaatttcat 23020639  T
Q  323 tcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaat 422  Q
    |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  23020638 tcatctgaatgtccttaaatttatcagttatattcataaattttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaat 23020539  T
Q  423 tttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23020538 tttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 23020496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 18411169 - 18410926
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||    
T  18411169 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttaaactacatgactgacttagaacaattaaaatttcacatcaaatttc 18411070  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||   ||||||||||||||||| |||||||||||||||||||    
T  18411069 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcttcccattttgattgttcaattttgtcgtt-ccaactgccgcatttttca 18410971  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18410970 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 18410926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 222 - 461
Target Start/End: Complemental strand, 45170943 - 45170704
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  45170943 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct 45170844  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||| | ||||||||||| |||||||||||||| |||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||    
T  45170843 ttcatctgaatttccttaaatttattagttatattcataaaatttattccttccattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 45170744  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaat 461  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45170743 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaat 45170704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 37219296 - 37219538
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  37219296 ccataatgtaatattgccttaattatatttaggtgttcagtcttaattaatttccactacatgactggcttagaacaattaaaatttcacatcaaatttc 37219395  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||   |||||||||| |||||||||||||||||||||||| |    
T  37219396 tttcatctgaatgtcattaaatttatcagttatattcataaaatttattcctcccattttgattgttcaatttggtcgttcccaactgccgcatttttaa 37219495  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37219496 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 37219538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 40907092 - 40906847
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaa-ttaaaatttcacatcaaattt 319  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||    
T  40907092 ccataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaaattaaaatttcacatcaaattt 40906993  T
Q  320 ctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttc 419  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||| ||||||||| |||||||||||||||||||||    
T  40906992 ctttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgtttaattttgtcattcccaactgccgcatttttc 40906893  T
Q  420 aattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40906892 aattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 40906847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 16464872 - 16464630
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  16464872 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 16464773  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||   |||||   ||||||||||||||||||| |||||||||||||||||    
T  16464772 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctatgattttgattgttcaattttgtcgttcctaactgccgcatttttca 16464673  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  16464672 attttcgtgaaaatcgtcatgatttcaaatatcgtgagaattg 16464630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 45052813 - 45053055
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  45052813 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttc 45052912  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||| ||||||||| |||||||||||| ||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||  ||||||||||    
T  45052913 tttcttctgaatgtccttaaatttatctgttatattcataaaatttattccttccattttgattgttcaattttgtcgttcccaactgttgcatttttca 45053012  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  45053013 attttcgtgagaatcgtcatgatttcaaatatcgttagaattg 45053055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 221 - 462
Target Start/End: Complemental strand, 11122555 - 11122314
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  11122555 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttagaacaattaaaatttcatatcaaatttc 11122456  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||| ||||||| ||||||||||     
T  11122455 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttaattgttcaattttgtcgttgccaactgtcgcatttttct 11122356  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 462  Q
    ||||| ||||||||||||||||||||||||||||| ||||||    
T  11122355 atttttgtgagaatcgtcatgatttcaaatatcgttagaatt 11122314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 221 - 464
Target Start/End: Complemental strand, 16009742 - 16009499
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  16009742 ccataatgtaatatcgccttaattatatttagatgttcaatcttaattaatttacactacaggactggcttagaacaattaaaattttacatcaaatttc 16009643  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||   |||||||||||||| ||||||||||||||||||||||    
T  16009642 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcttcccattttgattgttcaattttgtcattcccaactgccgcatttttca 16009543  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    ||||| | ||||||||||||||||| ||||||||||||||||||    
T  16009542 atttttgagagaatcgtcatgattttaaatatcgtgagaattgt 16009499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 2218940 - 2218702
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||    ||||||||||||||||||||||||||||||    
T  2218940 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggact----tagaacaattaaaatttcacatcaaatttc 2218845  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||   |||| ||||||||||||||| ||||||||||||||||    
T  2218844 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctaccattttgattgtttaattttgtcgttccctactgccgcatttttca 2218745  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  2218744 attttcgtgagaatcatcatgatttcaaatatcgtgagaattg 2218702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 8850878 - 8851125
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| ||     
T  8850878 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcatatcaaaattt 8850977  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttc---aattttgtcgttcccaactgccgcatttt 417  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||   |||||   |||||||||||||||||||  ||||||||    
T  8850978 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattccccccattttgattgttcaataattttgtcgttcccaactatcgcatttt 8851077  T
Q  418 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  8851078 tcaattttcgtgagaatcgtcatgatttcaaatatcgttagaattgtc 8851125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 41102624 - 41102384
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  |  ||||||||||||||||||||||||||||     
T  41102624 ccataatttaatattgccttaattatatttagctgttcaatcttaattaatttacactacaggactgac--agaacaattaaaatttcacatcaaatttg 41102527  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  41102526 tttcatctgaatgtccttaaatttatcggttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccacatttttca 41102427  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  41102426 attttcgtgagaatcatcatgatttcaaatatcgtgagaattg 41102384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 31312725 - 31312942
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  31312725 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttc 31312824  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||| | || ||||||    
T  31312825 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgtcacacttttca 31312924  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  31312925 attttcgtgagaatcgtc 31312942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 289 - 464
Target Start/End: Original strand, 27324848 - 27325023
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttc 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||   |||||    
T  27324848 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctctcattttgattgttc 27324947  T
Q  389 aattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27324948 aattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 27325023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 225 - 438
Target Start/End: Complemental strand, 38236468 - 38236255
Alignment:
Q  225 aatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttc 324  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  38236468 aatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgtcttagaacaattaaaatttcacatcaaatttctttc 38236369  T
Q  325 atctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattt 424  Q
    |||||||||| |||||||||||| ||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||| |||||||| ||||||    
T  38236368 atctgaatgtccttaaatttatctgttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgtcgcattttccaattt 38236269  T
Q  425 tcgtgagaatcgtc 438  Q
    ||||||||||||||    
T  38236268 tcgtgagaatcgtc 38236255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 222 - 438
Target Start/End: Complemental strand, 43339309 - 43339094
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||    
T  43339309 cataatgtaatcttgccttaattatatttatgtgttcaatcttaattaatttacactacaggactggtttagaacaattaaaatttcacatcaaatttct 43339210  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||| ||    
T  43339209 ttcatctgaatatccttaaatttatcagttatattcataaaatttattcttctcattttgattgttcaattttgtcgttcccaactgccgcattttt-aa 43339111  T
Q  422 ttttcgtgagaatcgtc 438  Q
    |||||||||||||||||    
T  43339110 ttttcgtgagaatcgtc 43339094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 221 - 435
Target Start/End: Complemental strand, 38697806 - 38697592
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| |||||||||||||||| |  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  38697806 ccataatgtaatcttgccttaattatattcaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 38697707  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||||||  |||||||||||||| |||||||||| |||| ||| || ||||||   |||||||||||||||||||||||||||||||||||||    
T  38697706 tttcatctgaatgtatttaaatttatcagtcatattcataaaatttcttcttctcattttgattgttcaattttgtcgttcccaactgccgcatttttca 38697607  T
Q  421 attttcgtgagaatc 435  Q
    |||||||||||||||    
T  38697606 attttcgtgagaatc 38697592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 218 - 438
Target Start/End: Complemental strand, 42826944 - 42826724
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||| ||||    
T  42826944 gatccctaatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacattaaat 42826845  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||| ||||| ||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| ||||||||||||||    
T  42826844 ttccttcatatgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccgcatttt 42826745  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    |||||||||||||||||||||    
T  42826744 tcaattttcgtgagaatcgtc 42826724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 221 - 435
Target Start/End: Complemental strand, 18762886 - 18762672
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||||||||||||| ||| |||  ||||||| |||||||||||||||||||||||||    
T  18762886 ccataatgtaatattgtattaattatatttaggtgttcaatcttaattaatttacactacaagaccggcttagagcaattaaaatttcacatcaaatttc 18762787  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||| ||    
T  18762786 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcattttcca 18762687  T
Q  421 attttcgtgagaatc 435  Q
    |||||||| ||||||    
T  18762686 attttcgtcagaatc 18762672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 37181091 - 37181306
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  37181091 taatgtaatcttgacttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaattttttt 37181190  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgca-tttttcaat 422  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| |||||||||| ||||| |||    
T  37181191 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccgcatttttttaat 37181290  T
Q  423 tttcgtgagaatcgtc 438  Q
    ||||||||||||||||    
T  37181291 tttcgtgagaatcgtc 37181306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 282 - 465
Target Start/End: Original strand, 47912115 - 47912298
Alignment:
Q  282 tgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttt 381  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||     
T  47912115 tgactggcttagaataattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataagatttatttctcccattttg 47912214  T
Q  382 tctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
      |||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  47912215 attgttcaattttgtcgttctcaaccgccgcatttttcaatttttgtgagaatcgtcatgatttcaaatattgtgagaattgtc 47912298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 221 - 408
Target Start/End: Original strand, 52746411 - 52746598
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||     
T  52746411 ccataatgtaatattgccttaattatatttagatgttcaatcttaattaatttatactacatgactgacttagaacaattaaaatttcacatcaaatttt 52746510  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactg 408  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||    
T  52746511 tttcatatgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactg 52746598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 30362700 - 30362914
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  30362700 taatgtaatattgacttaattatatttaggtgttcaatcttaattaatctacactacatgactggcttagaacaattaaaattttacatcaaatttcttt 30362799  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| |||| |||||||||||| |||||||| |||||||| |||||||||   ||||||||||||||||||| |||| ||| |||||| ||||    
T  30362800 catctgaatgtccttacatttatcagttacattcataacatttattcttcccattttgattgttcaattttgtcgttccaaacttccgtattttttaatt 30362899  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  30362900 ttcgtgagaatcgtc 30362914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 222 - 463
Target Start/End: Complemental strand, 22605812 - 22605582
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    |||||||||||||| ||| |||||||||||  |||||||||||||||||||||||| ||| |||| | ||| ||||||||||||||||||||||||||||    
T  22605812 cataatgtaatattccct-aattatatttaggtgttcaatcttaattaatttacactacaggactgg-ttataacaattaaaatttcacatcaaatttct 22605715  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||   |||||||||||||||||| |||||||||||||||| ||    
T  22605714 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattccacccattttgattgttcaattttgtcgttcacaactgccgcattttttaa 22605615  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||| |||         |||||||||||||||||||||||||    
T  22605614 tttttgtg---------atgatttcaaatatcgtgagaattg 22605582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 221 - 435
Target Start/End: Original strand, 51721902 - 51722117
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgtt-caatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaattt 319  Q
    |||||||||||| ||||||||||||||||||  |||| |||||||||||||| ||||| ||| ||||  |||||||||||||||||||||||| ||||||    
T  51721902 ccataatgtaatcttgccttaattatatttaggtgttacaatcttaattaatctacactacaggactgacttagaacaattaaaatttcacattaaattt 51722001  T
Q  320 ctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttc 419  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||| ||  |||||||||   |||||||||||||| ||| |||||||||||||||||    
T  51722002 ctttcatctgaatgtccttaaatttatcagttacattcataaaatttctttttcccattttgattgttcaattttgtcattcacaactgccgcatttttc 51722101  T
Q  420 aattttcgtgagaatc 435  Q
    ||||||||||||||||    
T  51722102 aattttcgtgagaatc 51722117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 224 - 433
Target Start/End: Original strand, 53777465 - 53777674
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  53777465 taatgtaatattgccttaattatatttaggtattcaatcttaattaatttagactacatgactgacttagaacaattaaaatttcacatcaaatttcttt 53777564  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||| ||||||| ||| |||||||| |||| ||  ||||||||    ||||||||||||||||||| |||||||||||||||||||     
T  53777565 catctgaatgtccttaagtttatcatttacattcataaaatttcttattcccatttcaattgttcaattttgtcgttccaaactgccgcatttttcaata 53777664  T
Q  424 ttcgtgagaa 433  Q
    ||||||||||    
T  53777665 ttcgtgagaa 53777674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 222 - 394
Target Start/End: Original strand, 30439417 - 30439589
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||    
T  30439417 cataatgtaatattgccttaattatatttagacgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcatatcaaatttct 30439516  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaatttt 394  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||   |||||||||||    
T  30439517 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctccaattttgattgttcaatttt 30439589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 10826828 - 10827045
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| | ||||||||||||||||  |||| ||| ||||||||||||||| ||| ||||  ||||||||||||| |||||| |||||||||||    
T  10826828 ccataatgtaatctggccttaattatatttaggtgttaaattttaattaatttacactacaggactgacttagaacaattataatttcgcatcaaatttc 10826927  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||| |||||||| | ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| ||||||| ||||||| |    
T  10826928 ttttatctgaatatccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccacatttttta 10827027  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  10827028 attttcgtgagaatcgtc 10827045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 221 - 366
Target Start/End: Original strand, 4232019 - 4232164
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||    
T  4232019 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactagatgactggcttagaacaattaaaagttcacatcaaatttc 4232118  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||    
T  4232119 tttcatctgaatgtccttaaatttatcagttatattcataaaattt 4232164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 37786365 - 37786145
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||| |||   ||||||||||||||||||||||||||||||||    
T  37786365 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttgcactacaagaccgacttagaacaattaaaatttcacatcaaatttc 37786266  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| ||||||||||                      ||||||| |||||   ||||||||||||| |||||||||||||||||||||||    
T  37786265 tttcatctgaatgtccttaaattta----------------------ttcctcctattttgattgttcaattttgttgttcccaactgccgcatttttca 37786188  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  37786187 attttcatgagaatcgtcatgattttaaatatcgtgagaattg 37786145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 218 - 434
Target Start/End: Original strand, 22428016 - 22428230
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||  || ||||  |||||||||||||||||||||||||||||    
T  22428016 gatccctaatgtaattttgccttaattatatttaggtgttcaatcttaattaatttacactgcaggactgacttagaacaattaaaatttcacatcaaat 22428115  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    || || ||| ||||||| ||||||| ||||||||| || |||||   || || || |||||||   ||||||| ||||||||||| |||||||||| |||    
T  22428116 ttattccatatgaatgtccttaaatatatcagttacatgcataaagattctt-cttccattttgattgttcaa-tttgtcgttccaaactgccgcaattt 22428213  T
Q  418 tcaattttcgtgagaat 434  Q
    ||||||||| |||||||    
T  22428214 tcaattttcctgagaat 22428230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 354 - 464
Target Start/End: Original strand, 4232305 - 4232415
Alignment:
Q  354 attcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcatgatttcaaatatc 453  Q
    |||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4232305 attcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcataatttcaaatatc 4232404  T
Q  454 gtgagaattgt 464  Q
    |||||||||||    
T  4232405 gtgagaattgt 4232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 289 - 465
Target Start/End: Complemental strand, 55412098 - 55411913
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttc 388  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||| ||  |||||||||   |||||    
T  55412098 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcatttacattcataaaatttcttattcccattttgattgttc 55411999  T
Q  389 aattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtca---------tgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||| ||||||||||| | |||   ||||||||||||||||         ||||||||||||||||||||||||||    
T  55411998 aattttgtcgttccaaactgccgcatgtgtcataattcgtgagaatcgtcatcgttcgtttgatttcaaatatcgtgagaattgtc 55411913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 343 - 438
Target Start/End: Original strand, 3891891 - 3891986
Alignment:
Q  343 ttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    |||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  3891891 ttatcagttacattcataaaattttttcttcccattttgattgttcaattttgtcgttccaaactgccgcattttttaattttcgtgagaatcgtc 3891986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 27321097 - 27321205
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||||||||||| |||||||| |||| |||     
T  27321097 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcatttac 27321192  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  27321193 attcataaaattt 27321205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 15084521 - 15084408
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  15084521 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 15084426  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  15084425 attcataaaatttcttcc 15084408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 16008877 - 16008990
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  16008877 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 16008972  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  16008973 attcataaaatttcttcc 16008990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 37220055 - 37219942
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  37220055 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgtatgtccttaaattcatcatttac 37219960  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  37219959 attcataaaatttcttcc 37219942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 41101760 - 41101873
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  41101760 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 41101855  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  41101856 attcataaaatttcttcc 41101873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 43338438 - 43338551
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||  |||||| |||||| |||| |||     
T  43338438 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatcttgatgttcataaattcatcacttac 43338533  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  43338534 attcataaaatttcttcc 43338551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 329
Target Start/End: Original strand, 3891744 - 3891847
Alignment:
Q  226 atgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttca 325  Q
    ||||||| ||| |||||||| |||||  |||||||||||||||||||||| | |||||| | ||||| || |||| ||||||||||||||||||| ||||    
T  3891744 atgtaatcttgacttaattacatttaggtgttcaatcttaattaatttacgctacatgattggcttaaaaaaattcaaatttcacatcaaatttcattca 3891843  T
Q  326 tctg 329  Q
    ||||    
T  3891844 tctg 3891847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 37785515 - 37785639
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| || |||||||||||||||||||||||| ||| |||| |     ||||| |||||||| ||||||||||||||||||||| |||| |||||||    
T  37785515 ttatattaaagtgttcaatcttaattaatttacactacaagacttgt----aacaaataaaattttacatcaaatttctttcatctggatgtccttaaat 37785610  T
Q  343 ttatcagttatattcataagatttattcc 371  Q
    | |||| ||| |||||||| |||| ||||    
T  37785611 tcatcatttacattcataaaatttcttcc 37785639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 4233037 - 4232924
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| |||     
T  4233037 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttac 4232942  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  4232941 attcataaaatttcttcc 4232924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 27126299 - 27126412
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||||||||| || ||| ||||    || ||||| |||||||| ||||||||||| |||||||||||||| |||||||| |||| |||     
T  27126299 tgttcaatcttaattaatttaaactacaagact----tataacaaataaaattttacatcaaatttttttcatctgaatgtccttaaattcatcatttac 27126394  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27126395 attcataaaatttcttcc 27126412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 30043445 - 30043344
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  30043445 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 30043350  T
Q  354 attcat 359  Q
    ||||||    
T  30043349 attcat 30043344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 45170084 - 45170197
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||||||||| || ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  45170084 tgttcaatcttaattaatttatactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 45170179  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  45170180 attcataaaatttcttcc 45170197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 47912900 - 47912787
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| || | |||||||| |||| |||     
T  47912900 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatttccttaaattcatcatttac 47912805  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  47912804 attcataaaatttcttcc 47912787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 50548441 - 50548328
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  50548441 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 50548346  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  50548345 attcataaaatttcttcc 50548328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 53778329 - 53778216
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||||| |    || ||||| |||||||| |||| |||||||||||||||| |||| |||||||| |||| |||     
T  53778329 tgttcaatcttaattaatttacactacatgagt----tataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcacttac 53778234  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  53778233 attcataaaatttcttcc 53778216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 371
Target Start/End: Original strand, 18410306 - 18410418
Alignment:
Q  255 gttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttata 354  Q
    ||||||||||||||||||||||| ||| ||||    ||  |||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| |    
T  18410306 gttcaatcttaattaatttacactacaagact----tatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttaca 18410401  T
Q  355 ttcataagatttattcc 371  Q
    ||||||| |||| ||||    
T  18410402 ttcataaaatttcttcc 18410418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 30440248 - 30440136
Alignment:
Q  255 gttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttata 354  Q
    |||||||||||||||||||||||  || ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| |    
T  30440248 gttcaatcttaattaatttacacttcaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttaca 30440153  T
Q  355 ttcataagatttattcc 371  Q
    ||||||| |||| ||||    
T  30440152 ttcataaaatttcttcc 30440136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 44843155 - 44843047
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||| |||||||||||||||| |||| |||||||| |||| |||     
T  44843155 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcatttac 44843060  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  44843059 attcataaaattt 44843047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 366
Target Start/End: Complemental strand, 22428912 - 22428789
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| |||| |     ||||| |||||||| ||||||||||||||||||||| |||| |||    
T  22428912 ttaattatattaaggtgttcaatcttaattaatttacactacaagacttgt----aacaaataaaattttacatcaaatttctttcatctggatgtcctt 22428817  T
Q  339 aaatttatcagttatattcataagattt 366  Q
    ||||| |||| ||  |||||||| ||||    
T  22428816 aaattcatcacttgcattcataaaattt 22428789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 366
Target Start/End: Complemental strand, 22732595 - 22732472
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    |||||||||||||  |||||||||||||||||||||||| | | |    ||||| |||||||||||||||||||||| |||||||||| |  |||| |||    
T  22732595 ttaattatatttaggtgttcaatcttaattaatttacactatagg----gcttataacaattaaaatttcacatcaattttctttcatttagatgtcctt 22732500  T
Q  339 aaatttatcagttatattcataagattt 366  Q
    ||||  ||| |||| |||||||| ||||    
T  22732499 aaatccatcggttacattcataaaattt 22732472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 22604944 - 22605070
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    |||||||||  |||||||||||||||||||||||| ||| ||||    || ||||| | |||||| ||||||||||||||||||| |||||| |||||||    
T  22604944 ttatatttaggtgttcaatcttaattaatttacactacaagactta--tataacaaatgaaattttacatcaaatttctttcatccgaatgtccttaaat 22605041  T
Q  343 ttatcagttatattcataagatttattcc 371  Q
    | |||| |||  ||||||| |||| ||||    
T  22605042 tcatcatttactttcataaaatttcttcc 22605070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 16464008 - 16464121
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||| ||||  ||||||| |||| |||     
T  16464008 tgttcaatcttaattaatttacactacaagact----tataaaaaataaaattttacatcaaatttctttcatctggatgtctttaaattcatcatttac 16464103  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  16464104 attcataaaatttcttcc 16464121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 38235587 - 38235700
Alignment:
Q  244 tatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatt 343  Q
    |||||| | |||||||||||||| |||||||||||||| ||||    || ||||| | |||||| |||| |||||||||||||||| |||| ||||||||    
T  38235587 tatattaagatgttcaatcttaactaatttacaccacaagact----tataacaaatgaaattttacattaaatttctttcatctggatgtccttaaatt 38235682  T
Q  344 tatcagttatattcataa 361  Q
     |||| ||| ||||||||    
T  38235683 catcacttacattcataa 38235700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 40423783 - 40423896
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||| | ||||||||||||| |||| ||||||||  ||| |||     
T  40423783 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcgagtttctttcatctggatgtccttaaattcctcacttac 40423878  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  40423879 attcataaaatttcttcc 40423896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 41698054 - 41697941
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||| |||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||  |||     
T  41698054 tgttcaatcttgattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcgtttac 41697959  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  41697958 attcataaaatttcttcc 41697941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 51722758 - 51722645
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||| |||||||||||||||| |||| |||||||| |||| ||      
T  51722758 tgttcaatcttaattaatttacacaacaagact----tataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcactttc 51722663  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  51722662 attcataaaatttcttcc 51722645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 366
Target Start/End: Complemental strand, 37181943 - 37181820
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||| ||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  37181943 ttaattatattaaggtgtttaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtcctt 37181848  T
Q  339 aaatttatcagttatattcataagattt 366  Q
     |||| |||| ||| |||||||| ||||    
T  37181847 gaattcatcacttacattcataaaattt 37181820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 361
Target Start/End: Complemental strand, 30363653 - 30363535
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| | ||||||||||||||||||||| ||| | | ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  30363653 ttaattatattaagatgttcaatcttaattaatttgcactataagact----tataacaaataaaattttacatcaaatttttttcatctggatgtcctt 30363558  T
Q  339 aaatttatcagttatattcataa 361  Q
    | ||| |||| ||| ||||||||    
T  30363557 agattcatcaattacattcataa 30363535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 38696970 - 38697047
Alignment:
Q  294 aacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| |||||||| |||| ||||    
T  38696970 aacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaatttcttcc 38697047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 361
Target Start/End: Original strand, 42826071 - 42826189
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| |||||    | || || |||||||| | || |||||||||||||||||||||  ||    
T  42826071 ttaattatattaaggtgttcaatcttaattaatttacactacaagactc----ataataaataaaattttatattaaatttctttcatctgaatgtcttt 42826166  T
Q  339 aaatttatcagttatattcataa 361  Q
    ||||| |||| ||| ||||||||    
T  42826167 aaattcatcacttacattcataa 42826189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 30439581 - 30439629
Alignment:
Q  417 ttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30439581 ttcaattttcgtgagaatcgtcatgatttcaaatatcgtaaaaattgtc 30439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 8851741 - 8851638
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    ||  |||| |||||||| ||||||||||||||||||||  || | |||||||| |||| |||     
T  8851741 tgttcaatcttaattaatttacactacaagact----tatgacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatcatttac 8851646  T
Q  354 attcataa 361  Q
    ||||||||    
T  8851645 attcataa 8851638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 45053675 - 45053564
Alignment:
Q  256 ttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatat 355  Q
    ||||||| |||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||  || | |||||||| |||| ||| ||    
T  45053675 ttcaatcctaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatcatttacat 45053580  T
Q  356 tcataagatttattcc 371  Q
    |||||| |||| ||||    
T  45053579 tcataaaatttcttcc 45053564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 11121690 - 11121803
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    ||  |||| |||||||| ||||||||||||||||||||  || | |||||||| |||| |||     
T  11121690 tgttcaatcttaattaatttacactacaatact----tatgacaaataaaattttacatcaaatttctttcatctagatctccttaaattcatcatttac 11121785  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  11121786 attcataaaatttcttcc 11121803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 23019881 - 23019990
Alignment:
Q  258 caatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattc 357  Q
    |||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||| || || |||| |||||||| |||| ||| ||||    
T  23019881 caatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttaatatggatgtacttaaattcatcatttacattc 23019976  T
Q  358 ataagatttattcc 371  Q
    |||| |||| ||||    
T  23019977 ataaaatttcttcc 23019990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 6175576 - 6175494
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    |||| ||||| |||||||| |||| |||||||||||||||  |||| |||||||| |||| ||| |||||||| |||| ||||    
T  6175576 cttataacaaataaaattttacattaaatttctttcatctagatgtccttaaattcatcatttacattcataaaatttcttcc 6175494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 13213780 - 13213830
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  13213780 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtgagaat 13213830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 27321326 - 27321376
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  27321326 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtgagaat 27321376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 51722529 - 51722479
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||||||||| | ||||||||    
T  51722529 tgttcaattttgtcgttccaaactgccgcagttttcaattatagtgagaat 51722479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 55411286 - 55411390
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||| |||||||||||||||||  |||||||    || ||||| |||||||| ||||||||||||||||||    |||| |||||||| |||| |||     
T  55411286 tgttcagtcttaattaatttacactgcatgact----tataacaaataaaattttacatcaaatttctttcat----atgtccttaaattcatcacttac 55411377  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  55411378 attcataaaattt 55411390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 366
Target Start/End: Complemental strand, 3892661 - 3892534
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaa----tttctttcatctgaatgt 334  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| ||||||||    ||| ||||||||| || |    
T  3892661 ttaattatattaaggtgttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaaatttttttttttcatctggatat 3892566  T
Q  335 tcttaaatttatcagttatattcataagattt 366  Q
     |||||||| |||| ||| |||||||| ||||    
T  3892565 ccttaaattcatcacttacattcataaaattt 3892534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 27325617 - 27325504
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    || || || | |||||| | ||||||||||| ||||||| |||| |||||||| |||| |||     
T  27325617 tgttcaatcttaattaatttacactacaacact----tataaaaaatcaaattttaaatcaaatttctctcatctggatgtccttaaattcatcatttac 27325522  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27325521 attcataaaatttcttcc 27325504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 27331854 - 27331741
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    || || || | |||||| | ||||||||||| ||||||| |||| |||||||| |||| |||     
T  27331854 tgttcaatcttaattaatttacactacaacact----tataaaaaatcaaattttaaatcaaatttctctcatctggatgtccttaaattcatcatttac 27331759  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27331758 attcataaaatttcttcc 27331741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 55412197 - 55412141
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacac 277  Q
    ||||||||| || ||||||||||||||||||  | ||||||||||||| ||||||||    
T  55412197 ccataatgtgatcttgccttaattatatttaggtattcaatcttaattcatttacac 55412141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 40495939 - 40495876
Alignment:
Q  296 caattaaaatttcacatcaaa-tttctttcatctgaatgttcttaaatttatcagttatattca 358  Q
    ||||||||||||||||| ||| |||||||||||||||| | ||||||| || || |||||||||    
T  40495939 caattaaaatttcacataaaagtttctttcatctgaatatccttaaatctaacaattatattca 40495876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 40906283 - 40906342
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatca 348  Q
    |||| ||||| |||||||| ||||||||||||||||||||| || | |||||||| ||||    
T  40906283 cttataacaaataaaattttacatcaaatttctttcatctggatttccttaaattcatca 40906342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 2218309 - 2218359
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  2218309 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 2218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 3892413 - 3892363
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  3892413 tgttcaattttgtcgttccaaactgccgcagtttccaattatagtgagaat 3892363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 8851516 - 8851466
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  8851516 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 8851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 22605186 - 22605236
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || |||| || ||||||||| ||||||||||    
T  22605186 tgttcaattttgtcgttccaaattgccccaattttcaattatcgtgagaat 22605236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 27126522 - 27126572
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  27126522 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 27126572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 37181699 - 37181649
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  37181699 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 37181649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 38697163 - 38697213
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| ||||| |||| ||||||||| | ||||||||    
T  38697163 tgttcaattttgtcgttccaaactgtcgcagttttcaattatagtgagaat 38697213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 40424010 - 40424060
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  40424010 tgttcaattttgtcgttccaaactgccgcagtttccaattatagtgagaat 40424060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 40906457 - 40906507
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  40906457 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 40906507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 41697825 - 41697775
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  41697825 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 41697775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 45170313 - 45170363
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  45170313 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 45170363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 4232827 - 4232758
Alignment:
Q  365 ttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    |||||| |||||||||   ||||||||||||||||||| || ||||||| ||| ||||| || |||||||    
T  4232827 ttattcttcccattttgattgttcaattttgtcgttccaaattgccgcaatttccaattatcttgagaat 4232758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 10827677 - 10827600
Alignment:
Q  262 cttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatt 343  Q
    |||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||  |||| ||||||||    
T  10827677 cttaattaatttacactacaagact----tataataaataaaattttacatcaaatttctttcatctagatgtccttaaatt 10827600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 10773661 - 10773417
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  10773661 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 10773562  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  10773561 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 10773462  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10773461 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 10773417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 7153850 - 7153608
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  7153850 ccataatgtaatattgtcttaattatatttatgtgttcaatcttaattaatttacactacaggactagcttagaacaattaaaatttcacatcaaatttc 7153751  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  7153750 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 7153651  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7153650 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 7153608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 222 - 463
Target Start/End: Complemental strand, 36308771 - 36308530
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||||||    
T  36308771 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttct 36308672  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  36308671 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 36308572  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  36308571 ttttcgtgagaatcgccatgatttcaaatatcgtgagaattg 36308530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 44511508 - 44511750
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||    
T  44511508 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaataattaaaatttcacatcaaatttc 44511607  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||||||||||    
T  44511608 tttcatctgaatgtccttaaatttaccagttatattcataaaatttattcctaccattttgattgttcaattttgtcgttcccaactgccgcatttttca 44511707  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44511708 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 44511750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 221 - 464
Target Start/End: Complemental strand, 33705530 - 33705287
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| || | |||||||||||||||||||| ||||||||||||    
T  33705530 ccataatgtaatatcgccttaattatatttagatgttcaatcttaattaatttacactacaggattggcttagaacaattaaaattttacatcaaatttc 33705431  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  33705430 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 33705331  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    ||||| | ||||||||||||||||| ||||||||||||||||||    
T  33705330 atttttgagagaatcgtcatgattttaaatatcgtgagaattgt 33705287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 222 - 465
Target Start/End: Original strand, 14487902 - 14488145
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||  ||||||||||||||| |||||||||||||||||    
T  14487902 cataatgtaatattgccttaattatatttcagtgttcaatcttaattaatttacacgacaggactgacttagaacaattaaattttcacatcaaatttct 14488001  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    || |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||   |||||||||||||||||||||||| || ||||||||||    
T  14488002 ttaatctgaatgtccttaaatttatcagttatattcataaaatttattcctccgattttgattgttcaattttgtcgttcccaactaccacatttttcaa 14488101  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  14488102 ttttcgtgagaatcgtcatgatttccaatatcgtgagaattgtc 14488145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 222 - 465
Target Start/End: Original strand, 14536491 - 14536734
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||  ||||||||||||||| |||||||||||||||||    
T  14536491 cataatgtaatattgccttaattatatttcagtgttcaatcttaattaatttacacgacaggactgacttagaacaattaaattttcacatcaaatttct 14536590  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    || |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||   |||||||||||||||||||||||| || ||||||||||    
T  14536591 ttaatctgaatgtccttaaatttatcagttatattcataaaatttattcctccgattttgattgttcaattttgtcgttcccaactaccacatttttcaa 14536690  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  14536691 ttttcgtgagaatcgtcatgatttccaatatcgtgagaattgtc 14536734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 221 - 435
Target Start/End: Complemental strand, 36731600 - 36731387
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||| || ||| |||| |||||||||||||||| ||||||||||||||||    
T  36731600 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttagactacaggactggcttagaacaattaaa-tttcacatcaaatttc 36731502  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  36731501 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 36731402  T
Q  421 attttcgtgagaatc 435  Q
    |||||||||||||||    
T  36731401 attttcgtgagaatc 36731387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 218 - 436
Target Start/End: Complemental strand, 51087658 - 51087440
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||| ||||||||||||||||||  ||| ||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||    
T  51087658 gatccataatgtaattttgccttaattatatttaggtgtccaatcttaattaagttacactacatgactgacttagaacaattaaaatttcacatcaaat 51087559  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    |||||| |||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||| ||||||||||||||||||||||    
T  51087558 ttctttaatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttttcgttcccaactgccgcatttt 51087459  T
Q  418 tcaattttcgtgagaatcg 436  Q
    | |||||||||||||||||    
T  51087458 ttaattttcgtgagaatcg 51087440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 29521076 - 29521293
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||| ||||||||||||||||||  |||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  29521076 ccataatataatcttgccttaattatatttaggtgtttaatcttaatgaatttacactacatgactggcttagaacaattaaaatttcatatcaaatttc 29521175  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||| ||| ||||||| |   |||||||||||||||||  |||||||||||||||| |    
T  29521176 tttcatctgaatgtccttaaatttattagttatattcataaaatttcttcttcccattctgattgttcaattttgtcgttttcaactgccgcatttttta 29521275  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  29521276 attttcgtgagaatcgtc 29521293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 25656772 - 25656556
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  25656772 taatgtaatcttgacttaattatatttaggtgttcaatcctaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaattttttt 25656673  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   |||| |||||||||||||| |||| ||| |||||| ||||    
T  25656672 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttaaattttgtcgttccaaactaccgtattttttaatt 25656573  T
Q  424 ttcgtgagaatcgtcat 440  Q
    |||||||||||||||||    
T  25656572 ttcgtgagaatcgtcat 25656556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 30302093 - 30302309
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  30302093 taatgtaatcctgccttaattatatttaggtgttcaatcttaattaatttacactacatgattggcttagaacaattaaaatttcacatcaaatttcttt 30302192  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||| | ||||| ||||||||||||| ||| |||||||| |||| ||| || ||||||   ||||||||||||||||||| ||||||||||||||||||||    
T  30302193 catttcaatgtccttaaatttatcaattacattcataaaatttcttcttctcattttgattgttcaattttgtcgttccaaactgccgcatttttcaatt 30302292  T
Q  424 ttcgtgagaatcgtcat 440  Q
    ||||||| |||||||||    
T  30302293 ttcgtgaaaatcgtcat 30302309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 221 - 435
Target Start/End: Complemental strand, 35955352 - 35955140
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||  |||||||| |||||||  | |||||||||| ||||||||||| ||| || | |||||||||||||||||||||||||||||||||    
T  35955352 ccataatgtaata--gccttaatcatatttaggtattcaatcttagttaatttacactacaggattggcttagaacaattaaaatttcacatcaaatttc 35955255  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||| ||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||| |||||||||| |||||||||    
T  35955254 tttcttctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgtccccaactgccacatttttca 35955155  T
Q  421 attttcgtgagaatc 435  Q
    |||||||||||||||    
T  35955154 attttcgtgagaatc 35955140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 52405517 - 52405301
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||  ||||||||||||| ||||||||||||||||||||||    
T  52405517 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacacgacaggcttagaacaattcaaatttcacatcaaatttcttt 52405418  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||| |||  ||||||| |    ||| | |||||||   ||||||||||||||||||  |||||||||| ||||||| |    
T  52405417 catctgaatgtccttaaatttatcaattacgttcataaaaaaatttcttaccattttgattgttcaattttgtcgttctaaactgccgcagttttcaaat 52405318  T
Q  424 ttcgtgagaatcgtcat 440  Q
    |||||||||||||||||    
T  52405317 ttcgtgagaatcgtcat 52405301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 224 - 433
Target Start/End: Original strand, 33005526 - 33005735
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||| ||||||||||  ||||||||| || |||||||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  33005526 taatgtaatcttgccttgattatatttaggtgttcaatcatatttaatttagactacatgactgacttagaacaattaaaatttcacatcaaatttcttt 33005625  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||| ||||||| ||||| ||||||| ||| |||||||| |||| |   ||||||||    ||||||||||||||||||| ||||||||||||||||||||    
T  33005626 catatgaatgtccttaagtttatcatttacattcataaaatttctcattcccatttcgattgttcaattttgtcgttccaaactgccgcatttttcaatt 33005725  T
Q  424 ttcgtgagaa 433  Q
    ||||||||||    
T  33005726 ttcgtgagaa 33005735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 218 - 438
Target Start/End: Complemental strand, 46119176 - 46118956
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||| ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| || |  |||||||||||||||||||||||||||||    
T  46119176 gatccctaatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacacgattgacttagaacaattaaaatttcacatcaaat 46119077  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||| | ||| |  |||||||||||| ||| |||||||| |||| ||| || ||||||   ||||||||||||||||| | |||| | |||||||    
T  46119076 ttctttcatttcaatatctttaaatttatcaattacattcataaaatttcttcttctcattttgattgttcaattttgtcgtttcaaactactgcatttt 46118977  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    ||||||||||||| |||||||    
T  46118976 tcaattttcgtgaaaatcgtc 46118956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 52406950 - 52406734
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||  ||||||||||||| ||||||||||||||||||||||    
T  52406950 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacacgacaggcttagaacaattcaaatttcacatcaaatttcttt 52406851  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||| |||  ||||||| |    ||| | |||||||   |||||||| |||||||||  |||||||||| ||||||| |    
T  52406850 catctgaatgtccttaaatttatcaattacgttcataaaaaaatttcttaccattttgattgttcaatattgtcgttctaaactgccgcagttttcaaat 52406751  T
Q  424 ttcgtgagaatcgtcat 440  Q
    |||||||||||||||||    
T  52406750 ttcgtgagaatcgtcat 52406734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 224 - 438
Target Start/End: Complemental strand, 12769096 - 12768885
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||      
T  12769096 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaatactggcttagaacaattaaaatttcacatcaaatttct-- 12768999  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     || ||||| | ||||| ||||| | ||| |||||||| |||| ||  |  ||||||   ||||||||||||||||||| ||||||||||||||||||||    
T  12768998 -atttgaatttccttaagtttataatttacattcataaaatttcttgttttcattttgattgttcaattttgtcgttccaaactgccgcatttttcaatt 12768900  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  12768899 ttcgtgagaatcgtc 12768885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 339 - 463
Target Start/End: Complemental strand, 48128587 - 48128463
Alignment:
Q  339 aaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    ||||||||||||||||||||||| ||||||||||||||||||   | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  48128587 aaatttatcagttatattcataaaatttattcctcccattttgatttttcaattttgtcgctcccaactgccgtatttttcaattttcgtgagaatcgtc 48128488  T
Q  439 atgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||    
T  48128487 atgatttcaaatatcgtgagaattg 48128463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 224 - 366
Target Start/End: Original strand, 29648645 - 29648787
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||    
T  29648645 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaagttcttt 29648744  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    ||| ||||||| ||||||||||||| ||  |||||||| ||||    
T  29648745 catttgaatgtccttaaatttatcaatttcattcataaaattt 29648787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 224 - 379
Target Start/End: Complemental strand, 46464059 - 46463900
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgct----tagaacaattaaaatttcacatcaaattt 319  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||| || ||||||||  ||    |||||||||||||||||||||||||||||    
T  46464059 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttagactacatgactgactgacttagaacaattaaaatttcacatcaaattt 46463960  T
Q  320 ctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattt 379  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||| |||| ||  ||||||||    
T  46463959 ctttcatctgaatgtccttaattttatcatttacattcataaaatttcttattcccattt 46463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 7556956 - 7556852
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  7556956 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 7556857  T
Q  321 tttca 325  Q
    |||||    
T  7556856 tttca 7556852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 398
Target Start/End: Complemental strand, 9135313 - 9135142
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||       
T  9135313 taatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttc--- 9135217  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcg 398  Q
     || ||||||| ||||| ||||| | ||| |||||||| |||| ||  ||| |||||   |||||||||||||||    
T  9135216 aatttgaatgtccttaagtttataatttacattcataaaatttcttgttcctattttgattgttcaattttgtcg 9135142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 44512378 - 44512254
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| || |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||    
T  44512378 ttatattaaagtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaat 44512283  T
Q  343 ttatcagttatattcataagatttattcc 371  Q
    | |||| ||| |||||||| |||||||||    
T  44512282 tcatcatttacattcataaaatttattcc 44512254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 29521872 - 29521759
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  29521872 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 29521777  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  29521776 attcataaaatttcttcc 29521759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 48128660 - 48128586
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaa 295  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| | ||||||||    
T  48128660 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgattggcttagaa 48128586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 5327554 - 5327430
Alignment:
Q  314 aaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgca 413  Q
    |||||||||||||| ||| || |||| |||||||||||| ||||| || | |||||| |||||||||   ||||||||||||||||||| | ||| | ||    
T  5327554 aaatttctttcatccgaacgtccttacatttatcagttacattcaaaaaaattattcttcccattttgattgttcaattttgtcgttccaagctgacaca 5327455  T
Q  414 tttttcaattttcgtgagaatcgtc 438  Q
     |||||||||||| |||||||||||    
T  5327454 attttcaattttcatgagaatcgtc 5327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 12768284 - 12768415
Alignment:
Q  239 ttaattatatttaaatgttcaa---tcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtt 335  Q
    ||||||||||| | ||||||||   ||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| ||||     
T  12768284 ttaattatattaagatgttcaaatatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtc 12768379  T
Q  336 cttaaatttatcagttatattcataagatttattcc 371  Q
    |||||||| |||| ||| |||||||| |||||||||    
T  12768380 cttaaattcatcacttacattcataaaatttattcc 12768415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 24781126 - 24781239
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  24781126 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattaatcatttac 24781221  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  24781222 attcataaaatttcttcc 24781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 33704662 - 33704775
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  33704662 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 33704757  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  33704758 attcataaaatttcttcc 33704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 36307904 - 36308017
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  36307904 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 36307999  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  36308000 attcataaaatttcttcc 36308017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 36730728 - 36730841
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || || || |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  36730728 tgttcaatcttaattaatttacaccacaagact----tataataaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 36730823  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  36730824 attcataaaatttcttcc 36730841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 14488769 - 14488661
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  14488769 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 14488674  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  14488673 attcataaaattt 14488661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 29649654 - 29649526
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| | ||||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||  |||| |||    
T  29649654 ttaattatattaagatgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatcttgatgtcctt 29649559  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| | | |||||||| |||| ||||    
T  29649558 aaattcatcactaacattcataaaatttcttcc 29649526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 10772795 - 10772908
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  10772795 tgttcaatcttaattaatttacactacaaaact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 10772890  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  10772891 attcataaaatttcttcc 10772908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 35954479 - 35954592
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||| | ||    |||| ||||| |||||||| ||||||||||||| ||||||| |||| |||||||| |||| |||     
T  35954479 tgttcaatcttaattaatttacaccataaga----cttataacaaataaaattttacatcaaatttctgtcatctggatgtacttaaattcatcacttac 35954574  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  35954575 attcataaaatttcttcc 35954592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 48127836 - 48127949
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||| || |||| |||||||| |||| |||     
T  48127836 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcatttac 48127931  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  48127932 attcataaaatttcttcc 48127949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 31030152 - 31030260
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||  |||| ||||||||||||| |||     
T  31030152 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttatttcatctcgatgtccttaaatttatcatttac 31030247  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  31030248 attcataaaattt 31030260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 7152986 - 7153089
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  7152986 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 7153081  T
Q  354 attcataa 361  Q
    ||||||||    
T  7153082 attcataa 7153089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 413 - 463
Target Start/End: Complemental strand, 24781798 - 24781748
Alignment:
Q  413 atttttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24781798 atttttcaattttcgtgagaatcgtcatgatttcaaatatcatgagaattg 24781748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 33006407 - 33006294
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||||||||    || ||||| ||||||||  |||||||||||||||||||| |||| || |||||  ||| |||     
T  33006407 tgttcaatcttaattaatttacactacatgact----tataacaaataaaattttgcatcaaatttctttcatctggatgtcctcaaattcttcacttac 33006312  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  33006311 attcataaaatttcttcc 33006294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 25655897 - 25656025
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||| ||||||||||||||||||| ||| ||    |||| ||||| |||||||| ||||||| ||| ||||||||| |||| |||    
T  25655897 ttaattatattaaggtgtttaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaattttttttcatctggatgtcctt 25655992  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||| ||||    
T  25655993 aaattcatcacttacattcataaaatttcttcc 25656025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 51086838 - 51086926
Alignment:
Q  256 ttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatca 348  Q
    |||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||| | |||| |||||||| ||||    
T  51086838 ttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatccggatgtccttaaattcatca 51086926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 7556324 - 7556416
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagtta 352  Q
    |||||||||| ||||||||||||||||| ||||    || |||||  |||| || |||||||||||||||||||||||||| |||||||| ||||||||    
T  7556324 tgttcaatctaaattaatttacaccacaagact----tataacaa--aaaaatttacatcaaatttctttcatctgaatgtccttaaattcatcagtta 7556416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 46118284 - 46118412
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |   ||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| | ||||||||| ||| || || |||| |||    
T  46118284 ttaattatattaaggggttcaatcttaattaatttacactacagga----cttataacaaataaaattttaaatcaaatttatttaatttggatgtcctt 46118379  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||||||||    
T  46118380 aaattcatcacttacattcataaaatttattcc 46118412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 325
Target Start/End: Complemental strand, 30838656 - 30838589
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttca 325  Q
    |||||||||||||||||||||||| ||||||    |||| ||||| |||||||| |||||||||||||||||    
T  30838656 tgttcaatcttaattaatttacactacatga----cttataacaaataaaattttacatcaaatttctttca 30838589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 5326765 - 5326889
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacat-gactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttct 337  Q
    ||||||||||| |  |||||||||||||||||||||||| |||  ||||    || ||||| |||||||| |||||||||||||||||||   ||||  |    
T  5326765 ttaattatattaaggtgttcaatcttaattaatttacactacaaagact----tataacaaataaaattttacatcaaatttctttcatccagatgtctt 5326860  T
Q  338 taaatttatcagttatattcataagattt 366  Q
    |||||| |||| ||| |||||||| ||||    
T  5326861 taaattcatcacttacattcataaaattt 5326889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 5328034 - 5327984
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaattta 274  Q
    |||||||||||| |||||||||||||||  ||||||||| |||||||||||    
T  5328034 taatgtaatatttccttaattatatttaggtgttcaatcataattaattta 5327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 7153215 - 7153265
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  7153215 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 7153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 29648917 - 29648971
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    ||||||||||| ||||||  || || |||| ||||||||||||||||||||||||    
T  29648917 tgttcaattttatcgttctaaattgtcgcagttttcaattttcgtgagaatcgtc 29648971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 440
Target Start/End: Original strand, 10773024 - 10773080
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcat 440  Q
    ||||||||||||||||||| || ||||| | ||| ||||| |||||||||| |||||    
T  10773024 tgttcaattttgtcgttccaaattgccgtaatttccaattatcgtgagaattgtcat 10773080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 440
Target Start/End: Original strand, 35954709 - 35954765
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcat 440  Q
    ||||||||||||||||||| |||||||| | ||| ||||| | |||||||| |||||    
T  35954709 tgttcaattttgtcgttccaaactgccgtagtttccaattatagtgagaattgtcat 35954765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 638139 - 638381
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  638139 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 638238  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  638239 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 638338  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  638339 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 638381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 38060336 - 38060578
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||    
T  38060336 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttacaacaattaaaatttcacatcaaatttc 38060435  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  38060436 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 38060535  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38060536 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 38060578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 222 - 463
Target Start/End: Original strand, 26949942 - 26950183
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  26949942 cataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct 26950041  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  26950042 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 26950141  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26950142 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 26950183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 277713 - 277468
Alignment:
Q  221 ccataatgtaatattgccttaattat---atttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||    
T  277713 ccataatgtaatattgccttaattattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaat 277614  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  277613 ttctttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttt 277514  T
Q  418 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  277513 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 277468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 823942 - 824187
Alignment:
Q  221 ccataatgtaatattgccttaattat---atttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||||||||||||||   |||||  |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||    
T  823942 ccataatgtaatattgccttaattattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaat 824041  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  824042 ttctttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttt 824141  T
Q  418 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  824142 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 824187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 15882529 - 15882771
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  15882529 ccataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 15882628  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
     ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  15882629 attcatctgaatgtccttaaatttatcagttaaattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 15882728  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  15882729 attttcgtgagaatcgtcatgattttaaatatcgtgagaattg 15882771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 44257068 - 44256826
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  44257068 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttc 44256969  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||   |||||||||||||||||||||||||| ||||||||||    
T  44256968 tttcatctgaatgtccttaaatttatcagttatactcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgctgcatttttca 44256869  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  44256868 attttcgtaagaatcgtcatgatttcaaatatcgtgagaattg 44256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 27913370 - 27913126
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  27913370 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcatatcaaatttc 27913271  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||||||||||||||||  |||||||||||    
T  27913270 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattccccccattttgattgttcaattttgtcgttcccaactatcgcatttttca 27913171  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  27913170 attttcgtgaaaatcgtcatgatttcaaatatcgttagaattgtc 27913126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 27959789 - 27959545
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  27959789 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcatatcaaatttc 27959690  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||   ||||||||||||||||||||||||  |||||||||||    
T  27959689 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattccccccattttgattgttcaattttgtcgttcccaactatcgcatttttca 27959590  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  27959589 attttcgtgaaaatcgtcatgatttcaaatatcgttagaattgtc 27959545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 222 - 465
Target Start/End: Original strand, 23346259 - 23346502
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||| || || ||||||||||||||  |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  23346259 cataatgtattactgtcttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttataacaattaaaatttcacatcaaatttct 23346358  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  23346359 ttcacctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 23346458  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  23346459 ttttcgtgagaatcgtcatgattttaaatatcatgagaattgtc 23346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 18956427 - 18956184
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||| ||||||||||||   |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  18956427 ccataatgtaatattgcgttaattatattttggtgttcaatcttaattaatttacacgacaagactgacttagaacaattaaaatttcacatcaaatttc 18956328  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||| |||||||||||| ||||||||||    
T  18956327 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgttgttcccaactgctgcatttttca 18956228  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  18956227 attttcgtg-gaatcgtcatgatttcaaatatcgtgagaattgtc 18956184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 222 - 462
Target Start/End: Complemental strand, 41545812 - 41545573
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  41545812 cataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct 41545713  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||| ||||||||||||||||| | || |||||||||||||   ||| ||||||||||||| ||| ||||||||||||||||    
T  41545712 ttcatctgaatgtccttaaattaatcagttatattcataa-aattcttcctcccattttgattgtgcaattttgtcgtttccagctgccgcatttttcaa 41545614  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 462  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41545613 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 41545573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 218 - 438
Target Start/End: Original strand, 40303456 - 40303676
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  40303456 gatccataatgtaatcttgccttaattatatttaggtgttcagtcttaattaatttacactacatgactagcttagaacaattaaaatttcacatcaaat 40303555  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||   ||||||||||||||||||||||||| ||||||||    
T  40303556 ttctttcatctgaatgtccttaaatttatcagttatattcataaaatttatttttcccattttgattgttcaattttgtcgttcccaactgtcgcatttt 40303655  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    |||||||||||||||||||||    
T  40303656 tcaattttcgtgagaatcgtc 40303676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 221 - 438
Target Start/End: Complemental strand, 36192405 - 36192188
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  36192405 ccataatgtaatattgccttaattatatttaagtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 36192306  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||| ||||| | |||||||||||| ||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  36192305 tttcatatgaatatccttaaatttatcggttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 36192206  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||| ||||||||||||    
T  36192205 atttttgtgagaatcgtc 36192188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 221 - 438
Target Start/End: Complemental strand, 39858964 - 39858747
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||    
T  39858964 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactaaatgactggcttagaacaattaaaatttcacatcaaatttc 39858865  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||| |||||| ||||    
T  39858864 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgtcgcattattca 39858765  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  39858764 attttcgtgagaatcgtc 39858747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 30555780 - 30555994
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  30555780 taatgtaatcttgacttaattatatttagttgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttcttt 30555879  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||| ||||||||||||||| ||||    
T  30555880 catctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccgcattttttaatt 30555979  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  30555980 ttcgtgagaatcgtc 30555994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 223 - 436
Target Start/End: Original strand, 43694257 - 43694470
Alignment:
Q  223 ataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctt 322  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  43694257 ataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttctt 43694356  T
Q  323 tcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaat 422  Q
    |||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||| ||||||||||||||||||||||| | |    
T  43694357 tcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttttcgttcccaactgccgcattttttatt 43694456  T
Q  423 tttcgtgagaatcg 436  Q
    ||||||||||||||    
T  43694457 tttcgtgagaatcg 43694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 221 - 440
Target Start/End: Complemental strand, 6095779 - 6095561
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||| |||||||||||||| | ||||||||||    
T  6095779 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttaaaacaattaaaattttagatcaaatttc 6095680  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||  |||| ||| |||||||||   ||||||||||||||||||||||||||||||||||||     
T  6095679 tttcatctgaatgtccttaaatttatcagttatattcatacaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttc- 6095581  T
Q  421 attttcgtgagaatcgtcat 440  Q
    ||||||||||||||||||||    
T  6095580 attttcgtgagaatcgtcat 6095561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 221 - 435
Target Start/End: Complemental strand, 42736560 - 42736346
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||| | |  ||||||||||||||||||||||||||||||||    
T  42736560 ccataatgtaattttgccttaattatatttaggtgttcaatcttaattaatttacactacataattgacttagaacaattaaaatttcacatcaaatttc 42736461  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||| |||||||||||||||||||    
T  42736460 tttcatctgaatgtctttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttaccaactgccgcatttttca 42736361  T
Q  421 attttcgtgagaatc 435  Q
    |||||||||||||||    
T  42736360 attttcgtgagaatc 42736346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 45408323 - 45408537
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  45408323 taatgtaatcttgacttaattatatttaggtgttcaatcttaattaatttacactacatgactggcatagaacaattaaaatttcacatcaaatttcttt 45408422  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||| | ||||||||||||||| ||||    
T  45408423 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgtttcaaactgccgcattttttaatt 45408522  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  45408523 ttcgtgagaatcgtc 45408537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 222 - 438
Target Start/End: Original strand, 13140404 - 13140620
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||| ||| ||||  |||||||||||||||||||||||||||||||||    
T  13140404 cataatgtaatcttgccttaattatatttaggtgttcaatcttaattaacttacactacaggactgacttagaacaattaaaatttcacatcaaatttct 13140503  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||   ||||||||||| ||||| ||||||||||||||||| ||    
T  13140504 ttcatctggatgtccttaaatttatcagttatattcataaaatttattcttcccattttgattgttcaattttttcgtttccaactgccgcattttttaa 13140603  T
Q  422 ttttcgtgagaatcgtc 438  Q
    || ||||||||||||||    
T  13140604 ttgtcgtgagaatcgtc 13140620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 223 - 437
Target Start/End: Complemental strand, 3851000 - 3850786
Alignment:
Q  223 ataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctt 322  Q
    |||||||||| ||||||||||||||||||  |||| ||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||||||| ||    
T  3851000 ataatgtaatcttgccttaattatatttaggtgtttaatcttaattaatttacactacatgactgacttagaacatttaaaatttcacatcaaatttttt 3850901  T
Q  323 tcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaat 422  Q
    ||||||||| || |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||| ||| |||||||||    
T  3850900 tcatctgaaagtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgtcgcttttttcaat 3850801  T
Q  423 tttcgtgagaatcgt 437  Q
    |||||||||||||||    
T  3850800 tttcgtgagaatcgt 3850786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 224 - 438
Target Start/End: Complemental strand, 42646298 - 42646083
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||| ||| ||| ||||||||||||||  ||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  42646298 taatgcaatcttgacttaattatatttaggtgttcaatcctaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttcttt 42646199  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgca-tttttcaat 422  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| |||||||  | ||||| |||    
T  42646198 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccatatttttttaat 42646099  T
Q  423 tttcgtgagaatcgtc 438  Q
    |||||||| |||||||    
T  42646098 tttcgtgataatcgtc 42646083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 224 - 433
Target Start/End: Complemental strand, 30111708 - 30111499
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||| ||||||||||  ||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  30111708 taatgtaatcttgccttgattatatttaggtgttcaatcttaattaatttagactacatgactaacttagaacaattaaaatttcacatcaaatttcttt 30111609  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     |||||||||| ||||| ||||||| |||||||||||| |||| ||  ||||||||    ||||||||||||| ||||| ||||||||||||||||||||    
T  30111608 gatctgaatgtccttaagtttatcatttatattcataaaatttcttattcccatttcgattgttcaattttgttgttccaaactgccgcatttttcaatt 30111509  T
Q  424 ttcgtgagaa 433  Q
    || |||||||    
T  30111508 tttgtgagaa 30111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 18088629 - 18088843
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    |||| |||| ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||||||||    
T  18088629 taatataatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttcttt 18088728  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||| ||||| | ||||  ||||||| ||| |||||||| |||| ||  | |||||||   | ||||||||||||||||| ||||||||||||||||||||    
T  18088729 catatgaatatccttaggtttatcatttacattcataaaatttcttatttccattttgatttttcaattttgtcgttccaaactgccgcatttttcaatt 18088828  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  18088829 ttcgtgagaatcgtc 18088843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 224 - 434
Target Start/End: Complemental strand, 40617469 - 40617258
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||    
T  40617469 taatgtaattttgtcttaattatatttaggtgttcaaccttaattaatttacattacaagactcgcttagaacaattaaaatttcaaatcaaatttcttt 40617370  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgca-tttttcaat 422  Q
    ||||||||||| ||||||||||||||||| |||||||| || | ||| | || ||||   ||||||||||| ||||||| || ||||||| |||||||||    
T  40617369 catctgaatgtccttaaatttatcagttacattcataaaatgtcttctttccgttttgattgttcaattttatcgttccaaattgccgcattttttcaat 40617270  T
Q  423 tttcgtgagaat 434  Q
    |||| |||||||    
T  40617269 tttcatgagaat 40617258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 16096645 - 16096540
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  16096645 cataatgtaatattgccttaataatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttct 16096546  T
Q  322 ttcatc 327  Q
    ||||||    
T  16096545 ttcatc 16096540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 3850139 - 3850252
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  3850139 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 3850234  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  3850235 attcataaaatttcttcc 3850252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 13141266 - 13141158
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  13141266 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtacttaaattcatcacttac 13141171  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  13141170 attcataaaattt 13141158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 30105852 - 30105960
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||||||||    || ||||| |||||||| ||||||||||||||| |||||||||| |||||||| |||| |||     
T  30105852 tgttcaatcttaattaatttacactacatgact----tataacaaataaaattttacatcaaatttctttaatctgaatgtccttaaattcatcacttac 30105947  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  30105948 attcataaaattt 30105960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 4622704 - 4622591
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||     | ||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||| |||     
T  4622704 tgttcaatcttaattaatttacactacaagactg----ataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcatcatttac 4622609  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  4622608 attcataaaatttcttcc 4622591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 28085861 - 28085748
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | ||||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  28085861 tgttcaatcttaattaatttacactatatgact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 28085766  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  28085765 attcataaaatttcttcc 28085748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 43695128 - 43695015
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||||||| |||| |||     
T  43695128 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttac 43695033  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  43695032 attcataaaatttcttcc 43695015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 3705091 - 3704983
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  3705091 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 3704996  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  3704995 attcataaaattt 3704983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 23347124 - 23347021
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  23347124 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 23347029  T
Q  354 attcataa 361  Q
    ||||||||    
T  23347028 attcataa 23347021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 15883382 - 15883280
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  15883382 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 15883287  T
Q  354 attcata 360  Q
    |||||||    
T  15883286 attcata 15883280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 366
Target Start/End: Original strand, 18955358 - 18955464
Alignment:
Q  256 ttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatat 355  Q
    |||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||||||||||| ||| |||| |||| ||| ||    
T  18955358 ttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgaatgtccttgaattcatcatttacat 18955453  T
Q  356 tcataagattt 366  Q
    |||||| ||||    
T  18955454 tcataaaattt 18955464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 2082235 - 2082122
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  2082235 tgttcaatcttaattaatttacactacaaaact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 2082140  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  2082139 attcataaaatttcttcc 2082122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 17948454 - 17948341
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| ||||||||  ||| |||     
T  17948454 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcgtcatttac 17948359  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  17948358 attcataaaatttcttcc 17948341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 30556664 - 30556537
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| | | ||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  30556664 ttaattatattaagaagttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaaattt-tttcatctggatgtcctt 30556570  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||| ||||    
T  30556569 aaattcatcacttacattcataaaatttcttcc 30556537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 276844 - 276947
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  276844 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 276939  T
Q  354 attcataa 361  Q
    ||||||||    
T  276940 attcataa 276947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 639005 - 638902
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  639005 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 638910  T
Q  354 attcataa 361  Q
    ||||||||    
T  638909 attcataa 638902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 824811 - 824708
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  824811 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 824716  T
Q  354 attcataa 361  Q
    ||||||||    
T  824715 attcataa 824708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 5586957 - 5587080
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    |||||||||||||  |||||||||||||||||||||||| | | |    ||||| |||||||||||||||||||||| |||||||||| |  |||| |||    
T  5586957 ttaattatatttaggtgttcaatcttaattaatttacactatagg----gcttataacaattaaaatttcacatcaattttctttcatttagatgtcctt 5587052  T
Q  339 aaatttatcagttatattcataagattt 366  Q
    ||||  ||| |||| |||||||| ||||    
T  5587053 aaatccatcggttacattcataaaattt 5587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 44256205 - 44256319
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||  |||| |||||||| |||| |||     
T  44256205 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttttttcatctagatgtccttaaattcatcatttac 44256300  T
Q  354 attcataagatttattcct 372  Q
    |||||||| |||| |||||    
T  44256301 attcataaaatttcttcct 44256319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 16096021 - 16096134
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    ||  |||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  16096021 tgttcaatcttaattaatttacactacaagact----tatgacaaataaaattttacatcaaatttctttcatctggatgtgcttaaattcatcatttac 16096116  T
Q  354 attcataagatttattcc 371  Q
    ||| |||| |||| ||||    
T  16096117 atttataaaatttcttcc 16096134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 25583562 - 25583449
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||| |||||||||||||||  |||| |||||||| |||| |||     
T  25583562 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacataaaatttctttcatctagatgtccttaaattcatcatttac 25583467  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  25583466 attcataaaatttcttcc 25583449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 39858122 - 39858235
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||| ||||||||||||||  |||    || | ||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  39858122 tgttcaatcttaactaatttacaccacaaaact----tatagcaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 39858217  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  39858218 attcataaaatttcttcc 39858235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 41545084 - 41545197
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | || |    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  41545084 tgttcaatcttaattaatttacactataagatt----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 41545179  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  41545180 attcataaaatttcttcc 41545197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 42735706 - 42735819
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||| ||||||||| ||||    || ||||  |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  42735706 tgttcaatcttaattaatctacaccacaagact----tataacagataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 42735801  T
Q  354 attcataagatttattcc 371  Q
    ||| |||| |||| ||||    
T  42735802 atttataaaatttcttcc 42735819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 6093436 - 6093549
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||| || || |||| |||||||| |||| |||     
T  6093436 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttcttttatttggatgtccttaaattcatcatttac 6093531  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  6093532 attcataaaatttcttcc 6093549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 40304300 - 40304228
Alignment:
Q  294 aacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| |||||||| ||||    
T  40304300 aacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaaattt 40304228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 27912506 - 27912619
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    ||  |||| |||||||| ||||||||||| ||||||||  || | |||||||| |||| |||     
T  27912506 tgttcaatcttaattaatttacactacaagact----tatgacaaataaaattttacatcaaatttatttcatctagatatccttaaattcatcatttac 27912601  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27912602 attcataaaatttcttcc 27912619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 27958925 - 27959038
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    ||  |||| |||||||| ||||||||||| ||||||||  || | |||||||| |||| |||     
T  27958925 tgttcaatcttaattaatttacactacaagact----tatgacaaataaaattttacatcaaatttatttcatctagatatccttaaattcatcatttac 27959020  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27959021 attcataaaatttcttcc 27959038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 4622475 - 4622425
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  4622475 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtgagaat 4622425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 18955585 - 18955635
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  18955585 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtgagaat 18955635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 25583333 - 25583283
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  25583333 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtgagaat 25583283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 361
Target Start/End: Complemental strand, 38576964 - 38576905
Alignment:
Q  302 aaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataa 361  Q
    |||||| ||||||||||||||||||||  |||| |||||||| |||| ||| ||||||||    
T  38576964 aaattttacatcaaatttctttcatctcgatgtccttaaattcatcacttacattcataa 38576905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 277073 - 277123
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  277073 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 277123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 638776 - 638726
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  638776 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 638726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 824582 - 824532
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  824582 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 824532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 2082006 - 2081956
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||    
T  2082006 tgttcaattttgtcgttccaaattgccgcaattttcaattaccgtgagaat 2081956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 3850368 - 3850418
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  3850368 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 3850418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 13141047 - 13140997
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| | |||||||| ||||||||| | ||||||||    
T  13141047 tgttcaattttgtcgttccaatctgccgcagttttcaattatagtgagaat 13140997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 39858317 - 39858367
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  39858317 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 39858367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 40304107 - 40304057
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  40304107 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 40304057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 41545313 - 41545363
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  41545313 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 41545363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 44256434 - 44256484
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  44256434 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 44256484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 17981338 - 17981301
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttaca 276  Q
    |||||||||||||  |||||||||||||||||||||||    
T  17981338 ttaattatatttaggtgttcaatcttaattaatttaca 17981301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 18089407 - 18089325
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttca 325  Q
    ||||||||||| |  || |||||| |||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||    
T  18089407 ttaattatattaaggtgctcaatcataattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttca 18089325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 52448325 - 52448083
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  52448325 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 52448226  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  52448225 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 52448126  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  52448125 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 52448083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 20342451 - 20342695
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||     
T  20342451 ccataatgtaatatcgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaattta 20342550  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  20342551 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttaattgttcaattttgtcgttcccaactgccgcatttttca 20342650  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20342651 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 20342695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 4653908 - 4653666
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| | |||||||||||||||||||||||||||||||    
T  4653908 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggacttggttagaacaattaaaatttcacatcaaatttc 4653809  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  4653808 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 4653709  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  4653708 attttcgtgagaatcgccatgatttcaaatatcgtgagaattg 4653666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 16665596 - 16665354
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||    
T  16665596 ccataatgtaatattgccttaattatatttaggcgttcaatcttaattaatttacgctacaggactggcttagaacaattaaaatttcacatcaaatttc 16665497  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  16665496 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 16665397  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16665396 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 16665354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 23418414 - 23418656
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||| ||||||||||||||||||| ||  |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  23418414 ccataatgcaatattgccttaattatatctaggtgttcaatcttaattaatttacagtacatgacttgcttagaacaattaaaatttcacatcaaatttc 23418513  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  23418514 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 23418613  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23418614 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 23418656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 20353176 - 20353420
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||     
T  20353176 ccataatgtaatatcgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttt 20353275  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  20353276 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttaattgttcaattttgtcgttcccaactgccacatttttca 20353375  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20353376 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 20353420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 221 - 464
Target Start/End: Complemental strand, 54920335 - 54920092
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||||||||||||    
T  54920335 ccataatataatattgccttaattatatttaggtgttcaatcttaattaatttacactacaagaccggcttaaaacaattaaaatttcacatcaaatttc 54920236  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  54920235 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 54920136  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54920135 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 54920092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 7488202 - 7487960
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  7488202 ccataatataatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 7488103  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||    
T  7488102 tttcatctgaatgcatttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaatttcgtcgttcccaactgccgcatttttca 7488003  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7488002 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 7487960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 222 - 465
Target Start/End: Complemental strand, 17362037 - 17361794
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | | || | ||||||||||||||||||||||||||||||||||    
T  17362037 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactataggattggcttagaacaattaaaatttcacatcaaatttct 17361938  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||    
T  17361937 ttcatctgaatgtccttaaatttatcacttatattcataaaatttattcatcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 17361838  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  17361837 ttttcgtgagaatcgtcatgattttaaatatcgttagaattgtc 17361794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 3034927 - 3035169
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||||||| || ||| ||||  |  |||||||||||||||||||||||||||||    
T  3034927 ccataatgtaatattgccttacttatatttaggtgttcaatcttaattaatttatacgacaggactgac--agaacaattaaaatttcacatcaaatttc 3035024  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  3035025 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccacatttttca 3035124  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  3035125 attttcgtgagaatcgtcatgatttcaaatatcatgagaattgtc 3035169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 241 - 465
Target Start/End: Original strand, 41040676 - 41040900
Alignment:
Q  241 aattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaa 340  Q
    |||||||||||  |||||||| ||||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  41040676 aattatatttaggtgttcaattttaattaatttacactacaggactggcttagaataattaaaatttcacatcaaatttctttcatctgaatgtccttaa 41040775  T
Q  341 atttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcat 440  Q
    ||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41040776 atttatcagttatattcataaaatttattcctaccattttgattgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcat 41040875  T
Q  441 gatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||    
T  41040876 gatttcaaatatcgtgagaattgtc 41040900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 20786203 - 20786447
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||| ||| |||   ||||||||||||||||||||||||||||||||    
T  20786203 ccataatgtaatattgcattaattatatttaggtgttcaatcttaattaatttgcactacaagaccgacttagaacaattaaaatttcacatcaaatttc 20786302  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||| || |||||||| ||||||||||    
T  20786303 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcatttccaactgctgcatttttca 20786402  T
Q  421 attttcgtgag--aatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||  ||||||||||||||||||||||||||||||||    
T  20786403 attttcgtgagataatcgtcatgatttcaaatatcgtgagaattg 20786447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 222 - 465
Target Start/End: Complemental strand, 46718653 - 46718401
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  46718653 cataatgtaatattgccttaattatattcaggtgttcaatcttaattaatttacactacatgactggcttaaaacaattaaaatttcacatcaaatttct 46718554  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||     
T  46718553 ttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttcat 46718454  T
Q  422 ttttcgtgagaatcgtca---------tgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||||||||||         ||||||||||||||||||||||||||    
T  46718453 ttttcgtgagaatcgtcatcgttcgtttgatttcaaatatcgtgagaattgtc 46718401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 221 - 438
Target Start/End: Complemental strand, 35825481 - 35825264
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| || |||||||||||||||  |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  35825481 ccataatgtaatcttaccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttc 35825382  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||| ||||||||    
T  35825381 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgtatttttca 35825282  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  35825281 attttcgtgagaatcgtc 35825264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 13533670 - 13533887
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| | | |||| ||||||||||||||||||||||||| |  |||     
T  13533670 ccataatgtaattttgccttaattatatttaggtgttcaatcttaattaatttacactataagactggcttagaacaattaaaatttcacataatttttt 13533769  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  13533770 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 13533869  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  13533870 attttcgtgagaatcgtc 13533887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 221 - 438
Target Start/End: Complemental strand, 49874681 - 49874464
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||  ||||||||||| ||||||||||||    
T  49874681 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagattaattaaaattttacatcaaatttc 49874582  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||| ||| |||||||||   ||||||||||||| ||||||||||||||||||||| |    
T  49874581 tttcatctgaatgtccttaaaattatcagttatattcataaaatttcttcttcccattttgattgttcaattttgttgttcccaactgccgcatttttta 49874482  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  49874481 attttcgtgagaatcgtc 49874464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 218 - 438
Target Start/End: Original strand, 31291793 - 31292013
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||| |||||||  |||||||||||||||||||  |||||||||||||||||||||||| | | ||||  |||||||||||||||||||||||||||||    
T  31291793 gatccttaatgtatcattgccttaattatatttaggtgttcaatcttaattaatttacactaaaggactgacttagaacaattaaaatttcacatcaaat 31291892  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| |||| ||| ||| |||||   |||||||||||||||||||||||||| |||||||    
T  31291893 ttctttcatctgaatgtccttaaatctatcagttatattcataaaatttcttcttcctattttgattgttcaattttgtcgttcccaactgctgcatttt 31291992  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    ||||||||| |||||||||||    
T  31291993 tcaattttcatgagaatcgtc 31292013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 221 - 435
Target Start/End: Complemental strand, 35045906 - 35045692
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||| ||||  |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||||||||||     
T  35045906 ccataatgtaatcttgccttaattatgtttaggtgttcaatcttagttaatttacactacatgactgacttagaacaattaaaatttcacatcaaattta 35045807  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| | |||||||   ||||||||||||||||||||||||| ||||||||| |    
T  35045806 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttctttccattttgattgttcaattttgtcgttcccaactgtcgcatttttta 35045707  T
Q  421 attttcgtgagaatc 435  Q
    |||||| ||||||||    
T  35045706 attttcatgagaatc 35045692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 224 - 438
Target Start/End: Complemental strand, 34073947 - 34073731
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||||||    
T  34073947 taatgtaatcttgacttaattatatttatgtgttcaatcttaattaatttacactacataactagcttagaacaattaaaattacacatcaaatttcttt 34073848  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccg--catttttcaa 421  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| ||||||||  ||||||| ||    
T  34073847 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccgcacattttttaa 34073748  T
Q  422 ttttcgtgagaatcgtc 438  Q
    |||||||||||||||||    
T  34073747 ttttcgtgagaatcgtc 34073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 222 - 434
Target Start/End: Original strand, 23932658 - 23932872
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  ||||||||||| |||||||||||||||||||||    
T  23932658 cataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaataaaaatttcacatcaaatttct 23932757  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttccc--aactgccgcatttttc 419  Q
    |||| |||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||| ||||||||  |||||||||||||||     
T  23932758 ttcagctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttttcgttcccaaaactgccgcatttttt 23932857  T
Q  420 aattttcgtgagaat 434  Q
    |||||||||||||||    
T  23932858 aattttcgtgagaat 23932872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 27958593 - 27958807
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| | | ||||  ||||||||||||||||||||||||||||||||    
T  27958593 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactaaaggactgacttagaacaattaaaatttcacatcaaatttc 27958692  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| ||||||||||| | |||||||||||| ||   ||| |||||||||   |||||||||||| ||||||||||||||||||||||||    
T  27958693 tttcatctgaatgtccttaaatttataaattatattcataaaat---ttcttcccattttgattgttcaattttgacgttcccaactgccgcatttttca 27958789  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||| ||||||||||||    
T  27958790 atttttgtgagaatcgtc 27958807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 226 - 463
Target Start/End: Original strand, 50495374 - 50495613
Alignment:
Q  226 atgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttca 325  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||   |    
T  50495374 atgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct---a 50495470  T
Q  326 tctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatttt 425  Q
    ||||||||| ||||| ||||| | ||| |||||||| |||| ||  || ||||||   |||| |||| ||||||||  ||||||||| ||||| ||||||    
T  50495471 tctgaatgtccttaagtttataatttacattcataaaatttcttgttctcattttgattgttaaattatgtcgttctaaactgccgctttttttaatttt 50495570  T
Q  426 cgtgagaatcgtc-----atgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||      ||||| ||||||||||||||||||    
T  50495571 cgtgagaatcgtcgtcgtttgattccaaatatcgtgagaattg 50495613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 222 - 353
Target Start/End: Original strand, 9368002 - 9368133
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   | |||| ||||||||||||||||||||||||||||||||||    
T  9368002 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactgtacgactggcttagaacaattaaaatttcacatcaaatttct 9368101  T
Q  322 ttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||| ||||||||||||||||||    
T  9368102 ttcatctgaatgtccttaaatttatcagttat 9368133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 221 - 352
Target Start/End: Original strand, 30824791 - 30824922
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  30824791 ccataatgtaatattgccttaattatatttaggcgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttt 30824890  T
Q  321 tttcatctgaatgttcttaaatttatcagtta 352  Q
    |||||| ||||||| || |||||||| |||||    
T  30824891 tttcatttgaatgtcctcaaatttattagtta 30824922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 352 - 465
Target Start/End: Original strand, 30826745 - 30826858
Alignment:
Q  352 atattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcatgatttcaaata 451  Q
    |||||||||| ||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  30826745 atattcataaaatttattcctcccattttgattgttcaattttgtcgttctcaactgccgcatttttcaatttttgagagaatcgtcatgatttcaaata 30826844  T
Q  452 tcgtgagaattgtc 465  Q
    ||||||||||||||    
T  30826845 tcgtgagaattgtc 30826858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 55450501 - 55450607
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  55450501 ccataatgtaatattgccttaataatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 55450600  T
Q  321 tttcatc 327  Q
    |||||||    
T  55450601 tttcatc 55450607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 13534539 - 13534426
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  13534539 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 13534444  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  13534443 attcataaaatttcttcc 13534426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 17361213 - 17361326
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||||||||||| |||||||| |||| |||     
T  17361213 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcatttac 17361308  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  17361309 attcataaaatttcttcc 17361326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 16664732 - 16664845
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  16664732 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 16664827  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  16664828 attcataaaatttcttcc 16664845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 49873807 - 49873915
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  49873807 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 49873902  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  49873903 attcataaaattt 49873915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 3035789 - 3035676
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  3035789 tgttcaatcttaattaatttacactaaaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 3035694  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  3035693 attcataaaatttcttcc 3035676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 4653044 - 4653157
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| || |||||||||||||||||| |||| |||||||| |||| |||     
T  4653044 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacgtcaaatttctttcatctggatgtccttaaattcatcatttac 4653139  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  4653140 attcataaaatttcttcc 4653157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 35824609 - 35824722
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| |||||||||||||||||||   |||| |||||||| |||| |||     
T  35824609 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatccagatgtccttaaattcatcacttac 35824704  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  35824705 attcataaaatttcttcc 35824722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 371
Target Start/End: Complemental strand, 20354061 - 20353937
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| | ||||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||| ||||||||||||||||| ||||  ||||||    
T  20354061 ttatattaagatgttcaatcttaattaatttacactacaagact----tataacaaataaaatttaacaacaaatttctttcatctggatgtctttaaat 20353966  T
Q  343 ttatcagttatattcataagatttattcc 371  Q
    | |||| ||| |||||||| |||| ||||    
T  20353965 tcatcatttacattcataaaatttcttcc 20353937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 361
Target Start/End: Original strand, 31309702 - 31309818
Alignment:
Q  241 aattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaa 340  Q
    ||||||||| |  ||||| |||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||    
T  31309702 aattatattaaggtgttcgatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaa 31309797  T
Q  341 atttatcagttatattcataa 361  Q
    ||| |||| ||| ||||||||    
T  31309798 attcatcacttacattcataa 31309818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 371
Target Start/End: Original strand, 34073090 - 34073217
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||||||| ||    |||| ||||| |||||||| |||||||| || ||||||||| |||| |||    
T  34073090 ttaattatattaaggtgttcaatcttaattaatttacaccacaaga----cttataacaaataaaattttacatcaaaatt-tttcatctggatgtcctt 34073184  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||| ||||    
T  34073185 aaattcatcacttacattcataaaatttcttcc 34073217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 371
Target Start/End: Original strand, 7487392 - 7487469
Alignment:
Q  294 aacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||| |||| ||| |||||||| |||| ||||    
T  7487392 aacaaataaaatttcacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttcc 7487469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 8939488 - 8939601
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | |  |||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  8939488 tgttcaatcttaattaatttacactataatact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 8939583  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  8939584 attcataaaatttcttcc 8939601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 20787010 - 20786897
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||  |||| |||||||| || | |||     
T  20787010 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcattatttac 20786915  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  20786914 attcataaaatttcttcc 20786897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 23419280 - 23419167
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||  |||| |||||||| |||| |||     
T  23419280 tgttcaatcttaattaatttacactacaagact----tataataaataaaattttacatcaaatttctttcatctcgatgtccttaaattcatcatttac 23419185  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  23419184 attcataaaatttcttcc 23419167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 46717781 - 46717894
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||| ||||  ||||||| |||| |||     
T  46717781 tgttcaatcttaattaatttacactacaagact----tataataaataaaattttacatcaaatttctttcatctggatgtcattaaattcatcatttac 46717876  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  46717877 attcataaaatttcttcc 46717894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 52447461 - 52447574
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| |||||| || |||| |||||||| |||| |||     
T  52447461 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttatttcatatggatgtccttaaattcatcatttac 52447556  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  52447557 attcataaaatttcttcc 52447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 54919470 - 54919583
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||  |||||||| ||||||||||||||||||||  |||| |||||||| |||| |||     
T  54919470 tgttcaatcttaattaatttacactacaagact----tataacagataaaattttacatcaaatttctttcatcttgatgtccttaaattcatcatttac 54919565  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  54919566 attcataaaatttcttcc 54919583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 23933530 - 23933427
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||||||||| |||||| ||||    || ||||| |||||||| |||||||||||||||||| || |||| |||||||| |||| |||     
T  23933530 tgttcaatcttaattaatttataccacaagact----tataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcacttac 23933435  T
Q  354 attcataa 361  Q
    ||| ||||    
T  23933434 atttataa 23933427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 49970199 - 49970096
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||| |||||||||| ||| || |    || || || |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||||    
T  49970199 tgttcaatcttaaataatttacactacaagatt----tataaaaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttat 49970104  T
Q  354 attcataa 361  Q
    ||||||||    
T  49970103 attcataa 49970096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 30827478 - 30827365
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||| |||||||| ||| ||||    || ||||| |||||||| ||||||||||||||| ||||  |||| |||||||| |||| |||     
T  30827478 tgttcaatcttaattgatttacactacaagact----tataacaaataaaattttacatcaaatttcttttatctagatgtccttaaattcatcatttac 30827383  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  30827382 attcataaaatttcttcc 30827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 31292577 - 31292476
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||| |||||||||||||| ||| ||||    || ||||| |||| ||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  31292577 tgttcaatcctaattaatttacactacaagact----tataacaaataaatttttacatcaaatttctttcatctggatgtccttaaattcatcatttac 31292482  T
Q  354 attcat 359  Q
    ||||||    
T  31292481 attcat 31292476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 20343089 - 20343039
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||||||||    
T  20343089 tgttcaattttgtcgttccaaattgccgcaatttccaattttcgtgagaat 20343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 20353813 - 20353763
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||||||||    
T  20353813 tgttcaattttgtcgttccaaattgccgcaatttccaattttcgtgagaat 20353763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 3035560 - 3035510
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  3035560 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 3035510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 16664961 - 16665011
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  16664961 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 16665011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 17361442 - 17361492
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  17361442 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 17361492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 27962190 - 27962140
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  27962190 tgttcaattttgtcgttccaaactgccgcagtttccaattatagtgagaat 27962140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 34073330 - 34073380
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  34073330 tgttcaattttgtcgttccaaactgccgcagtttccaattatagtgagaat 34073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 35045122 - 35045184
Alignment:
Q  309 acatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    ||||||||||||||||||||  |||| |||||||| |||| ||| |||||||| |||| ||||    
T  35045122 acatcaaatttctttcatctagatgtccttaaattcatcacttacattcataaaatttcttcc 35045184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 49874037 - 49874087
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  49874037 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 49874087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 49969970 - 49969920
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  49969970 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 49969920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 52447690 - 52447740
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  52447690 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 52447740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 54919699 - 54919749
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  54919699 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 54919749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 276
Target Start/End: Complemental strand, 14270012 - 14269975
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttaca 276  Q
    |||||||||||||||| | |||||||||||||||||||    
T  14270012 ttaattatatttaaatatacaatcttaattaatttaca 14269975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 27962375 - 27962311
Alignment:
Q  302 aaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    |||||| ||||||||||||||| ||||| || | |||||||| |||| ||| |||||||| ||||    
T  27962375 aaattttacatcaaatttcttttatctggatatccttaaattcatcatttacattcataaaattt 27962311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 35045288 - 35045336
Alignment:
Q  386 ttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  35045288 ttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 35045336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 55450867 - 55450811
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcat 440  Q
    ||||||||||||||||| | |||||||||| ||| ||||| | |||||||| |||||    
T  55450867 tgttcaattttgtcgtttcaaactgccgcagtttccaattatagtgagaattgtcat 55450811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 15421271 - 15421027
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  15421271 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 15421172  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  15421171 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 15421072  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  15421071 attttcgtaagaatcgtcatgatttcaaatatcgtgagaattgtc 15421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 37939586 - 37939830
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  37939586 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttagaacaattaaaatttcacatcaaatttc 37939685  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| ||||||| |||||||||||||||||    
T  37939686 tttcatctgaacgttcttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttttcgttccaaactgccgcatttttca 37939785  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37939786 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 37939830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 744690 - 744932
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||    
T  744690 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttataacaattaaaatttcacatcaaatttc 744789  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  744790 tttcatctgaatgtccttaaatttatcagttacattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 744889  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  744890 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 744932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 823928 - 824170
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  823928 ccataatgtaatattgccttaattatatttaagtgttcaatcttaattaatttacactacaggactcgcttagaacaattaaaatttcacatcaaatttc 824027  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||| |||| ||||||||||||||    
T  824028 tttcatctgaatgtacttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgtttccaattgccgcatttttca 824127  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||  |||||||||||||||||||||||||||||||||||    
T  824128 attttcacgagaatcgtcatgatttcaaatatcgtgagaattg 824170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 27019218 - 27019460
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  27019218 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaattta 27019317  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||| ||||||||||||    
T  27019318 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctaccattttgattgttcaattttgtcgttcccaactaccgcatttttca 27019417  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27019418 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 27019460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 221 - 462
Target Start/End: Original strand, 20545295 - 20545536
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  20545295 ccataatgtaatattaccttaattatatttaggtgttcaatcttaattaatttacactacaggactagcttagaacaattaaaatttcacatcaaatttc 20545394  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||    
T  20545395 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgtacccaactgccgcatttttca 20545494  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 462  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20545495 attttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 20545536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 12500328 - 12500086
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  12500328 ccataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 12500229  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||    
T  12500228 tttcatccgaatgtccttaaatttatcagttatattcataaaatttattcctctcattttgattgttcaattttgtcgttcccaactgccgcatttttca 12500129  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  12500128 attttcgtgagaatcatcatgatttcaaatatcgtgagaattg 12500086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 30130042 - 30130283
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  30130042 ccataatataatattgtcttaattatatttag-tgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 30130140  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  30130141 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcatcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 30130240  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30130241 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 30130283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 221 - 462
Target Start/End: Original strand, 42611350 - 42611591
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  42611350 ccataatgtaatattgccttaattatatttaggttttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 42611449  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||    
T  42611450 tttcatttgaatgtccttaaatttattagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactaccgcatttttca 42611549  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 462  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42611550 attttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 42611591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 9592728 - 9592486
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||||||||    
T  9592728 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacaccacaggactgacttagaacaattaaaattttacatcaaatttc 9592629  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||| ||||| ||||||| |||||||||||    
T  9592628 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttatcgttaccaactgtcgcatttttca 9592529  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  9592528 attttcgtgagaatcgtcatgattttaaatatcgtgagaattg 9592486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 19665881 - 19665639
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||| |||   ||||||||||||||||||||||||||||||||    
T  19665881 ccataatgtaatattgccttaattaaatttaggtgttcaatcttaattaatttgcactacaggaccgacttagaacaattaaaatttcacatcaaatttc 19665782  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  19665781 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 19665682  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  19665681 attttcatgagaatcgtcatgatttcaaatatcgtgagaattg 19665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 221 - 462
Target Start/End: Complemental strand, 39589360 - 39589120
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  39589360 ccataatgtaatattgccttaattatatttaggttttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 39589261  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  39589260 tttcatctaaatgtccttaaatttattagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 39589161  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaatt 462  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  39589160 attttcgtgag-atcgtcatgatttcaaatatcgtgagaatt 39589120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 222 - 440
Target Start/End: Complemental strand, 11985575 - 11985357
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||  ||| |||||||||||||||||||||||||||||||| |    
T  11985575 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacagaactggcttagaacaattaaaatttcacatcaaatttat 11985476  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||| | |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||| |||||||||||||||||||||||    
T  11985475 ttcatctgaatttccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcattcccaactgccgcatttttcaa 11985376  T
Q  422 ttttcgtgagaatcgtcat 440  Q
    |||||||||||||||||||    
T  11985375 ttttcgtgagaatcgtcat 11985357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 218 - 438
Target Start/End: Complemental strand, 37271348 - 37271128
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  |||||||||||||||||||| ||||||||    
T  37271348 gatccataatgtaaacttgccttaattatatttacgtgttcaatcttaattaatttacactacaagactgacttagaacaattaaaatttcgcatcaaat 37271249  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  37271248 ttctttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttt 37271149  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    | |||||||||||||||||||    
T  37271148 ttaattttcgtgagaatcgtc 37271128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 218 - 438
Target Start/End: Original strand, 13304540 - 13304760
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||| |||||||||  ||| |||| ||||||||||||||||||||||||||||||    
T  13304540 gatccataatgtaatcttgccttaattatatttaggtgttcaatcttaactaatttacattacaggactggcttagaacaattaaaatttcacatcaaat 13304639  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||| ||| |||||||||   ||||||||||||||||||| ||||||||||||||    
T  13304640 ttctttcatctgaatgtccttaaatttatcagttatatttataaaatttcttcttcccattttgattgttcaattttgtcgttcctaactgccgcatttt 13304739  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    ||||||||| |||||||||||    
T  13304740 tcaattttcctgagaatcgtc 13304760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 224 - 434
Target Start/End: Complemental strand, 27551708 - 27551498
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27551708 taatgtaatcttgacttaattatatttaggtgttcaatcctaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttcttt 27551609  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   |||||||||||||| |||| ||||||||||||||| ||||    
T  27551608 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcattccaaactgccgcattttttaatt 27551509  T
Q  424 ttcgtgagaat 434  Q
    |||||||||||    
T  27551508 ttcgtgagaat 27551498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 31551246 - 31551460
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||| ||| |||    
T  31551246 taatgtaatcttgacttaattatatttatgtgttcaatcttaattaatttacactacataactagcttagaacaattaaaatttcacatcaatttttttt 31551345  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |  | ||| |||||||||   ||||||||||||||||||| |||||||||||||||  |||    
T  31551346 catctgaatgtccttaaatttatcagttacattcataaaaaattttcttcccattttgattgttcaattttgtcgttccaaactgccgcatttttttatt 31551445  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  31551446 ttcgtgagaatcgtc 31551460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 9986437 - 9986651
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    |||||| || ||| ||||||||||||||  ||||||||| |||||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||    
T  9986437 taatgtgatcttgacttaattatatttaggtgttcaatcctaattaatttacactacatgactggcttataacgattaaaatttcacatcaaatttcttt 9986536  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||| ||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| |||||||||||||||  |||    
T  9986537 catctaaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccgcatttttttatt 9986636  T
Q  424 ttcgtgagaatcgtc 438  Q
    ||||| |||||||||    
T  9986637 ttcgttagaatcgtc 9986651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 332
Target Start/End: Original strand, 7180760 - 7180867
Alignment:
Q  225 aatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttc 324  Q
    |||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||    
T  7180760 aatgtaatcttgacttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttatttc 7180859  T
Q  325 atctgaat 332  Q
    ||||||||    
T  7180860 atctgaat 7180867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 7181056 - 7180928
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  7181056 ttaattatattaaggtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtcctt 7180961  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||||||||    
T  7180960 aaattcatcacttacattcataaaatttattcc 7180928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 243 - 361
Target Start/End: Complemental strand, 27020093 - 27019979
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| || |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||    
T  27020093 ttatattaaagtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaat 27019998  T
Q  343 ttatcagttatattcataa 361  Q
    | |||| ||| ||||||||    
T  27019997 tcatcatttacattcataa 27019979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 37270492 - 37270605
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| | ||||||||||||||||||| |||| |||||||| |||| |||     
T  37270492 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttatatcaaatttctttcatctggatgtccttaaattcatcacttac 37270587  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  37270588 attcataaaatttcttcc 37270605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 745557 - 745454
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  745557 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 745462  T
Q  354 attcataa 361  Q
    ||||||||    
T  745461 attcataa 745454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 27550828 - 27550951
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  27550828 ttaattatattaaggtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtcctt 27550923  T
Q  339 aaatttatcagttatattcataagattt 366  Q
    ||||| |||| ||| |||||||| ||||    
T  27550924 aaattcatcacttacattcataaaattt 27550951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 9591864 - 9591977
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||  ||||| ||||||| |||| |||     
T  9591864 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctagatgttgttaaattcatcatttac 9591959  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  9591960 attcataaaatttcttcc 9591977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 19665017 - 19665130
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| ||||  ||||||| |||| |||     
T  19665017 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtctttaaattcatcatttac 19665112  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  19665113 attcataaaatttcttcc 19665130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 20546139 - 20546026
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  20546139 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 20546044  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  20546043 attcataaaatttcttcc 20546026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 30130905 - 30130792
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | |  |||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||||    
T  30130905 tgttcaatcttaattaatttacactataaaact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttat 30130810  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  30130809 attcataaaatttcttcc 30130792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 42612204 - 42612091
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  42612204 tgttcaatcttaattaatttacactataagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 42612109  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  42612108 attcataaaatttcttcc 42612091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 11076967 - 11077072
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| |||||| ||||||| |||    
T  11076967 ttaattatattaaggtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttatttcatttgaatgtcctt 11077062  T
Q  339 aaatttatca 348  Q
    ||||| ||||    
T  11077063 aaattcatca 11077072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 12499464 - 12499577
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||  |||| |||||||| |||| |||     
T  12499464 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttatttcatctcgatgtccttaaattcatcatttac 12499559  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  12499560 attcataaaatttcttcc 12499577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 19503960 - 19503901
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacac 277  Q
    |||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  19503960 gatctataatgtaatattgccttaattatattaaggtgttcaatcttaattaatttacac 19503901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 15420473 - 15420545
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataa 361  Q
    |||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| ||||||||    
T  15420473 cttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataa 15420545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 39588513 - 39588617
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaa-tttcacatcaaatttctttcatctgaatgttcttaaatttatcagtta 352  Q
    |||||||||||||||||||||||  ||| ||||    || ||||| ||||| ||| ||||||||||||||||||||| |||| |||||||| |||| |||    
T  39588513 tgttcaatcttaattaatttacattacaagact----tataacaaataaaaattttacatcaaatttctttcatctggatgtccttaaattcatcattta 39588608  T
Q  353 tattcataa 361  Q
     ||||||||    
T  39588609 cattcataa 39588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 824797 - 824707
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatca 348  Q
    |||||| ||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| ||||    
T  824797 tgttcactcttaattaatttacactagaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 824707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 13305413 - 13305300
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||| ||||| ||||||||||||  |||    || ||||| | |||||| |||||||||||||||||| || |||| |||||||| |||| |||     
T  13305413 tgttcaatcataattgatttacaccacaacact----tataacaaattaaattttacatcaaatttctttcatttggatgtccttaaattcatcacttac 13305318  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  13305317 attcataaaatttcttcc 13305300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 11984694 - 11984808
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| | ||||||||| |||||||| |||||  ||| ||||    || ||||| |||||||| ||||||||||||||||||||  || | |||||||    
T  11984694 ttatattaagatgttcaattttaattaaattacattacaagact----tataacaaataaaattttacatcaaatttctttcatcttgatctccttaaat 11984789  T
Q  343 ttatcagttatattcataa 361  Q
    | |||| ||| ||||||||    
T  11984790 tcatcatttacattcataa 11984808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 745328 - 745278
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  745328 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 745278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 824568 - 824518
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  824568 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 824518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 12499693 - 12499743
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  12499693 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 12499743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 15420676 - 15420726
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || |||| || ||||||||| ||||||||||    
T  15420676 tgttcaattttgtcgttccaaattgccacagttttcaattgtcgtgagaat 15420726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 27019853 - 27019803
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || |||| || ||||||||| ||||||||||    
T  27019853 tgttcaattttgtcgttccaaattgccacaattttcaattatcgtgagaat 27019803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 30130676 - 30130626
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  30130676 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 30130626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 37270721 - 37270771
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  37270721 tgttcaattttgtcgttccaaactgccgcagtttccaattatagtgagaat 37270771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 39588743 - 39588793
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  39588743 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 39588793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 42611985 - 42611931
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    ||||||||||||||||||| || | ||| | ||||||||| ||||||||||||||    
T  42611985 tgttcaattttgtcgttccaaatttccgtaattttcaattatcgtgagaatcgtc 42611931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 724583 - 724825
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||  |||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  724583 ccataatgtaatattgttttaattatatctaggtgttcaatcttaattaatttacactacatgactcgcttagaacaattaaaatttcacatcaaatttc 724682  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  724683 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 724782  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  724783 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 724825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 20120957 - 20120715
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  20120957 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 20120858  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |    
T  20120857 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttta 20120758  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  20120757 attttcgtgagaatcgtcatgatttcaaatattgtgagaattg 20120715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 222 - 464
Target Start/End: Original strand, 40014738 - 40014980
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  40014738 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct 40014837  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||   ||||||||||||||||||||||||||||||||||||||    
T  40014838 ttcatctgaatgtccttaaatttatcagttatattcataaaatttatttctctcattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 40014937  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40014938 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 40014980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 41337236 - 41336992
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  41337236 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 41337137  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||  |||||| |||||||||||    
T  41337136 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgtttacaactgtcgcatttttca 41337037  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  41337036 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 41336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 41857703 - 41857945
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  41857703 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaagactgacttagaacaattaaaatttcacatcaaatttc 41857802  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||   ||||||||||||||||||||||||||||||||||| |    
T  41857803 tttcatctgaatgtccttaaatttatcagttatattcataaaatgtattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttta 41857902  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  41857903 attttcgtgagaatcgtcatgatttcaaatattgtgagaattg 41857945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 48951332 - 48951574
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  48951332 ccataatgtaatattgccttaattatatttaggtgttcagtcttaattaatttacactacatgactgccttagaacaattaaaatttcacatcaaatttc 48951431  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |    
T  48951432 tttcatctgaatgtcattaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttaa 48951531  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  48951532 attttcgtgagaatcgtcatgatttcgaatatcgtgagaattg 48951574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 48684194 - 48683950
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||    
T  48684194 ccataatgtaatattgccttaattatacttaggtgttcaatcttaattaatttacacaacaagactgtcttagaacaattaaaatttcacatcaaatttc 48684095  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||||   |||| ||||||||||||||||||||||||||||||||    
T  48684094 tttcatccgaatgtccttaaatttatcagttatattcataaaatttcttcctcccattttgattgtttaattttgtcgttcccaactgccgcatttttca 48683995  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48683994 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 48683950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 46554546 - 46554789
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaa-tttcacatcaaattt 319  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| | | |||| |||||||||| |||||| |||||||||||||||    
T  46554546 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactataggactggcttagaacatttaaaaatttcacatcaaattt 46554645  T
Q  320 ctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttc 419  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||   ||||||||||||||||||||||||||||||||||||    
T  46554646 ctttcatctgaatgtccttaaatttatcagttatattcataaaatttattcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttc 46554745  T
Q  420 aattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46554746 aattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 46554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 21816334 - 21816092
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  21816334 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 21816235  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||   |||||   ||||||||||||||||||| |||||||||||||||||    
T  21816234 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctatgattttgattgttcaattttgtcgttcctaactgccgcatttttca 21816135  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  21816134 attttcgtgaaaatcgtcatgatttcaaatatcgtgagaattg 21816092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 28588664 - 28588906
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  28588664 ccataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 28588763  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||    
T  28588764 tttcatctgaatttccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttctcaactgccgcatttttca 28588863  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  28588864 attttcgtgagaatcgtcatgatttcaaatattgtaagaattg 28588906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 33245689 - 33245931
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||  |||  ||||||| |||||||||||| |||||||||||    
T  33245689 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacagaactgacttagaataattaaaatttcccatcaaatttc 33245788  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||||||||||    
T  33245789 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctaccattttgattgttcaattttgtcgttcccaactgccgcatttttca 33245888  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33245889 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 33245931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 218 - 463
Target Start/End: Original strand, 44458350 - 44458595
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  44458350 gatccataatgtaatattgccttaattatatttaggttttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaat 44458449  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    |||||||| |||||||   |||||||||  |||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  44458450 ttctttcaactgaatgaaattaaatttaaaagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttt 44458549  T
Q  418 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44458550 tcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 44458595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 222 - 463
Target Start/End: Complemental strand, 44883675 - 44883434
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||    
T  44883675 cataatgtaatattggcttaattatatttaggtgttcaatcttaattaatttacactatatgactgacttagaacaattaaaatttcacatcaaatttct 44883576  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    |||||||||||||  |||||||||  |||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  44883575 ttcatctgaatgtatttaaatttactagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccgcatttttcaa 44883476  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44883475 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 44883434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 3415205 - 3415445
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||  ||||||||||||||||||||||||||||    
T  3415205 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaagactggct--gaacaattaaaatttcacatcaaatttc 3415302  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||    
T  3415303 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgttgttcccaactgccgcatttttca 3415402  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||| ||||||| |||||||||||||||||| |||||    
T  3415403 attttcgtgataatcgtcgtgatttcaaatatcgtgaaaattg 3415445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 47908057 - 47908298
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | |  ||| ||||||||| ||||||||||||||||||||||     
T  47908057 ccataatgtaatattgccttaattatatttaagtgttcaatcttaattaaattacacta-agaactggcttagaacgattaaaatttcacatcaaatttt 47908155  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |    |||| ||||||||   ||||||||||||||||||||||||||| |||||||||    
T  47908156 tttcatctgaatgtccttaaatttatcagttatattcataaaaaaatttccccccattttgattgttcaattttgtcgttcccaactgccacatttttca 47908255  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  47908256 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 47908298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 228 - 438
Target Start/End: Original strand, 5373599 - 5373809
Alignment:
Q  228 gtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatc 327  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||     
T  5373599 gtaatattgccttaattatatttaggtgttcaattttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaatttctttcatg 5373698  T
Q  328 tgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcg 427  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||||||||||||| ||||||||    
T  5373699 tgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcattttttaattttcg 5373798  T
Q  428 tgagaatcgtc 438  Q
    |||||||||||    
T  5373799 tgagaatcgtc 5373809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 9662646 - 9662863
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| | | |||| ||||||||||||||||||||||||| |  |||     
T  9662646 ccataatgtaattttgccttaattatatttaggtgttcaatcttaattaatttacactataagactggcttagaacaattaaaatttcacataatttttt 9662745  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  9662746 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 9662845  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  9662846 attttcgtgagaatcgtc 9662863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 48606672 - 48606889
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||  ||| ||||  ||||||||||||||||||| ||||||||||||    
T  48606672 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacattacaggactgacttagaacaattaaaatttgacatcaaatttc 48606771  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||| |||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||||||||||||||||||||||||||| |    
T  48606772 ttttatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttaa 48606871  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  48606872 attttcgtgagaatcgtc 48606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 218 - 438
Target Start/End: Original strand, 46935333 - 46935553
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||| ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  46935333 gatccctaatgtaatcttgtcttaattatatttaggtgttcaatcttaattaatttacactacatgactgtcttagaacaattaaaatttcacatcaaat 46935432  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||||||||||| |||||||||||| |||| |||||||| |||| ||| ||| |||||   ||||||||||||||||||| |||||||||| |||    
T  46935433 ttctttcatctgaatgtccttaaatttatctgttacattcataaaatttcttcttcctattttgattgttcaattttgtcgttccaaactgccgcaattt 46935532  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    |||||||||||||||||||||    
T  46935533 tcaattttcgtgagaatcgtc 46935553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 17967364 - 17967578
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  ||||||||| |||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  17967364 taatgtaatcttgacttaattatatttaggtgttcaatcctaattaatttacactacatgacaggcttagaacaattaaaatttcacatcaaatttcttt 17967463  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||    ||||||||||| ||||||| |||||| |||||||| ||||    
T  17967464 catctgaatgtgcttaaatttatcagttacattcataaaatttattcttcccatttcgattgttcaattttttcgttccaaactgctgcattttttaatt 17967563  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  17967564 ttcgtgagaatcgtc 17967578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 224 - 438
Target Start/End: Complemental strand, 47504560 - 47504346
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| || |||||||||||   |||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  47504560 taatgtaatcttgactcaattatatttaggcgttcaatcctaattaatttacactacctgactggcttagaacaattaaaatttcacatcaaatttcttt 47504461  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| |||||||||||| |||| |||||||| |||| ||| |||||||||   ||||||||||||||||||| ||||||||||||||| ||||    
T  47504460 catctgaatgtccttaaatttatcggttacattcataaaatttcttcttcccattttgattgttcaattttgtcgttccaaactgccgcatttttaaatt 47504361  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  47504360 ttcgtgagaatcgtc 47504346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 224 - 434
Target Start/End: Original strand, 8392521 - 8392731
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| |||||||||||||| |||  |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||| ||| |||    
T  8392521 taatgtaatcttgccttaattataattaggtgttcaatcttaattaatttacactacatgattggcttagaacaattaaaatttcacatcaactttattt 8392620  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| |||||||||||| |||| ||||||||  ||| ||| |||||||| |  ||||||||||||||||||| ||||||||||  ||||||||    
T  8392621 catctgaatgtccttaaatttatcggttacattcataaactttcttcttcccatttctattgttcaattttgtcgttccaaactgccgcaactttcaatt 8392720  T
Q  424 ttcgtgagaat 434  Q
    ||| |||||||    
T  8392721 ttcatgagaat 8392731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 16274322 - 16274468
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  16274322 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaatttc 16274421  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagattta 367  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||    
T  16274422 tttcatctgaatgtccttaaatttatcagttatattcataaaattta 16274468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 221 - 380
Target Start/End: Original strand, 41289207 - 41289366
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  41289207 ccataatgtaattttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttc 41289306  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccatttt 380  Q
    |||||||||||||| ||||| ||||||||||| |||||||| |||| ||  |||||||||    
T  41289307 tttcatctgaatgtccttaagtttatcagttacattcataaaatttcttattcccatttt 41289366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 380
Target Start/End: Original strand, 44521148 - 44521304
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  44521148 taatgtaatcttgacttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagagcaattaaaatttcacatcaaatttcttt 44521247  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccatttt 380  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||    
T  44521248 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccatttt 44521304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 288 - 435
Target Start/End: Original strand, 30759203 - 30759350
Alignment:
Q  288 gcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgtt 387  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||    
T  30759203 gcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgtt 30759302  T
Q  388 caattttgtcgttcccaactgccgcatttttcaattttcgtgagaatc 435  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  30759303 caattttgtcgttccaaactgccgcattttttaattttcgtgagaatc 30759350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 224 - 412
Target Start/End: Complemental strand, 21736421 - 21736233
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||| || |||||| |  ||||||||||||||||||||||||||||||||| |    
T  21736421 taatgtaattttgccttaattatatttaggtgttcaatcttaattaatttagactacatgaatgacttagaacaattaaaatttcacatcaaatttctgt 21736322  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgc 412  Q
    ||||| ||||| ||||| ||||||| ||| |||||||| |||| ||  |||||||||   |||||| |||||||||||| |||||||||    
T  21736321 catctaaatgtccttaagtttatcatttacattcataaaatttcttattcccattttgattgttcacttttgtcgttccaaactgccgc 21736233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 339 - 464
Target Start/End: Original strand, 18994134 - 18994259
Alignment:
Q  339 aaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    |||||||||||||||||||| || | |||||| |||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18994134 aaatttatcagttatattcaaaaaaattattcttcccatgttgattgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 18994233  T
Q  439 atgatttcaaatatcgtgagaattgt 464  Q
    ||||||||||||||||||||||||||    
T  18994234 atgatttcaaatatcgtgagaattgt 18994259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 23593618 - 23593830
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaat----taaaatttcacatcaaattt 319  Q
    ||||||||| ||| |||| |||||||||  ||||||||  ||||||||||||||||||||||| ||||| ||||||    ||||||||||||||||||||    
T  23593618 taatgtaatcttgacttagttatatttaggtgttcaatgctaattaatttacaccacatgactggcttaaaacaattatataaaatttcacatcaaattt 23593717  T
Q  320 ctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttc 419  Q
    ||||||||||||||| ||||||||      ||| |||||||| |||| ||| || ||||||   |||||||||||||||||||  ||| ||||||||||     
T  23593718 ctttcatctgaatgtccttaaatt------ttacattcataaaatttcttcttctcattttgattgttcaattttgtcgttccatactaccgcatttttt 23593811  T
Q  420 aattttcgtgagaatcgtc 438  Q
    |||||||||||||||||||    
T  23593812 aattttcgtgagaatcgtc 23593830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 384 - 464
Target Start/End: Original strand, 16276783 - 16276863
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 464  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16276783 tgttcaattttatcgttcccaactgccgcatttttcaatattcgtgagaatcgtcatgatttcaaatatcgtgagaattgt 16276863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 4658151 - 4658242
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacat 312  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  4658151 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacat 4658242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 9663515 - 9663402
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  9663515 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 9663420  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  9663419 attcataaaatttcttcc 9663402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 18994881 - 18994768
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||||||||| || |||| |||     
T  18994881 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgttcttaacttcatcatttac 18994786  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||||||||    
T  18994785 attcataaaatttattcc 18994768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 41336370 - 41336478
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||| |||     
T  41336370 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaatttatcatttac 41336465  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  41336466 attcataaaattt 41336478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 40015598 - 40015488
Alignment:
Q  257 tcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatatt 356  Q
    ||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||| ||| |||    
T  40015598 tcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaatttatcatttacatt 40015503  T
Q  357 cataagatttattcc 371  Q
    ||||| |||| ||||    
T  40015502 cataaaatttcttcc 40015488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 16277484 - 16277371
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  16277484 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 16277389  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  16277388 attcataaaatttcttcc 16277371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 20120094 - 20120207
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  20120094 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 20120189  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  20120190 attcataaaatttcttcc 20120207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 33246553 - 33246440
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||||    
T  33246553 tgttcaatcttaattaatttacactacaaaact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttat 33246458  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  33246457 attcataaaatttcttcc 33246440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 351
Target Start/End: Complemental strand, 41289518 - 41289425
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagtt 351  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| |||| ||||||||||||||||||||| |||||||| |||||||    
T  41289518 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacataaaatttctttcatctgaatgtccttaaattcatcagtt 41289425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 41858463 - 41858350
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  41858463 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgtatgtccttaaattcatcatttac 41858368  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  41858367 attcataaaatttcttcc 41858350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 44459217 - 44459104
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  44459217 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 44459122  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  44459121 attcataaaatttcttcc 44459104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 48607545 - 48607432
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||  | |||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  48607545 tgttcaatcttaattaatttacaccacaagact----tataacacatcaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttac 48607450  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||||||||    
T  48607449 attcataaaatttattcc 48607432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 46000779 - 46000887
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||| ||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  46000779 tgttcaatcttaattaatttacaccacaagact----tataacaaataaagttttacatcaaatttctttcatctggatgtccttaaattcatcacttac 46000874  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  46000875 attcataaaattt 46000887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 48683318 - 48683442
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| || |||||||||||||||||||||||| ||| |||| |     ||||| |||||||| ||||||||||||||||||||| |||| |||||||    
T  48683318 ttatattaaagtgttcaatcttaattaatttacactacaagacttgt----aacaaataaaattttacatcaaatttctttcatctggatgtccttaaat 48683413  T
Q  343 ttatcagttatattcataagatttattcc 371  Q
    | |||| ||| |||||||| |||| ||||    
T  48683414 tcatcatttacattcataaaatttcttcc 48683442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 28589511 - 28589398
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||| || |||| |||||||| |||| |||     
T  28589511 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcatttac 28589416  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  28589415 attcataaaatttcttcc 28589398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 47909301 - 47909188
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||| ||||||||||||||||| |||| |||||||| |||| |||     
T  47909301 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacaacaaatttctttcatctggatgtccttaaattcatcatttac 47909206  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  47909205 attcataaaatttcttcc 47909188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 48952092 - 48951979
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| | ||||||||||||||||||| |||| |||||||| |||| |||     
T  48952092 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttaaatcaaatttctttcatctgtatgtccttaaattcatcatttac 48951997  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  48951996 attcataaaatttcttcc 48951979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 17968246 - 17968119
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  17968246 ttaattatattaaggtgttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaaattt-tttcatctggatgtcctt 17968152  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||| ||||    
T  17968151 aaattcatcacttacattcataaaatttcttcc 17968119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 366
Target Start/End: Original strand, 44882811 - 44882930
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| | ||||| ||||||||||||||||||| ||| | ||    || ||||| |||||||| |||||||||||||||||||| ||||| |||||||    
T  44882811 ttatattaagatgttgaatcttaattaatttacactacaagtct----tataacaaataaaattttacatcaaatttctttcatctaaatgtccttaaat 44882906  T
Q  343 ttatcagttatattcataagattt 366  Q
    | |||| ||| |||||||| ||||    
T  44882907 tcatcatttacattcataaaattt 44882930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 4925682 - 4925633
Alignment:
Q  416 tttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4925682 tttcaattttcatgagaatcgtcatgatttcaaatatcgtgagaattgtc 4925633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 725447 - 725334
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||  |||| |||||||| |||| |||     
T  725447 tgttcaatcttaattaatttacactacaagact----tataataaataaaattttacatcaaatttctttcatctcgatgtccttaaattcatcatttac 725352  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  725351 attcataaaatttcttcc 725334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 3416069 - 3415956
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  3416069 tgttcaatcttaattaatttacactacaagact----tataaaaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 3415974  T
Q  354 attcataagatttattcc 371  Q
     ||||||| |||| ||||    
T  3415973 tttcataaaatttcttcc 3415956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 21815470 - 21815583
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || || || |||||||| ||||||||||||||||||||| ||||  ||||||| |||| |||     
T  21815470 tgttcaatcttaattaatttacactacaagact----tataaaaaataaaattttacatcaaatttctttcatctggatgtctttaaattcatcatttac 21815565  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  21815566 attcataaaatttcttcc 21815583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 46555409 - 46555296
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||  ||| ||||    ||  |||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  46555409 tgttcaatcttaattaatttacattacaagact----tatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 46555314  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  46555313 attcataaaatttcttcc 46555296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 46936214 - 46936085
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaa-tttctttcatctgaatgttct 337  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| |||||||| ||| ||| ||||| |||||||    
T  46936214 ttaattatattaaggtgttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaaatttttttttatctggatgttct 46936119  T
Q  338 taaatttatcagttatattcataagatttattcc 371  Q
    |||||| |||| ||||||| |||| |||| ||||    
T  46936118 taaattcatcacttatatttataaaatttcttcc 46936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 4925009 - 4925117
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||||||||| || ||| ||||    || ||||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| |||     
T  4925009 tgttcaatcttaattaatttagactacaagact----tataacaaataaaattttacatcaaatttctttcatctagatgtccttaaattcatcatttac 4925104  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  4925105 attcataaaattt 4925117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 30758307 - 30758376
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactc 287  Q
    ||||| ||||||||| ||| ||||||||||||||  ||||||||| |||||||||||||| |||||||||    
T  30758307 gatccctaatgtaatcttgacttaattatatttaggtgttcaatcctaattaatttacactacatgactc 30758376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 30760025 - 30759894
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaa---atttctttcatctgaatgtt 335  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| |||||||    ||| |||||| |||||||     
T  30760025 ttaattatattaaggtgttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaatttttttttttcatttgaatgtc 30759930  T
Q  336 cttaaatttatcagttatattcataagatttattcc 371  Q
    |||||||| |||| ||| |||||||| |||| ||||    
T  30759929 cttaaattcatcacttacattcataaaatttcttcc 30759894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 44521300 - 44521348
Alignment:
Q  390 attttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  44521300 attttgtcgttccaaactgcagcattttttaattttcgtgagaatcgtc 44521348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 343
Target Start/End: Original strand, 47503675 - 47503775
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  | |||||||||||||||||||||| | | ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  47503675 ttaattatattaaggtattcaatcttaattaatttacactaaaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtcctt 47503770  T
Q  339 aaatt 343  Q
    |||||    
T  47503771 aaatt 47503775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 23594499 - 23594370
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaa-atttctttcatctgaatgttct 337  Q
    ||||||||||| |  ||||||||||||| |||||||||| ||| ||    |||| ||||| |||||||| |||||||  ||| |||||| || |||| ||    
T  23594499 ttaattatattaaggtgttcaatcttaagtaatttacactacaaga----cttataacaaataaaattttacatcaatttttttttcatgtggatgtcct 23594404  T
Q  338 taaatttatcagttatattcataagatttattcc 371  Q
    |||||| |||| ||| |||||||| |||| ||||    
T  23594403 taaattcatcacttacattcataaaatttcttcc 23594370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 8393160 - 8393110
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  8393160 tgttcaattttgtcgttccaaactgccgcagtttccaattatagtgagaat 8393110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 10934645 - 10934607
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacac 277  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  10934645 ttaattatatttatatgttcaattttaattaatttacac 10934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 44458988 - 44458938
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  44458988 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 44458938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 44883041 - 44883091
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| |||| |||||    
T  44883041 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtcagaat 44883091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 16919086 - 16918844
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  16919086 ccataatgtaatattgtcttaattatatttatgtgttcaatcttaattaatttacactacaggactagcttagaacaattaaaatttcacatcaaatttc 16918987  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||||||||||    
T  16918986 tttcatctgaatgttcttaaatttatcagttatattcataaaatttattccttccattttgattgttcaattttgtcgttcccaactgccgcatttttca 16918887  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16918886 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 16918844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 27783390 - 27783148
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  27783390 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttc 27783291  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||    
T  27783290 tttcaactgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgttccaaactgccgcatttttca 27783191  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27783190 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 27783148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 11836742 - 11836986
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||||    
T  11836742 ccataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacattacaggactagcttagaacaattaaaatttcacatcaaatttc 11836841  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||   ||||||||||||||||||| || ||||||||||||||    
T  11836842 tttcatctgaatgttcttaaatttatcagttatattcataaaagttattcctcccattttgattgttcaattttgtcgttccaaattgccgcatttttca 11836941  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  11836942 attttcgtgagaattgtcatgatttcaaatatcgtgagaattgtc 11836986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 4588991 - 4589233
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| || | |||||||||||| ||||||||||||||||||||    
T  4588991 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaagattggcttagaacaataaaaatttcacatcaaatttc 4589090  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||| |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||    
T  4589091 tttaatctgaatgttcttaaatttatcaattatatttataaaatttattcctcccattttgattgttcaattttgtcgttcccaactgccacatttttca 4589190  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4589191 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 4589233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Complemental strand, 14104905 - 14104663
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  14104905 ccataatgtaatattgtcttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaatttcacatcaaatttc 14104806  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||   |||||||||||| |||||||||||||| |||||||||    
T  14104805 tttcatctgaatgtccttaaatttatcagttatattcataaaacttattcctcccattttgattgttcaattttgccgttcccaactgccacatttttca 14104706  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  14104705 attttcgtgagaatcgtcatgattttaaatatcgtgagaattg 14104663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 222 - 463
Target Start/End: Complemental strand, 23573987 - 23573746
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  23573987 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttagaacaattaaaatttcacatcaaatttct 23573888  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||| |||| |||| ||||||||||    
T  23573887 ttcatctgaaagtacttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtcgtttccaattgccacatttttcaa 23573788  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    ||||||  ||||||||||||||||||||||||||||||||||    
T  23573787 ttttcgctagaatcgtcatgatttcaaatatcgtgagaattg 23573746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 27440827 - 27440579
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgctta----gaacaattaaaatttcacatcaaa 316  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||| ||||| |||||||| |||||    ||||||||||||||||||||||||    
T  27440827 ccataatataatattgccttaattatatttaggtgttcaatcttaattaatctacactacatgactggcttaattagaacaattaaaatttcacatcaaa 27440728  T
Q  317 tttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcattt 416  Q
     ||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||| ||||    
T  27440727 attctttcatctgaatgcccttaaatttatcagttatattcataaaatttattccttccattttgattgttcaattttgtcgttcccaactgccgtattt 27440628  T
Q  417 ttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27440627 ttcaatttttgtgagaatcgtcatgatttcaaatatcgtgagaaatgtc 27440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 221 - 440
Target Start/End: Original strand, 954728 - 954947
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||     
T  954728 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaattta 954827  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    ||| |||||||||| |||||||||||||||||||||||||| |||| ||| || ||||||   | |||||||||||||||| ||| ||||||||||||||    
T  954828 ttttatctgaatgtccttaaatttatcagttatattcataaaatttcttcttctcattttgattattcaattttgtcgttctcaattgccgcatttttca 954927  T
Q  421 attttcgtgagaatcgtcat 440  Q
    ||||| ||||||||||||||    
T  954928 atttttgtgagaatcgtcat 954947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 221 - 438
Target Start/End: Complemental strand, 28579517 - 28579299
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  28579517 ccataatttaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttc 28579418  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaa-ttttgtcgttcccaactgccgcatttttc 419  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   | ||||| |||| ||||||||||||||||||||||||    
T  28579417 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgatttttcaatttttttcgttcccaactgccgcatttttc 28579318  T
Q  420 aattttcgtgagaatcgtc 438  Q
    |||||||||||||||||||    
T  28579317 aattttcgtgagaatcgtc 28579299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 218 - 438
Target Start/End: Original strand, 15288203 - 15288423
Alignment:
Q  218 gatccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaat 317  Q
    ||||||||||| ||| |||| |||||||||||||  |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||    
T  15288203 gatccataatgcaatcttgcattaattatatttaggtgttcaatcttaattaatatacactacatgactggcttagaacaattaaaatttcacataaaat 15288302  T
Q  318 ttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttt 417  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||| ||| |||||||||   |||||||||||||| |||| ||||||||||||||    
T  15288303 ttctttcatttgaatgttcttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattttgtcattccaaactgccgcatttt 15288402  T
Q  418 tcaattttcgtgagaatcgtc 438  Q
    ||||||||| |||||||||||    
T  15288403 tcaattttcatgagaatcgtc 15288423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 241 - 435
Target Start/End: Original strand, 11153794 - 11153988
Alignment:
Q  241 aattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaa 340  Q
    |||||||||||  |||||||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11153794 aattatatttaggtgttcaattttaattaatttacactacatgactgtcttagaacaattaaaatttcacatcaaatttctttcatctgaatgtccttaa 11153893  T
Q  341 atttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatc 435  Q
    ||||||||||||||||||||| |||| ||| | |||||||   |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  11153894 atttatcagttatattcataaaatttcttcttaccattttgattgtttaattttgtcgttcccaactgccgcacttttcaattttcgtgagaatc 11153988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 224 - 430
Target Start/End: Original strand, 1090484 - 1090690
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||    
T  1090484 taatgtaattttgccttaattatatttaggtgttcaatcttaattaatttacactacaagactggcttagaacaattaaaaattcacattaaatttcttt 1090583  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||| ||||||| ||||||||||||||||| |||||||  |||| ||| |||||||||   ||||||||||| ||||||| |||||||| |||||||||||    
T  1090584 catttgaatgtccttaaatttatcagttacattcatacaatttcttcttcccattttgattgttcaattttatcgttccaaactgccgtatttttcaatt 1090683  T
Q  424 ttcgtga 430  Q
    |||||||    
T  1090684 ttcgtga 1090690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 221 - 366
Target Start/End: Original strand, 5687408 - 5687557
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgct----tagaacaattaaaatttcacatcaaa 316  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| ||||  ||    ||||||||||||||||||||||||||    
T  5687408 ccataatgtaatattgccttaattatatttaggtgctcaatcttaattaatttacaccacaggactaactaacttagaacaattaaaatttcacatcaaa 5687507  T
Q  317 tttctttcatctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  5687508 tttctttcatctgaatgtccttaaatttatcagttatattcataaaattt 5687557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 432
Target Start/End: Complemental strand, 24084003 - 24083826
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| |||     
T  24084003 tgttcaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttgtttcatttgaatgtccttaaatttatcaattac 24083904  T
Q  354 attcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgaga 432  Q
    |||||||| |||| ||| |||||||||   ||||||| ||| ||||||| |||||| ||||||||||||||| ||||||    
T  24083903 attcataaaatttcttcttcccattttggttgttcaa-tttatcgttccaaactgcagcatttttcaattttggtgaga 24083826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 21860488 - 21860699
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||| | |  ||||||||||||||||||||||||||||||| |      
T  21860488 taatgtaatcttgtcttaattatatttaggtgttcaatcttaattaatttacactacattattgtcttagaacaattaaaatttcacatcaaatttat-- 21860585  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     || ||||||| ||||| ||||| | ||| |||||||| |||| ||  | |||||||   ||||||||||||||||||| ||||| | ||||||||||||    
T  21860586 -atttgaatgtccttaagtttataatttacattcataaaatttcttgtttccattttgattgttcaattttgtcgttccaaactgtcacatttttcaatt 21860684  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  21860685 ttcgtgagaatcgtc 21860699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 313 - 438
Target Start/End: Complemental strand, 25119100 - 25118975
Alignment:
Q  313 caaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgc 412  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   ||||||||||| ||||||||||||| |||    
T  25119100 caaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttttcgttcccaactgtcgc 25119001  T
Q  413 atttttcaattttcgtgagaatcgtc 438  Q
    ||||||||||||||||||||||||||    
T  25119000 atttttcaattttcgtgagaatcgtc 25118975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 25119620 - 25119520
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  25119620 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttc 25119521  T
Q  321 t 321  Q
    |    
T  25119520 t 25119520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 24083168 - 24083291
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||||||||||| |||    
T  24083168 ttaattatattaaggtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgaatgtcctt 24083263  T
Q  339 aaatttatcagttatattcataagattt 366  Q
    ||||| |||| ||| |||||||| ||||    
T  24083264 aaattcatcacttacattcataaaattt 24083291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 955601 - 955493
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||||    
T  955601 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttat 955506  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  955505 attcataaaattt 955493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 27782528 - 27782641
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| |||  |||    || ||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||| |||     
T  27782528 tgttcaatcttaattaatttacactacaaaact----tataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcatcatttac 27782623  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27782624 attcataaaatttcttcc 27782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 366
Target Start/End: Complemental strand, 11154635 - 11154527
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  11154635 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 11154540  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  11154539 attcataaaattt 11154527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 14104051 - 14104159
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||| |||     
T  14104051 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgttcttaaattcatcatttac 14104146  T
Q  354 attcataagattt 366  Q
     ||||||| ||||    
T  14104147 tttcataaaattt 14104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 4589837 - 4589724
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||| |||| |||| |||||||| |||| |||     
T  4589837 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcttctggatgtccttaaattcatcatttac 4589742  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  4589741 attcataaaatttcttcc 4589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 16918456 - 16918569
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||| ||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  16918456 tgttcaattttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 16918551  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  16918552 attcataaaatttcttcc 16918569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 17550843 - 17550730
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    ||  |||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  17550843 tgttcaatcttaattaatttacactacaagact----tatgacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 17550748  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  17550747 attcataaaatttcttcc 17550730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 21861275 - 21861168
Alignment:
Q  260 atcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcat 359  Q
    |||||||||||||||||| ||| ||||    || ||||| |||||||  ||||||||||||||||||||| |||| |||||||| |||| ||| ||||||    
T  21861275 atcttaattaatttacacaacaagact----tataacaaataaaattatacatcaaatttctttcatctggatgtccttaaattcatcacttacattcat 21861180  T
Q  360 aagatttattcc 371  Q
    || |||||||||    
T  21861179 aaaatttattcc 21861168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 25109601 - 25109691
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatca 348  Q
    ||||||||||||||||||||| |||||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| ||||    
T  25109601 tgttcaatcttaattaatttaaaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 25109691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 11837603 - 11837490
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||  ||||  ||||||| |||| |||     
T  11837603 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctagatgtcattaaattcatcatttac 11837508  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  11837507 attcataaaatttcttcc 11837490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 28578668 - 28578781
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||  ||| ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||||||| |||| |||     
T  28578668 tgttcaatcttaattaatttacaatacaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtccttaaattcatcacttac 28578763  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  28578764 attcataacatttcttcc 28578781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 27438458 - 27438571
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||||| |||||| ||| ||||    || ||||| |||||||| |||||||||||||||| | || |||| |||||||| |||| |||     
T  27438458 tgttcaatcttaattaacttacactacaagact----tataacaaataaaattttacatcaaatttctttcgtttggatgtccttaaattcatcatttac 27438553  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  27438554 attcataaaatttcttcc 27438571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 27782757 - 27782807
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||||||||| ||||||||||    
T  27782757 tgttcaattttgtcgttccaaattgccgcaattttcaattatcgtgagaat 27782807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 23580374 - 23580427
Alignment:
Q  295 acaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatca 348  Q
    |||| |||||||| ||||||||||||||||||||| |||| |||||||| ||||    
T  23580374 acaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatca 23580427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 11154418 - 11154368
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  11154418 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 11154368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 23580566 - 23580616
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  23580566 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 23580616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 27438686 - 27438736
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  27438686 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 27438736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 11837375 - 11837327
Alignment:
Q  386 ttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  11837375 ttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 11837327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 440
Target Start/End: Original strand, 14104280 - 14104336
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtcat 440  Q
    ||||||||||| ||||||| || ||||||| ||| ||||| |||||||||| |||||    
T  14104280 tgttcaattttatcgttccaaattgccgcaatttccaattatcgtgagaattgtcat 14104336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 38281362 - 38281606
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||| |||| | ||| |||||||||||||||||||||||||||    
T  38281362 ccataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttgcactacaggactggtttaaaacaattaaaatttcacatcaaatttc 38281461  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  38281462 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttaattgttcaattttgtcgttcccaactgccgcatttttca 38281561  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  38281562 attttcgtgagaattgtcatgatttcaaatatcgtgagaattgtc 38281606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 222 - 465
Target Start/End: Original strand, 37724607 - 37724850
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| || |  |||||||||||||||||||||||||||||||||    
T  37724607 cataatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggattgccttagaacaattaaaatttcacatcaaatttct 37724706  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||    
T  37724707 ttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttaattgttgaattttgtcgttcccaactgccgcatttttcaa 37724806  T
Q  422 ttttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    | |||||||||||||||||||||||||||||| |||||||||||    
T  37724807 tattcgtgagaatcgtcatgatttcaaatatcatgagaattgtc 37724850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 3906005 - 3906247
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||| ||||  ||||||| ||||||||||||||||||||||||    
T  3906005 ccataatgtaatattgccttaattatatttaggtgttcaattttaattaatttacactacaggactgacttagaataattaaaatttcacatcaaatttc 3906104  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||||||||||    
T  3906105 tttcatctgattgtccttaaatttatcagttatattcataaaatttattcctaccattttgattgttcaattttgtcgttcccaactgccgcatttttca 3906204  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3906205 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 3906247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 39966260 - 39966502
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||| ||||||||||||||||||||||||||  | |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||     
T  39966260 ccatgatgtaatattgccttaattatatttaggtattcaatcttaattaatttacactacaggactcgcttagaacaattaaaattacacatcaaattta 39966359  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||||||||||||    
T  39966360 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgatcgttcaattttgtcgttcccaattgccgcatttttca 39966459  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  39966460 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 39966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 221 - 463
Target Start/End: Original strand, 76733 - 76973
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| |||| ||  |||||||||||||||||||||||||||||    
T  76733 ccatgatgtaatattgccttaattatatttaggtgttcaatcttaattaatttacactacaggactggc--agaacaattaaaatttcacatcaaatttc 76830  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||  |||||| ||||| |||||||||    
T  76831 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcccattttgattgttcaattttgtttttcccagctgccacatttttca 76930  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 463  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76931 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattg 76973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 221 - 438
Target Start/End: Complemental strand, 15153503 - 15153286
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  15153503 ccataatgtattattgccttaattatatttaagtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttc 15153404  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||  |||| ||| |||||||||   |||||||||||||||||||||| |||| |||||||||    
T  15153403 tttcatctgaatgtccttaaatttatcagttatattcatagaatttcttcttcccattttaattgttcaattttgtcgttcccaattgccacatttttca 15153304  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  15153303 attttcgtgagaatcgtc 15153286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 221 - 438
Target Start/End: Original strand, 28391048 - 28391265
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  28391048 ccataatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttatactacatgactggcttagaacaattaaaatttcacatcaaatttc 28391147  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||  |||||||||   ||||||||||||||||||||||||| |||||||||||    
T  28391148 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattattcccattttgattgttcaattttgtcgttcccaactgtcgcatttttca 28391247  T
Q  421 attttcgtgagaatcgtc 438  Q
    ||||||||||||||||||    
T  28391248 attttcgtgagaatcgtc 28391265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 222 - 438
Target Start/End: Complemental strand, 15399927 - 15399711
Alignment:
Q  222 cataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttct 321  Q
    ||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  15399927 cataatgtaatcttgtcttaattatatttaggtgttcaatcttaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaattttt 15399828  T
Q  322 ttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaa 421  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||| | |||||||   ||||||||||||||||||||||||| ||||||||| ||    
T  15399827 ttcatctgaatgtccttaaatttatcagttatattcataaaatttcttctttccattttgattgttcaattttgtcgttcccaactgtcgcattttttaa 15399728  T
Q  422 ttttcgtgagaatcgtc 438  Q
    |||||||||||||||||    
T  15399727 ttttcgtgagaatcgtc 15399711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 221 - 435
Target Start/End: Original strand, 2291394 - 2291608
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    |||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| ||| || |  |||| ||||||||||||||||||||||||| |    
T  2291394 ccataatgtaatcttgtcttaattatatttaggtgttcaatcttaattaatttacactacaggattgacttataacaattaaaatttcacatcaaattcc 2291493  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  2291494 tttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgattgttcaattttgtcgttcccaactgccgcatttttca 2291593  T
Q  421 attttcgtgagaatc 435  Q
    |||||||||||||||    
T  2291594 attttcgtgagaatc 2291608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 226 - 438
Target Start/End: Original strand, 1054242 - 1054454
Alignment:
Q  226 atgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttca 325  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||||||    
T  1054242 atgtaatattgcattaattatatttaggtgttcaatcttaattaatttacactaaatgactgacttagaacaattaaaatttcacatcaaatttctttca 1054341  T
Q  326 tctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatttt 425  Q
    ||||||||| ||| |||||||||||||||||||||| |||| ||| | |||||||   ||||||||| |||||||||||||||| |||||||||||||||    
T  1054342 tctgaatgtccttgaatttatcagttatattcataaaatttcttctttccattttgattgttcaattctgtcgttcccaactgctgcatttttcaatttt 1054441  T
Q  426 cgtgagaatcgtc 438  Q
    |||||||||||||    
T  1054442 cgtgagaatcgtc 1054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 27550712 - 27550926
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||| || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  27550712 taatgtaatcttgacttaattatatttaggtgttcattcctaattaatttacactacatgactggcttagaacaattaaaatttcacatcaaatttcttt 27550811  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||   ||||||||| ||||||||| |||||||| |||||| ||||    
T  27550812 catctgaatgtccttaaatttatcagttacattcataaaatttcttcttcccattttgattgttcaattatgtcgttccaaactgccgtattttttaatt 27550911  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  27550912 ttcgtgagaatcgtc 27550926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 223 - 438
Target Start/End: Original strand, 39068101 - 39068316
Alignment:
Q  223 ataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctt 322  Q
    |||||||||| ||||||||||||||||||  |||||||||||| ||||||||||  ||||||||  |||||| ||||||||||||||||| |||||||||    
T  39068101 ataatgtaatcttgccttaattatatttaggtgttcaatcttagttaatttacattacatgactgacttagagcaattaaaatttcacattaaatttctt 39068200  T
Q  323 tcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaat 422  Q
    |||| ||||||| |||||||||||||||||||||||||| |||| ||| | |||||||   ||||||||||| ||||||||||||||||||||||| |||    
T  39068201 tcatttgaatgtccttaaatttatcagttatattcataaaatttcttctttccattttgattgttcaattttttcgttcccaactgccgcattttttaat 39068300  T
Q  423 tttcgtgagaatcgtc 438  Q
    ||||||||||||||||    
T  39068301 tttcgtgagaatcgtc 39068316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 3754038 - 3754249
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||||||| ||| ||||  |||||||||||||||||||||||||||||||||      
T  3754038 taatgtaatcttgccttaattatatttagatgttcgatcttaattaatttacactacaggactgacttagaacaattaaaatttcacatcaaatttct-- 3754135  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     || ||||||| ||||| ||||| | ||| |||||||| |||| ||  |||||||||   ||||||||||||||||||| ||||||||||||||||||||    
T  3754136 -atgtgaatgtccttaagtttataatttacattcataaaatttcttgttcccattttgattgttcaattttgtcgttccaaactgccgcatttttcaatt 3754234  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  3754235 ttcgtgagaatcgtc 3754249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 3850898 - 3851109
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||      
T  3850898 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacatgactcgcttaaaacaattaaaatttcacatcaaatttct-- 3850995  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     |||||||||| ||||| ||||| | ||| |||||||| |||| ||  |||||||||   |||||||||||||||||   || |||||||||||||||||    
T  3850996 -atctgaatgtccttaagtttataatttacattcataaaatttcttgttcccattttgattgttcaattttgtcgttttaaaatgccgcatttttcaatt 3851094  T
Q  424 ttcgtgagaatcgtc 438  Q
    || ||||||||||||    
T  3851095 tttgtgagaatcgtc 3851109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 295 - 438
Target Start/End: Original strand, 4737406 - 4737549
Alignment:
Q  295 acaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaatttt 394  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||   |||||||||||    
T  4737406 acaattaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatcagttatattcataaaatttcttcttcccattttgagtgttcaatttt 4737505  T
Q  395 gtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4737506 gtcgttcccaactgccgcaattttcaattttcgtgagaatcgtc 4737549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 39774285 - 39774496
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||| ||||  |||||||||| ||||||||||||||||||||||      
T  39774285 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaggactgacttagaacaaataaaatttcacatcaaatttct-- 39774382  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     |||| ||||| ||||| ||||| | ||| |||||||| |||| ||  |||||||||   || |||||||||||||||| ||||||||||||||||||||    
T  39774383 -atcttaatgtccttaagtttataatttacattcataaaatttcttgttcccattttgattgctcaattttgtcgttccaaactgccgcatttttcaatt 39774481  T
Q  424 ttcgtgagaatcgtc 438  Q
    |||||||||||||||    
T  39774482 ttcgtgagaatcgtc 39774496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 299 - 438
Target Start/End: Complemental strand, 6645520 - 6645381
Alignment:
Q  299 ttaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcg 398  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||  ||||||| |||| ||| |||||||||   |||||||||||||||    
T  6645520 ttaaaatttcacatcaaatttctttcatctgaatgtccttaaatttatgagttacgttcataaaatttcttcttcccattttgattgttcaattttgtcg 6645421  T
Q  399 ttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6645420 ttccaaactgccgcatttttcaattttcgtgagaatcgtc 6645381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 262 - 438
Target Start/End: Original strand, 42080005 - 42080178
Alignment:
Q  262 cttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataa 361  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||   |||||||||| ||||| ||||| | ||| ||||||||    
T  42080005 cttaattaatttacactacaggactggcttagaacaattaaaatttcacatcaaatttct---atctgaatgtccttaagtttataatttacattcataa 42080101  T
Q  362 gatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaatcgtc 438  Q
     |||| ||  |||||||||   ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  42080102 aatttcttgttcccattttgattgttcaattttgtcgttccaaactgccgtatttttcaattttcgtgataatcgtc 42080178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 2292266 - 2292153
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || || || |||||||| ||||||||||||||||||||| |||| |||||||| ||||||||     
T  2292266 tgttcaatcttaattaatttacaccacaagact----tataataaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcagttac 2292171  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  2292170 attcataaaatttcttcc 2292153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 3906857 - 3906744
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||||||||||| |||||||| |||| |||     
T  3906857 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctgaatgtccttaaattcatcatttac 3906762  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  3906761 attcataaaatttcttcc 3906744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 6646013 - 6645930
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaattt 307  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  6646013 taatgtaatcttgtcttaattatatttaggtgttcaatcttaattaatttacacaacaggactggcttagaacaattaaaattt 6645930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 243 - 366
Target Start/End: Complemental strand, 14006040 - 14005921
Alignment:
Q  243 ttatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaat 342  Q
    ||||||| || |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||    
T  14006040 ttatattaaagtgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaat 14005945  T
Q  343 ttatcagttatattcataagattt 366  Q
    | |||| ||| |||||||| ||||    
T  14005944 tcatcatttacattcataaaattt 14005921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 15399051 - 15399154
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||| ||| |||| |||||||| |||| |||     
T  15399051 tgttcaatcttaattaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcaactggatgtccttaaattcatcacttac 15399146  T
Q  354 attcataa 361  Q
    ||||||||    
T  15399147 attcataa 15399154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 4738204 - 4738091
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||||||||||||| || |||| |||||||| |||| |||     
T  4738204 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatttggatgtccttaaattcatcatttac 4738109  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  4738108 attcataaaatttcttcc 4738091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 37725467 - 37725354
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| |||| |||||||||||||||| |||| |||||||| |||| |||     
T  37725467 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacattaaatttctttcatctggatgtccttaaattcatcatttac 37725372  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  37725371 attcataaaatttcttcc 37725354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 15152641 - 15152749
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||| | |||| |||||||| |||| |||     
T  15152641 tgttcaatcttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatcaggatgtccttaaattcatcatttac 15152736  T
Q  354 attcataagattt 366  Q
    |||||||| ||||    
T  15152737 attcataaaattt 15152749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 25223542 - 25223650
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||| | ||| ||    |||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| |||     
T  25223542 tgttcaatcttaattaatttactctacaaga----cttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttac 25223637  T
Q  354 attcataagattt 366  Q
    ||| |||| ||||    
T  25223638 atttataaaattt 25223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 366
Target Start/End: Complemental strand, 77559 - 77460
Alignment:
Q  263 ttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataag 362  Q
    ||||||||||||||| ||||||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| |||| |||     
T  77559 ttaattaatttacactacatgact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcgtaaa 77464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 366
Target Start/End: Original strand, 6644737 - 6644836
Alignment:
Q  263 ttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataag 362  Q
    ||||||||||||||| ||| ||||    || ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| ||||||||     
T  6644737 ttaattaatttacactacaagact----tataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcacttacattcataaa 6644832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 361
Target Start/End: Complemental strand, 28391767 - 28391664
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||| || |||||||||||||| ||||    || ||||| |||||||| ||||||||||||||||||||| || | |||||||| |||| |||     
T  28391767 tgttcaatctaaactaatttacaccacaagact----tataacaaataaaattttacatcaaatttctttcatctggatctccttaaattcatcacttac 28391672  T
Q  354 attcataa 361  Q
    ||||||||    
T  28391671 attcataa 28391664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 38282195 - 38282113
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    |||| ||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||| ||| |||||||| |||| ||||    
T  38282195 cttataacaaataaaattttacatcaaatttctttcatctggatgtccttaaattcatcatttacattcataaaatttcttcc 38282113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 366
Target Start/End: Complemental strand, 42080758 - 42080656
Alignment:
Q  260 atcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcat 359  Q
    |||||||||||||||||| ||| ||||    || ||||| |||||||| |||||||| |||||||||||| |||| |||||||| |||| ||| ||||||    
T  42080758 atcttaattaatttacactacaagact----tataacaaataaaattttacatcaaacttctttcatctggatgtccttaaattcatcacttacattcat 42080663  T
Q  360 aagattt 366  Q
    || ||||    
T  42080662 aaaattt 42080656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 27551577 - 27551449
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| ||||||||||| || |||||| || |  ||    
T  27551577 ttaattatattaaggtgttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaaattttttccatctggatctcttt 27551482  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||| ||||    
T  27551481 aaattcatcacttacattcataaaatttcttcc 27551449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 3754817 - 3754735
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    |||| ||||| |||||||| ||||||||||||||||||||  |||| |||||||| |||| ||| |||||||| |||| ||||    
T  3754817 cttataacaaataaaattttacatcaaatttctttcatctcgatgtccttaaattcatcacttacattcataaaatttcttcc 3754735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 3851660 - 3851578
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    |||| ||||| |||||||| ||||||||||| ||||||||| |||| |||||||| |||| ||| |||||||| |||| ||||    
T  3851660 cttataacaaataaaattttacatcaaatttatttcatctggatgtccttaaattcatcacttacattcataaaatttcttcc 3851578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 33853095 - 33853170
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatt 318  Q
    |||||||||||||  |||||||||||||||||||||||||| |    | ||||| | |||||||||||||||||||||||    
T  33853095 ttaattatatttaggtgttcaatcttaattaatttacaccata----tagcttatatcaattaaaatttcacatcaaatt 33853170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 39967078 - 39967016
Alignment:
Q  304 atttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    |||| ||||||||||| |||||||||||||| |||||||| |||| ||| |||||||| ||||    
T  39967078 attttacatcaaatttatttcatctgaatgtccttaaattcatcatttacattcataaaattt 39967016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 40494658 - 40494736
Alignment:
Q  288 gcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagattt 366  Q
    ||||| ||||||||||||||||| ||||||||||||||| |  |||| |||||||  ||||||||| || |||| ||||    
T  40494658 gcttataacaattaaaatttcacttcaaatttctttcatttagatgtccttaaatccatcagttatgttaataaaattt 40494736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 434
Target Start/End: Original strand, 25223752 - 25223821
Alignment:
Q  365 ttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    |||||| |||||||||   ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  25223752 ttattcttcccattttgattgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 25223821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 39966914 - 39966845
Alignment:
Q  365 ttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    |||||| |||||||||   ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  39966914 ttattcttcccattttgattgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 39966845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 371
Target Start/End: Complemental strand, 39775035 - 39774955
Alignment:
Q  289 cttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcc 371  Q
    |||| ||||| |||||||| ||||||||||  ||||||||| |||| |||||||| |||| ||| |||||||| |||| ||||    
T  39775035 cttataacaaataaaattttacatcaaatt--tttcatctggatgtccttaaattcatcacttacattcataaaatttcttcc 39774955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 6644958 - 6645008
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||| | |||||||||| ||||||||| | ||||||||    
T  6644958 tgttcaattttgtcgtttcaaactgccgcagttttcaattatagtgagaat 6645008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 28391538 - 28391488
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||| ||||| | ||||||||    
T  28391538 tgttcaattttgtcgttccaaactgccgcaatttccaattatagtgagaat 28391488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 38552036 - 38552101
Alignment:
Q  296 caattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcataa 361  Q
    |||||||||||| |||| ||||||||||||||| ||| |||||  || ||| ||||| ||||||||    
T  38552036 caattaaaattttacattaaatttctttcatctaaatattcttggatctatgagttacattcataa 38552101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 185; Significance: 1e-100; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 221 - 465
Target Start/End: Complemental strand, 22914 - 22670
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttc 320  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  22914 ccataatataatattgccttaattatatttaggtgttcaatcttaattaattttcactacatgactggcttataacaattaaaatttcacatcaaatttc 22815  T
Q  321 tttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttca 420  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||   |||||||||||||||||||||||||| | ||||||||    
T  22814 tttcatctgaatgtccttaaatttatcagttatattcataaaatttattcctcctattttgattgttcaattttgtcgttcccaactgctgtatttttca 22715  T
Q  421 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22714 attttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 22670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 371
Target Start/End: Original strand, 20965 - 21077
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    |||||||||||||||||||||||| ||| ||    |||| ||||| |||||||| ||||||||||| ||||| | | |||| |||||||| |||| |||     
T  20965 tgttcaatcttaattaatttacactacaaga----cttataacaaataaaattttacatcaaatttatttcaac-ggatgtccttaaattcatcatttac 21059  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  21060 attcataaaattttttcc 21077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 434
Target Start/End: Original strand, 21193 - 21243
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| || ||||||| ||| ||||| ||||||||||    
T  21193 tgttcaattttgtcgttccaaattgccgcaatttccaattatcgtgagaat 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 221 - 465
Target Start/End: Original strand, 46534 - 46782
Alignment:
Q  221 ccataatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgctta----gaacaattaaaatttcacatcaaa 316  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||| ||||| |||||||| |||||    ||||||||||||||||||||||||    
T  46534 ccataatataatattgccttaattatatttaggtgttcaatcttaattaatctacactacatgactggcttaattagaacaattaaaatttcacatcaaa 46633  T
Q  317 tttctttcatctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcattt 416  Q
     ||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||| ||||    
T  46634 attctttcatctgaatgcccttaaatttatcagttatattcataaaatttattccttccattttgattgttcaattttgtcgttcccaactgccgtattt 46733  T
Q  417 ttcaattttcgtgagaatcgtcatgatttcaaatatcgtgagaattgtc 465  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  46734 ttcaatttttgtgagaatcgtcatgatttcaaatatcgtgagaaatgtc 46782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 48904 - 48791
Alignment:
Q  254 tgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttat 353  Q
    ||||||||||||||||| |||||| ||| ||||    || ||||| |||||||| |||||||||||||||| | || |||| |||||||| |||| |||     
T  48904 tgttcaatcttaattaacttacactacaagact----tataacaaataaaattttacatcaaatttctttcgtttggatgtccttaaattcatcatttac 48809  T
Q  354 attcataagatttattcc 371  Q
    |||||||| |||| ||||    
T  48808 attcataaaatttcttcc 48791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 127; Significance: 2e-65; HSPs: 3)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 224 - 438
Target Start/End: Original strand, 4916 - 5130
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||| ||||||||||||||  |||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||||    
T  4916 taatgtaatcttgacttaattatatttaggtgttcaatcttaattaatttacactacatgactagcttaaaacaattaagatttcacatcaaatttcttt 5015  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| ||| |||||||||   |||||||||||  |||||| |||||||||||||||  |||    
T  5016 catctgaatgttcttaaatttattagttacattcataaaatttcttcttcccattttgattgttcaattttaccgttccaaactgccgcatttttttatt 5115  T
Q  424 ttcgtgagaatcgtc 438  Q
    ||| |||||||||||    
T  5116 ttcatgagaatcgtc 5130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 5750 - 5622
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||||||||||| ||||||||||| ||| ||||    || ||||| |||||||| ||||||||||| ||||||||| |||| |||    
T  5750 ttaattatattaaggtgttcaatcttatttaatttacactacaagact----tataacaaataaaattttacatcaaatttttttcatctggatgtcctt 5655  T
Q  339 aaatttatcagttatattcataagatttattcc 371  Q
    ||||| |||| ||| |||||||| |||| ||||    
T  5654 aaattcatcacttacattcataaaatttcttcc 5622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 434
Target Start/End: Complemental strand, 5506 - 5456
Alignment:
Q  384 tgttcaattttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||||||||| |||||||||| ||||||||| | ||||||||    
T  5506 tgttcaattttgtcgttccaaactgccgcaattttcaattatagtgagaat 5456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 224 - 445
Target Start/End: Original strand, 18402 - 18622
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||||||| ||||||||||||||  |||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||    
T  18402 taatgtaatattgacttaattatatttaggtgtttaatcttaattaatttacactacatgactgacttagaacaattaaaatttcacatcaaatttcttt 18501  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
    ||||||||||| ||||||||||||||||| |||||||| |    ||| | |||||||   ||||||||||| ||||||| |||||||| |||||| ||||    
T  18502 catctgaatgtccttaaatttatcagttacattcataaaaaaatttctttccattttgattgttcaattttctcgttccaaactgccgtattttt-aatt 18600  T
Q  424 ttcgtgagaatcgtcatgattt 445  Q
    ||||||||||||||||| ||||    
T  18601 ttcgtgagaatcgtcatcattt 18622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 224 - 438
Target Start/End: Complemental strand, 57179 - 56968
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||||      
T  57179 taatgtaatcttgccttaattatatttaggtgttcaatcttaattaatttacactacaatactggcttagaacaattaaaatttcacatcaaatttct-- 57082  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccattttttctgttcaattttgtcgttcccaactgccgcatttttcaatt 423  Q
     || ||||||| ||||| ||||| | ||| |||||||| |||| ||  | |||||||   ||||||||||||||||||| || |||||||||||||||||    
T  57081 -atttgaatgtccttaagtttataatttacattcataaaatttcttgtttccattttgattgttcaattttgtcgttccaaattgccgcatttttcaatt 56983  T
Q  424 ttcgtgagaatcgtc 438  Q
    ||| |||||||||||    
T  56982 ttcatgagaatcgtc 56968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 371
Target Start/End: Original strand, 56387 - 56494
Alignment:
Q  260 atcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttcttaaatttatcagttatattcat 359  Q
    |||||||||||||||||| ||| ||||    || ||||| |||||||| |||||| |||||||||||||| |||| |||||||| |||| ||| ||||||    
T  56387 atcttaattaatttacactacaagact----tataacaaataaaattttacatcatatttctttcatctggatgtccttaaattcatcacttacattcat 56482  T
Q  360 aagatttattcc 371  Q
    || |||||||||    
T  56483 aaaatttattcc 56494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 224 - 380
Target Start/End: Original strand, 5073 - 5229
Alignment:
Q  224 taatgtaatattgccttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttcttt 323  Q
    ||||||||| |||||||||| |||||||  |||||||||||||||||||||||| |||  |||  |||| |||||||| ||||||||||||||  | |||    
T  5073 taatgtaatcttgccttaataatatttaggtgttcaatcttaattaatttacactacagaactgacttataacaattataatttcacatcaaaactgttt 5172  T
Q  324 catctgaatgttcttaaatttatcagttatattcataagatttattcctcccatttt 380  Q
    ||| ||||||| ||||||||||||| ||| |||||||| |||| ||| |||||||||    
T  5173 catttgaatgtccttaaatttatcaattacattcataaaatttcttcttcccatttt 5229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 361
Target Start/End: Complemental strand, 6047 - 5929
Alignment:
Q  239 ttaattatatttaaatgttcaatcttaattaatttacaccacatgactcgcttagaacaattaaaatttcacatcaaatttctttcatctgaatgttctt 338  Q
    ||||||||||| |  |||| |||||||||||||||||||  || ||||    || ||||| |||||||| ||||||||||||||||||||| || | | |    
T  6047 ttaattatattaaggtgtttaatcttaattaatttacactgcaagact----tataacaaataaaattttacatcaaatttctttcatctggatttccct 5952  T
Q  339 aaatttatcagttatattcataa 361  Q
    ||||| |||| ||| ||||||||    
T  5951 aaattcatcatttacattcataa 5929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 434
Target Start/End: Original strand, 5225 - 5269
Alignment:
Q  390 attttgtcgttcccaactgccgcatttttcaattttcgtgagaat 434  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  5225 attttgtcgttccaaactgctgcatttttcaattttcgtgagaat 5269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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