View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6855_low_50 (Length: 215)

Name: NF6855_low_50
Description: NF6855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6855_low_50
NF6855_low_50
[»] chr5 (26 HSPs)
chr5 (9-106)||(28372114-28372211)
chr5 (10-106)||(37600041-37600137)
chr5 (10-106)||(38146451-38146547)
chr5 (10-106)||(19510412-19510508)
chr5 (10-106)||(22338962-22339058)
chr5 (10-106)||(33473964-33474060)
chr5 (10-104)||(22335432-22335526)
chr5 (10-106)||(22120624-22120720)
chr5 (10-106)||(23113435-23113531)
chr5 (10-106)||(41878684-41878780)
chr5 (10-106)||(15238150-15238246)
chr5 (10-103)||(24768598-24768691)
chr5 (10-106)||(20294464-20294560)
chr5 (23-106)||(18354760-18354843)
chr5 (20-106)||(19474205-19474291)
chr5 (10-106)||(10751767-10751863)
chr5 (10-106)||(20912285-20912381)
chr5 (10-84)||(22108503-22108577)
chr5 (20-106)||(40727432-40727517)
chr5 (10-106)||(11219505-11219601)
chr5 (10-106)||(11224091-11224187)
chr5 (10-106)||(11227913-11228009)
chr5 (10-106)||(11226107-11226203)
chr5 (10-106)||(11229903-11229999)
chr5 (15-106)||(36459503-36459594)
chr5 (51-106)||(22749152-22749207)
[»] scaffold0026 (1 HSPs)
scaffold0026 (10-106)||(109551-109647)
[»] scaffold0012 (1 HSPs)
scaffold0012 (10-106)||(224175-224271)
[»] chr7 (48 HSPs)
chr7 (10-106)||(14420737-14420833)
chr7 (10-106)||(18871247-18871343)
chr7 (10-103)||(15166200-15166293)
chr7 (10-106)||(10897929-10898025)
chr7 (10-106)||(146450-146546)
chr7 (10-106)||(834078-834174)
chr7 (10-106)||(1199258-1199354)
chr7 (10-106)||(16004954-16005050)
chr7 (10-106)||(41283595-41283691)
chr7 (10-106)||(18606285-18606384)
chr7 (10-106)||(838166-838262)
chr7 (10-106)||(1203346-1203442)
chr7 (10-106)||(11660232-11660328)
chr7 (10-106)||(13891580-13891676)
chr7 (10-106)||(16110008-16110104)
chr7 (10-106)||(10607353-10607449)
chr7 (10-106)||(13891963-13892059)
chr7 (10-106)||(16582371-16582467)
chr7 (20-103)||(11302267-11302350)
chr7 (10-106)||(7520248-7520345)
chr7 (10-106)||(39268346-39268442)
chr7 (10-106)||(39721145-39721242)
chr7 (10-106)||(9752540-9752636)
chr7 (10-106)||(15083175-15083272)
chr7 (10-106)||(31675-31771)
chr7 (10-106)||(72404-72500)
chr7 (10-106)||(76513-76609)
chr7 (10-106)||(12706155-12706251)
chr7 (10-106)||(12713490-12713586)
chr7 (10-106)||(12722148-12722244)
chr7 (10-106)||(16908542-16908638)
chr7 (10-106)||(18277944-18278040)
chr7 (10-106)||(18281908-18282004)
chr7 (10-106)||(18424185-18424281)
chr7 (10-106)||(2531365-2531460)
chr7 (10-106)||(2833514-2833610)
chr7 (10-106)||(12717237-12717333)
chr7 (20-106)||(26291116-26291203)
chr7 (24-106)||(45171533-45171615)
chr7 (15-106)||(15213003-15213094)
chr7 (10-86)||(9752644-9752720)
chr7 (51-106)||(20486733-20486788)
chr7 (50-106)||(25928404-25928460)
chr7 (41-106)||(1860054-1860119)
chr7 (50-106)||(13919445-13919501)
chr7 (60-106)||(16185524-16185570)
chr7 (50-86)||(9752728-9752764)
chr7 (50-86)||(39268450-39268486)
[»] chr4 (39 HSPs)
chr4 (10-106)||(15533169-15533265)
chr4 (10-106)||(18211554-18211650)
chr4 (10-106)||(24048417-24048513)
chr4 (10-106)||(36036902-36036998)
chr4 (10-106)||(28384801-28384897)
chr4 (10-106)||(30145733-30145829)
chr4 (10-106)||(49549115-49549212)
chr4 (10-106)||(17052478-17052574)
chr4 (10-106)||(22634959-22635055)
chr4 (10-106)||(20158480-20158576)
chr4 (10-106)||(20163931-20164027)
chr4 (10-106)||(13813865-13813961)
chr4 (10-106)||(13818353-13818449)
chr4 (25-106)||(12422908-12422989)
chr4 (10-106)||(4562806-4562902)
chr4 (10-106)||(5758488-5758584)
chr4 (10-106)||(9555019-9555115)
chr4 (10-106)||(14759024-14759120)
chr4 (10-106)||(14955792-14955888)
chr4 (10-106)||(15223496-15223592)
chr4 (10-106)||(20161156-20161252)
chr4 (10-86)||(24048521-24048597)
chr4 (10-106)||(33740786-33740882)
chr4 (10-106)||(12486221-12486317)
chr4 (10-106)||(23996999-23997094)
chr4 (10-106)||(25688392-25688488)
chr4 (23-106)||(17807017-17807100)
chr4 (10-104)||(38106897-38106990)
chr4 (10-86)||(13818457-13818533)
chr4 (50-106)||(631780-631836)
chr4 (60-106)||(10711825-10711871)
chr4 (60-106)||(10925595-10925641)
chr4 (24-92)||(40906323-40906391)
chr4 (60-106)||(27532752-27532798)
chr4 (50-103)||(14047308-14047361)
chr4 (24-92)||(38106798-38106866)
chr4 (50-86)||(22635063-22635099)
chr4 (41-86)||(13813969-13814014)
chr4 (41-86)||(13818541-13818586)
[»] chr3 (56 HSPs)
chr3 (10-106)||(14764828-14764924)
chr3 (10-106)||(3801920-3802016)
chr3 (10-106)||(23372576-23372672)
chr3 (10-106)||(51299483-51299579)
chr3 (10-106)||(54519547-54519643)
chr3 (10-106)||(41084-41180)
chr3 (10-106)||(9532208-9532304)
chr3 (10-106)||(10834974-10835070)
chr3 (10-106)||(13435768-13435864)
chr3 (10-106)||(18899400-18899499)
chr3 (10-106)||(20249882-20249978)
chr3 (10-106)||(29545971-29546067)
chr3 (10-106)||(12853396-12853492)
chr3 (10-106)||(16795453-16795549)
chr3 (10-106)||(8928900-8928996)
chr3 (10-106)||(11301698-11301794)
chr3 (10-106)||(5219797-5219893)
chr3 (10-106)||(19774148-19774244)
chr3 (10-106)||(38312890-38312985)
chr3 (10-106)||(7108188-7108284)
chr3 (10-106)||(7112123-7112219)
chr3 (10-106)||(11068563-11068659)
chr3 (10-106)||(11167126-11167222)
chr3 (23-106)||(12304136-12304220)
chr3 (23-106)||(16326074-16326158)
chr3 (10-106)||(22320079-22320175)
chr3 (10-106)||(22335134-22335230)
chr3 (10-106)||(28948411-28948507)
chr3 (10-106)||(55021326-55021422)
chr3 (20-106)||(11853666-11853752)
chr3 (10-106)||(30064334-30064431)
chr3 (10-106)||(4108822-4108918)
chr3 (10-106)||(4112671-4112767)
chr3 (10-106)||(14664375-14664471)
chr3 (10-106)||(14667539-14667635)
chr3 (10-106)||(15616127-15616223)
chr3 (10-106)||(12337206-12337302)
chr3 (10-106)||(14497898-14497993)
chr3 (10-106)||(16751934-16752030)
chr3 (15-106)||(11912382-11912473)
chr3 (20-106)||(18933388-18933475)
chr3 (24-106)||(15963461-15963543)
chr3 (24-106)||(15967385-15967467)
chr3 (24-106)||(15971309-15971391)
chr3 (51-106)||(14670017-14670072)
chr3 (51-106)||(14681541-14681596)
chr3 (10-92)||(15564801-15564883)
chr3 (15-104)||(16840238-16840327)
chr3 (50-106)||(15463868-15463924)
chr3 (24-92)||(15555602-15555670)
chr3 (60-106)||(4590193-4590239)
chr3 (60-106)||(8491765-8491811)
chr3 (60-106)||(17318542-17318588)
chr3 (50-106)||(23173287-23173343)
chr3 (10-60)||(17348806-17348856)
chr3 (60-104)||(14068097-14068141)
[»] chr2 (21 HSPs)
chr2 (10-106)||(10686279-10686375)
chr2 (10-106)||(19663590-19663686)
chr2 (10-106)||(20260207-20260303)
chr2 (10-106)||(9240624-9240720)
chr2 (10-106)||(6481734-6481830)
chr2 (10-106)||(6485201-6485297)
chr2 (10-106)||(37378986-37379082)
chr2 (10-106)||(21074540-21074636)
chr2 (10-106)||(10103329-10103425)
chr2 (10-106)||(12902639-12902735)
chr2 (10-106)||(24630080-24630176)
chr2 (10-106)||(24645101-24645197)
chr2 (10-106)||(24647044-24647140)
chr2 (10-106)||(24647877-24647973)
chr2 (10-106)||(30346690-30346786)
chr2 (20-106)||(27381026-27381112)
chr2 (20-106)||(27384996-27385082)
chr2 (10-106)||(27600321-27600417)
chr2 (10-106)||(31343867-31343963)
chr2 (24-106)||(41532475-41532557)
chr2 (50-106)||(9783984-9784040)
[»] chr8 (26 HSPs)
chr8 (10-103)||(8729645-8729738)
chr8 (10-106)||(11774246-11774342)
chr8 (10-106)||(363218-363314)
chr8 (10-106)||(8415009-8415105)
chr8 (10-106)||(27942718-27942814)
chr8 (10-106)||(23427776-23427872)
chr8 (10-106)||(21409850-21409947)
chr8 (10-106)||(21804342-21804439)
chr8 (10-106)||(14399125-14399221)
chr8 (10-106)||(21829493-21829589)
chr8 (10-106)||(21974216-21974312)
chr8 (10-106)||(43250152-43250248)
chr8 (25-106)||(44385866-44385947)
chr8 (10-106)||(21978326-21978422)
chr8 (10-106)||(22110551-22110647)
chr8 (24-106)||(18864137-18864219)
chr8 (24-106)||(30941597-30941679)
chr8 (50-106)||(23913255-23913311)
chr8 (21-106)||(21328527-21328612)
chr8 (15-103)||(42560917-42561005)
chr8 (60-106)||(21386159-21386205)
chr8 (60-106)||(21968025-21968071)
chr8 (60-106)||(21980865-21980911)
chr8 (60-106)||(21985848-21985894)
chr8 (60-106)||(22000811-22000857)
chr8 (60-106)||(22009229-22009275)
[»] scaffold1427 (1 HSPs)
scaffold1427 (10-106)||(150-246)
[»] scaffold0544 (2 HSPs)
scaffold0544 (10-106)||(3549-3645)
scaffold0544 (10-70)||(1-61)
[»] chr6 (34 HSPs)
chr6 (10-106)||(4475745-4475841)
chr6 (10-106)||(12941171-12941267)
chr6 (10-106)||(23955319-23955415)
chr6 (10-106)||(27222782-27222878)
chr6 (10-106)||(28290927-28291023)
chr6 (10-106)||(22075423-22075519)
chr6 (10-106)||(14470831-14470927)
chr6 (10-106)||(23537931-23538027)
chr6 (10-106)||(27416560-27416656)
chr6 (10-104)||(31479497-31479591)
chr6 (10-106)||(8242362-8242458)
chr6 (10-106)||(11565351-11565447)
chr6 (10-106)||(11716973-11717069)
chr6 (10-106)||(12620366-12620462)
chr6 (10-106)||(23988253-23988349)
chr6 (10-106)||(27555490-27555585)
chr6 (10-106)||(23400627-23400724)
chr6 (10-106)||(16758665-16758761)
chr6 (10-106)||(22947617-22947713)
chr6 (10-106)||(22951573-22951669)
chr6 (10-106)||(23870061-23870157)
chr6 (10-106)||(23874017-23874113)
chr6 (24-106)||(23393605-23393687)
chr6 (24-106)||(23413513-23413595)
chr6 (10-106)||(22861705-22861801)
chr6 (33-106)||(19869160-19869233)
chr6 (15-106)||(1254114-1254205)
chr6 (15-106)||(34297805-34297896)
chr6 (20-106)||(16622797-16622881)
chr6 (10-106)||(25737842-25737938)
chr6 (50-104)||(2076276-2076330)
chr6 (60-106)||(18918613-18918659)
chr6 (60-106)||(18953516-18953562)
chr6 (50-86)||(23537887-23537923)
[»] chr1 (17 HSPs)
chr1 (10-106)||(32649017-32649113)
chr1 (10-106)||(16370875-16370971)
chr1 (10-104)||(29533837-29533931)
chr1 (10-103)||(20439188-20439281)
chr1 (10-106)||(22132131-22132227)
chr1 (10-106)||(33795983-33796079)
chr1 (10-106)||(1009212-1009308)
chr1 (10-106)||(1926828-1926924)
chr1 (10-106)||(16376848-16376944)
chr1 (10-106)||(20925842-20925938)
chr1 (20-106)||(20230171-20230258)
chr1 (10-106)||(41389697-41389793)
chr1 (10-106)||(39245203-39245297)
chr1 (10-106)||(39248758-39248852)
chr1 (10-106)||(52634218-52634314)
chr1 (50-106)||(41801311-41801367)
chr1 (60-106)||(21406253-21406299)
[»] scaffold0337 (1 HSPs)
scaffold0337 (15-106)||(10854-10945)
[»] scaffold0124 (2 HSPs)
scaffold0124 (10-103)||(37568-37661)
scaffold0124 (10-106)||(25600-25696)
[»] scaffold0842 (1 HSPs)
scaffold0842 (10-106)||(5192-5288)
[»] scaffold0080 (2 HSPs)
scaffold0080 (10-106)||(33887-33983)
scaffold0080 (56-106)||(28468-28518)
[»] scaffold0142 (1 HSPs)
scaffold0142 (10-103)||(8775-8868)
[»] scaffold1852 (1 HSPs)
scaffold1852 (10-106)||(853-949)
[»] scaffold0410 (1 HSPs)
scaffold0410 (20-106)||(14804-14890)
[»] scaffold0525 (1 HSPs)
scaffold0525 (10-106)||(5563-5659)
[»] scaffold0327 (1 HSPs)
scaffold0327 (10-106)||(18773-18869)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-106)||(70705-70801)
[»] scaffold0166 (1 HSPs)
scaffold0166 (10-103)||(11095-11188)
[»] scaffold0349 (1 HSPs)
scaffold0349 (10-106)||(11001-11097)
[»] scaffold0028 (1 HSPs)
scaffold0028 (10-106)||(60358-60454)
[»] scaffold0023 (1 HSPs)
scaffold0023 (10-106)||(11727-11823)
[»] scaffold0157 (1 HSPs)
scaffold0157 (10-106)||(34160-34256)
[»] scaffold0061 (1 HSPs)
scaffold0061 (10-106)||(68588-68684)
[»] scaffold0141 (1 HSPs)
scaffold0141 (24-106)||(15607-15689)
[»] scaffold0299 (1 HSPs)
scaffold0299 (10-106)||(5775-5871)
[»] scaffold0599 (1 HSPs)
scaffold0599 (15-106)||(4076-4167)
[»] scaffold0486 (1 HSPs)
scaffold0486 (23-106)||(8540-8623)
[»] scaffold0575 (1 HSPs)
scaffold0575 (50-106)||(6993-7049)
[»] scaffold0372 (1 HSPs)
scaffold0372 (10-106)||(6353-6448)
[»] scaffold0013 (1 HSPs)
scaffold0013 (50-106)||(74364-74420)
[»] scaffold0002 (1 HSPs)
scaffold0002 (10-94)||(115390-115473)
[»] scaffold0031 (1 HSPs)
scaffold0031 (59-106)||(37235-37282)
[»] scaffold0200 (1 HSPs)
scaffold0200 (58-106)||(10765-10813)
[»] scaffold0380 (1 HSPs)
scaffold0380 (60-106)||(3974-4020)
[»] scaffold0139 (1 HSPs)
scaffold0139 (60-106)||(23970-24016)
[»] scaffold0029 (1 HSPs)
scaffold0029 (60-106)||(62872-62918)
[»] scaffold1873 (2 HSPs)
scaffold1873 (10-69)||(641-700)
scaffold1873 (58-86)||(605-633)
[»] scaffold0109 (1 HSPs)
scaffold0109 (60-106)||(37230-37276)
[»] scaffold0001 (1 HSPs)
scaffold0001 (15-106)||(163600-163691)
[»] scaffold0293 (1 HSPs)
scaffold0293 (50-80)||(21390-21420)


Alignment Details
Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 28372211 - 28372114
Alignment:
Q  9 gacatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28372211 gacatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 28372114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 37600137 - 37600041
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37600137 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 37600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 38146547 - 38146451
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38146547 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagt 38146451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 19510412 - 19510508
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19510412 acatcatcatttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagt 19510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22338962 - 22339058
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22338962 acatcattatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacgtaacataaccatcatcaagt 22339058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 33474060 - 33473964
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33474060 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 33473964  T

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Target: chr5; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 22335432 - 22335526
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22335432 acatcattatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacgtaacataaccatcatcaa 22335526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 22120720 - 22120624
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22120720 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 22120624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 23113531 - 23113435
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  23113531 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacacaatcatcatcaagt 23113435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 41878780 - 41878684
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  41878780 acatcatcattccataataataattattcatcaaacattccattagcaattcataaataaaagacaacttatcaacttaacataactatcatcaagt 41878684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 15238246 - 15238150
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  15238246 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 15238150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 24768691 - 24768598
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24768691 acatcattaattcataatattaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatca 24768598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 20294464 - 20294560
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  20294464 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 20294560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 18354760 - 18354843
Alignment:
Q  23 ataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  18354760 ataataataattattcatcaaacatctcattatcaattcatgaataaaagacaatttatcaacttaacataaacatcatcaagt 18354843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 19474291 - 19474205
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  19474291 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 19474205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 10751767 - 10751863
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||| |||  ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  10751767 acatcattaattcataataataattattcatcaaccatctcattatcatttcttgaataaaagacaacttatcaacttaacataaacatcatcaagt 10751863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20912381 - 20912285
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||| ||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||  |||||||||||    
T  20912381 acatcattaattcataacaataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacatacacatcatcaagt 20912285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 22108577 - 22108503
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaa 84  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  22108577 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaa 22108503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 40727517 - 40727432
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||  | ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  40727517 ttcataataataattattcatcaaacatctctttatcaattcatgaataaaagataacttatcaacttaacataa-catcatcaagt 40727432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11219505 - 11219601
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||| ||||| || |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  11219505 acatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 11219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11224091 - 11224187
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||| ||||| || |||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11224091 acatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11224187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11227913 - 11228009
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||| ||||| || |||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11227913 acatcattaattcgtaatagtacttattcatcaaacatctcattatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11228009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11226107 - 11226203
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||| ||||| || |||||||||||||||  ||| | |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11226107 acatcattaattcgtaatagtacttattcatcaaacatctcatgatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11226203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11229903 - 11229999
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||| ||||| || |||||||||||||||  ||| | |||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  11229903 acatcattaattcgtaatagtacttattcatcaaacatctcatgatcaattcatgaataaaagacagcttatcaatttaacataaacatcatcaagt 11229999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 36459503 - 36459594
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||||||| |||  |||||||||  |||||||||   |||||||||||||||||||||| |||||| ||||    
T  36459503 atcaattcataacaataattattcatcaaccatctcattagcaaaacatgaataaggaacaacttatcaacttaacataatcatcattaagt 36459594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 22749152 - 22749207
Alignment:
Q  51 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  22749152 attaacaactcatgaatataggacaacttatcaacttaacataaccatcatcaagt 22749207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 109551 - 109647
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  109551 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 109647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 224271 - 224175
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  224271 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 224175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 14420737 - 14420833
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14420737 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14420833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18871247 - 18871343
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18871247 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18871343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 15166200 - 15166293
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15166200 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 15166293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10898025 - 10897929
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10898025 acatcatcatttcataataataattattcataaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10897929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 146450 - 146546
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  146450 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgagtagaagacaacttatcaacttaacataaccatcatcaagt 146546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 834174 - 834078
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  834174 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 834078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 1199354 - 1199258
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1199354 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 1199258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 16004954 - 16005050
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16004954 acatcatcatttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 16005050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 41283595 - 41283691
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41283595 acatcatcatttcataataataatttttcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 41283691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18606285 - 18606384
Alignment:
Q  10 acatcatcatttcataa---taataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18606285 acatcatcatttcataataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18606384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 838262 - 838166
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  838262 acatcatcaattcataataataattattcatcaaacattttattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 838166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 1203442 - 1203346
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1203442 acatcatcaattcataataataattattcatcaaacattttattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 1203346  T

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Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11660232 - 11660328
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11660232 acatcataatttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttaccaacttaacataaccatcatcaagt 11660328  T

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Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 13891580 - 13891676
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13891580 acatcatcaattcataataataattattcatcaaacatctcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 13891676  T

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Target: chr7; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 16110104 - 16110008
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16110104 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagataacttatcaacttaacataaccatcatcaagt 16110008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10607449 - 10607353
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10607449 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgactaaaagacaacttatcaacttaacataaccatcatcaagt 10607353  T

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Target: chr7; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 13891963 - 13892059
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  13891963 acatcatcaattcataataataattattcatcaaacatctcattagcaattcatgcaaaaaagacaacttatcaacttaacataaccatcatcaagt 13892059  T

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Target: chr7; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 16582371 - 16582467
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  16582371 acatcatcatttcataataataattattcatcaaacatctcattatcaattcatgaaaaaaagacaacttatcaacttatcataaccatcatcaagt 16582467  T

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Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 11302267 - 11302350
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  11302267 ttcataataataattattcatcaaacattccattagcattacatgaataaaagacaacttatcaacttaacataaccatcatca 11302350  T

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Target: chr7; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 7520345 - 7520248
Alignment:
Q  10 acatcatcatttcataataataatt-attcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7520345 acatcatcatttcataataataatttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagt 7520248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 39268442 - 39268346
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39268442 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaaggcaacttatcaacttaacataaccatcatcaagt 39268346  T

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Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 39721145 - 39721242
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39721145 acatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 39721242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 9752636 - 9752540
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  9752636 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaaggcaacttatcaacttaacataaccatcaccaagt 9752540  T

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Target: chr7; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 15083175 - 15083272
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaa-cttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15083175 acatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaattttaacataaccatcatcaagt 15083272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 31675 - 31771
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  31675 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 31771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 72500 - 72404
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  72500 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 72404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 76609 - 76513
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  76609 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 76513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 12706251 - 12706155
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12706251 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12706155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 12713490 - 12713586
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12713490 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12713586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 12722148 - 12722244
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12722148 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12722244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 16908638 - 16908542
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16908638 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 16908542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18277944 - 18278040
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  18277944 acatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaacttatcaatttaacataaacatcatcaagt 18278040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18281908 - 18282004
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  18281908 acatcattaattcataataataattattcatcaaacatctcattatcaattcatcaataaaagacaacttatcaatttaacataaacatcatcaagt 18282004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18424185 - 18424281
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||| |||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  18424185 acatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 18424281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 2531460 - 2531365
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||| ||||||  | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2531460 acatcattaattcataataataattattcataaaacatctctttatcaattcatgaataaaagacaacttatcaacttaacataa-catcatcaagt 2531365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 2833610 - 2833514
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||  |||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  2833610 acatcattaattcataataataattattcattgaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 2833514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 12717237 - 12717333
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| ||||| |||||    
T  12717237 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcagcaagt 12717333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 26291116 - 26291203
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||| ||||||||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26291116 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 26291203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 45171615 - 45171533
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  45171615 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 45171533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 15213003 - 15213094
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||||||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  15213003 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 15213094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 9752720 - 9752644
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||| |||||||||||||||||||||    
T  9752720 acatcatcaattcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaact 9752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 20486733 - 20486788
Alignment:
Q  51 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20486733 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 20486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 25928460 - 25928404
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  25928460 cattagcaattcatgaataaaaaacaacttatcaacttaacataaccatcataaagt 25928404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 1860119 - 1860054
Alignment:
Q  41 caaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  1860119 caaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagt 1860054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 13919501 - 13919445
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  13919501 cattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagt 13919445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 16185524 - 16185570
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||| ||||||||||||||||| ||| |||||||||    
T  16185524 tcatgaatagaagacgacttatcaacttaacatgaccctcatcaagt 16185570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 9752764 - 9752728
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  9752764 cattatcaattcatgaataaaagataacttatcaact 9752728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 39268486 - 39268450
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  39268486 cattagcaactcatgaatagaagacaacttatcaact 39268450  T

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Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 15533169 - 15533265
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15533169 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 15533265  T

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Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18211554 - 18211650
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18211554 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaactcaacataaccatcatcaagt 18211650  T

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Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 24048513 - 24048417
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24048513 acatcatcatttcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 24048417  T

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Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 36036902 - 36036998
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36036902 acatcatcatttcataataataattattcatgaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 36036998  T

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Target: chr4; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 28384801 - 28384897
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28384801 acatcatcatttcataataataattattcctcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 28384897  T

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Target: chr4; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 30145733 - 30145829
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30145733 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 30145829  T

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Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 49549212 - 49549115
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaac-ttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  49549212 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacggtatcaacttaacataaccatcatcaagt 49549115  T

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Target: chr4; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 17052574 - 17052478
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17052574 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataatcatcatcaagt 17052478  T

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Target: chr4; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 22635055 - 22634959
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22635055 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 22634959  T

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Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20158576 - 20158480
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20158576 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataagcatcatcaagt 20158480  T

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Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20164027 - 20163931
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20164027 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 20163931  T

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Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 13813961 - 13813865
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  13813961 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaacaaaaggcaacttatcaacttaacataaccatcatcaagt 13813865  T

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Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 13818449 - 13818353
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  13818449 acatcatcaattcataataataattattcatcaaacatctcattataaattcatgaataaaatgcaacttatcaacttaacataaccatcatcaagt 13818353  T

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Target: chr4; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 12422908 - 12422989
Alignment:
Q  25 aataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12422908 aataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataactatcatcaagt 12422989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 4562902 - 4562806
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  4562902 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 4562806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 5758584 - 5758488
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  5758584 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 5758488  T

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Target: chr4; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 9555019 - 9555115
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  9555019 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 9555115  T

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Target: chr4; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14759120 - 14759024
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14759120 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 14759024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14955888 - 14955792
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14955888 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 14955792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 15223496 - 15223592
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||| |||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  15223496 acatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 15223592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20161252 - 20161156
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  20161252 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcttgaataaaagacaacttatcaacttaacataaacattatcaagt 20161156  T

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Target: chr4; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 24048597 - 24048521
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  24048597 acatcatcatttcataataataattattcatcaaacatttcattaacaattcatgaataaaagacaacttagcaact 24048521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 33740786 - 33740882
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  33740786 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 33740882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 12486221 - 12486317
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12486221 acatcattaattcataataataattattcatcaaacatctcatcatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12486317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 23997094 - 23996999
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23997094 acatcattaattcataataatgattattcatcaaacatctcattatcaattcatgaataaaagagaacttatcaactt-acataaccatcatcaagt 23996999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 25688392 - 25688488
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  25688392 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 25688488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 17807017 - 17807100
Alignment:
Q  23 ataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  17807017 ataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 17807100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 38106897 - 38106990
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    ||||||| | ||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||| |||||||||    
T  38106897 acatcattaattcataataataattcttcatcaaacattc-attagcaactcatgaatgaaagacaatttatcaacttaacataaacatcatcaa 38106990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 13818533 - 13818457
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||  |||||||| |||||||||||||||||||||    
T  13818533 acatcatcaattcataataataattattcatcaaacatctcattataaattcatggataaaagacaacttatcaact 13818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 631836 - 631780
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  631836 cattagcaactcatgaatagaatacaacttatcaacttaacataaccatcatcaagt 631780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 10711825 - 10711871
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10711825 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 10711871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 10925595 - 10925641
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10925595 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 10925641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 40906323 - 40906391
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 92  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||||| ||||||||||| |||||||||||    
T  40906323 taataataattcttcataaaacatttcattagcaacttatgaatagaagacaacttaacaacttaacat 40906391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 27532752 - 27532798
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  27532752 tcatgaatagaaggcaacttatcaacttaacataaccatcatcaagt 27532798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 14047308 - 14047361
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||    
T  14047308 cattaacaactcatgaataaaatacaacttatcaacttaacataatcatcatca 14047361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 38106798 - 38106866
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 92  Q
    ||||||||||| ||||| ||||||  ||||||||| |||| |||| ||||||||||| |||||||||||    
T  38106798 taataataattcttcataaaacatctcattagcaactcataaatagaagacaacttaacaacttaacat 38106866  T

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Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 22635099 - 22635063
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22635099 cattatcaattcatgaataaaagacaacttatcaact 22635063  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 13814014 - 13813969
Alignment:
Q  41 caaacattccattagcaattcatgaataaaagacaacttatcaact 86  Q
    |||||||  ||||||||| ||||||||| |||||||||||||||||    
T  13814014 caaacatctcattagcaactcatgaatagaagacaacttatcaact 13813969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 13818586 - 13818541
Alignment:
Q  41 caaacattccattagcaattcatgaataaaagacaacttatcaact 86  Q
    |||||||  ||||||||| ||||||||| |||||||||||||||||    
T  13818586 caaacatctcattagcaactcatgaatagaagacaacttatcaact 13818541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14764924 - 14764828
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14764924 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14764828  T

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Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 3801920 - 3802016
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3801920 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 3802016  T

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Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 23372672 - 23372576
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23372672 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 23372576  T

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Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 51299483 - 51299579
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51299483 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 51299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 54519547 - 54519643
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54519547 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 54519643  T

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Target: chr3; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 41084 - 41180
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41084 acatcatcatttcataataataattattcctcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 41180  T

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Target: chr3; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 9532208 - 9532304
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9532208 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaactcaacataaccatcatcaagt 9532304  T

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Target: chr3; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10835070 - 10834974
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10835070 acatcatcatttcataataataattattcatcaaacatttcattagaaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10834974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 13435768 - 13435864
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13435768 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 13435864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18899400 - 18899499
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccatta---gcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18899400 acatcatcatttcataataataattattcatcaaacattccattattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 18899499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20249978 - 20249882
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20249978 acatcatcatttcataataatagttattcatcgaatattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 20249882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 29546067 - 29545971
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  29546067 acatcatcatttcataataataattattcatcaaaccttccattagcaattcatgactaaaagacaacttatcaacttaacacaaccatcatcaagt 29545971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 12853492 - 12853396
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12853492 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 12853396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 16795453 - 16795549
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16795453 acatcatcaattcataataataattattcatcaaacgtctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 16795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 8928996 - 8928900
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  8928996 acatcatcaattcataataataattattcatcaaacatctcattagcagtccatgaataaaagacaacttatcaacttaacataaccaccatcaagt 8928900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 11301794 - 11301698
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11301794 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 11301698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 5219797 - 5219893
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5219797 acatcattaattcataataataattattcatcaaacgtctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 5219893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 19774148 - 19774244
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  19774148 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 19774244  T

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Target: chr3; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 38312985 - 38312890
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattcc-attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38312985 acatcatcatttcataataataat-attcatcgaacattcccattagca-ttcatgaataaaagacaacttataaacttaacataaccatcatcaagt 38312890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 7108188 - 7108284
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  7108188 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 7108284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 7112123 - 7112219
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  7112123 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 7112219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11068563 - 11068659
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11068563 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11068659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 11167222 - 11167126
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11167222 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11167126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 12304136 - 12304220
Alignment:
Q  23 ataataata-attattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12304136 ataataatatataattcatcaaacattccatcagcaattcatgaataaaatacaacttatcaacttaacataaccatcatcaagt 12304220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 16326158 - 16326074
Alignment:
Q  23 ataataata-attattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  16326158 ataataatatataattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttgacataaccctcatcaagt 16326074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22320079 - 22320175
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  22320079 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 22320175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22335134 - 22335230
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  22335134 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 22335230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 28948411 - 28948507
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  28948411 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 28948507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 55021326 - 55021422
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  55021326 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 55021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 11853666 - 11853752
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||| |||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  11853666 ttcataataatacttattcatcaaacatctcattatcaattcgtgaataaaagacaacttatcaacttaacataaacatcatcaagt 11853752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 30064334 - 30064431
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||| ||||||||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30064334 acatcattaattcataataataattattcgtcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 30064431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 4108918 - 4108822
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||| ||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  4108918 acatcattaattcataataataattattcatcaaatatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 4108822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 4112767 - 4112671
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||| ||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  4112767 acatcattaattcataataataattattcatcaaatatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 4112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 14664375 - 14664471
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||  |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14664375 acatcattaattcataaatataattattcatcaaacatctcattatcaattcatgaatagaagacaacttatcaacttaacataaacatcatcaagt 14664471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 14667539 - 14667635
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||  |||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  14667539 acatcattaattcataaatataattattcatcaaacatctcattatcaattcatgaatagaagacaacttatcaacttaacataaacatcatcaagt 14667635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 15616127 - 15616223
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||| ||||||    
T  15616127 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcttcaagt 15616223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 12337206 - 12337302
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacat-tccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| ||||||||||||||| || |||| |||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  12337206 acatcatcaattcataataatacttattcatcaaacatctcaattatcaattcatgaataaaagacaac-tatcaatttaacataaacatcatcaagt 12337302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 14497898 - 14497993
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||| |||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  14497898 acatcattaattcataataataattattcatcaa-catctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 14497993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 16752030 - 16751934
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||| |||  ||||| || || |||||||||||| |||||||||||||||||||| |||||||||||    
T  16752030 acatcattaattcataataataattattcatcaaccatctcattatcatttgatgaataaaagataacttatcaacttaacataaacatcatcaagt 16751934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 11912382 - 11912473
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||||||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  11912382 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 11912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 18933475 - 18933388
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||| ||||||||  |||||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18933475 ttcataataataattattcgtcaaacatctcattattaattcatgaataaaatacaacttatcaactttaacataaccatcatcaagt 18933388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 15963461 - 15963543
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  15963461 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagt 15963543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 15967385 - 15967467
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  15967385 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagt 15967467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 15971309 - 15971391
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  15971309 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttattaatttaacataaacatcatcaagt 15971391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 14670017 - 14670072
Alignment:
Q  51 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14670017 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14670072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 14681541 - 14681596
Alignment:
Q  51 attagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14681541 attatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 14681596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 15564801 - 15564883
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 92  Q
    ||||||||| ||||||||||||||| ||||| ||||||| ||||||||| ||||||| | ||||||||  |||||||||||||    
T  15564801 acatcatcaattcataataataattcttcataaaacatttcattagcaactcatgaacagaagacaacacatcaacttaacat 15564883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 16840327 - 16840238
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    |||| ||||||| |||||||||||| |||  ||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||    
T  16840327 atcaattcataacaataattattcagcaagaatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaa 16840238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 15463868 - 15463924
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  15463868 cattatcaattcatgaataaaagacaacttatcaacttaacataaacgtcatcaagt 15463924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 15555602 - 15555670
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacat 92  Q
    ||||||||||| ||||||||||||  ||||||||| ||||||||| ||||||||||| |||||||||||    
T  15555602 taataataattcttcatcaaacatctcattagcaactcatgaatataagacaacttaacaacttaacat 15555670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 4590239 - 4590193
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  4590239 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 4590193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 8491811 - 8491765
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  8491811 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 8491765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 17318588 - 17318542
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17318588 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 17318542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 23173287 - 23173343
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  23173287 cattaacaactcatgaatagaagacaacttatcaacttaacataactatcatcaagt 23173343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 17348856 - 17348806
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaatt 60  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  17348856 acatcatcatttcataataataattattcatcaaacatctcattatcaatt 17348806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 14068141 - 14068097
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  14068141 tcatgaatagaagacaacttatcgacttaacataaccatcatcaa 14068097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10686375 - 10686279
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10686375 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10686279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 19663686 - 19663590
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19663686 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 19663590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 20260207 - 20260303
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20260207 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 20260303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 9240624 - 9240720
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9240624 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 9240720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 6481734 - 6481830
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6481734 acatcatcatttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagt 6481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 6485201 - 6485297
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6485201 acatcatcatttcataataataattattcatcaaacgttccattagcaattcatgaataaaagacaacctatcaacttaacataaccatcatcaagt 6485297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 37378986 - 37379082
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37378986 acatcatcatttcataataataatttttcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 37379082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21074636 - 21074540
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21074636 acatcatcatttcataataataattattcatcaaacatttttttagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 21074540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 10103425 - 10103329
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  10103425 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 10103329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 12902735 - 12902639
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12902735 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12902639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 24630176 - 24630080
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24630176 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24630080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24645101 - 24645197
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24645101 acatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24645197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24647044 - 24647140
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24647044 acatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24647140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24647877 - 24647973
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  24647877 acatcattaattcataataataattattcatcaaacatctcattaccaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 24647973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 30346786 - 30346690
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  30346786 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 30346690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 27381112 - 27381026
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  27381112 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 27381026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 27385082 - 27384996
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  27385082 ttcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 27384996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 27600321 - 27600417
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||| ||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  27600321 acatcattaattcataacaataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 27600417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 31343867 - 31343963
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  | ||| |||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  31343867 acatcattaattcataataataattattcatcaaacatctctttatcaattcatgaataaaagacagcttatcaacttaacatatacatcatcaagt 31343963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 41532557 - 41532475
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  41532557 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 41532475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 9783984 - 9784040
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9783984 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 9784040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 8729738 - 8729645
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8729738 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 8729645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11774246 - 11774342
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11774246 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 11774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 363218 - 363314
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  363218 acatcatcattccataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcatcttaacataaccatcaacaagt 363314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 8415105 - 8415009
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  8415105 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaaaataaccctaatcaagt 8415009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 27942814 - 27942718
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  27942814 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttattaacttatcataaccatcatcaagt 27942718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23427776 - 23427872
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23427776 acatcatcaatttataataataattattcatcaaacatttcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcattaagt 23427872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 21409850 - 21409947
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21409850 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaactttaacataaccatcatcaagt 21409947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 21804342 - 21804439
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  21804342 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaactttaacataaccatcatcaagt 21804439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14399221 - 14399125
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||| |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14399221 acatcattaattcgtaataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 14399125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21829589 - 21829493
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  21829589 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 21829493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21974312 - 21974216
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  21974312 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 21974216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 43250152 - 43250248
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  43250152 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 43250248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 44385947 - 44385866
Alignment:
Q  25 aataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  44385947 aataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaagttaacataatcatcatcaagt 44385866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 21978422 - 21978326
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||  |||||||| |||||||||||    
T  21978422 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatataacataaacatcatcaagt 21978326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22110551 - 22110647
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22110551 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaaaatcatcaagt 22110647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 18864219 - 18864137
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18864219 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 18864137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 30941679 - 30941597
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  30941679 taataatacttattcatcaaacatctcattatcaatttatgaataaaagacaacttatcaatttaacataaacatcatcaagt 30941597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 23913255 - 23913311
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23913255 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 23913311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 21328527 - 21328612
Alignment:
Q  21 tcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||| |||||||||||| ||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  21328527 tcataacaataattattcaacaagcatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 21328612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 42561005 - 42560917
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    |||| ||||||| |||||||||||||||| |||  |||||||||| |||||||||   ||||||| ||||||||||||||||| |||||    
T  42561005 atcaattcataacaataattattcatcaaccatctcattagcaatgcatgaataaggaacaacttgtcaacttaacataaccaccatca 42560917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 21386159 - 21386205
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21386159 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 21386205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 21968071 - 21968025
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21968071 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 21968025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 21980911 - 21980865
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21980911 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 21980865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 21985894 - 21985848
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  21985894 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 21985848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 22000857 - 22000811
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||    
T  22000857 tcatgaatagaagacaacttatcaacttaacataaccctcatcaagt 22000811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 22009275 - 22009229
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||    
T  22009275 tcatgaatagaacacaacttatcaacttaacataaccctcatcaagt 22009229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 150 - 246
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  150 acatcatcattacataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 246  T

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Target: scaffold0544 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 3645 - 3549
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3645 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 3549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 61 - 1
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  61 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 4475745 - 4475841
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4475745 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 4475841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 12941171 - 12941267
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941171 acatcatcatttcataataataattattcatcaaacattccatcagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 12941267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23955319 - 23955415
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23955319 acatcatcatttcataataataattattcatcaaacattccattaacaattcatgaataaaagacaacttatcaacttaacataaccctcatcaagt 23955415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 27222782 - 27222878
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27222782 acatcatcatttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 27222878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 28291023 - 28290927
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28291023 acatcatcatttcataataataattattcatcaaacattcaattagcaatttatgaataaaagacaacttatcaacttaacataaccatcatcaagt 28290927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 22075519 - 22075423
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22075519 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 22075423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 14470831 - 14470927
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  14470831 acatcattaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacctaacataaacatcatcaagt 14470927  T

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Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23537931 - 23538027
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  23537931 acatcatcaattcataataataattattcatcaaacatctcattaacaattcacgaataagggacaacttatcaacttaacataaccatcatcaagt 23538027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 27416656 - 27416560
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27416656 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacctatcaacttaacataaacatcatcaagt 27416560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 31479591 - 31479497
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||| |||||||||    
T  31479591 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaagacaacttatcaacttaacataaacatcatcaa 31479497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 8242362 - 8242458
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  8242362 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 8242458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11565351 - 11565447
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11565351 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11565447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 11717069 - 11716973
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11717069 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11716973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 12620462 - 12620366
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  12620462 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 12620366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23988253 - 23988349
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| |||| |||| |||||||||||    
T  23988253 acatcattaattcataataataattattcatcaaacatttcattatcaattcattaataaaagacaacttatcaatttaatataaacatcatcaagt 23988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 27555490 - 27555585
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27555490 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaac-tatcaacttaacataaacatcatcaagt 27555585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23400627 - 23400724
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||| | || |||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23400627 acatcattactttataataataattattcatcaaacatctcattatcaattcatgaataaaggacaacttatcaactttaacataaccatcatcaagt 23400724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 16758665 - 16758761
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  || || |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16758665 acatcattaattcataataataattattcatcaaacatctcactatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 16758761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22947617 - 22947713
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  22947617 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 22947713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22951573 - 22951669
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  22951573 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 22951669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23870061 - 23870157
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  23870061 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 23870157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 23874017 - 23874113
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  23874017 acatcattaattcataataataattattcatcaaacatctcattatcaattcactaataaaagacaacttatcaatttaacataaacatcatcaagt 23874113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 23393605 - 23393687
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23393605 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 23393687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 23413513 - 23413595
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23413513 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 23413595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 22861705 - 22861801
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||| |||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| ||||| |||||    
T  22861705 acatcattaattcataatcataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcaccaagt 22861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 19869160 - 19869233
Alignment:
Q  33 ttattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  19869160 ttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 19869233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 1254114 - 1254205
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||||||| |||  ||||| |||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  1254114 atcaattcataacaataattattcatcaaccatctcattaacaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 1254205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 34297896 - 34297805
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||||||| |||  |||||||||| |||||||||   |||||||||||||||||||||||||||| |||||    
T  34297896 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcagcaagt 34297805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 16622797 - 16622881
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| ||||| |||||||||||||  ||||| || ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  16622797 ttcataatgataatcattcatcaaacatctcattatcatttcatgaataaaag--aacttatcaacttaacataaacatcatcaagt 16622881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 25737842 - 25737938
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| |||| ||||||| | |||||||||| ||| |||  |||||||||| |||||||||  ||||||||||||||||| ||||| |||||||||||    
T  25737842 acattatcaattcataacagtaattattcagcaagcatctcattagcaatacatgaataagggacaacttatcaacttagcataatcatcatcaagt 25737938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 2076276 - 2076330
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  2076276 cattatcaattcatgaataaaaaacaacttatcaacttaacataatcatcatcaa 2076330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 18918659 - 18918613
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  18918659 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 18918613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 18953562 - 18953516
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  18953562 tcatgaatagaagacaacttatcgacttaacataatcatcatcaagt 18953516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 23537887 - 23537923
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaact 86  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23537887 cattagcaattcatgaataaaagacaacttagcaact 23537923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 32649017 - 32649113
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32649017 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataacaatcatcaagt 32649113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 16370875 - 16370971
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16370875 acatcatcatttcataataatagttattcatcgaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 16370971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 29533837 - 29533931
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 104  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29533837 acatcatcaattcataataataattattcatcaaacatttcattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaa 29533931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 20439281 - 20439188
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20439281 acatcatcattccataataataattattcatcaaacattccattagcaatacatgaataaaagacaacttatcaacttaacataaccatcatca 20439188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 22132227 - 22132131
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22132227 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 22132131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 33795983 - 33796079
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33795983 acatcattaattcataataataattattcatcaaacatatcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 33796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 1009212 - 1009308
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  1009212 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 1009308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 1926924 - 1926828
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  1926924 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 1926828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 16376944 - 16376848
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16376944 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 16376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20925938 - 20925842
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  20925938 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 20925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 20230258 - 20230171
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaac-ttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20230258 ttcataataataattattcatcaaacatctcattattaattcatgaataaaagacaacttatcaactttaacataaccatcatcaagt 20230171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 41389793 - 41389697
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||||||||||||||| |||  ||||| || ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  41389793 acatcattaattcataataataattattcatcaaccatctcattatcatttcatgaataaaaaacaacttatcaacttaacataaacatcatcaagt 41389697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 39245297 - 39245203
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| || ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  39245297 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaag--aacttatcaacttaacataaacatcatcaagt 39245203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 39248852 - 39248758
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| || ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  39248852 acatcattaattcataataataattattcatcaaacatctcattatcatttcatgaataaaag--aacttatcaacttaacataaacatcatcaagt 39248758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 52634218 - 52634314
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| ||||||| | |||||||||| ||||||||| |||||||||||    
T  52634218 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaaaataacttatcaatttaacataaacatcatcaagt 52634314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 41801367 - 41801311
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41801367 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 41801311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 21406253 - 21406299
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21406253 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 21406299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 10945 - 10854
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10945 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 10854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 37661 - 37568
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  37661 acatcatcaattcataataataattattcatcaaacattccattagcaatacatgaataaaagacaacgtatcaacttaacataaccatcatca 37568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 25696 - 25600
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25696 acatcatcaattcataataataattattcatcaaacatcacattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 25600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 5192 - 5288
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5192 acatcatcaattcatcataataattattcatcaaacattccattagcatttcatgaataatagacaacttatcaacttaacataaccatcatcaagt 5288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 33887 - 33983
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33887 acatcatcaattcataataataattattcatcaaacatctcattagcaattcatgaataaaagacaacttatcaacttaacataacgatcatcaagt 33983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 28468 - 28518
Alignment:
Q  56 caattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28468 caattcatgaataaaagacaacttatcaacttaacataacgatcatcaagt 28518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 8868 - 8775
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8868 acatcatcattttataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 8775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 949 - 853
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  949 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 14804 - 14890
Alignment:
Q  20 ttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14804 ttcataataataattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 14890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 5659 - 5563
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5659 acatcattaattcataataacaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatcaagt 5563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 18773 - 18869
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| || ||||||| |||||||||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18773 acatcatcaatttataataacaattattcatcaaacatctcattatcaattcatgaataaatgacaacttatcaacttaacataaccatcatcaagt 18869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 70705 - 70801
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  70705 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacctatcaacttaacataaacatcatcaagt 70801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 11188 - 11095
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatca 103  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11188 acatcattaattcataatattaattattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaacttaacataaacatcatca 11095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11001 - 11097
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  11001 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 11097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 60454 - 60358
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  60454 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 60358  T

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Target: scaffold0023 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 11727 - 11823
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  11727 acatcatcaattcataataatacttattcatcaaacatctcattatcaattcatgtataaaagacaacatatcaacttaacataagcatcatcaagt 11823  T

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Target: scaffold0157 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 34256 - 34160
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||| | |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  34256 acatcattaattcataataataattattcatcaaacatctcatcatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 34160  T

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Target: scaffold0061 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 68684 - 68588
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||||||||||| ||||||||| || ||||||||    
T  68684 acatcattaattcataataataattattcatcaaacatctcattatcaattcattaataaaagacaacttatcaatttaacataaacaccatcaagt 68588  T

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Target: scaffold0141 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 15689 - 15607
Alignment:
Q  24 taataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  15689 taataatacttattcatcaaacatctcattatcaattcatgaataaaagacaacttatcaatttaacataaacatcatcaagt 15607  T

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Target: scaffold0299 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 5775 - 5871
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacat-tccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||| ||||||||||||| | || |||| |||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  5775 acatcatcaattcataataatacttattcatcaaacgtctcaattatcaattcatgaataaaagacaac-tatcaacttaacataaacatcatcaagt 5871  T

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Target: scaffold0599 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 4076 - 4167
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||||||| |||  |||||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  4076 atcaattcataacaataattattcatcaaccatctcattagcaatacatgaataaggaacaacttatcaacttaacataaccatcatcaagt 4167  T

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Target: scaffold0486 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 8540 - 8623
Alignment:
Q  23 ataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||| |||||||||||||  ||||| || ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  8540 ataataataatcattcatcaaacatctcattatcatttcatgaataaaagacaacttattaacttaacataaacatcatcaagt 8623  T

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Target: scaffold0575 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 7049 - 6993
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7049 cattatcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 6993  T

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Target: scaffold0372 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 6448 - 6353
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||| | |||||||||||| ||||||||||| |||  ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  6448 acatcattaattcataataatagttattcatcaa-catctcattatcaattcattaataaaagacaacttatcaatttaacataaacatcatcaagt 6353  T

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Target: scaffold0013 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 74420 - 74364
Alignment:
Q  50 cattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  74420 cattagcaactcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 74364  T

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Target: scaffold0002 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 115473 - 115390
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataa 94  Q
    ||||||||| ||||||| |||| |||||||||||||||  ||||| |||||||||||||||||||||| ||||||||||||||||    
T  115473 acatcatcaattcataaaaatacttattcatcaaacatctcattatcaattcatgaataaaagacaac-tatcaacttaacataa 115390  T

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Target: scaffold0031 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 37282 - 37235
Alignment:
Q  59 ttcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37282 ttcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 37235  T

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Target: scaffold0200 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 10765 - 10813
Alignment:
Q  58 attcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10765 attcatgaataaaatacaacttatcaacttaacataaccatcatcaagt 10813  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 3974 - 4020
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3974 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 4020  T

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Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 24016 - 23970
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  24016 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 23970  T

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Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 62918 - 62872
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  62918 tcatgaatagaagacaacttatcaacttaacataaccatcatcaagt 62872  T

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Target: scaffold1873 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 641 - 700
Alignment:
Q  10 acatcatcatttcataataataattattcatcaaacattccattagcaattcatgaataa 69  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||| ||||    
T  641 acatcatcaattcataataataattattcatcaaacatctcattatcaattcatggataa 700  T

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Target: scaffold1873; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 605 - 633
Alignment:
Q  58 attcatgaataaaagacaacttatcaact 86  Q
    |||||||||||||||||||||||||||||    
T  605 attcatgaataaaagacaacttatcaact 633  T

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Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 37276 - 37230
Alignment:
Q  60 tcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  37276 tcatgaatagaagacaacttatcgacttaacataaccatcatcaagt 37230  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 163691 - 163600
Alignment:
Q  15 atcatttcataataataattattcatcaaacattccattagcaattcatgaataaaagacaacttatcaacttaacataaccatcatcaagt 106  Q
    |||| ||||||| |||||||||||| ||| |||  ||||| |||  |||||||||   |||| ||||||||||||||||||| |||||||||    
T  163691 atcaattcataacaataattattcagcaagcatctcattaccaaaacatgaataaggaacaagttatcaacttaacataaccctcatcaagt 163600  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 80
Target Start/End: Complemental strand, 21420 - 21390
Alignment:
Q  50 cattagcaattcatgaataaaagacaactta 80  Q
    |||||||||||||||||||||||||||||||    
T  21420 cattagcaattcatgaataaaagacaactta 21390  T

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