View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6856_low_9 (Length: 435)
Name: NF6856_low_9
Description: NF6856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6856_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 17 - 431
Target Start/End: Complemental strand, 5033384 - 5032970
Alignment:
| Q |
17 |
aataaatttccaccaaattcgtcgagtctgaatttgagctaacaatgtccaatatgtttccattaggcagacgatttactatagctagtacatgaatcat |
116 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5033384 |
aataaatttgtaccaaattcgtcgagtctgaatttgagctaacaatgtccaatatgtttccattaggcagacgatttactatagctagtacatgaatcat |
5033285 |
T |
|
| Q |
117 |
aactatattcatgtgctttctgccacttgtcaaacatagaaatgacgaaatagacgtgccctagcatgtctcatggaccatatataatggtaggtgccaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5033284 |
aactatattcatgtgctttctgccacttgtcaaacatagaaatgacgaaatagacgtgccctagcatgtctcatggaccatatataatggtaggtgccaa |
5033185 |
T |
|
| Q |
217 |
ccattagaaatctttttaatatctttctaagttttggatcacattaacatagatccaaatatgtcgaaatccaacccgatccgttttggatccgcttcat |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
5033184 |
ccattagaaatctttttaatatctttctaagttttggatcacattaacatacatccaaatacgtcgaaatccaacccgatccgttttggatccgcttcat |
5033085 |
T |
|
| Q |
317 |
accataactttttcaatggctagctttagatttcatccttgcttaacacctaaatggctcctaaccgacgttggaatcttttattgatggagttttaatt |
416 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| ||| |||| || |||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
5033084 |
accataactttttcaatggctagctttagatttcatcgttgggtaatacctgaacggctcctaactgacgttggaatcttttattgatggagttttaatt |
5032985 |
T |
|
| Q |
417 |
gtaacgacctctcat |
431 |
Q |
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||||||| ||||||| |
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| T |
5032984 |
gtaacgatctctcat |
5032970 |
T |
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