View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6858_high_12 (Length: 228)
Name: NF6858_high_12
Description: NF6858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6858_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 931835 - 932056
Alignment:
| Q |
7 |
gactacaattcacaatgtctttgatttgaacttcaatttcaatagtttatagtatgttttacaattttctctattaaccattcagaaagaaaagaacaac |
106 |
Q |
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| T |
931835 |
gactacaattcacaatgtctttgatttgaacttcaatttcaatagtttatagtatgttttacaattttctctattaaccattcagaaagaaaagaacaac |
931934 |
T |
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| Q |
107 |
agatcattggaagaggttcataagcccgattacgtggcgctgtaagtggattgagttgaaactgaggtcacttcactctcaagaacgtaaatatgaaaaa |
206 |
Q |
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| T |
931935 |
agatcattggaagaggttcataagcccgattacgtggcgctgtaagtggattgagttgaaactgaggtcacttcactctcaagaacgtaaatatgaaaaa |
932034 |
T |
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| Q |
207 |
gagcttgcggcactcaattata |
228 |
Q |
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| T |
932035 |
gagcttgcggcactcaattata |
932056 |
T |
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