View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6858_low_16 (Length: 213)

Name: NF6858_low_16
Description: NF6858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6858_low_16
NF6858_low_16
[»] chr5 (50 HSPs)
chr5 (3-151)||(10298553-10298701)
chr5 (36-170)||(8419992-8420121)
chr5 (77-150)||(21351906-21351979)
chr5 (65-149)||(31084309-31084393)
chr5 (77-142)||(42893353-42893418)
chr5 (36-151)||(13287354-13287474)
chr5 (77-148)||(6247609-6247680)
chr5 (167-213)||(10298510-10298556)
chr5 (77-151)||(21191057-21191131)
chr5 (82-151)||(14674253-14674322)
chr5 (83-140)||(15405062-15405119)
chr5 (83-151)||(39698525-39698593)
chr5 (91-149)||(41995457-41995515)
chr5 (77-134)||(21576746-21576803)
chr5 (77-142)||(33178018-33178083)
chr5 (70-142)||(41633728-41633800)
chr5 (36-71)||(3966597-3966632)
chr5 (66-140)||(5894823-5894897)
chr5 (77-151)||(21522734-21522808)
chr5 (77-151)||(21533300-21533374)
chr5 (77-142)||(30135306-30135372)
chr5 (77-138)||(7677702-7677763)
chr5 (93-162)||(17925189-17925258)
chr5 (77-137)||(21542028-21542088)
chr5 (36-135)||(22423765-22423871)
chr5 (77-164)||(3966474-3966561)
chr5 (36-71)||(14873605-14873640)
chr5 (36-71)||(17123130-17123165)
chr5 (36-71)||(21576686-21576721)
chr5 (36-148)||(24906253-24906373)
chr5 (36-71)||(35017126-35017161)
chr5 (84-151)||(4105241-4105310)
chr5 (82-136)||(12159951-12160005)
chr5 (36-70)||(16304367-16304401)
chr5 (102-140)||(18316951-18316989)
chr5 (77-151)||(19579685-19579759)
chr5 (37-71)||(21190998-21191032)
chr5 (77-151)||(37328845-37328919)
chr5 (36-70)||(39698636-39698670)
chr5 (37-71)||(43001888-43001922)
chr5 (82-151)||(17177029-17177098)
chr5 (37-70)||(18421779-18421812)
chr5 (91-160)||(30098301-30098370)
chr5 (38-71)||(39268541-39268574)
chr5 (39-71)||(4105342-4105374)
chr5 (103-151)||(6770527-6770575)
chr5 (103-151)||(19552570-19552618)
chr5 (37-69)||(21351852-21351884)
chr5 (77-137)||(30183547-30183607)
chr5 (84-128)||(43001807-43001851)
[»] chr6 (45 HSPs)
chr6 (77-170)||(7801157-7801250)
chr6 (36-151)||(426479-426589)
chr6 (36-142)||(2117069-2117174)
chr6 (65-184)||(12696277-12696394)
chr6 (77-184)||(28715243-28715353)
chr6 (82-148)||(1681745-1681811)
chr6 (77-151)||(9107371-9107445)
chr6 (77-151)||(15489733-15489807)
chr6 (77-151)||(34595118-34595192)
chr6 (77-150)||(10770675-10770748)
chr6 (77-150)||(16766682-16766755)
chr6 (84-184)||(8776981-8777086)
chr6 (82-149)||(16833294-16833361)
chr6 (36-150)||(7938101-7938218)
chr6 (77-151)||(8365520-8365594)
chr6 (77-148)||(17302543-17302615)
chr6 (85-151)||(17841598-17841664)
chr6 (77-151)||(28152083-28152156)
chr6 (82-148)||(31959146-31959212)
chr6 (77-142)||(853860-853925)
chr6 (77-142)||(7977831-7977896)
chr6 (83-132)||(31384923-31384972)
chr6 (82-137)||(1191706-1191761)
chr6 (77-142)||(4877935-4878001)
chr6 (77-170)||(7027206-7027300)
chr6 (84-127)||(4118341-4118384)
chr6 (36-71)||(4878025-4878060)
chr6 (36-71)||(7248452-7248487)
chr6 (36-71)||(17327591-17327626)
chr6 (91-170)||(34225824-34225906)
chr6 (77-151)||(3398603-3398676)
chr6 (36-150)||(5732475-5732584)
chr6 (77-151)||(7930289-7930363)
chr6 (82-128)||(9522898-9522944)
chr6 (36-70)||(9629478-9629512)
chr6 (36-70)||(10842617-10842651)
chr6 (36-70)||(17841530-17841564)
chr6 (36-69)||(7723200-7723233)
chr6 (38-71)||(32978842-32978875)
chr6 (77-142)||(33001290-33001355)
chr6 (88-136)||(5970120-5970168)
chr6 (91-135)||(24115862-24115906)
chr6 (82-142)||(30866150-30866210)
chr6 (35-71)||(31385013-31385049)
chr6 (35-71)||(31959233-31959269)
[»] chr4 (55 HSPs)
chr4 (36-151)||(30298930-30299047)
chr4 (36-151)||(30327798-30327915)
chr4 (65-142)||(12895105-12895182)
chr4 (77-136)||(24613702-24613761)
chr4 (84-162)||(11596360-11596438)
chr4 (77-151)||(12797339-12797412)
chr4 (77-151)||(23292987-23293061)
chr4 (82-159)||(24543957-24544035)
chr4 (77-135)||(54580024-54580082)
chr4 (84-149)||(19482654-19482719)
chr4 (84-149)||(40481623-40481687)
chr4 (65-137)||(3947755-3947827)
chr4 (77-137)||(21945501-21945561)
chr4 (84-145)||(715615-715677)
chr4 (84-145)||(752941-753003)
chr4 (77-170)||(4157112-4157207)
chr4 (83-149)||(14126118-14126184)
chr4 (82-128)||(29205451-29205497)
chr4 (77-151)||(35157986-35158060)
chr4 (77-142)||(2361976-2362041)
chr4 (89-134)||(14465088-14465133)
chr4 (83-128)||(28964255-28964300)
chr4 (103-184)||(32273553-32273633)
chr4 (83-151)||(4383352-4383419)
chr4 (36-72)||(4383448-4383484)
chr4 (102-162)||(11110708-11110768)
chr4 (36-68)||(12884348-12884380)
chr4 (77-157)||(16073373-16073452)
chr4 (81-151)||(20633469-20633536)
chr4 (83-142)||(28084514-28084574)
chr4 (82-142)||(31800484-31800544)
chr4 (77-137)||(34306805-34306864)
chr4 (36-71)||(715546-715581)
chr4 (36-71)||(752872-752907)
chr4 (36-71)||(824217-824252)
chr4 (36-71)||(5775305-5775340)
chr4 (36-71)||(14465006-14465041)
chr4 (37-127)||(22440559-22440651)
chr4 (36-71)||(23292927-23292962)
chr4 (36-71)||(24613631-24613666)
chr4 (36-71)||(35239202-35239237)
chr4 (36-71)||(37203335-37203370)
chr4 (83-142)||(38847019-38847078)
chr4 (77-151)||(49431009-49431084)
chr4 (36-70)||(3064869-3064903)
chr4 (43-73)||(17210039-17210069)
chr4 (84-150)||(27706185-27706251)
chr4 (82-127)||(6485617-6485662)
chr4 (77-142)||(12895275-12895340)
chr4 (36-73)||(18844424-18844461)
chr4 (38-71)||(28084607-28084640)
chr4 (84-163)||(37203239-37203315)
chr4 (35-63)||(3947701-3947729)
chr4 (91-151)||(36635308-36635368)
chr4 (84-140)||(51701253-51701309)
[»] chr7 (41 HSPs)
chr7 (70-162)||(9408328-9408420)
chr7 (36-141)||(3991318-3991431)
chr7 (36-148)||(35861951-35862069)
chr7 (77-151)||(11061077-11061151)
chr7 (77-151)||(18215187-18215261)
chr7 (82-184)||(24105631-24105731)
chr7 (36-151)||(27945025-27945136)
chr7 (66-151)||(13770675-13770760)
chr7 (77-142)||(24339635-24339700)
chr7 (77-137)||(7438704-7438764)
chr7 (66-170)||(9778462-9778569)
chr7 (84-142)||(25481895-25481953)
chr7 (65-150)||(5409825-5409910)
chr7 (85-142)||(8234139-8234196)
chr7 (65-148)||(32094009-32094093)
chr7 (77-184)||(43027470-43027576)
chr7 (36-71)||(1433542-1433577)
chr7 (77-164)||(11665441-11665528)
chr7 (34-69)||(18035804-18035839)
chr7 (77-148)||(33994199-33994270)
chr7 (86-164)||(11831404-11831481)
chr7 (82-128)||(26033467-26033513)
chr7 (77-142)||(7197298-7197363)
chr7 (77-149)||(6630913-6630985)
chr7 (70-142)||(25822648-25822720)
chr7 (36-71)||(5409772-5409807)
chr7 (77-137)||(11272587-11272649)
chr7 (36-71)||(29763130-29763165)
chr7 (36-71)||(40131940-40131975)
chr7 (36-70)||(15680893-15680927)
chr7 (103-149)||(29763201-29763247)
chr7 (81-151)||(43249977-43250047)
chr7 (36-69)||(2334345-2334378)
chr7 (104-149)||(21826259-21826304)
chr7 (36-69)||(30813882-30813915)
chr7 (84-132)||(7058429-7058477)
chr7 (103-151)||(10042921-10042969)
chr7 (70-149)||(21560484-21560568)
chr7 (91-151)||(29787384-29787444)
chr7 (82-142)||(40287363-40287422)
chr7 (77-121)||(48438560-48438604)
[»] chr1 (57 HSPs)
chr1 (83-157)||(32434723-32434798)
chr1 (36-149)||(22881568-22881689)
chr1 (77-184)||(38078662-38078769)
chr1 (77-164)||(37598803-37598889)
chr1 (36-151)||(48450551-48450662)
chr1 (77-160)||(31672896-31672979)
chr1 (77-140)||(40258934-40258997)
chr1 (77-151)||(1704993-1705067)
chr1 (36-169)||(24334665-24334799)
chr1 (77-135)||(24577187-24577245)
chr1 (71-135)||(28273083-28273147)
chr1 (76-151)||(1815241-1815316)
chr1 (77-164)||(46348384-46348470)
chr1 (84-142)||(113292-113350)
chr1 (65-135)||(1486698-1486768)
chr1 (86-164)||(18556466-18556543)
chr1 (84-142)||(32461471-32461529)
chr1 (36-137)||(35702543-35702649)
chr1 (77-151)||(42359450-42359524)
chr1 (91-184)||(398780-398878)
chr1 (35-184)||(3490347-3490497)
chr1 (82-142)||(21378571-21378631)
chr1 (77-149)||(47989484-47989555)
chr1 (77-140)||(6332666-6332728)
chr1 (36-71)||(9828138-9828173)
chr1 (77-135)||(18190109-18190167)
chr1 (77-135)||(22515888-22515946)
chr1 (77-126)||(18337338-18337387)
chr1 (70-151)||(38503304-38503385)
chr1 (77-137)||(51410022-51410083)
chr1 (36-149)||(30359374-30359483)
chr1 (82-134)||(31015044-31015096)
chr1 (91-151)||(34298420-34298480)
chr1 (40-71)||(5898211-5898242)
chr1 (83-137)||(6427459-6427516)
chr1 (83-142)||(14359529-14359587)
chr1 (36-71)||(22947813-22947848)
chr1 (36-71)||(37598914-37598949)
chr1 (36-71)||(47989591-47989626)
chr1 (91-149)||(2288182-2288240)
chr1 (77-151)||(5376501-5376575)
chr1 (77-127)||(6612172-6612222)
chr1 (37-71)||(16297223-16297257)
chr1 (36-70)||(21365993-21366027)
chr1 (36-70)||(22515828-22515862)
chr1 (37-71)||(42359391-42359425)
chr1 (83-128)||(5927347-5927392)
chr1 (92-161)||(9828019-9828087)
chr1 (77-142)||(19058857-19058922)
chr1 (65-164)||(35919265-35919370)
chr1 (77-170)||(36878427-36878519)
chr1 (84-132)||(2283669-2283717)
chr1 (91-151)||(6427334-6427394)
chr1 (103-151)||(9103624-9103672)
chr1 (103-151)||(16812527-16812575)
chr1 (77-135)||(17778549-17778604)
chr1 (35-71)||(40258873-40258909)
[»] chr2 (38 HSPs)
chr2 (36-151)||(19536362-19536473)
chr2 (83-184)||(21374706-21374807)
chr2 (36-151)||(20539633-20539749)
chr2 (77-164)||(37558949-37559035)
chr2 (77-151)||(15657848-15657922)
chr2 (36-142)||(18255945-18256046)
chr2 (77-151)||(30717531-30717605)
chr2 (77-151)||(15972857-15972931)
chr2 (77-151)||(18421947-18422021)
chr2 (36-160)||(24894363-24894486)
chr2 (77-151)||(30335401-30335475)
chr2 (82-151)||(6940239-6940308)
chr2 (77-150)||(18841014-18841087)
chr2 (82-151)||(23718010-23718079)
chr2 (82-151)||(24105682-24105751)
chr2 (82-151)||(30404856-30404925)
chr2 (77-137)||(20473320-20473380)
chr2 (77-136)||(974746-974805)
chr2 (85-164)||(37419714-37419793)
chr2 (77-135)||(2438720-2438778)
chr2 (77-170)||(26769471-26769569)
chr2 (77-142)||(12668424-12668489)
chr2 (82-135)||(12940941-12940994)
chr2 (35-128)||(34691769-34691857)
chr2 (35-128)||(34714181-34714269)
chr2 (84-149)||(38117167-38117232)
chr2 (77-149)||(36756345-36756417)
chr2 (77-137)||(5040730-5040792)
chr2 (66-184)||(14996213-14996330)
chr2 (77-151)||(23058443-23058518)
chr2 (36-71)||(26769605-26769640)
chr2 (36-71)||(37419837-37419872)
chr2 (36-71)||(42511323-42511358)
chr2 (37-71)||(2438661-2438695)
chr2 (77-135)||(11223864-11223922)
chr2 (36-73)||(28596550-28596587)
chr2 (84-149)||(29176501-29176566)
chr2 (83-151)||(21091707-21091775)
[»] scaffold0011 (1 HSPs)
scaffold0011 (76-162)||(17749-17835)
[»] scaffold0027 (1 HSPs)
scaffold0027 (36-184)||(46628-46775)
[»] chr3 (51 HSPs)
chr3 (37-128)||(25948848-25948939)
chr3 (70-164)||(34910289-34910382)
chr3 (77-148)||(10954939-10955010)
chr3 (77-151)||(10335287-10335361)
chr3 (39-135)||(21256952-21257045)
chr3 (77-151)||(55401059-55401133)
chr3 (84-148)||(4987299-4987363)
chr3 (83-142)||(14209106-14209165)
chr3 (82-149)||(20503451-20503518)
chr3 (77-151)||(8587022-8587096)
chr3 (77-162)||(25775481-25775567)
chr3 (77-151)||(28917985-28918059)
chr3 (83-184)||(14216845-14216944)
chr3 (83-184)||(14222974-14223073)
chr3 (77-169)||(21479079-21479176)
chr3 (82-135)||(26508110-26508163)
chr3 (77-142)||(28812508-28812573)
chr3 (77-184)||(39756188-39756294)
chr3 (68-137)||(49651778-49651847)
chr3 (44-140)||(7928445-7928536)
chr3 (106-162)||(10318064-10318119)
chr3 (87-184)||(14747513-14747610)
chr3 (77-149)||(14829676-14829747)
chr3 (77-149)||(16000017-16000089)
chr3 (91-162)||(21305218-21305290)
chr3 (81-137)||(35994743-35994798)
chr3 (77-140)||(1509534-1509597)
chr3 (83-150)||(10268493-10268560)
chr3 (83-142)||(14832092-14832151)
chr3 (36-71)||(34910400-34910435)
chr3 (77-140)||(51206354-51206417)
chr3 (103-160)||(8412972-8413029)
chr3 (83-169)||(32400715-32400798)
chr3 (77-149)||(41961651-41961723)
chr3 (77-136)||(750619-750678)
chr3 (36-71)||(4990913-4990948)
chr3 (36-71)||(20503548-20503583)
chr3 (36-71)||(34185053-34185088)
chr3 (36-70)||(8789489-8789523)
chr3 (36-70)||(8842413-8842447)
chr3 (77-151)||(15796295-15796369)
chr3 (81-151)||(24205046-24205116)
chr3 (77-151)||(26492206-26492280)
chr3 (103-149)||(40052318-40052364)
chr3 (36-70)||(55401159-55401193)
chr3 (92-137)||(14979179-14979224)
chr3 (77-142)||(34185124-34185189)
chr3 (84-136)||(3164033-3164085)
chr3 (82-150)||(17005625-17005693)
chr3 (77-137)||(27505244-27505304)
chr3 (82-142)||(29508437-29508497)
[»] chr8 (43 HSPs)
chr8 (77-151)||(22651960-22652034)
chr8 (84-164)||(36450762-36450841)
chr8 (85-156)||(30271300-30271371)
chr8 (77-151)||(15816130-15816204)
chr8 (77-146)||(4298887-4298956)
chr8 (77-184)||(25566789-25566899)
chr8 (77-136)||(29447111-29447170)
chr8 (77-151)||(18170483-18170557)
chr8 (77-151)||(18634051-18634125)
chr8 (83-149)||(22197749-22197815)
chr8 (77-147)||(24613509-24613578)
chr8 (77-130)||(4948657-4948710)
chr8 (77-150)||(13436965-13437038)
chr8 (82-151)||(25192353-25192422)
chr8 (82-151)||(29510310-29510379)
chr8 (36-140)||(31514867-31514972)
chr8 (77-136)||(2572057-2572116)
chr8 (77-140)||(8342967-8343030)
chr8 (83-142)||(8343309-8343368)
chr8 (36-71)||(22652070-22652105)
chr8 (77-151)||(5813576-5813650)
chr8 (77-151)||(20873053-20873127)
chr8 (36-69)||(11803355-11803388)
chr8 (84-159)||(21465391-21465463)
chr8 (84-148)||(22595981-22596045)
chr8 (36-128)||(34897092-34897179)
chr8 (81-137)||(41831945-41832001)
chr8 (82-137)||(18407717-18407772)
chr8 (36-71)||(24413500-24413535)
chr8 (36-67)||(27067232-27067263)
chr8 (77-128)||(28745505-28745556)
chr8 (36-71)||(37283756-37283791)
chr8 (77-147)||(31556985-31557054)
chr8 (37-70)||(3025635-3025668)
chr8 (38-71)||(13203700-13203733)
chr8 (83-128)||(30077394-30077439)
chr8 (84-136)||(17468516-17468568)
chr8 (107-151)||(24196628-24196672)
chr8 (35-71)||(29447039-29447075)
chr8 (82-142)||(31236583-31236643)
chr8 (91-151)||(36934654-36934714)
chr8 (82-126)||(40332200-40332244)
chr8 (81-149)||(44067502-44067570)
[»] scaffold0223 (1 HSPs)
scaffold0223 (36-151)||(20156-20278)
[»] scaffold0103 (1 HSPs)
scaffold0103 (84-151)||(51795-51862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (85-142)||(14523-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (83-151)||(178825-178894)
[»] scaffold0306 (1 HSPs)
scaffold0306 (77-151)||(13384-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (77-151)||(21869-21943)
[»] scaffold0007 (1 HSPs)
scaffold0007 (81-151)||(225273-225343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (84-149)||(19562-19626)
[»] scaffold0122 (1 HSPs)
scaffold0122 (77-142)||(8003-8067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (77-164)||(23740-23828)
[»] scaffold0793 (2 HSPs)
scaffold0793 (84-145)||(4891-4953)
scaffold0793 (36-71)||(4822-4857)
[»] scaffold0652 (2 HSPs)
scaffold0652 (77-151)||(463-537)
scaffold0652 (35-63)||(402-430)
[»] scaffold0053 (1 HSPs)
scaffold0053 (77-151)||(8782-8856)
[»] scaffold0311 (1 HSPs)
scaffold0311 (114-151)||(10509-10546)
[»] scaffold0004 (2 HSPs)
scaffold0004 (83-151)||(92791-92859)
scaffold0004 (36-71)||(92905-92940)
[»] scaffold0475 (1 HSPs)
scaffold0475 (36-71)||(3391-3426)
[»] scaffold0171 (1 HSPs)
scaffold0171 (65-184)||(23373-23490)
[»] scaffold0021 (1 HSPs)
scaffold0021 (82-137)||(130480-130535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (84-142)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (88-142)||(33375-33429)
[»] scaffold0036 (1 HSPs)
scaffold0036 (37-71)||(9678-9712)
[»] scaffold0003 (1 HSPs)
scaffold0003 (77-151)||(241578-241652)
[»] scaffold0450 (1 HSPs)
scaffold0450 (77-137)||(8636-8696)
[»] scaffold0136 (1 HSPs)
scaffold0136 (83-127)||(3856-3900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (77-149)||(135313-135385)


Alignment Details
Target: chr5 (Bit Score: 125; Significance: 1e-64; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 10298701 - 10298553
Alignment:
Q  3 ggtggtgagagacatgtaagtgaatcatactcttatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgt 102  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  10298701 ggtggtgagagacatgtaagtgcatcatactcctatgaagcacggacactcctcggattaggcgtgtccgatacgacaccgacacttgtaattacattgt 10298602  T
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10298601 attatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 8420121 - 8419992
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||| |||||||| ||||| || ||||||     || |||||||||||||||||||| ||||||| | |||||||||||||||| | ||||    
T  8420121 tatgaagcacggatactcctcgaattaggcgcgtccga-----caccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtc 8420027  T
Q  136 ggtgtgttagtgtccggtgtccgtgtccgcatccg 170  Q
    || |||| | ||||||||||||||||||| |||||    
T  8420026 ggcgtgtcattgtccggtgtccgtgtccgtatccg 8419992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 31084393 - 31084309
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||| | |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  31084393 cgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 42893418 - 42893353
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgt 42893353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 13287354 - 13287474
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaa-----cgacacttgtaattacattgtattatgtgactttttcaaattattagtt 130  Q
    ||||||||||  ||||||||| |||||| ||||||||| ||||||      ||||||||||| ||||| || ||||||||| |||||||||||||||  |    
T  13287354 tatgaagcacatacactcctcagattaggcgtgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatct 13287453  T
Q  131 gtgtcggtgtgttagtgtccg 151  Q
    ||||||  |||||||||||||    
T  13287454 gtgtcgacgtgttagtgtccg 13287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 6247680 - 6247609
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 10298556 - 10298510
Alignment:
Q  167 tccgcatccgtgcttcatggtcatactccctctcaaatcctcattcc 213  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  10298556 tccgcatccgtgcttcatggtcatactccctctccaatcctcattcc 10298510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 21191057 - 21191131
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||  ||| ||||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccg 21191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 14674322 - 14674253
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  14674322 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 14674253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 15405062 - 15405119
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtcagtgt 15405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 39698593 - 39698525
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||||||||||| || ||||||||| |||||||||||||||| |||||| | |||| ||||||||    
T  39698593 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccg 39698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 41995515 - 41995457
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||| |||| ||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 21576746 - 21576803
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgt 134  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||    
T  21576746 gacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 33178083 - 33178018
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| |  ||||||||| ||||| ||||||||||||||||||| ||||    
T  33178083 gacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 41633800 - 41633728
Alignment:
Q  70 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||| |||| ||||| ||||||||||| || ||||||| | |||||||||||||||| |||||||| ||||    
T  41633800 ccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgt 41633728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 3966632 - 3966597
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtcc 3966597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 5894823 - 5894897
Alignment:
Q  66 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||||||| | |||| ||||||||||| ||| |||  ||||| ||| ||||||||||||||||||||||| ||||    
T  5894823 gtgtccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtccgtgt 5894897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 21522808 - 21522734
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| ||||||||||| || ||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  21522808 gacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccg 21522734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 21533374 - 21533300
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| ||||||||||| || ||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  21533374 gacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccg 21533300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 30135372 - 30135306
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| ||  |||||||| ||||| |||||||||||||||||||| ||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgt 30135306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 7677763 - 7677702
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggt 138  Q
    |||| |||||||| ||||| || || ||||||||| |||||||||||||||| |||||||||    
T  7677763 gacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcggt 7677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 17925189 - 17925258
Alignment:
Q  93 attacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    ||||||||| ||||||||| ||| | ||||||||| ||  |||||| ||| |||||||||||||||||||    
T  17925189 attacattgaattatgtgattttcttaaattattatttaggtcggtatgtcagtgtccggtgtccgtgtc 17925258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 21542088 - 21542028
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| || ||||||| |  |||| |||||||||||||||||||    
T  21542088 gacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcgg 21542028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 22423765 - 22423871
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt-------ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    |||||||||||||||||||||||||||| |||||       |||| | |||| |||||  | |||||| |||| ||||||||| ||| ||||||||||||    
T  22423765 tatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattag 22423864  T
Q  129 ttgtgtc 135  Q
    | |||||    
T  22423865 tagtgtc 22423871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 3966561 - 3966474
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||| |||||| | |||||||| || ||| ||||| ||| ||||||||||||  |||||||  ||| ||||||| |||||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtccagtgtccgtgtccg 3966474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 14873640 - 14873605
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  14873640 tatgaagcacggacactcctcggattaggcgtgtcc 14873605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 17123165 - 17123130
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  17123165 tatgaagcacggacactcctcggattaggcgtgtcc 17123130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 21576686 - 21576721
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  21576686 tatgaagcacggacactcctcggattaggcgtgtcc 21576721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 24906253 - 24906373
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgatag--------gacaacgacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    |||||||||||||||||||||| ||||| ||||||| || |        || | ||||||||||||||||| || ||||||| | |||||||||||||||    
T  24906253 tatgaagcacggacactcctcgaattaggcgtgtcctattgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattatta 24906352  T
Q  128 gttgtgtcggtgtgttagtgt 148  Q
      ||||| || |||| |||||    
T  24906353 tctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 35017161 - 35017126
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  35017161 tatgaagcacggacactcctcggattaggcgtgtcc 35017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 4105310 - 4105241
Alignment:
Q  84 acacttgtaattacattgtattatgtgac--tttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||| || |||||||||   |||||||||||||||||| |||||| |||| ||| ||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccg 4105241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 12160005 - 12159951
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    ||||| |||||||||||||  ||||||||  ||||| ||||||||||||||||||    
T  12160005 cgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtcg 12159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 16304367 - 16304401
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    ||||||||||||||| |||||||||||||||||||    
T  16304367 tatgaagcacggacattcctcggattagacgtgtc 16304401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 18316951 - 18316989
Alignment:
Q  102 tattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  18316951 tattatgtgattttttaaaattattagttgtgtcggtgt 18316989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 19579759 - 19579685
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||||||||| || |  ||||||||| ||| |||||||||||| |||||||| || | ||||||||    
T  19579759 gacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccg 19579685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 21190998 - 21191032
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||| |||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcc 21191032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 37328845 - 37328919
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||| |||||||||| || ||| ||||| |||| ||||||||| | ||||||||||| | ||||||||    
T  37328845 gacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccg 37328919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 39698670 - 39698636
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  39698670 tatgaagcacggacactcctcggattaggcgtgtc 39698636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 43001922 - 43001888
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||| |||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtcc 43001888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 17177029 - 17177098
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||||| || ||| | ||| |||||||||||||||| ||||| || || | ||||||||    
T  17177029 cgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccg 17177098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 18421779 - 18421812
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtc 70  Q
    ||||||||| ||||||||||||||||||||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtc 18421812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 30098370 - 30098301
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtg 160  Q
    ||||||||||| ||||||||| ||| |||||||||||   || |||  |||| |||||||||||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccggtgtccgtg 30098301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 39268541 - 39268574
Alignment:
Q  38 tgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||| |||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcc 39268574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Complemental strand, 4105374 - 4105342
Alignment:
Q  39 gaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||| |||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcc 4105342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 6770575 - 6770527
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| ||| | ||||||||||||||||| |||||| ||||||||    
T  6770575 attatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccg 6770527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 19552570 - 19552618
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| |||||||||||||||  |||||||| |||| ||||||||    
T  19552570 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 19552618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 21351852 - 21351884
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgt 69  Q
    ||||||||||||||||| |||||||||||||||    
T  21351852 atgaagcacggacactcttcggattagacgtgt 21351884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 30183607 - 30183547
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||| |  | || ||||||  ||||||||||||||||||||||||    
T  30183607 gacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcgg 30183547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 43001851 - 43001807
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||||||||||| || ||||||| | ||||||||||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 170
Target Start/End: Original strand, 7801157 - 7801250
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccg 170  Q
    |||| ||||||||||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||| |||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcggtatccgtgtccgtatccg 7801250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 426479 - 426589
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||||||||||| |||||| |||||||||     || |||||||||||||||||||  ||||||||| |||||||||||||||  ||||||    
T  426479 tatgaagcacggacactcctcagattaggcgtgtccga-----caccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtc 426573  T
Q  136 ggtgtgttagtgtccg 151  Q
    || |||| ||||||||    
T  426574 ggcgtgtcagtgtccg 426589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 2117174 - 2117069
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||||||||||| |||||| | ||||||| | |||| |||||||| ||||| ||||| ||||||||| ||||||||||||||||  |||||    
T  2117174 tatgaagcacggacactcctccgattaggcatgtccgacacgaca-cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtc 2117076  T
Q  136 ggtgtgt 142  Q
    || ||||    
T  2117075 ggagtgt 2117069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 12696394 - 12696277
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    ||||||||| | ||||  |||||||||||||||| || ||||||| | |||||||||||||||| |||||||| |||| ||||||| |||| ||||||||    
T  12696394 cgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgt-cgtgtccg 12696297  T
Q  165 catccgcatccgtgcttcat 184  Q
      |||| |||||||||||||    
T  12696296 tgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 28715353 - 28715243
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt--gt-tagtgtccggtgtccgtgtccgcatccgcat 173  Q
    |||| ||||||||||||||||| || ||||||| | ||||||||||||||||  ||||| ||||  || | |||||||||||||||||||| ||||| ||    
T  28715353 gacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtccgtatcgtgtccggtgtccgtgtccgtatccgtat 28715254  T
Q  174 ccgtgcttcat 184  Q
    |||||||||||    
T  28715253 ccgtgcttcat 28715243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    ||||||||||||||||| || |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 9107371 - 9107445
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||| ||||| |||||||||||||||| |||||||| |||||||||||||    
T  9107371 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccg 9107445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 15489733 - 15489807
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||  |||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccg 15489807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 34595192 - 34595118
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| |||| | ||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccg 34595118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 10770675 - 10770748
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||| || |||| |||||||    
T  10770675 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtcc 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 16766755 - 16766682
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  16766755 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 8776981 - 8777086
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg----gtgtccg-tgtccgcatccgcatccgtg 178  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||||||||||||| |||| ||||||||    ||||||| ||||||  |||| |||||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtg 8777080  T
Q  179 cttcat 184  Q
    ||||||    
T  8777081 cttcat 8777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 16833361 - 16833294
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||||||||||| || | ||||||| ||||||||||||||||||||||||| |||| ||||||    
T  16833361 cgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 7938218 - 7938101
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc-cgata--ggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgt 132  Q
    ||||||||||||||||||||||||| || |||||| || |   ||||| |||||||| |||||||| |  ||||| ||| |||||||||||||||| |||    
T  7938218 tatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgt 7938119  T
Q  133 gtcggtgtgttagtgtcc 150  Q
    ||||| |||| |||||||    
T  7938118 gtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 8365520 - 8365594
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||||||||||||  | |||||||||  |||||||||||||||||||||||| |||| ||||||||    
T  8365520 gacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccg 8365594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 17302615 - 17302543
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||| | |||| |||||    
T  17302615 gacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 17841598 - 17841664
Alignment:
Q  85 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||||||||| |  ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  17841598 cacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 17841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 28152156 - 28152083
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| | |||||| |||| ||||||||    
T  28152156 gacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtccg 28152083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 31959212 - 31959146
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||| |||| ||| |||| |||||    
T  31959212 cgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 853860 - 853925
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||||||||| || |  ||||||||| ||||||||||||||||||||||||| ||||    
T  853860 gacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgt 853925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 7977831 - 7977896
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||| |||||||| ||||    
T  7977831 gacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgt 7977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 31384972 - 31384923
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgt 132  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  31384972 gacacttgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 1191706 - 1191761
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    ||||||||||||||||| || ||| ||||| |||||||||||||||| ||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcgg 1191761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 4878001 - 4877935
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||| | |  ||||||||||||||| ||||||||||| |||||||||||||    
T  4878001 gacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgt 4877935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 7027300 - 7027206
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccg 170  Q
    |||| |||||| | |||||||| || ||||||||| ||||| |||||||| ||  ||||||| || |||||||||| |||||||||||| |||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtccgatgtccgtgtccgtatccg 7027206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    |||||||||||||||||  ||||||||| |||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 4878060 - 4878025
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  4878060 tatgaagcacggacactcctcggattaggcgtgtcc 4878025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 7248487 - 7248452
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||| |||||||||    
T  7248487 tatgaagcacggacactcctcggatttgacgtgtcc 7248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 17327591 - 17327626
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtcc 17327626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 34225824 - 34225906
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgt-gtta--gtgtccggtgtccgtgtccgcatccg 170  Q
    |||||||| || |||||| || ||||||||||||||||||||||| ||||  |||  |||||| ||||||||||||| |||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtcagtgtccttatcgtgtccagtgtccgtgtccgtatccg 34225906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 3398676 - 3398603
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||| |||| |||||||| || ||||| ||| |||||||||||||||| |||||||| |||| ||||||||    
T  3398676 gacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtcagtgtccg 3398603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 5732475 - 5732584
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||| |||||||||||||||||| |||||||||     || |||||| | |||||||| |  | ||||||| ||| |||||||||||   |||||    
T  5732475 tatgaagcatggacactcctcggattaggcgtgtccga-----caccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T
Q  136 ggtgtgttagtgtcc 150  Q
    || |||| |||||||    
T  5732570 ggcgtgtcagtgtcc 5732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 7930363 - 7930289
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||| |||| || |  ||||||||| ||||||||||||||| |||||||||  ||| ||||||||    
T  7930363 gacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccg 7930289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 9522944 - 9522898
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||||||||||||| || ||||||||| ||||| ||||||||||    
T  9522944 cgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 9629512 - 9629478
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    ||||||||| |||||||||||||||||||||||||    
T  9629512 tatgaagcatggacactcctcggattagacgtgtc 9629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 10842651 - 10842617
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  10842651 tatgaagcacggacactcctcggattagccgtgtc 10842617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 17841530 - 17841564
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtc 17841564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 7723200 - 7723233
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt 69  Q
    |||||||||||||||||||||||||||| |||||    
T  7723200 tatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 71
Target Start/End: Original strand, 32978842 - 32978875
Alignment:
Q  38 tgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||| |||||||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcc 32978875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 33001290 - 33001355
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||| | ||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||    
T  33001290 gacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 5970120 - 5970168
Alignment:
Q  88 ttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    ||||||||||| || ||||||||| |||||||||||||||  |||||||    
T  5970120 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcg 5970168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 24115862 - 24115906
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||    
T  24115862 taattatattgaattatgtgattttttgaaattattagttgtgtc 24115906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 30866150 - 30866210
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||| | ||||||||||| ||||||||| ||| ||||||||||||  |||| |||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgt 30866210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 31385049 - 31385013
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  31385049 ttatgaagcacggacactccttggattaggcgtgtcc 31385013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 31959269 - 31959233
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||||  ||||||    
T  31959269 ttatgaagcacggacactcctcggattaggtgtgtcc 31959233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 30299047 - 30298930
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt-ccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtg 133  Q
    |||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||| || ||||||| |  |||||||||||||||| ||||    
T  30299047 tatgaagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtg 30298948  T
Q  134 tcggtgtgttagtgtccg 151  Q
    |||| |||| ||||||||    
T  30298947 tcggcgtgtcagtgtccg 30298930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 30327915 - 30327798
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt-ccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtg 133  Q
    |||||||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||| || ||||||| |  |||||||||||||||| ||||    
T  30327915 tatgaagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtg 30327816  T
Q  134 tcggtgtgttagtgtccg 151  Q
    |||| |||| ||||||||    
T  30327815 tcggcgtgtcagtgtccg 30327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 12895105 - 12895182
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||| | |||| |||||||||||||||| ||| ||||||||| |||||||||||||||| ||| |||| ||||    
T  12895105 cgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 24613702 - 24613761
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    |||| ||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcg 24613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 11596360 - 11596438
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| | ||| || || | |||||| ||||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtctggtgtccgtgtc 11596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 12797339 - 12797412
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||||| || ||| |||| ||||||||    
T  12797339 gacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccg 12797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 23292987 - 23293061
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||| | || ||||||||| |||||||||||||||| |||||||| |||| | ||||||    
T  23292987 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccg 23293061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 24544035 - 24543957
Alignment:
Q  82 cgacacttgtaattacattgtattatgtg-actttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgt 159  Q
    ||||||||||||||||| || |||| ||| | ||||| ||||||||||||||||||| |||| |||||| |||||||||    
T  24544035 cgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtctggtgtccgt 24543957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 54580024 - 54580082
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| |||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 19482719 - 19482654
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||||||||||||||  | |||||||||  |||||||||||||||||||||||| |||| ||||||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 40481687 - 40481623
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  40481687 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 3947755 - 3947827
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    ||||||||| | ||||  |||||||||||||||| || |||||| || |||||||||||||||| ||||||||    
T  3947755 cgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcgg 3947827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 21945561 - 21945501
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||| ||||||||    
T  21945561 gacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcgg 21945501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 715615 - 715677
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttc-aaattattagttgtgtcggtgtgttag 145  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| ||||||||||||||||    
T  715615 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 715677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 752941 - 753003
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttc-aaattattagttgtgtcggtgtgttag 145  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| ||||||||||||||||    
T  752941 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 4157207 - 4157112
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt---tagtgtccggtgtccgtgtccgcatccg 170  Q
    |||| |||||||||||||| || |  ||||||||| ||||||||||||||||||||||| |||| |   | ||||| |||||||||||||| |||||    
T  4157207 gacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccg 4157112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 14126118 - 14126184
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||   ||||||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtc 14126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 29205497 - 29205451
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  29205497 cgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 35157986 - 35158060
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||| |||||||| |  ||||||||| |||| |||||||||||||| ||||| |||| ||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccg 35158060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 2361976 - 2362041
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||| |||||||| |  ||||||| | |||||||||||||||| |||||||||||||    
T  2361976 gacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgt 2362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 14465088 - 14465133
Alignment:
Q  89 tgtaattacattgtattatgtgactttttcaaattattagttgtgt 134  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 28964255 - 28964300
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 32273553 - 32273633
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttcat 184  Q
    ||||||| | |||||||||||||||||||||| || |||| | ||||||||||| ||||||  ||||| || ||||||||||    
T  32273553 attatgttattttttcaaattattagttgtgttggcgtgtca-tgtccggtgtctgtgtccatatccgtattcgtgcttcat 32273633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 4383419 - 4383352
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||| |||  |||| ||||||||    
T  4383419 gacatttgtaattacactgaattatgtga-tttttcaaattattagttgtatcgacgtgtcagtgtccg 4383352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 4383484 - 4383448
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccg 72  Q
    |||||||||||||||||||||||||||| ||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtccg 4383448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 11110708 - 11110768
Alignment:
Q  102 tattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    ||||||||||  |||||||||||||  ||||||||| ||||  ||||||||||||||||||    
T  11110708 tattatgtgatattttcaaattattccttgtgtcggcgtgtctgtgtccggtgtccgtgtc 11110768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 12884348 - 12884380
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtg 68  Q
    |||||||||||||||||||||||||||||||||    
T  12884348 tatgaagcacggacactcctcggattagacgtg 12884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 16073452 - 16073373
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtcc 157  Q
    |||| ||||||||||||||||| || |||||| || ||||||||||||||| |||||| || |||| || |||| ||||||    
T  16073452 gacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgttggcgtgtcagagtccagtgtcc 16073373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 20633536 - 20633469
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||||||||| |||||||   ||||||||||||||||  ||||||  |||| ||||||||    
T  20633536 acgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccg 20633469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 28084574 - 28084514
Alignment:
Q  83 gacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||||||||||||| |||||||||  ||||||||||| |||| |||||||| ||||    
T  28084574 gacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgt 28084514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 31800484 - 31800544
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||||||  ||||| | | ||||| |||||||||| |||||||||||||    
T  31800484 cgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgt 31800544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 34306805 - 34306864
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| |  ||||| ||| |||||||||||||||||||||||||    
T  34306805 gacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcgg 34306864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 715546 - 715581
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  715546 tatgaagcacggacactcctcggattaggcgtgtcc 715581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 752872 - 752907
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  752872 tatgaagcacggacactcctcggattaggcgtgtcc 752907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 824217 - 824252
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||| ||||||||||||||||||||    
T  824217 tatgaagcacggacagtcctcggattagacgtgtcc 824252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 5775305 - 5775340
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  5775305 tatgaagcacggacactcctcggattaggcgtgtcc 5775340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 14465006 - 14465041
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||| ||||||||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcc 14465041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 22440559 - 22440651
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtccga---taggacaacgacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    ||||||||||||||||||||||||||| ||||||| |   | |||| ||| ||| | |||||||| || ||||||||| ||| |||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggac-acgtcacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 23292927 - 23292962
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcc 23292962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 24613631 - 24613666
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||| |||||||||||||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcc 24613666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 35239237 - 35239202
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35239237 tatgaggcacggacactcctcggattagacgtgtcc 35239202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 37203370 - 37203335
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37203370 tatgaagcacggacacttctcggattagacgtgtcc 37203335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 38847019 - 38847078
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||| || || || ||| |||||||||||||||| |||||||| ||||    
T  38847019 gacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgt 38847078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 49431084 - 49431009
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||| |||||||| || ||||||||| ||||| ||||||||||| |||||||| |||| | ||||||    
T  49431084 gacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccg 49431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 3064869 - 3064903
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  3064869 tatgaagcacggacactcctcggattaggcgtgtc 3064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 73
Target Start/End: Original strand, 17210039 - 17210069
Alignment:
Q  43 cacggacactcctcggattagacgtgtccga 73  Q
    |||||||||||||||||||||||||||||||    
T  17210039 cacggacactcctcggattagacgtgtccga 17210069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 27706185 - 27706251
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    ||||||||||||||| |  ||||||||| ||||| ||||||||| ||||||||  |||| |||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtcc 27706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 6485617 - 6485662
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||||    
T  6485617 cgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 12895275 - 12895340
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||| ||||||||    ||||||||| ||||||||||||||| ||||||||| ||||    
T  12895275 gacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgt 12895340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 18844424 - 18844461
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccga 73  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  18844424 tatgaagcacggacacttctcggattaggcgtgtccga 18844461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 28084640 - 28084607
Alignment:
Q  38 tgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||| |||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcc 28084607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 37203315 - 37203239
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtcc 163  Q
    ||||||||||||||| |  ||||||| | ||||||||||||||||  ||||| |||   | |||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagccgtgtctgtg---tcgtgtccggtgtccgtgtcc 37203239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 3947701 - 3947729
Alignment:
Q  35 ttatgaagcacggacactcctcggattag 63  Q
    |||||||||||||||||||||||||||||    
T  3947701 ttatgaagcacggacactcctcggattag 3947729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 36635368 - 36635308
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||| || ||||||||| ||| ||||||||||||| |||| || |||| ||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccg 36635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 51701309 - 51701253
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    ||||||||||||||| |  ||||||| | |||||||||||||||| |||||| ||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgtccgtgt 51701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 9408328 - 9408420
Alignment:
Q  70 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    |||||| |||| ||||||||||||||||| |  ||||||||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  9408328 ccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctggtgtccgtgtc 9408420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 3991431 - 3991318
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc-----gataggacaac---gacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    |||||||| ||||||||||||||||||| |||||||     |||| ||| ||   |||||||||||||| | || ||||||||| |||||||||||||||    
T  3991431 tatgaagcccggacactcctcggattaggcgtgtcccagtcgatacgacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatta 3991332  T
Q  128 gttgtgtcggtgtg 141  Q
    ||||||||||||||    
T  3991331 gttgtgtcggtgtg 3991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 35862069 - 35861951
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgatag------gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagt 129  Q
    |||||||||||||||||||||||||||| |||||||    |      ||||  |||||||  |||||||||| ||||||||| |||||||||||||||||    
T  35862069 tatgaagcacggacactcctcggattaggcgtgtcctcgtgtccgacgacacagacacttacaattacattgaattatgtgattttttcaaattattagt 35861970  T
Q  130 tgtgtcggtgtgttagtgt 148  Q
    |||||||| ||||||||||    
T  35861969 tgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 11061077 - 11061151
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||| | |  ||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccg 11061151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 18215187 - 18215261
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||||||| |||| || ||||||||| |||||||||||||||| || ||||| |||||||||||||    
T  18215187 gacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccg 18215261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 24105731 - 24105631
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgctt 181  Q
    ||||||||||||||||| || || |||  | |||||||||||||||| |||||||| |||| ||||||| |||| |||||||| ||||| ||||||||||    
T  24105731 cgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgt-cgtgtccgtatccgtatccgtgctt 24105634  T
Q  182 cat 184  Q
    |||    
T  24105633 cat 24105631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 27945136 - 27945025
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||||||||||||  |||| |||| |    | |||| ||||||||||||||||| || ||||||| | ||| ||||||||||||| |||||    
T  27945136 tatgaagcacggacactcctcgagttaggcgtgac----acgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtc 27945041  T
Q  136 ggtgtgttagtgtccg 151  Q
    || |||| ||||||||    
T  27945040 ggcgtgtcagtgtccg 27945025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 151
Target Start/End: Complemental strand, 13770760 - 13770675
Alignment:
Q  66 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||| | |||||||||||||||||||||| || ||||||| | ||||| |||||||||| |||||||| || | ||||||||    
T  13770760 gtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccg 13770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 24339700 - 24339635
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  24339700 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 24339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 7438764 - 7438704
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcgg 7438704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 9778569 - 9778462
Alignment:
Q  66 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt--gt-tagtgtccggtgtccgtgtc 162  Q
    |||||||| | |||| ||||||||||||||| | || ||||||||| ||||||||||||| || |||||| ||||  || | ||||||||||||||||||    
T  9778569 gtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtcagtgtccgtgtcgtgtccggtgtccgtgtc 9778470  T
Q  163 cgcatccg 170  Q
    || |||||    
T  9778469 cgtatccg 9778462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 25481953 - 25481895
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 5409825 - 5409910
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    ||||||||| | |||| |||||||||||||| || || ||||||||| |||||||||||||||| ||| || | |||| |||||||    
T  5409825 cgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 8234196 - 8234139
Alignment:
Q  85 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||| |||| || ||||||| | ||||||||||||||||||||||||||||||    
T  8234196 cacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgt 8234139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 32094009 - 32094093
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    ||||||||| | |||| ||||| ||||||||||| || |||||||||  |||||||||||||||||||||| ||  |||||||||    
T  32094009 cgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgt 32094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 43027470 - 43027576
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtcc-gcatccgcatcc 175  Q
    |||| ||||||||||| ||||| || ||||||||| |||||||||||||||| || ||||  |||| |||||||| |||| |||||| |  |||||||||    
T  43027470 gacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccg-tgtc-gtgtccagtgtccgcatcc 43027567  T
Q  176 gtgcttcat 184  Q
    |||||||||    
T  43027568 gtgcttcat 43027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 1433577 - 1433542
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  1433577 tatgaagcacggacactcctcggattagacgtgtcc 1433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 11665441 - 11665528
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||| |||||||| |||||| | || ||||||||| ||||||||||||||||||||||| | |||| | | ||| |||||||| ||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtcaatatccagtgtccgtatccg 11665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 18035804 - 18035839
Alignment:
Q  34 cttatgaagcacggacactcctcggattagacgtgt 69  Q
    ||||||||||||||||||||||||||||||||||||    
T  18035804 cttatgaagcacggacactcctcggattagacgtgt 18035839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 33994270 - 33994199
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    |||| |||||||||||||| || || |||||||||| ||||||||||| |||||| ||||| |||| |||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 11831481 - 11831404
Alignment:
Q  86 acttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    ||||||||||||| |  ||||| ||| |||||||||||||||||||||||| |||| | |||||| |||||||| ||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtg-tcgtgtccagtgtccgtatccg 11831404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 26033467 - 26033513
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  26033467 cgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 7197298 - 7197363
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||||||||||||||| ||||  ||| ||||| |||||||||| |||||||| ||||    
T  7197298 gacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgt 7197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 6630913 - 6630985
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| |||||| | |||||||| || |||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  6630913 gacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 25822720 - 25822648
Alignment:
Q  70 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||| |||| ||||||||||||||||| || ||| ||    ||||||||||||||||||||||||| ||||    
T  25822720 ccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgt 25822648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 5409772 - 5409807
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcc 5409807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 11272587 - 11272649
Alignment:
Q  77 gacaacgacacttgtaattacattgtattat--gtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| || |||||  |||| ||||||||||||| |||||||||||    
T  11272587 gacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcgg 11272649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 29763130 - 29763165
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  29763130 tatgaagcacggacactcctcggattaggcgtgtcc 29763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 40131940 - 40131975
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||| |||||||||||||||||||||||||    
T  40131940 tatgaagcacagacactcctcggattagacgtgtcc 40131975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 15680927 - 15680893
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||| ||||||||||||    
T  15680927 tatgaagcacggacactcctcgaattagacgtgtc 15680893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 29763201 - 29763247
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||| ||||||||||||| |||||||| ||||||| ||||||    
T  29763201 attatgtgattttttcaaattataagttgtgttggtgtgtcagtgtc 29763247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 43250047 - 43249977
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| |||||||| |||||||||| | ||| |||||||||||   ||||||| |||| ||||||||    
T  43250047 acgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccg 43249977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 2334378 - 2334345
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt 69  Q
    |||||| |||||||||||||||||||||||||||    
T  2334378 tatgaaacacggacactcctcggattagacgtgt 2334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 21826304 - 21826259
Alignment:
Q  104 ttatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  21826304 ttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtc 21826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 30813915 - 30813882
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt 69  Q
    |||||||||||||||||||||||||||| |||||    
T  30813915 tatgaagcacggacactcctcggattaggcgtgt 30813882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 7058477 - 7058429
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgt 132  Q
    ||||||||||||||| || ||||  ||| ||||||||||||||||||||    
T  7058477 acacttgtaattacactgaattacatgattttttcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 10042969 - 10042921
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| ||| ||||||||||||| ||||||| |||| ||||||||    
T  10042969 attatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccg 10042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 21560568 - 21560484
Alignment:
Q  70 ccgataggacaacgacacttgtaattacattgtattatgtgacttt-----ttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||||| |||| ||||||||||||||||| || ||||||||| |||     ||||||||||||| ||| |||| |||| ||||||    
T  21560568 ccgatacgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtgtc 21560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 29787384 - 29787444
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||| || ||||||||| ||| ||||||||||||  ||||||| |||||| ||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccg 29787444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 40287363 - 40287422
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||||||||||| || || || ||| |||||||||||||| |||||||||| ||||    
T  40287363 cgacacttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgt 40287422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaa 121  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 32434723 - 32434798
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggt-gtgttagtgtccggtgtcc 157  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  32434723 gacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccggtgtcc 32434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 22881568 - 22881689
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgatag--------gacaacgacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    ||||||||||||||||||||||||||||||||||||    |        |||| ||||||||||||||||| |  ||||||||| |||||||||||||||    
T  22881568 tatgaagcacggacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22881667  T
Q  128 gttgtgtcggtgtgttagtgtc 149  Q
    |||||||||| |||| ||||||    
T  22881668 gttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 38078662 - 38078769
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatcc 175  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||  |||| ||||| | |||||| |||||||  |||| ||||    
T  38078662 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttc-gtgtccggtgtccgtgtccgtatcc 38078760  T
Q  176 gtgcttcat 184  Q
    |||||||||    
T  38078761 gtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 37598889 - 37598803
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||| |||||||| |||||||| || ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  37598889 gacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccggtgtctgtgtccg 37598803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 48450551 - 48450662
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||||||||||||||||||||||||||  |  | |  ||||||||||||||||| |  ||||||| | |||||||||||||||| |||||     
T  48450551 tatgaagcacggacactcctcggattagacgtgtcc--tgtgtc--cgacacttgtaattacactaaattatgttattttttcaaattattagctgtgtt 48450646  T
Q  136 ggtgtgttagtgtccg 151  Q
    || |||| ||||||||    
T  48450647 ggcgtgtcagtgtccg 48450662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 31672896 - 31672979
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtg 160  Q
    |||| ||| ||||||||||||| || |||| |||| |||||||||||||||| ||||||||||||| ||||||| || ||||||    
T  31672896 gacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcccgtatccgtg 31672979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 40258934 - 40258997
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgt 40258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 1704993 - 1705067
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||  || ||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  1704993 gacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccg 1705067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 169
Target Start/End: Original strand, 24334665 - 24334799
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatg-tgactttttcaaattattagttgtgt 134  Q
    ||||||||||||||||| || ||||||| |||| |   |  |||| ||||||||||||||||| || ||||||     |||||||||| ||||| |||||    
T  24334665 tatgaagcacggacactacttggattaggcgtgacgtgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgt 24334764  T
Q  135 cggtgtgttagtgtccggtgtccgtgtccgcatcc 169  Q
    ||||||||  |||||||||||||||||||| ||||    
T  24334765 cggtgtgtccgtgtccggtgtccgtgtccgtatcc 24334799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 24577187 - 24577245
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  24577187 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 28273083 - 28273147
Alignment:
Q  71 cgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||||||||| ||||||||||||||||| || ||||| ||| |||||||||| ||||||||||||    
T  28273083 cgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtc 28273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 1815316 - 1815241
Alignment:
Q  76 ggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||| ||||||||||||||||| || ||||||||| ||||| |||| |||| ||||||||| |||| ||||||||    
T  1815316 ggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 1815241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 46348384 - 46348470
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||| ||||||||||||||||| |  ||||| ||| |||||||||||||||| |||||||| |||| ||||||| |||||||| ||||    
T  46348384 gacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 46348470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 113350 - 113292
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 1486698 - 1486768
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||| | |||| |||||||| |||||||| || ||||||||| |||||||||||||||| ||||||    
T  1486698 cgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtc 1486768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 18556466 - 18556543
Alignment:
Q  86 acttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||||||||||||||  |||||||||  ||||||||||||||| |||||||| |||| ||||||| |||||||| ||||    
T  18556466 acttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 18556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 32461471 - 32461529
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||| ||| ||||    
T  32461471 acacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgt 32461529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 35702543 - 35702649
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgatag-----gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagtt 130  Q
    |||||||||||||||||||||||||||| ||||||| || |     ||||  |||||||||||||||| |  ||||| |||  ||||||||||||||| |    
T  35702543 tatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagct 35702642  T
Q  131 gtgtcgg 137  Q
    |||||||    
T  35702643 gtgtcgg 35702649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 42359450 - 42359524
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||| ||||| |||||||||||||||| |||||| | |||| ||||||||    
T  42359450 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccg 42359524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 398780 - 398878
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg----gtgtcc-gtgtccgcatccgcatccgtgcttcat 184  Q
    |||||||| || ||||||||| ||||||||||||||||  ||||||| |||| ||||||||    |||||| |||||||| |||| |||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcat 398878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 184
Target Start/End: Original strand, 3490347 - 3490497
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtccga---taggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttg 131  Q
    |||| ||||||||||||| ||||||||||| |||||| |   | ||||| ||||||||||||||||| || || ||||   ||| ||||||||||||  |    
T  3490347 ttataaagcacggacacttctcggattagatgtgtcccaatgtcggaca-cgacacttgtaattacactgaataatgtagttttctcaaattattagcag 3490445  T
Q  132 tgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatccgtgcttcat 184  Q
    |||||| |||| ||||||  |||||| ||||| | ||||| |||||||||||||    
T  3490446 tgtcggcgtgtcagtgtc--gtgtccggtgtctgtatccgtatccgtgcttcat 3490497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 21378631 - 21378571
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||||||||||| || ||||||| | |||||||| ||||||| |||||||||||||    
T  21378631 cgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgt 21378571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 47989555 - 47989484
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| ||||||||||||||||| || ||||||||| ||||| ||||||||| ||||||||| |||| ||||||    
T  47989555 gacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 6332728 - 6332666
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||| ||| ||||||||||||| || ||||||||| ||||||||||||||||||||||| ||||    
T  6332728 gacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgtccgtgt 6332666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 9828173 - 9828138
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcc 9828138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 18190109 - 18190167
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||| ||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 22515888 - 22515946
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| ||||||    
T  22515888 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 18337387 - 18337338
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattatt 126  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 38503385 - 38503304
Alignment:
Q  70 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||| |||||| | |||||||| || | ||| ||| ||| ||||||||||||  |||||||||||||||||||||    
T  38503385 ccgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccg 38503304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 51410083 - 51410022
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| || |||||||||  |||||||||||||||| ||||||||    
T  51410083 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcgg 51410022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 30359483 - 30359374
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||||||||||| |||| | |||||||  | |     ||||||||| | ||||| |  ||||||||| ||||||||||||| ||||||| |    
T  30359483 tatgaagcacggacactcctcagatttggcgtgtcccgttgt----cgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgcc 30359388  T
Q  136 ggtgtgttagtgtc 149  Q
    ||||||| ||||||    
T  30359387 ggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 31015096 - 31015044
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgt 134  Q
    ||||||||||||||||| || ||||||||| ||| |||||||||||| |||||    
T  31015096 cgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 34298480 - 34298420
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||| || ||||||||| ||| ||||||||||||| |||||||||||| ||| ||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccg 34298420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 71
Target Start/End: Original strand, 5898211 - 5898242
Alignment:
Q  40 aagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcc 5898242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 6427516 - 6427459
Alignment:
Q  83 gacacttgtaattacattgtattatgtgacttttt---caaattattagttgtgtcgg 137  Q
    |||||||||| |||||||| ||||||||| |||||   ||||||||||||||||||||    
T  6427516 gacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcgg 6427459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 14359529 - 14359587
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||| |||||||| ||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgt 14359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 22947848 - 22947813
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  22947848 tatgaagcacggacactcctcggattaggcgtgtcc 22947813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 37598949 - 37598914
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  37598949 tatgaagcacggacactcctcggattaggcgtgtcc 37598914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 47989626 - 47989591
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  47989626 tatgaagcacggacactcctcggattaggcgtgtcc 47989591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 2288182 - 2288240
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||||| ||||||||| ||| | ||||||||| |  ||||||||||||||||||    
T  2288182 taattacattgaattatgtgattttcttaaattattattgttgtcggtgtgttagtgtc 2288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 5376501 - 5376575
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||| |||||||| || ||||||| | ||| | ||||||||||  ||||||| |||||||||||||    
T  5376501 gacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccg 5376575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 6612172 - 6612222
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||    
T  6612172 gacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 16297223 - 16297257
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||| |||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcc 16297257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 21365993 - 21366027
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  21365993 tatgaagcacggacactcctcggattaggcgtgtc 21366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 22515828 - 22515862
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  22515828 tatgaagcacggacactcctcggattaggcgtgtc 22515862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 42359391 - 42359425
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||| |||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcc 42359425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 5927347 - 5927392
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  5927347 gacacttgtaattacattaaattatatgattttttcaaattattag 5927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 9828087 - 9828019
Alignment:
Q  92 aattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgt 161  Q
    ||||||| || ||||||||| ||| ||||||||||||| ||||||| ||| | |||||||||||| ||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgtg-tcgtgtccggtgtctgtgt 9828019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 19058857 - 19058922
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| || ||||||| |  |||| |||||||||| |||||||| ||||    
T  19058857 gacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 35919265 - 35919370
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgacttttt-----caaattattagttgtgtcggtgtgttagtgtccg-gtgtccg 158  Q
    ||||||||| | ||||  ||||||| |||||||| || ||||||||| |||||     ||||||||||| |||||||| ||||| ||||||| ||||| |    
T  35919265 cgtgtccgacacgacacggacacttataattacactgaattatgtgattttttttcttcaaattattagatgtgtcggagtgttggtgtccgtgtgtcag 35919364  T
Q  159 tgtccg 164  Q
    ||||||    
T  35919365 tgtccg 35919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 36878519 - 36878427
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccg 170  Q
    |||| |||||| | |||||||| || ||||||||| ||| ||||||||||||  ||||||| |||| ||||| |  |||||||||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt-ctatgtccgtgtccgtatccg 36878427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 2283717 - 2283669
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgt 132  Q
    |||||| ||||||||||| || |||||| ||||||||||||| ||||||    
T  2283717 acacttataattacattgaatcatgtgattttttcaaattataagttgt 2283669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 6427394 - 6427334
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||| ||||||||| ||| ||||||||||||  |||| || |||| ||||||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 6427334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 9103672 - 9103624
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| |||||||||||||||  |||||||| |||| ||||||||    
T  9103672 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 16812575 - 16812527
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| ||| ||||||||||| | |||||||||||| ||||||||    
T  16812575 attatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccg 16812527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 17778604 - 17778549
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| ||||||||||||||||| |||||   |||| |||||||||||||||| ||||||    
T  17778604 gacaccgacacttgtaattacactgtat---gtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 40258873 - 40258909
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||| |||||||||||||||||| |||||||    
T  40258873 ttatgaagcatggacactcctcggattaggcgtgtcc 40258909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 19536362 - 19536473
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttt-tcaaattattagttgtgt 134  Q
    ||||||||| |||||||||||||||||| |||||||||     || ||||||||||||||||| || ||||||||| |||| ||||||||||||||||||    
T  19536362 tatgaagcatggacactcctcggattaggcgtgtccga-----caccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 19536456  T
Q  135 cggtgtgttagtgtccg 151  Q
    ||| |||| | ||||||    
T  19536457 cggcgtgtcattgtccg 19536473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 21374706 - 21374807
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatccgtgctt 181  Q
    |||||||||||||||| || ||||||| | |||||||||||||||| |||||||| |||||||||||| |||||| |||||||  |||| ||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtcc-gtgtccggtgtccgtgtccgtatccgtgctt 21374804  T
Q  182 cat 184  Q
    |||    
T  21374805 cat 21374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 151
Target Start/End: Original strand, 20539633 - 20539749
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc-cgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgt 134  Q
    ||||||||||||||||||||||||| || |||||| ||  | |||| ||||||||||||||||| |  ||||| ||| |||||||||||||||| |||||    
T  20539633 tatgaagcacggacactcctcggatcaggcgtgtctcgccacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgt 20539732  T
Q  135 cggtgtgttagtgtccg 151  Q
    ||  |||| ||||||||    
T  20539733 cgacgtgtcagtgtccg 20539749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 37559035 - 37558949
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||| |||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||| |||| ||||||| |||||||| ||||    
T  37559035 gacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 37558949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 15657922 - 15657848
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| ||||||||||| || ||||||||| |||| |||||||||||||| ||||| |||||||||||||    
T  15657922 gacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccg 15657848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 18255945 - 18256046
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||||||||||||||||||| ||||||| |||||||     |||| |||||||| ||||||||||  ||||||||| ||||| |||||||||  ||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtcc-----gacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtc 18256039  T
Q  136 ggtgtgt 142  Q
     ||||||    
T  18256040 agtgtgt 18256046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 30717531 - 30717605
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| | ||||||| ||| ||||||||    
T  30717531 gacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccg 30717605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 15972931 - 15972857
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||| ||| | ||||||||||||||| ||||||||| |||| ||||||||    
T  15972931 gacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccg 15972857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 18422021 - 18421947
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || |||||||||  |||| ||||||||| ||||||||| |||| ||||||||    
T  18422021 gacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccg 18421947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 24894486 - 24894363
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||||||||||| ||||||| | |||||  |||||||| | || | | |||||| ||||| || || ||||||||| ||||| |||||||||| ||||||    
T  24894486 tatgaagcacgggcactccttgaattag--gtgtccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtc 24894389  T
Q  136 ggtgtgttagtgtccg-gtgtccgtg 160  Q
    || |||| |||||||| |||||||||    
T  24894388 ggcgtgtcagtgtccgtgtgtccgtg 24894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 30335475 - 30335401
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| ||||||||||| |  ||||||| | ||||||||||||||||||||||||| ||| |||||||||    
T  30335475 gacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccg 30335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 6940308 - 6940239
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||||| |  ||||||| ||||||| |||||||||| |||||||| |||| ||||||||    
T  6940308 cgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccg 6940239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 18841014 - 18841087
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||| ||||||||||||||||| |  ||||||| | ||||||||||||||||||||||| | |||| |||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 23718079 - 23718010
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||| | |||||||| || ||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccg 23718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 24105751 - 24105682
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||| | |||||||| || ||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccg 24105682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 30404856 - 30404925
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||   ||||||| |||| ||||||||    
T  30404856 cgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccg 30404925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 20473380 - 20473320
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| || ||||| ||| ||||| |||||||||||||||||||    
T  20473380 gacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcgg 20473320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 974805 - 974746
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    |||| ||||||||||||||||| || || ||||||  |||||||||||||||||||||||    
T  974805 gacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 37419793 - 37419714
Alignment:
Q  85 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||||||||||||| || ||| ||||| |||||||||||||| |   |||||| |||| |||||||||||||||| ||||    
T  37419793 cacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccggtgtccgtatccg 37419714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 2438720 - 2438778
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| ||||||||||||||||| || ||||||||| ||||| |||||||||| ||||||    
T  2438720 gacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 26769569 - 26769471
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt-----tagtgtccggtgtccgtgtccgcatccg 170  Q
    |||| |||||||||||||||||    || ||||||  |||||||||||||||||||||||| ||||     | |||||||||||||||||||| |||||    
T  26769569 gacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtcgtgtccggtgtccgtgtccgtatccg 26769471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 12668424 - 12668489
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||| |||||||| || ||||||| | |||||||||||||||||| |||||| ||||    
T  12668424 gacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 12940941 - 12940994
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||| ||||||||||| || ||||| ||| |||||||||||||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtc 12940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 34691769 - 34691857
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||| ||||||||||||||||||||| |||||||||     || |||||| | |||||||| || ||||| ||| ||| ||||||||||||    
T  34691769 ttatgaaacacggacactcctcggattaggcgtgtccga-----caccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 34714181 - 34714269
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||| ||||||||||||||||||||| |||||||||     || |||||| | |||||||| || ||||| ||| ||| ||||||||||||    
T  34714181 ttatgaaacacggacactcctcggattaggcgtgtccga-----caccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 38117167 - 38117232
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||||||||||||||  | | ||||||| |||||||||||||||| |||||||| |||| ||||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 36756345 - 36756417
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| |||||||| |||||||| || ||||||| | || |||||||||||||||||||||  |||| ||||||    
T  36756345 gacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtc 36756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 5040792 - 5040730
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtga--ctttttcaaattattagttgtgtcgg 137  Q
    |||| |||||||||||||||||||| |||||||||   |||||||||||||||| ||| ||||    
T  5040792 gacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcgg 5040730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 14996213 - 14996330
Alignment:
Q  66 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttt-tcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||||||| | |||| ||||||||||||||||| |  ||||| ||| |||| |||||||||||| ||||||||  ||| ||||||| |||| | |||| |    
T  14996213 gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtcc-gtgt-catgtctg 14996310  T
Q  165 catccgcatccgtgcttcat 184  Q
    | |||| |||||||||||||    
T  14996311 cgtccgtatccgtgcttcat 14996330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 23058443 - 23058518
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || |||||||||  ||||||||||||||| |||||| || |||| | ||||||    
T  23058443 gacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccg 23058518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 26769640 - 26769605
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcc 26769605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 37419872 - 37419837
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcc 37419837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 42511323 - 42511358
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 2438661 - 2438695
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||| |||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcc 2438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 11223864 - 11223922
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||| ||||||||||||||||| || ||||||| | ||||||||| |||||| ||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 28596587 - 28596550
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccga 73  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccga 28596550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 29176501 - 29176566
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||||| |||||||| || |||||||||| ||||||||||||||  |||||| | |||| ||||||    
T  29176501 acacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgtc 29176566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 21091775 - 21091707
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||||||||||| || | ||||| | ||| | ||||||||||  |||||||||||| ||||||||    
T  21091775 gacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccg 21091707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 17749 - 17835
Alignment:
Q  76 ggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    ||||| ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||| | |||||| |||||| ||||||||||    
T  17749 ggacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccgatgtccgtgtc 17835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 184
Target Start/End: Complemental strand, 46775 - 46628
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||||||||||||||||||||||||||| ||||||      |||| ||||| ||||||||||| || ||||||||| |||||||||||||||  ||||||    
T  46775 tatgaagcacggacactcctcggattaggcgtgtc------gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtc 46682  T
Q  136 ggtgtgttagtgtccg----gtgtccg-tgtccgcatccgcatccgtgcttcat 184  Q
    || |||| | ||||||    ||||||| ||||||  |||| |||||||||||||    
T  46681 ggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcat 46628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 25948848 - 25948939
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    |||||||||||||| |||| |||||| |||||||||| | |||| | |||||| |||||||| || ||||||||| ||||||||||||||||    
T  25948848 atgaagcacggacattccttggattacacgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 70 - 164
Target Start/End: Complemental strand, 34910382 - 34910289
Alignment:
Q  70 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||||| |||| |||| |||||||||||| || ||||||||| ||||||||||||||||||||||||| ||| | ||||| ||||||||| ||||    
T  34910382 ccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtg-tcgtgtctggtgtccgtatccg 34910289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 10955010 - 10954939
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    |||| |||||||||| |||||| || ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  10955010 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 10335287 - 10335361
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||| ||||| |  | ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  10335287 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccg 10335361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 21256952 - 21257045
Alignment:
Q  39 gaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    |||||||||||||||||||||||||  ||||||   | || | ||||||||||||||| | || ||||||||| |||||||||||||||| ||||||    
T  21256952 gaagcacggacactcctcggattaggtgtgtcc---acgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 55401133 - 55401059
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||| || | ||||||||    
T  55401133 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccg 55401059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 4987299 - 4987363
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 14209165 - 14209106
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||| || ||||||||| ||||| ||||||||||||||||||| ||||    
T  14209165 gacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 20503518 - 20503451
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||||||||||| || ||||||| | |||||||||||||| |||||||||| |||| ||||||    
T  20503518 cgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 8587022 - 8587096
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||| ||| |||||||| |||| ||||||||    
T  8587022 gacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccg 8587096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 25775567 - 25775481
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgact-ttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    |||| ||||||||||||||||| || ||||||||| | ||||||||||||||  ||||| || |||| ||||||| |||||||||||    
T  25775567 gacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtccagtgtccgtgtc 25775481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 28918059 - 28917985
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| | |||||| |||| ||| ||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccg 28917985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 14216944 - 14216845
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttc 182  Q
    |||||||||||||||| || ||||| |||  |||| ||||||||||||||||||  |||| ||||||| |||| |||||| |  ||||||||||||||||    
T  14216944 gacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc-gtgt-cgtgtctgtgtccgcatccgtgcttc 14216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 14223073 - 14222974
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttc 182  Q
    |||||||||||||||| || ||||| |||  |||| ||||||||||||||||||  |||| ||||||| |||| |||||| |  ||||||||||||||||    
T  14223073 gacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc-gtgt-cgtgtctgtgtccgcatccgtgcttc 14222976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 21479176 - 21479079
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt-----tagtgtccggtgtccgtgtccgcatcc 169  Q
    |||| ||||||| ||||||||| || ||| ||||| |||||||||||||||| |||||||| ||||     | |||||||||||||||||||| ||||    
T  21479176 gacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtccgtatcc 21479079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 26508163 - 26508110
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 135  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||| ||||||    
T  26508163 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 26508110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 28812573 - 28812508
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||||||| |||| || ||||||||| || |||||||||||||||||||||| ||||    
T  28812573 gacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 39756294 - 39756188
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccg-tgtccgcatccgcatcc 175  Q
    |||| ||||||||||||||| |||  ||||||||| ||||| ||||||||| || |||||| |||| ||||||  ||||||| |||||| ||||  ||||    
T  39756294 gacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc--gtgtccgatgtccgtatccatatcc 39756197  T
Q  176 gtgcttcat 184  Q
    |||||||||    
T  39756196 gtgcttcat 39756188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 49651778 - 49651847
Alignment:
Q  68 gtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||||| | |||| ||||||||||||||||| || ||||||||| ||||||||||||||||  |||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcgg 49651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 7928536 - 7928445
Alignment:
Q  44 acggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    ||||||||||||| |||||| |||||||||     || |||||| | |||||||| || ||||||||| ||||||||||||||||  ||||||||||    
T  7928536 acggacactcctcagattaggcgtgtccga-----caccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt 7928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 10318064 - 10318119
Alignment:
Q  106 atgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||    
T  10318064 atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtgtc 10318119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 14747610 - 14747513
Alignment:
Q  87 cttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatccgtgcttcat 184  Q
    |||||||||||| |  ||||||||| ||||| ||||||||||| |||||||| |||| ||||||  |||||| ||||||| ||||| |||||||||||||    
T  14747610 cttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc--gtgtccggtgtccgtatccgtatccgtgcttcat 14747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 14829747 - 14829676
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| ||||||||||||||||  || ||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  14829747 gacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 16000017 - 16000089
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| ||||||||||| ||||| || ||||||| | ||||| ||||||||||||||||||| |||| ||||||    
T  16000017 gacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 21305290 - 21305218
Alignment:
Q  91 taattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 162  Q
    ||||||||||  ||||||||| ||||| |||||||||||  ||||||| ||||||||||| ||||||||||||    
T  21305290 taattacatttaattatgtgatttttttcaaattattagaggtgtcggcgtgttagtgtctggtgtccgtgtc 21305218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 35994743 - 35994798
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||    
T  35994743 acgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcgg 35994798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 1509597 - 1509534
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| |||||| ||||    
T  1509597 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 1509534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 10268493 - 10268560
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 14832151 - 14832092
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||||||  |||||||| |||||||||||||||| ||| |||| ||||    
T  14832151 gacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 34910435 - 34910400
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcc 34910400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 51206354 - 51206417
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||| ||||||||||| ||||| || ||||||||| |||||||||||||||| |||||| ||||    
T  51206354 gacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgt 51206417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 8412972 - 8413029
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtg 160  Q
    ||||||||  ||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  8412972 attatgtgtttttctcaaattattagttgtgtcggtctgtcaatgtccggtgtccgtg 8413029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 32400715 - 32400798
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatcc 169  Q
    ||||||||||||||||    ||||||| |  ||||||||||||||| |||||||  |||| |||||||||||| |||||||| ||||    
T  32400715 gacacttgtaattacaa---attatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccggtgttcgtgtccgtatcc 32400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 41961651 - 41961723
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| |||||||||||||||||  | || ||||||  |||||||||||||||||||| ||| |||| ||||||    
T  41961651 gacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtc 41961723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 750619 - 750678
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    |||| |||||||||||||| ||  | |||||||||  |||||||||||||||||||||||    
T  750619 gacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcg 750678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 4990913 - 4990948
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  4990913 tatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 20503583 - 20503548
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  20503583 tatgaagcacggacactcctcggattaggcgtgtcc 20503548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 34185053 - 34185088
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcc 34185088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 8789489 - 8789523
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtc 8789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 8842447 - 8842413
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  8842447 tatgaagcacggacactcctcggattaggcgtgtc 8842413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 15796295 - 15796369
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| ||||||||||| || ||||| ||| |||||||||||||||  |||||||| |||| | ||||||    
T  15796295 gacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccg 15796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 24205046 - 24205116
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| |||||||| |||||||||| | ||| |||||||||||   ||||||| |||| ||||||||    
T  24205046 acgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccg 24205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 26492206 - 26492280
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||| ||||||||||||| || ||| | ||| |||||||||||||||| | |||||| |||| ||||||||    
T  26492206 gacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccg 26492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 40052364 - 40052318
Alignment:
Q  103 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  40052364 attatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 55401193 - 55401159
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtc 70  Q
    |||||||||||||||||||||||||||| ||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtc 55401159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 14979224 - 14979179
Alignment:
Q  92 aattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    ||||||| || ||||||||| |||||||||||||||| ||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcgg 14979179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 34185124 - 34185189
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| ||||||||||||||||| || ||| ||||| ||||| ||||||||||  ||||||| ||||    
T  34185124 gacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 3164033 - 3164085
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    ||||||||  ||||| || ||||||||| |||||||||||||||| |||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcg 3164085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 17005625 - 17005693
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||||||| |||||||| || ||||| ||| ||| ||||||||||||| |||| |||| || |||||||    
T  17005625 cgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtcagtgtcc 17005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 27505304 - 27505244
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||||||||||||||| |  ||||||||| ||||  |||||||||| ||||||||    
T  27505304 gacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcgg 27505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 29508497 - 29508437
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||| | |||||||| || ||||| ||| ||||||||||||||||| || |||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgt 29508437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 22652034 - 22651960
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  22652034 gacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 22651960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 36450762 - 36450841
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 36450841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 30271300 - 30271371
Alignment:
Q  85 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtc 156  Q
    |||||||||||||| || ||||||||| |||||||||| ||||| |||||||| |||| |||||||||||||    
T  30271300 cacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccggtgtc 30271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 15816130 - 15816204
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||| |||||||| |  ||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  15816130 gacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 15816204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 4298887 - 4298956
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagt 146  Q
    |||| |||||||||||||||||||  ||||||||| |||||||||||||||  |||||||| ||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagt 4298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 184
Target Start/End: Complemental strand, 25566899 - 25566789
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt---tagtgtccggtgtccgtgtccgcatccgcat 173  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||| |||| |   |  ||||||||||| |||||   ||||| ||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtctgtgtcatgtccggtgtctgtgtctatatccgtat 25566800  T
Q  174 ccgtgcttcat 184  Q
    |||||||||||    
T  25566799 ccgtgcttcat 25566789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 29447111 - 29447170
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    |||| ||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcg 29447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 18170483 - 18170557
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| |||||||||||||| ||||||| | ||||||||||| ||| ||||||||| |||| ||||||||    
T  18170483 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccg 18170557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 18634051 - 18634125
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||| |||||||||||||| ||||||| | ||||||||||| ||| ||||||||| |||| ||||||||    
T  18634051 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccg 18634125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 22197749 - 22197815
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||| ||||| || |||||||||||    
T  22197749 gacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtc 22197815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 24613578 - 24613509
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtg 147  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| ||||||||||||| ||||    
T  24613578 gacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 4948710 - 4948657
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagtt 130  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 13436965 - 13437038
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 150  Q
    |||| |||||||||| |||||  || ||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  13436965 gacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 25192353 - 25192422
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||| |||||| | || ||||||| |||||||||||||||||| |||||||| |||| ||||||||    
T  25192353 cgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccg 25192422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 29510310 - 29510379
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||| | || ||| ||||| |||||||||||||||| |||||||| |||| ||||||||    
T  29510310 cgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 29510379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 31514972 - 31514867
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgt 134  Q
    |||||||||||||||||||||||||||| ||||||   |   ||| | ||||||||| ||||  || |||||||||  ||||||||||||||||||||||    
T  31514972 tatgaagcacggacactcctcggattaggcgtgtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgt 31514873  T
Q  135 cggtgt 140  Q
    | ||||    
T  31514872 cagtgt 31514867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 2572057 - 2572116
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| |||||||    
T  2572057 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcg 2572116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 8343030 - 8342967
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 140  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| | |||||||||    
T  8343030 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgt 8342967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 8343368 - 8343309
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||| | |||||||||||    
T  8343368 gacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgt 8343309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 22652105 - 22652070
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcc 22652070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 5813650 - 5813576
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||| ||||| |  | |||||||||||||||||||||||| |||||||| ||||  |||||||    
T  5813650 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccg 5813576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 20873127 - 20873053
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||  | |||||| |||| ||||||||    
T  20873127 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccg 20873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 11803388 - 11803355
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgt 69  Q
    ||||||||||||||||||||||||||||||||||    
T  11803388 tatgaagcacggacactcctcggattagacgtgt 11803355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 21465463 - 21465391
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgt 159  Q
    |||||||||||||||| | ||||| ||| |||||||||||||||| |||||| |||   | |||||||||||||||    
T  21465463 acacttgtaattacatcgaattatatgattttttcaaattattagctgtgtccgtg---tcgtgtccggtgtccgt 21465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 22596045 - 22595981
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 148  Q
    ||||||||||||||| || ||||||| | ||||| |||||||||| |||||||| |||| |||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 34897179 - 34897092
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    |||||||||||||||||||||| |||| | ||||||||     || |||||| | |||||||| || ||||||||| ||| ||||||||||||    
T  34897179 tatgaagcacggacactcctcgaattacatgtgtccga-----catcgacacatataattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 41831945 - 41832001
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||||||||||| ||||| || ||||||||| |||||||||||||||  ||||||||    
T  41831945 acgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgg 41832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 18407772 - 18407717
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    ||||||||||||||||| || ||||||||| |||||  ||||||||| ||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcgg 18407717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 24413500 - 24413535
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||| ||||||||||||||||||    
T  24413500 tatgaagcacggacacttctcggattagacgtgtcc 24413535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 67
Target Start/End: Original strand, 27067232 - 27067263
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgt 67  Q
    ||||||||||||||||||||||||||||||||    
T  27067232 tatgaagcacggacactcctcggattagacgt 27067263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 28745556 - 28745505
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    |||| ||||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  28745556 gacatcgacatttgtagttacattgaattatgtgaatttttcaaattattag 28745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 37283756 - 37283791
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||| |||||||||||||||||||||||    
T  37283756 tatgaagcacgggcactcctcggattagacgtgtcc 37283791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 31557054 - 31556985
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtg 147  Q
    |||| ||| ||||||||||||| || ||||||||| |||||||||||||||  |||||||| |||| ||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtga-tttttcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 3025668 - 3025635
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtc 70  Q
    ||||||||||||||||||||||||||| ||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtc 3025635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 13203733 - 13203700
Alignment:
Q  38 tgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  13203733 tgaagcacggacactcctcggattagatgtgtcc 13203700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 30077394 - 30077439
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    |||||||||||||||| || |||||||||  |||||||||||||||    
T  30077394 gacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 17468516 - 17468568
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 136  Q
    |||||||||||||||  | ||||||||| |||| ||||||||| |||||||||    
T  17468516 acacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtcg 17468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 24196628 - 24196672
Alignment:
Q  107 tgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccg 24196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 29447039 - 29447075
Alignment:
Q  35 ttatgaagcacggacactcctcggattagacgtgtcc 71  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  29447039 ttatgaagcacggacactcctaggattaggcgtgtcc 29447075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 31236583 - 31236643
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||| | ||||||||||| ||||||||| ||| ||||||||||||  ||||||| ||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 36934714 - 36934654
Alignment:
Q  91 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||| || ||||||||| |||||| |||||||||  ||||||  |||||||||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccg 36934654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 40332244 - 40332200
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattatt 126  Q
    ||||||||||||||||| || ||||||||| ||| ||||||||||    
T  40332244 cgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 44067570 - 44067502
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||| |||||||| |||||||||| | ||| |||||||||||   ||||||| |||| ||||||    
T  44067570 acgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtc 44067502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 20278 - 20156
Alignment:
Q  36 tatgaagcacggac---actcctcggattagacgtgtcc----gataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 128  Q
    ||||||||||||||   |||||||||||||| |||||||    || | ||||  |||||||||||||||| || ||||||||| ||||||||||||||||    
T  20278 tatgaagcacggactgtactcctcggattaggcgtgtcccaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 20179  T
Q  129 ttgtgtcggtgtgttagtgtccg 151  Q
     |||||||| |||| | ||||||    
T  20178 ctgtgtcggcgtgtcattgtccg 20156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 51862 - 51795
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 51795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 14580 - 14523
Alignment:
Q  85 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 178825 - 178894
Alignment:
Q  83 gacacttgtaattacattgtattatg-tgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||||||||||| || |||||| ||| ||||||||||||||||||||||||| |||| ||||||||    
T  178825 gacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 178894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 13458 - 13384
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||| ||||||||| || || ||||||||| ||| ||||||||||||||||||||| |||| ||||||||    
T  13458 gacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccg 13384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 21869 - 21943
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||| ||||||||| || || ||||||||| ||| ||||||||||||||||||||| |||| ||||||||    
T  21869 gacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccg 21943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 225273 - 225343
Alignment:
Q  81 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||| ||||||||||||||||||| | ||| |||||||||||  |||||||| |||| ||||||||    
T  225273 acgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccg 225343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 19626 - 19562
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  19626 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 8067 - 8003
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||| ||||    
T  8067 gacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 23828 - 23740
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    |||| ||||||||||||||||| || |||||||||  |||||||||||||||  |||| | |||||| |||||||||||| ||| ||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccggtgttcgtatccg 23740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 4891 - 4953
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttc-aaattattagttgtgtcggtgtgttag 145  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| ||||||||||||||||    
T  4891 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 4822 - 4857
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  4822 tatgaagcacggacactcctcggattaggcgtgtcc 4857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 463 - 537
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| || ||| ||||| ||||||||||||||||  ||||||| || | ||||||||    
T  463 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccg 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 402 - 430
Alignment:
Q  35 ttatgaagcacggacactcctcggattag 63  Q
    |||||||||||||||||||||||||||||    
T  402 ttatgaagcacggacactcctcggattag 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 8856 - 8782
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| ||||||||||||||||| |  || || ||| |||||||||||||||| |||||||| |||| ||||||||    
T  8856 gacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 8782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 151
Target Start/End: Original strand, 10509 - 10546
Alignment:
Q  114 ttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10509 ttttcaaattattagctgtgtcggtgtgttagtgtccg 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 92859 - 92791
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||||||||||||||| || ||||||| | ||| ||||||||||||  ||||||| |||| ||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccg 92791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 92940 - 92905
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtcc 92905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 3426 - 3391
Alignment:
Q  36 tatgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||||| |||||||    
T  3426 tatgaagcacggacactcctcggattaggcgtgtcc 3391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 23490 - 23373
Alignment:
Q  65 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 164  Q
    ||||||||| | |||| |||||||| |||||||| || ||||||||| |||||  | ||||||  |||||||| |||| |||||| | |||| |||||||    
T  23490 cgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctg-tgtc-gtgtccg 23393  T
Q  165 catccgcatccgtgcttcat 184  Q
      |||| |||||||||||||    
T  23392 tgtccgtatccgtgcttcat 23373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 130535 - 130480
Alignment:
Q  82 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    ||||||||||||||||| || ||||||||| ||||||||| |||||  ||||||||    
T  130535 cgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcgg 130480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 7319 - 7377
Alignment:
Q  84 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    |||||| |||||||| |  ||||||||| |||| |||||||||||||||||||| ||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 33375 - 33429
Alignment:
Q  88 ttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 142  Q
    ||||||||||| || ||||||| | |||||||||||||||| |||||||| ||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt 33429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 9678 - 9712
Alignment:
Q  37 atgaagcacggacactcctcggattagacgtgtcc 71  Q
    |||||||||||||||||||||||||| ||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcc 9712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 241652 - 241578
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 151  Q
    |||| |||||||  |||||||| |  ||||||||| |||| ||||||||||| |||||||| |||| ||||||||    
T  241652 gacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccg 241578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 8636 - 8696
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 137  Q
    |||| ||||| ||||||||| |  | |||||||||  ||||||||||||||||||||||||    
T  8636 gacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcgg 8696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 3856 - 3900
Alignment:
Q  83 gacacttgtaattacattgtattatgtgactttttcaaattatta 127  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||    
T  3856 gacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 135313 - 135385
Alignment:
Q  77 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 149  Q
    |||| |||||| | ||||||||  | ||||||||| ||| ||||||||||||  ||||||||||||| |||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtc 135385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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