View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6858_low_5 (Length: 331)

Name: NF6858_low_5
Description: NF6858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6858_low_5
NF6858_low_5
[»] chr6 (31 HSPs)
chr6 (1-156)||(15576533-15576688)
chr6 (156-306)||(5004061-5004217)
chr6 (156-306)||(25506450-25506606)
chr6 (156-297)||(13825703-13825850)
chr6 (155-321)||(5994698-5994871)
chr6 (156-310)||(25550295-25550455)
chr6 (156-306)||(30824438-30824594)
chr6 (155-325)||(33298084-33298259)
chr6 (158-323)||(25991852-25992023)
chr6 (156-306)||(23925335-23925492)
chr6 (156-306)||(11279837-11279993)
chr6 (156-306)||(35091585-35091741)
chr6 (155-264)||(15391568-15391677)
chr6 (18-152)||(15574462-15574599)
chr6 (154-258)||(13490191-13490295)
chr6 (156-208)||(5489132-5489184)
chr6 (12-90)||(16526916-16526994)
chr6 (155-217)||(11053701-11053764)
chr6 (15-59)||(12972839-12972883)
chr6 (98-152)||(17860886-17860940)
chr6 (269-323)||(25711862-25711916)
chr6 (215-257)||(26526666-26526708)
chr6 (156-217)||(30114444-30114505)
chr6 (265-325)||(5489055-5489115)
chr6 (266-306)||(12667456-12667496)
chr6 (266-306)||(28702806-28702846)
chr6 (266-323)||(25690879-25690936)
chr6 (266-323)||(25697672-25697729)
chr6 (266-298)||(1625001-1625033)
chr6 (266-306)||(18960917-18960957)
chr6 (266-306)||(20459375-20459415)
[»] chr7 (18 HSPs)
chr7 (155-325)||(10439936-10440112)
chr7 (156-306)||(12978455-12978611)
chr7 (156-306)||(18304301-18304457)
chr7 (155-306)||(4952306-4952463)
chr7 (155-306)||(13831499-13831656)
chr7 (155-306)||(13839530-13839687)
chr7 (156-252)||(30244775-30244871)
chr7 (155-217)||(4941581-4941643)
chr7 (12-152)||(21471316-21471459)
chr7 (164-258)||(30255420-30255514)
chr7 (1-152)||(5721920-5722076)
chr7 (156-258)||(30245568-30245670)
chr7 (155-250)||(21662993-21663089)
chr7 (266-304)||(43906204-43906242)
chr7 (266-307)||(39866422-39866463)
chr7 (12-71)||(7955796-7955855)
chr7 (18-67)||(1074076-1074125)
chr7 (20-72)||(16166702-16166754)
[»] chr4 (16 HSPs)
chr4 (154-325)||(52295602-52295780)
chr4 (156-325)||(27343581-27343756)
chr4 (155-325)||(12996475-12996651)
chr4 (155-306)||(8094191-8094348)
chr4 (156-306)||(8102997-8103153)
chr4 (156-306)||(4523589-4523745)
chr4 (156-251)||(21532274-21532369)
chr4 (156-251)||(12428448-12428543)
chr4 (156-229)||(10638328-10638400)
chr4 (155-250)||(33188765-33188859)
chr4 (211-258)||(12402907-12402954)
chr4 (18-84)||(15787861-15787927)
chr4 (156-257)||(3424331-3424432)
chr4 (265-325)||(10638421-10638481)
chr4 (266-306)||(19737928-19737968)
chr4 (266-321)||(10814330-10814385)
[»] scaffold0156 (1 HSPs)
scaffold0156 (156-325)||(35246-35421)
[»] chr8 (23 HSPs)
chr8 (156-297)||(17973565-17973712)
chr8 (156-306)||(30938282-30938438)
chr8 (155-306)||(39837471-39837628)
chr8 (156-306)||(25579721-25579877)
chr8 (156-295)||(17683716-17683861)
chr8 (156-289)||(4839708-4839847)
chr8 (155-295)||(17664560-17664706)
chr8 (155-325)||(26873493-26873670)
chr8 (156-306)||(1406982-1407138)
chr8 (156-325)||(26875943-26876119)
chr8 (156-306)||(39845514-39845670)
chr8 (18-152)||(16052736-16052873)
chr8 (155-258)||(4582203-4582306)
chr8 (23-81)||(22894996-22895054)
chr8 (155-217)||(6670710-6670772)
chr8 (18-91)||(28901797-28901869)
chr8 (266-304)||(15061257-15061295)
chr8 (266-310)||(12844052-12844097)
chr8 (266-299)||(22156912-22156945)
chr8 (266-299)||(32006839-32006872)
chr8 (266-298)||(20028329-20028361)
chr8 (266-310)||(25766187-25766231)
chr8 (266-310)||(25795681-25795725)
[»] chr3 (31 HSPs)
chr3 (155-329)||(14538490-14538671)
chr3 (156-311)||(50824352-50824513)
chr3 (156-311)||(50851347-50851508)
chr3 (155-325)||(27341224-27341401)
chr3 (155-306)||(41006555-41006712)
chr3 (155-306)||(41015335-41015492)
chr3 (155-306)||(8154553-8154710)
chr3 (155-306)||(9525343-9525500)
chr3 (156-304)||(9555019-9555173)
chr3 (156-325)||(2211239-2211414)
chr3 (156-251)||(28470187-28470282)
chr3 (155-250)||(17933654-17933749)
chr3 (155-264)||(17919198-17919307)
chr3 (156-220)||(17628265-17628329)
chr3 (156-255)||(21186747-21186846)
chr3 (158-264)||(43470510-43470615)
chr3 (155-249)||(16816176-16816269)
chr3 (160-258)||(18349560-18349658)
chr3 (155-258)||(8197659-8197762)
chr3 (156-254)||(30443-30541)
chr3 (1-152)||(11520659-11520814)
chr3 (156-255)||(18039011-18039110)
chr3 (266-324)||(13509315-13509373)
chr3 (266-304)||(14881238-14881276)
chr3 (266-306)||(13105558-13105598)
chr3 (266-306)||(13111706-13111746)
chr3 (266-306)||(48060645-48060685)
chr3 (266-304)||(14893069-14893107)
chr3 (155-183)||(6958978-6959006)
chr3 (266-310)||(9523684-9523728)
chr3 (266-298)||(14740071-14740103)
[»] scaffold0497 (1 HSPs)
scaffold0497 (156-325)||(10993-11167)
[»] chr5 (27 HSPs)
chr5 (156-325)||(29186168-29186343)
chr5 (155-306)||(24956755-24956912)
chr5 (155-306)||(24965218-24965375)
chr5 (155-323)||(20372805-20372979)
chr5 (155-323)||(23349968-23350142)
chr5 (156-323)||(20398527-20398700)
chr5 (156-306)||(43597955-43598111)
chr5 (156-306)||(43603447-43603603)
chr5 (156-306)||(43608939-43609095)
chr5 (153-306)||(1728068-1728227)
chr5 (155-306)||(28852549-28852706)
chr5 (156-306)||(28843940-28844096)
chr5 (156-325)||(31410890-31411065)
chr5 (156-325)||(31421789-31421965)
chr5 (156-264)||(19223555-19223663)
chr5 (12-152)||(17027056-17027198)
chr5 (1-71)||(24841367-24841438)
chr5 (12-144)||(22754483-22754618)
chr5 (159-258)||(41099739-41099838)
chr5 (1-81)||(11274790-11274871)
chr5 (266-323)||(40014981-40015040)
chr5 (1-84)||(19331160-19331244)
chr5 (266-306)||(36454733-36454773)
chr5 (269-306)||(20099569-20099606)
chr5 (266-299)||(37048448-37048481)
chr5 (266-306)||(15956900-15956940)
chr5 (266-306)||(36448355-36448395)
[»] chr2 (31 HSPs)
chr2 (155-306)||(15944466-15944623)
chr2 (155-306)||(35138592-35138749)
chr2 (155-306)||(35146928-35147085)
chr2 (155-306)||(41233753-41233910)
chr2 (156-306)||(14582925-14583081)
chr2 (156-306)||(15952981-15953137)
chr2 (156-306)||(38168266-38168422)
chr2 (156-261)||(17687358-17687463)
chr2 (155-306)||(42565838-42565995)
chr2 (156-306)||(42574462-42574618)
chr2 (156-251)||(20372283-20372378)
chr2 (184-325)||(35037884-35038031)
chr2 (156-264)||(44372705-44372813)
chr2 (156-264)||(44388616-44388724)
chr2 (155-264)||(20621517-20621626)
chr2 (156-264)||(25483601-25483709)
chr2 (156-264)||(25491207-25491315)
chr2 (156-258)||(27606608-27606709)
chr2 (156-258)||(42249418-42249520)
chr2 (156-263)||(35303737-35303844)
chr2 (156-258)||(24285696-24285798)
chr2 (156-258)||(34070567-34070669)
chr2 (158-258)||(26903296-26903396)
chr2 (279-329)||(17687307-17687357)
chr2 (155-217)||(24292371-24292433)
chr2 (266-306)||(18208-18248)
chr2 (1-73)||(22389193-22389265)
chr2 (266-306)||(36735439-36735479)
chr2 (1-54)||(39730111-39730165)
chr2 (266-299)||(20279260-20279293)
chr2 (266-323)||(11873790-11873849)
[»] chr1 (24 HSPs)
chr1 (155-306)||(31548522-31548679)
chr1 (156-306)||(31539954-31540110)
chr1 (156-306)||(35103973-35104129)
chr1 (155-306)||(3432799-3432956)
chr1 (156-325)||(32137644-32137819)
chr1 (156-329)||(41746578-41746758)
chr1 (155-258)||(29221451-29221554)
chr1 (18-81)||(23223131-23223194)
chr1 (156-258)||(21498861-21498963)
chr1 (156-264)||(44320149-44320257)
chr1 (158-256)||(51058353-51058450)
chr1 (266-325)||(13450139-13450198)
chr1 (158-264)||(28457556-28457664)
chr1 (20-72)||(31313020-31313072)
chr1 (266-306)||(47108478-47108518)
chr1 (20-71)||(27754786-27754837)
chr1 (20-74)||(31313107-31313161)
chr1 (156-189)||(20314059-20314092)
chr1 (266-306)||(1961742-1961782)
chr1 (266-306)||(18098481-18098521)
chr1 (266-306)||(20429459-20429499)
chr1 (266-310)||(20518385-20518429)
chr1 (266-298)||(39454485-39454517)
chr1 (266-306)||(44832475-44832515)
[»] scaffold0111 (1 HSPs)
scaffold0111 (156-329)||(33035-33214)
[»] scaffold0016 (1 HSPs)
scaffold0016 (155-321)||(23463-23636)
[»] scaffold0173 (1 HSPs)
scaffold0173 (155-321)||(823-995)
[»] scaffold0002 (1 HSPs)
scaffold0002 (156-297)||(121228-121375)
[»] scaffold0083 (1 HSPs)
scaffold0083 (156-306)||(15813-15970)
[»] scaffold0632 (1 HSPs)
scaffold0632 (156-325)||(4390-4566)
[»] scaffold0209 (1 HSPs)
scaffold0209 (156-298)||(1-149)
[»] scaffold0039 (1 HSPs)
scaffold0039 (156-264)||(40790-40898)
[»] scaffold0431 (1 HSPs)
scaffold0431 (156-251)||(139-234)
[»] scaffold0222 (1 HSPs)
scaffold0222 (156-264)||(20439-20547)
[»] scaffold0170 (1 HSPs)
scaffold0170 (156-252)||(7159-7255)
[»] scaffold0015 (1 HSPs)
scaffold0015 (154-258)||(192526-192630)
[»] scaffold0863 (1 HSPs)
scaffold0863 (155-258)||(335-438)
[»] scaffold0044 (2 HSPs)
scaffold0044 (155-258)||(65501-65604)
scaffold0044 (155-258)||(81749-81852)
[»] scaffold0048 (1 HSPs)
scaffold0048 (156-228)||(7622-7694)
[»] scaffold0389 (1 HSPs)
scaffold0389 (155-258)||(415-518)
[»] scaffold0991 (1 HSPs)
scaffold0991 (156-254)||(340-438)
[»] scaffold1487 (1 HSPs)
scaffold1487 (163-202)||(762-801)
[»] scaffold0514 (1 HSPs)
scaffold0514 (155-217)||(10912-10974)
[»] scaffold0990 (1 HSPs)
scaffold0990 (39-91)||(3075-3127)
[»] scaffold0027 (2 HSPs)
scaffold0027 (155-191)||(65708-65744)
scaffold0027 (266-306)||(23688-23728)
[»] scaffold0323 (1 HSPs)
scaffold0323 (273-323)||(17619-17669)
[»] scaffold0167 (1 HSPs)
scaffold0167 (266-304)||(8084-8122)
[»] scaffold0458 (1 HSPs)
scaffold0458 (266-298)||(9201-9233)
[»] scaffold0206 (2 HSPs)
scaffold0206 (266-298)||(259-291)
scaffold0206 (266-298)||(9021-9053)
[»] scaffold0001 (1 HSPs)
scaffold0001 (266-310)||(4862-4906)


Alignment Details
Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15576533 - 15576688
Alignment:
Q  1 tttgtcacactcagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccgaaggcat 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  15576533 tttgtcacactcagccatcatgtgattgtaccttactatgagattgaagcaattcgaaatagacattcaaggtctatatcaccatacacactggaggcat 15576632  T
Q  101 tttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagtatgct 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15576633 tttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagtatgct 15576688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 5004061 - 5004217
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  5004061 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 5004160  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  5004161 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 5004217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 25506606 - 25506450
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  25506606 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcag 25506507  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||       ||||||||||||||||||||||| |||||||||| ||||||    
T  25506506 agaggttactttaaaatacctcatttttgattccgagtcaggccctcttttctcttt 25506450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 13825703 - 13825850
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||    
T  13825703 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgacag 13825802  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctct 297  Q
    ||| |||||      |||||||||||||||||||||||||||||||||    
T  13825803 agaggttactttgaagtacctcatttttgattccgagtcgggccctct 13825850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 321
Target Start/End: Original strand, 5994698 - 5994871
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||| ||||    
T  5994698 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggca 5994797  T
Q  255 gagaagttac------gtacctca-tttttgattccgagtcgggccctctttcctctttatttagtttttattt 321  Q
     ||| |||||      |||||||| |||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  5994798 aagaggttactttgaagtacctcattttttgattccgagtcgggccctcttccctctttgttttctttttattt 5994871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 310
Target Start/End: Original strand, 25550295 - 25550455
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  25550295 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggcag 25550394  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttattt 310  Q
    ||| |||||      ||||||||||||| |||||||||||| || ||||  ||||||||||    
T  25550395 agaggttactttgaagtacctcattttttattccgagtcggaccatcttctctctttattt 25550455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 30824594 - 30824438
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  30824594 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30824495  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      |||||||||||||||||||||||||| | |||||| ||||||    
T  30824494 agaggttactttgaagtacctcatttttgattccgagtcggactctcttttctcttt 30824438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 33298084 - 33298259
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  33298084 ctgtcataccccaacttttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgaca 33298183  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
     || ||||||      ||||||||||||| ||||||||| || |||| ||  ||||||||||  |||||||||||||    
T  33298184 aag-agttactttgaagtacctcattttttattccgagtaggacccttttctctctttattttatttttatttcagt 33298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 323
Target Start/End: Original strand, 25991852 - 25992023
Alignment:
Q  158 tcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagag 257  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  25991852 tcataccccaaatgttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagag 25991951  T
Q  258 aagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    | |||||      ||||||||||||| |||| ||||||| |||||||  ||||||||||| | |||||||||    
T  25991952 aggttactttgaagtacctcattttttattcagagtcggaccctcttctctctttatttactctttatttca 25992023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 23925335 - 23925492
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||   |||||||||||| ||    
T  23925335 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtag 23925434  T
Q  256 agaagttac------gtacctca-tttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      |||||||| |||||||||||||||| ||||||||| |||||||    
T  23925435 agatgttactttgaagtacctcattttttgattccgagtcaggccctcttccctcttt 23925492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 11279837 - 11279993
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||     
T  11279837 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 11279936  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  11279937 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 11279993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 35091741 - 35091585
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||     
T  35091741 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaa 35091642  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      ||||||||||||| ||| ||| |||| |||||||| ||||||    
T  35091641 ggaggttactttgaagtacctcattttttatttcgaatcggaccctcttttctcttt 35091585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 15391677 - 15391568
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| ||    
T  15391677 ctgtcatatcccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgaca 15391578  T
Q  255 gagaagttac 264  Q
     ||| |||||    
T  15391577 aagaggttac 15391568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 15574599 - 15574462
Alignment:
Q  18 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttcaaggttatca 114  Q
    ||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||||  ||||||||  |   |||  ||||||||||||| |    
T  15574599 tcatgtgattgtatcttgctatgagattgaagcaattatacatagacattcaaggtttatatcattatacacacatatagaggacttttcaaggttataa 15574500  T
Q  115 cgtggttgaggttaaggtggggtatatttgagaaagta 152  Q
    ||||| ||||||||||||||| |||||||| |||||||    
T  15574499 cgtggctgaggttaaggtgggatatatttgggaaagta 15574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 13490191 - 13490295
Alignment:
Q  154 gctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggc 253  Q
    ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||  |||||||||||||  ||||| || |||| |||||    
T  13490191 gctgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatctgtaaaaccgggaattttcgttatttcagacaaaatctcggc 13490290  T
Q  254 agaga 258  Q
    |||||    
T  13490291 agaga 13490295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 5489184 - 5489132
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgt 208  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5489184 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgt 5489132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 16526994 - 16526916
Alignment:
Q  12 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacaca 90  Q
    ||||| ||||||||||||||||| |||| | ||| ||||||||||||| ||||||||||||| ||||||| || |||||    
T  16526994 cagtcgtcatgtgattgtacctttctataacattaaagcaattctaaacagacattcaaggtatatatcatcacacaca 16526916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 11053701 - 11053764
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacc-cattttattcgtatttttaaa 217  Q
    ||||||||||||||||||||||||||||| |||||  |||||  ||||||||||||||||||||    
T  11053701 ctgtcataccccaaattttgaccacttttttctatttttaccaaattttattcgtatttttaaa 11053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 12972839 - 12972883
Alignment:
Q  15 tcatcatgtgattgtaccttactatgagattgaagcaattctaaa 59  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12972839 tcatcatgtgattgtaccttgctatgagattgaatcaattctaaa 12972883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 17860886 - 17860940
Alignment:
Q  98 cattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 152  Q
    ||||||||||||||| |||||  ||||||||||||||| ||||||||| ||||||    
T  17860886 cattttcaaggttataacgtgactgaggttaaggtgggatatatttgaaaaagta 17860940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 25711862 - 25711916
Alignment:
Q  269 ctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    ||||||||||||||||||||||||||||||  ||||||||||  | |||||||||    
T  25711862 ctcatttttgattccgagtcgggccctcttctctctttattttctctttatttca 25711916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 26526708 - 26526666
Alignment:
Q  215 aaagtcgggaattttcgtcgtttcatacgaaatttcggcagag 257  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  26526708 aaagtcgggaattttcgtcgtttcagacgaaatatcggcagag 26526666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 30114444 - 30114505
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacc-cattttattcgtatttttaaa 217  Q
    |||||||||||||||||||||||||||| |||||  |||||  ||||||||||||||||||||    
T  30114444 tgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 30114505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 5489115 - 5489055
Alignment:
Q  265 gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    |||| |||||||||||||| |||||| |||| || |||||||||||  |||||||||||||    
T  5489115 gtacttcatttttgattccaagtcggaccctgttccctctttattttctttttatttcagt 5489055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 12667496 - 12667456
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  12667496 tacctcatttttgattccgagtcggaccctcttttctcttt 12667456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 28702846 - 28702806
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  28702846 tacctcatttttgattccgattcgggccctcttttctcttt 28702806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 25690879 - 25690936
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    |||||||||||| |||||||||||| |||||||  ||||||||||  | |||||||||    
T  25690879 tacctcattttttattccgagtcggaccctcttctctctttattttctctttatttca 25690936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 25697672 - 25697729
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    |||||||||||| |||||||||||| |||||||  ||||||||||  | |||||||||    
T  25697672 tacctcattttttattccgagtcggaccctcttctctctttattttctctttatttca 25697729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Original strand, 1625001 - 1625033
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||| ||||||||||||||||||||||||    
T  1625001 tacctcatatttgattccgagtcgggccctctt 1625033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 18960957 - 18960917
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  18960957 tacctcattttttattccgagtcggaccctcttttctcttt 18960917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 20459415 - 20459375
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| ||||||| ||||||||||||| ||||||    
T  20459415 tacctcattttttattccgaatcgggccctcttttctcttt 20459375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 9e-58; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 10439936 - 10440112
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10439936 ctgtcataccccaaattttgaccacttttctctattcttgcccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 10440035  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    |||| |||||      ||||||||||||| |||||||||| | |||||||| ||||||||||  |||||||||||||    
T  10440036 gagaggttactttaaagtacctcattttttattccgagtcagaccctcttttctctttattttctttttatttcagt 10440112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 12978455 - 12978611
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  12978455 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 12978554  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  12978555 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 12978611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 18304457 - 18304301
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  18304457 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 18304358  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| ||| |||||||| |||||||| ||||||    
T  18304357 agaggttactttgaagtacctcattttttatttcgagtcggaccctcttttctcttt 18304301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 4952463 - 4952306
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  4952463 ctgtcatacctcaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttggca 4952364  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||||||||||    
T  4952363 aagaggttactttgaagtacctcattttttattccgagtcggaccctctttcctcttt 4952306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 13831499 - 13831656
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||    
T  13831499 ctgtcataccctaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 13831598  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  13831599 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 13831656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 13839530 - 13839687
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||    
T  13839530 ctgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 13839629  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  13839630 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 13839687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 30244775 - 30244871
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcgg 252  Q
    ||||||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| ||||||||||| ||||||  || ||||||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctatttttatccattttattcgtatttttaaagtcaggaattttcgttgtttcagtcgtaatttcgg 30244871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 4941643 - 4941581
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaa 217  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4941643 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaa 4941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 21471459 - 21471316
Alignment:
Q  12 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac---cgaaggcattttcaagg 108  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||| || ||||||   | ||||  |||||||||    
T  21471459 cagtcgtcatgtgattgtaccttgctatgagattgaagcaattctaaatagacattcaatgtatatatcatcacacacacatacaaaggacttttcaagg 21471360  T
Q  109 ttatcacgtggttgaggttaaggtggggtatatttgagaaagta 152  Q
    |||| |||||  | |||||||| | || |||||||  |||||||    
T  21471359 ttataacgtgactaaggttaagttaggatatattttggaaagta 21471316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 30255420 - 30255514
Alignment:
Q  164 cccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagaga 258  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||| | ||| | ||||||||| ||||||  || ||||||||||||||    
T  30255420 cccaaattttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggcagaga 30255514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 5722076 - 5721920
Alignment:
Q  1 tttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---ag 96  Q
    |||||||||||| |||  |||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||   |||| |||| ||||||  |   ||    
T  5722076 tttgtcacactccagtagtcatttgattgtatcttgctatgagattgaagcaattctaaataggcattcaaggcacatattaccagacacacatatagag 5721977  T
Q  97 gcattttcaaggttatcacgtggttgaggtt-aaggtggggtatatttgagaaagta 152  Q
    |  ||||||||||||| |||||| | ||||| |||||||| ||||||| ||||||||    
T  5721976 gttttttcaaggttataacgtggcttaggttaaaggtgggatatattttagaaagta 5721920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 30245568 - 30245670
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||| || ||||||||||||||||||||  ||| ||||||||||||||||||| | ||| | ||||||||| ||||||  || |||||||| ||    
T  30245568 tgtcatacccaaatttttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggaag 30245667  T
Q  256 aga 258  Q
    |||    
T  30245668 aga 30245670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 21663089 - 21662993
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtat-ttttaaagtcgggaattttcgtcgtttcatacgaaatttc 250  Q
    ||||||||||||||||||||| ||||||| ||| |  ||||||||||||||||||| |||||||| || || | |||||||||| | ||||||||||    
T  21663089 ctgtcataccccaaattttgatcacttttatctgtttttacccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttc 21662993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 43906204 - 43906242
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctct 304  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  43906204 tacctcatttttgattccgagtcgggccctcttttctct 43906242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 39866422 - 39866463
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttta 307  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  39866422 tacctcatttttggttccgagtcgggccctcttttctcttta 39866463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 7955855 - 7955796
Alignment:
Q  12 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 71  Q
    |||||||||||||||||||||||  ||||||| | ||||||||| ||| ||||| |||||    
T  7955855 cagtcatcatgtgattgtaccttgttatgagactaaagcaattccaaacagacactcaag 7955796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 1074125 - 1074076
Alignment:
Q  18 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacatt 67  Q
    |||||||||||||||||  ||||||||||||||||||  ||| |||||||    
T  1074125 tcatgtgattgtaccttgttatgagattgaagcaatttcaaacagacatt 1074076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 16166754 - 16166702
Alignment:
Q  20 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaagg 72  Q
    ||||||||||||| || ||| | |||||| |||||||||| ||||||||||||    
T  16166754 atgtgattgtaccatattataaaattgaaacaattctaaacagacattcaagg 16166702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 154 - 325
Target Start/End: Original strand, 52295602 - 52295780
Alignment:
Q  154 gctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggc 253  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  52295602 gctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggc 52295701  T
Q  254 agagaagttac------gtacctca-tttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    |||||  ||||      |||||||| ||||||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  52295702 agagagattactttgaagtacctcattttttgattccgagtcgggccctcttctctctttattttctttttatttcagt 52295780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 27343756 - 27343581
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  27343756 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacag 27343657  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||  ||||||||||  |||||||||||||    
T  27343656 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttattttctttttatttcagt 27343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 325
Target Start/End: Original strand, 12996475 - 12996651
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |    
T  12996475 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggta 12996574  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    |||| |||||      ||||||||||||| |||||||||| | |||||||  |||||| |||  |||||||||||||    
T  12996575 gagaggttactttgaagtacctcattttttattccgagtcagtccctcttctctctttgttttctttttatttcagt 12996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 8094348 - 8094191
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  8094348 ctgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 8094249  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      |||||||||||||||||||||||||| | |||||| ||||||    
T  8094248 aagaggttactttgaagtacctcatttttgattccgagtcggactctcttttctcttt 8094191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 8103153 - 8102997
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  8103153 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 8103054  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      |||||||||||||||||||||||||| | |||||| ||||||    
T  8103053 agaggttactttgaagtacctcatttttgattccgagtcggactctcttttctcttt 8102997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 4523745 - 4523589
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||     
T  4523745 tgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 4523646  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  4523645 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 4523589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 21532369 - 21532274
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcg 251  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  21532369 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcg 21532274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 12428543 - 12428448
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcg 251  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| | | |||||||||  ||||| |||||||||||    
T  12428543 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcg 12428448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 10638328 - 10638400
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaatttt 229  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  10638328 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgta-ttttaaagtcgggaatttt 10638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 33188765 - 33188859
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttc 250  Q
    |||||||||||||||||||||| |||||| |||||  ||| || ||||||| ||||||||||||  | ||||||||||||||||| ||||||||||    
T  33188765 ctgtcataccccaaattttgacaactttt-tctatttttatcctttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttc 33188859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 12402907 - 12402954
Alignment:
Q  211 ttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagaga 258  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12402907 ttttaaagtcaggaattttcgtcgtttcagacgaaatttcggcagaga 12402954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 15787861 - 15787927
Alignment:
Q  18 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcacca 84  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||| || |||||||| ||||    
T  15787861 tcatttgattgtaccttgctatgagattgaatcaattttaaatagacatttaaagtctatattacca 15787927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 257
Target Start/End: Original strand, 3424331 - 3424432
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||| || |||||||||   |||||| |||||||| || ||| |||| |  |||  ||||||||| || |||||||||||||||    
T  3424331 tgtcataccccaaattttgatcatttttctctaattttaccccttttattcttactttaaaagccaagaaagttcgtcgttccagacgaaatttcggcag 3424430  T
Q  256 ag 257  Q
    ||    
T  3424431 ag 3424432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 10638421 - 10638481
Alignment:
Q  265 gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||||||||||||| |||||||||||| ||||||   ||||||||||  |||||||||||||    
T  10638421 gtacctcattttttattccgagtcggaccctctcctctctttattttctttttatttcagt 10638481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 19737968 - 19737928
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  19737968 tacctcatttttgattccgagtcggaccctcttttctcttt 19737928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 10814330 - 10814385
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttatttagtttttattt 321  Q
    |||||||||||| |||||||||| | ||||||| |||||||||||  |||||||||    
T  10814330 tacctcattttttattccgagtcagaccctcttccctctttattttctttttattt 10814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 35421 - 35246
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||     
T  35421 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 35322  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      ||||||||||||| ||||||||||||||||||||  || |||||||  |||||||||||||    
T  35321 agaggttactttgaagtacctcattttttattccgagtcgggccctcttcgctttttattttctttttatttcagt 35246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 8e-55; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 17973565 - 17973712
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17973565 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 17973664  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctct 297  Q
    ||| |||||      ||||||||||||| |||||||||||||||||||    
T  17973665 agaggttactttgaagtacctcattttttattccgagtcgggccctct 17973712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 30938282 - 30938438
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  30938282 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30938381  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  30938382 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 30938438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 39837628 - 39837471
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||    
T  39837628 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 39837529  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  39837528 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 39837471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 25579877 - 25579721
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  25579877 tgtcataccctaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 25579778  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||  |||||||||||||||    
T  25579777 agaggttactttgaagtacctcattttttattccgagtcgaaccctctttcctcttt 25579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 17683861 - 17683716
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||     
T  17683861 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaa 17683762  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccct 295  Q
    |||||||||      ||||||||||||| |||||||||||| ||||    
T  17683761 agaagttactttgaagtacctcattttttattccgagtcggaccct 17683716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 156 - 289
Target Start/End: Complemental strand, 4839847 - 4839708
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||     
T  4839847 tgtcataccccaaattttgaccgcttttctctattcttacctattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 4839748  T
Q  256 agaagttac------gtacctcatttttgattccgagtcg 289  Q
    |||||||||      |||||||||||||||||||| ||||    
T  4839747 agaagttactttgaagtacctcatttttgattccgtgtcg 4839708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 295
Target Start/End: Complemental strand, 17664706 - 17664560
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| | ||    
T  17664706 ctgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcatcgtttcagacgaaattttgaca 17664607  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccct 295  Q
     |||||||||      ||||||||||||| |||||||||||| ||||    
T  17664606 aagaagttactttgaagtacctcattttttattccgagtcggaccct 17664560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 26873670 - 26873493
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||| ||    
T  26873670 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgaca 26873571  T
Q  255 gagaagttac------gtacctca-tttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
     ||| |||||      |||||| | ||||||||||||||| ||||| ||||  ||||||||||  |||||||||||||    
T  26873570 aagaggttactttaaagtaccttattttttgattccgagtagggccgtcttctctctttattttctttttatttcagt 26873493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 1407138 - 1406982
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||     
T  1407138 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaa 1407039  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  1407038 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 1406982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 26876119 - 26875943
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||| ||     
T  26876119 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaa 26876020  T
Q  256 agaagttac------gtacctca-tttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||       ||||||| ||||||||||||||| ||||| ||||  ||||||||||  |||||||||||||    
T  26876019 agaggttactttaaaatacctcattttttgattccgagtagggccatcttctctctttattttctttttatttcagt 26875943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 39845670 - 39845514
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||     
T  39845670 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 39845571  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |  ||||||||| |||||||| ||||||    
T  39845570 agaggttactttgaagtacctcattttttaaaccgagtcggaccctcttttctcttt 39845514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 16052736 - 16052873
Alignment:
Q  18 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---aggcattttcaaggttatca 114  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||   ||||||| || |||||   |   |||| ||||||||||||| |    
T  16052736 tcatgtgattgtaccttgctatgagattgaagcaattcgaaacagacattcaagaaatatatcatcacacacataaatagaggccttttcaaggttataa 16052835  T
Q  115 cgtggttgaggttaaggtggggtatatttgagaaagta 152  Q
    ||||  ||||| ||||||| | |||| || ||||||||    
T  16052836 cgtgactgaggataaggtgagatatagtttagaaagta 16052873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 4582203 - 4582306
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||  |||||||||||||||||||||||  |||| |||||| ||| || |||||||  ||| ||| | |||| ||| | ||||||||||||||    
T  4582203 ctgtcataccttaaattttgaccacttttctctatttttacacattttgttcatacttttaaaaccggaaatgtccgtcattttagacgaaatttcggca 4582302  T
Q  255 gaga 258  Q
    ||||    
T  4582303 gaga 4582306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22894996 - 22895054
Alignment:
Q  23 tgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 81  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||| ||| |||||||    
T  22894996 tgattgtacctttctatgagattgaagccattctaaacagacattcagggtatatatca 22895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 6670710 - 6670772
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacc-cattttattcgtatttttaaa 217  Q
    ||||||||||||||||||||||||||||| |||||  |||||  ||||||||||||||||||||    
T  6670710 ctgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 6670772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 28901797 - 28901869
Alignment:
Q  18 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac 91  Q
    ||||||||||||| ||| ||| ||||||||||| ||||||||||||| || ||||| ||||||| || ||||||    
T  28901797 tcatgtgattgtatcttgctacgagattgaagc-attctaaatagacttttaaggtatatatcatcacacacac 28901869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 304
Target Start/End: Complemental strand, 15061295 - 15061257
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctct 304  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  15061295 tacctcattttttattccgagtcgggccctcttttctct 15061257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 12844052 - 12844097
Alignment:
Q  266 tacctcat-ttttgattccgagtcgggccctctttcctctttattt 310  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||    
T  12844052 tacctcatattttggttccgagtcgggccctcttccctctttattt 12844097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 22156945 - 22156912
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctcttt 299  Q
    ||||||||||||||||||||||||| ||||||||    
T  22156945 tacctcatttttgattccgagtcggaccctcttt 22156912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 32006839 - 32006872
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctcttt 299  Q
    |||||||||||| |||||||||||||||||||||    
T  32006839 tacctcattttttattccgagtcgggccctcttt 32006872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 20028361 - 20028329
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||| ||||||||||||||||||||||||    
T  20028361 tacctcatatttgattccgagtcgggccctctt 20028329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 25766187 - 25766231
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttattt 310  Q
    |||||||||||| |||||||||| | ||||||| |||||||||||    
T  25766187 tacctcattttttattccgagtcagaccctcttccctctttattt 25766231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 25795681 - 25795725
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttattt 310  Q
    |||||||||||| |||||||||| | ||||||| |||||||||||    
T  25795681 tacctcattttttattccgagtcagaccctcttccctctttattt 25795725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 155 - 329
Target Start/End: Complemental strand, 14538671 - 14538490
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggc- 253  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  14538671 ctgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 14538572  T
Q  254 agagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagtgttt 329  Q
    | ||| |||||      ||||||||||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||||    
T  14538571 aaagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttatttcagtgttt 14538490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 156 - 311
Target Start/End: Original strand, 50824352 - 50824513
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  50824352 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 50824451  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttattta 311  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||  |||||| ||||    
T  50824452 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttcttta 50824513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 156 - 311
Target Start/End: Complemental strand, 50851508 - 50851347
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  50851508 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 50851409  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttattta 311  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||  |||||| ||||    
T  50851408 agaggttactttgaagtacctcattttttattccgagtcggaccctcttctctctttcttta 50851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 325
Target Start/End: Complemental strand, 27341401 - 27341224
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  27341401 ctgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggca 27341302  T
Q  255 gagaagttac------gtacctca-tttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    || | |||||      |||||||| ||||| |||||||||| ||||||||| |||||||||||  ||| |||||||||    
T  27341301 gaaaggttactttgaagtacctcatttttttattccgagtcaggccctcttccctctttattttctttctatttcagt 27341224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 41006555 - 41006712
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41006555 ctgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 41006654  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  41006655 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 41006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 41015335 - 41015492
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41015335 ctgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 41015434  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  41015435 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 41015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 8154710 - 8154553
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||    
T  8154710 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 8154611  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  8154610 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 8154553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 9525500 - 9525343
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||    
T  9525500 ctgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggca 9525401  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    || | |||||       |||||||||||| ||||||||||||||||||||| ||||||    
T  9525400 gaaaggttactttaaaatacctcattttttattccgagtcgggccctcttttctcttt 9525343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 156 - 304
Target Start/End: Complemental strand, 9555173 - 9555019
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||||||||||    
T  9555173 tgtcataccccaaattttgatcacttttctctattcttacccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcag 9555074  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctct 304  Q
    | | |||||       |||||||||||| ||||||||||||||||||||| ||||    
T  9555073 aaaggttactttaaaatacctcattttttattccgagtcgggccctcttttctct 9555019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 2211239 - 2211414
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||     
T  2211239 tgtcataccctaaattttgaccacttttctctattcttacctattttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggcaa 2211338  T
Q  256 agaag------ttacgtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |      | |  |||||||||||| |||||||||| |||||||||  ||||||||||  |||||||||||||    
T  2211339 agagggtattttaaaatacctcattttttattccgagtcaggccctcttctctctttattttctttttatttcagt 2211414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 28470282 - 28470187
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcg 251  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  28470282 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcg 28470187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 17933654 - 17933749
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttc 250  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  17933654 ctgtcataccccaaattttgaccaattttctctatttttacccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttc 17933749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 17919198 - 17919307
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| ||  |||||||||  ||||| ||||||||||| |     
T  17919198 ctgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtcg 17919297  T
Q  255 gagaagttac 264  Q
    |||| |||||    
T  17919298 gagaggttac 17919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 17628265 - 17628329
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtc 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtc 17628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 255
Target Start/End: Original strand, 21186747 - 21186846
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||| ||| |  ||| |||||||||||||| |||||||| || |||||||||| |||||| |||||||||||||||    
T  21186747 tgtcataccccaaattttgaccacttttatctgtttttatccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttcggcag 21186846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 43470615 - 43470510
Alignment:
Q  158 tcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagag 257  Q
    ||||||||||||||||||| |||||| |||||  |||||| |||||||||||||||||||| || |||||||  |||||||| |||||||||||||||||    
T  43470615 tcataccccaaattttgactactttt-tctatttttaccctttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagag 43470517  T
Q  258 aagttac 264  Q
    | |||||    
T  43470516 aggttac 43470510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 16816269 - 16816176
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaattt 249  Q
    ||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||||||||| ||| |||||||||  ||||| |||||||||    
T  16816269 ctgtcataccc-aaattttgaccacttttctctatttttactcattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattt 16816176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 18349560 - 18349658
Alignment:
Q  160 ataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagaga 258  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||||||||| ||||||| |||| ||| | |||||||| | ||||||||||||||||||    
T  18349560 ataccccaaattttgacaacttttctctatttttacacattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttcggcagaga 18349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 8197762 - 8197659
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||| |||||| |||||||  ||| ||| | |||||||| | || |||||||||||    
T  8197762 ctgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacaaaatttcggca 8197663  T
Q  255 gaga 258  Q
    ||||    
T  8197662 gaga 8197659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 30541 - 30443
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||| || ||| |||||||  ||| ||| | |||||||| | ||||||||||||||    
T  30541 tgtcataccccaaattttgaccacttttctctatttttacacattttgtttgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 30443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 11520814 - 11520659
Alignment:
Q  1 tttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacaccga---ag 96  Q
    |||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||| |||  ||||||||||||| |||||||  | |||||   |   ||    
T  11520814 tttgccacactctagtcgtcatatgattgtaccttgctatgagattgaagcaattataagcagacattcaaggtatatatcataacacacagacatagag 11520715  T
Q  97 gcattttcaaggttatcacgtggttgaggttaaggtggggtatatttgagaaagta 152  Q
    |  ||||||||||||| |||||| |||||| |||||||| |||||||  |||||||    
T  11520714 gacttttcaaggttataacgtggatgaggtaaaggtgggatatatttaggaaagta 11520659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 156 - 255
Target Start/End: Original strand, 18039011 - 18039110
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||||||||||| || | || |||   |||| |||||| |||||||||| ||||    
T  18039011 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgttgtttcagacgaaatttcagcag 18039110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 13509373 - 13509315
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcag 324  Q
    |||||||||||||||||||| |||||||||||| |||||||||||  ||||||||||||    
T  13509373 tacctcatttttgattccgaatcgggccctcttccctctttattttctttttatttcag 13509315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 304
Target Start/End: Complemental strand, 14881276 - 14881238
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctct 304  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  14881276 tacctcatttttgattccgagtcgggccctcttttctct 14881238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 13105598 - 13105558
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  13105598 tacctcatttttgattccgagtcggaccctcttttctcttt 13105558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 13111746 - 13111706
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  13111746 tacctcatttttgattccgagtcggaccctcttttctcttt 13111706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 48060685 - 48060645
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  48060685 tacctcattttttattccgagtcgggccctcttttctcttt 48060645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 304
Target Start/End: Complemental strand, 14893107 - 14893069
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctct 304  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  14893107 tacctcatttttgattccgagtcggcccctcttttctct 14893069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 183
Target Start/End: Complemental strand, 6959006 - 6958978
Alignment:
Q  155 ctgtcataccccaaattttgaccactttt 183  Q
    |||||||||||||||||||||||||||||    
T  6959006 ctgtcataccccaaattttgaccactttt 6958978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 9523728 - 9523684
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttattt 310  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||    
T  9523728 tacctcatttttggtttcgagtcgggccctcttctctctttattt 9523684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 14740103 - 14740071
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||| ||||||||||||||||||||||||    
T  14740103 tacctcatatttgattccgagtcgggccctctt 14740071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 10993 - 11167
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  10993 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 11092  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      |||||||| |||||||||||| ||||||||||||  ||||||||||  |||||||||||||    
T  11093 agaggttactttgaagtacctca-ttttgattccgaatcgggccctcttctctctttattttctttttatttcagt 11167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 29186343 - 29186168
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||     
T  29186343 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 29186244  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      || |||||||||| |||||||||||| |||| ||  ||||||||||  |||||||||||||    
T  29186243 agaggttactttgaagtgcctcattttttattccgagtcggacccttttctctctttattttatttttatttcagt 29186168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 24956912 - 24956755
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  24956912 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 24956813  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  24956812 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 24956755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 24965375 - 24965218
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  24965375 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 24965276  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  24965275 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 24965218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 20372979 - 20372805
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  20372979 ctgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgaca 20372880  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    |||| |||||      ||||||||||||| |||||||||||  |||||||  ||| ||||||  | |||||||||    
T  20372879 gagaggttactttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttca 20372805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 23350142 - 23349968
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  23350142 ctgtcataccccaaattttgaccatttttctctatttttacccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggca 23350043  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
     ||| |||||      ||||||||||||| ||||||||||||||||||||  ||||||||||  | |||||||||    
T  23350042 aagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttca 23349968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 323
Target Start/End: Complemental strand, 20398700 - 20398527
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  20398700 tgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacag 20398601  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    ||| |||||      ||||||||||||| |||||||||||  |||||||  ||| ||||||  | |||||||||    
T  20398600 agaggttactttgaagtacctcattttttattccgagtcgaaccctcttctctcattattttctctttatttca 20398527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 43598111 - 43597955
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||     
T  43598111 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43598012  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  43598011 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 43597955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 43603603 - 43603447
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||     
T  43603603 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43603504  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  43603503 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 43603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 43609095 - 43608939
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||     
T  43609095 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaa 43608996  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  43608995 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 43608939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 1728227 - 1728068
Alignment:
Q  153 tgctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcgg 252  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |     
T  1728227 tgctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttga 1728128  T
Q  253 cagagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    || ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  1728127 caaagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 1728068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 28852549 - 28852706
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||    
T  28852549 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggca 28852648  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  28852649 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 28852706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 28843940 - 28844096
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||     
T  28843940 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 28844039  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  28844040 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 28844096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 31410890 - 31411065
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||| ||     
T  31410890 tgtcataccccaaattttgaccacatttctctattctaacccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaa 31410989  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      ||||||||||||| ||||  ||||||||||||||  |||||||| |  |||||||||||||    
T  31410990 agaggttactttgaagtacctcattttttattctcagtcgggccctcttctctctttatcttctttttatttcagt 31411065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 31421789 - 31421965
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||| ||     
T  31421789 tgtcatacccaaaattttgaccacttttctctattcttacccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaa 31421888  T
Q  256 agaagttac------gtacctcatttttg-attccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      |||||||||||||| || || |||| | |||||||  ||||||||||  ||||||| |||||    
T  31421889 agatgttactttgaagtacctcatttttgaatgccaagtctgaccctcttctctctttattttctttttatatcagt 31421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 19223555 - 19223663
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||| ||||||||||| | ||||| ||| |||    
T  19223555 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaatctcgacag 19223654  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  19223655 agaggttac 19223663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 17027198 - 17027056
Alignment:
Q  12 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac--cgaaggcattttcaaggt 109  Q
    ||||| |||||||||||| |||| |||||| ||| |||||||| |||| ||||| ||||||| | ||||| || ||||||    ||||| |||| |||||    
T  17027198 cagtcgtcatgtgattgttccttcctatgacatttaagcaattataaacagacactcaaggtatttatcatcacacacacatataaggccttttaaaggt 17027099  T
Q  110 tatcacgtggttgaggttaaggtggggtatatttgagaaagta 152  Q
    ||| || || |||||||||||||||| || |||||||||||||    
T  17027098 tataacatgattgaggttaaggtgggatacatttgagaaagta 17027056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24841438 - 24841367
Alignment:
Q  1 tttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 71  Q
    |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  24841438 tttgtcacactttagtcatcatgtgattggaccttactatgagattgaagcaattctaaacaaacattcaag 24841367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 22754618 - 22754483
Alignment:
Q  12 cagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca----ccatacacaccgaaggcattttcaag 107  Q
    ||||| ||||||||||||||||| |||| ||||||||| ||||||||| || |||||||||| || ||||     || ||| || || | || |||||||    
T  22754618 cagtcgtcatgtgattgtaccttgctataagattgaagaaattctaaacaggcattcaaggtatacatcatttcacacacatacagaggaca-tttcaag 22754520  T
Q  108 gttatcacgtggttgaggttaaggtggggtatatttg 144  Q
    ||||| |||||| ||||||||||||||| || |||||    
T  22754519 gttataacgtggctgaggttaaggtgggataaatttg 22754483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 258
Target Start/End: Complemental strand, 41099838 - 41099739
Alignment:
Q  159 cataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagaga 258  Q
    ||||||||||||||||||||||||| |||||  |||| |||||  |||||| |||||||  ||| ||| | |||||||| | ||||||||||||| ||||    
T  41099838 cataccccaaattttgaccacttttatctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcggaga 41099739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11274790 - 11274871
Alignment:
Q  1 tttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 81  Q
    |||||||||||| |||  |||||||||| ||||||||||||| |||||||| |||| ||| | ||||||||||| |||||||    
T  11274790 tttgtcacactctagttgtcatgtgattttaccttactatgaaattgaagcgattccaaacaaacattcaaggtatatatca 11274871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 40014981 - 40015040
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctcttt--cctctttatttagtttttatttca 323  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||  |||||||||||    
T  40014981 tacctcatttttgattccgagtcgggccctcttttctctctttattttctttttatttca 40015040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19331244 - 19331160
Alignment:
Q  1 tttgtcacactc-agtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatcacca 84  Q
    |||||||||||| || | |||||||||| |||||| || |||||||||||||||| || | ||||||||||| |  |||||||||    
T  19331244 tttgtcacactccagccgtcatgtgattctaccttgctttgagattgaagcaattatatagagacattcaagatacatatcacca 19331160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 36454733 - 36454773
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  36454733 tacctcatttttgattccgagtcggaccctcttttctcttt 36454773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 20099606 - 20099569
Alignment:
Q  269 ctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  20099606 ctcatttttgattccgagtcggaccctcttttctcttt 20099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 37048448 - 37048481
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctcttt 299  Q
    |||||||||||| |||||||||||||||||||||    
T  37048448 tacctcattttttattccgagtcgggccctcttt 37048481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 15956940 - 15956900
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||| |||||||||||||||||||||||| |||| ||||||    
T  15956940 taccccatttttgattccgagtcgggcccgcttttctcttt 15956900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 36448355 - 36448395
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  36448355 taccttatttttgattccgagtcggaccctcttttctcttt 36448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 15944623 - 15944466
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  15944623 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 15944524  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  15944523 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 15944466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 35138592 - 35138749
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  35138592 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 35138691  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  35138692 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 35138749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 35146928 - 35147085
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  35146928 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 35147027  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  35147028 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 35147085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 41233910 - 41233753
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41233910 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 41233811  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  41233810 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 41233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 14582925 - 14583081
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  14582925 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 14583024  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  14583025 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 14583081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 15953137 - 15952981
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  15953137 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 15953038  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  15953037 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 15952981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 38168422 - 38168266
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  38168422 tgtcatactccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 38168323  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  38168322 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 38168266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 156 - 261
Target Start/End: Complemental strand, 17687463 - 17687358
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 17687364  T
Q  256 agaagt 261  Q
    ||||||    
T  17687363 agaagt 17687358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 42565995 - 42565838
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||    
T  42565995 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggca 42565896  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  42565895 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 42565838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 42574618 - 42574462
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||     
T  42574618 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 42574519  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  42574518 agaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 42574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 20372378 - 20372283
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcg 251  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  20372378 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcg 20372283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 325
Target Start/End: Original strand, 35037884 - 35038031
Alignment:
Q  184 ctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagagaagttac------gtacctcattttt 277  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| |||||       ||||||||||||    
T  35037884 ctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacctcattttt 35037983  T
Q  278 gattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
     |||||||||| ||||||||| |||||||||||  |||||||||||||    
T  35037984 tattccgagtcaggccctcttccctctttattttctttttatttcagt 35038031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 44372705 - 44372813
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||     
T  44372705 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaa 44372804  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  44372805 agaggttac 44372813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 44388616 - 44388724
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||     
T  44388616 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaa 44388715  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  44388716 agaggttac 44388724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 20621517 - 20621626
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||| || |||||||| ||    
T  20621517 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgaca 20621616  T
Q  255 gagaagttac 264  Q
     ||| |||||    
T  20621617 aagatgttac 20621626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 25483601 - 25483709
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||| |||    
T  25483601 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacag 25483700  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  25483701 agaggttac 25483709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 25491207 - 25491315
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||| |||    
T  25491207 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacag 25491306  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  25491307 agaggttac 25491315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 27606709 - 27606608
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||| |||||||||||| ||||||||||||  ||| | |||||||||||| |||||||| |||||||||| ||||| ||| |||||||||||||||    
T  27606709 tgtcatactccaaattttgactacttttctctatttttatcaattttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttcggcag 27606611  T
Q  256 aga 258  Q
    |||    
T  27606610 aga 27606608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 42249520 - 42249418
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||  |||||| ||||||| |||  ||| | |||||||| | |||||||||||||||    
T  42249520 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaatcgaaaatgtccgtcgttttagacgaaatttcggcag 42249421  T
Q  256 aga 258  Q
    |||    
T  42249420 aga 42249418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 35303737 - 35303844
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||| | ||||||||    |||||| |||||||| |||||| |||| |  ||| ||||||||||||| |||||||||||||||    
T  35303737 tgtcataccccaaattttgactatttttctctgattttaccccttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggcag 35303836  T
Q  256 agaagtta 263  Q
    ||| ||||    
T  35303837 agaggtta 35303844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 24285696 - 24285798
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||| |||  |||| |||||| |||||| |||||||   || ||||| |||||||| | |||||||||||| ||    
T  24285696 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaactggaaatttccgtcgtttaagacgaaatttcggtag 24285795  T
Q  256 aga 258  Q
    |||    
T  24285796 aga 24285798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 34070669 - 34070567
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||| |||||||||||||  |||| |||||| |||||| |||||||  ||| ||| | |||||||| | || ||||||||||||    
T  34070669 tgtcataccccaaattttgatcacttttctctatttttacacattttgttcgtacttttaaaaccggtaatgtccgtcgttttagacaaaatttcggcag 34070570  T
Q  256 aga 258  Q
    |||    
T  34070569 aga 34070567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 26903396 - 26903296
Alignment:
Q  158 tcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcagag 257  Q
    |||||||| |||||||||||||||||||||||  |||| |||||| |||||| |||||||  ||  ||| | | |||||| | |||||||||||||||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccgaaaatgtccatcgttttagacgaaatttcggcagag 26903297  T
Q  258 a 258  Q
    |    
T  26903296 a 26903296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 329
Target Start/End: Complemental strand, 17687357 - 17687307
Alignment:
Q  279 attccgagtcgggccctctttcctctttatttagtttttatttcagtgttt 329  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  17687357 attccgagccgggccctctttcctctttattttctttttatttcagtgttt 17687307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 24292371 - 24292433
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaa 217  Q
    ||||||||||||||||||||||||||||||| |||  |||| |||||| |||||| |||||||    
T  24292371 ctgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaa 24292433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 18248 - 18208
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  18248 tacctcatttttgattccgagtcggaccctcttttctcttt 18208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22389193 - 22389265
Alignment:
Q  1 tttgtcacactcagtcatcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggt 73  Q
    |||| ||||| ||||| |||||||| |||||||| |||||| ||||||| |||| |||| | |||||||||||    
T  22389193 tttgccacacccagtcgtcatgtgactgtaccttgctatgaaattgaagtaattataaacaaacattcaaggt 22389265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 36735439 - 36735479
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  36735439 tacctcatttttgattccgagtcggaccctcttttctcttt 36735479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39730165 - 39730111
Alignment:
Q  1 tttgtcacactca-gtcatcatgtgattgtaccttactatgagattgaagcaatt 54  Q
    |||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||    
T  39730165 tttgccacactcaagtcatcgtgtgattgtacattactatgagattgatgcaatt 39730111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 20279293 - 20279260
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctcttt 299  Q
    ||||||| ||||||||||||||||||||||||||    
T  20279293 tacctcaattttgattccgagtcgggccctcttt 20279260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 11873790 - 11873849
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctcttt--cctctttatttagtttttatttca 323  Q
    |||||||||||| |||||||||||| ||||||||   ||||||||||  |||||||||||    
T  11873790 tacctcatttttcattccgagtcggaccctcttttctctctttattttctttttatttca 11873849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 3e-51; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 31548522 - 31548679
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  31548522 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 31548621  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
      || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  31548622 aggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 31548679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 31539954 - 31540110
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||     
T  31539954 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 31540053  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  31540054 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 31540110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 35104129 - 35103973
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||     
T  35104129 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaa 35104030  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     || |||||      |||||||||||||||||||||||||| |||||||| ||||||    
T  35104029 ggaggttactttgaagtacctcatttttgattccgagtcggaccctcttttctcttt 35103973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 3432956 - 3432799
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||    
T  3432956 ctgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 3432857  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
     ||| |||||      ||||||||||||| |||||||||||| |||||||| ||||||    
T  3432856 aagaggttactttgaagtacctcattttttattccgagtcggaccctcttttctcttt 3432799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 156 - 325
Target Start/End: Complemental strand, 32137819 - 32137644
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||     
T  32137819 tgtcttaccccaaattttgatcacttttctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaa 32137720  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    | |||||||      ||||||||||||| ||||||||||||||||||||  ||||||||||  | |||||||||||    
T  32137719 ataagttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctctttatttcagt 32137644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 156 - 329
Target Start/End: Complemental strand, 41746758 - 41746578
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggc-a 254  Q
    ||||||| |||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| |    
T  41746758 tgtcatatcccaaattttgaccacttttatctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcaa 41746659  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagtgttt 329  Q
     ||| |||||      ||||||||||||| ||||||||||||||||||||  ||||||||||  ||||||||| |||||||    
T  41746658 aagaggttactttgaagtacctcattttttattccgagtcgggccctcttctctctttattttctttttatttgagtgttt 41746578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 29221554 - 29221451
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||   ||||| ||||||||||||||    
T  29221554 ctgtcataccccaaattttgactacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggca 29221455  T
Q  255 gaga 258  Q
    ||||    
T  29221454 gaga 29221451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23223194 - 23223131
Alignment:
Q  18 tcatgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtctatatca 81  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    
T  23223194 tcatgtgattgtaccttgctatgagattaaagcaattctaaatagacattcaaggtatatatca 23223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 21498963 - 21498861
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||  |||||| |||||||  ||| ||| | |||||||| | |||||||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcag 21498864  T
Q  256 aga 258  Q
    |||    
T  21498863 aga 21498861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 44320257 - 44320149
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||  |  |||||||||||||||||||||| || | || |||   ||||||||||| |||||||||| ||||    
T  44320257 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcag 44320158  T
Q  256 agaagttac 264  Q
     || |||||    
T  44320157 ggaggttac 44320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 51058450 - 51058353
Alignment:
Q  158 tcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcaga 256  Q
    |||||||||||||||||| ||||||||| | | || |  ||||||||||||||||||||||  |||||||||||| |||||| |||||||||| |||||    
T  51058450 tcataccccaaattttgatcacttttctttgttct-attcattttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaatttcagcaga 51058353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 13450139 - 13450198
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||  |||||||||||||    
T  13450139 tacctcatttttgattccgagtcgggctctcttctctctttattttctttttatttcagt 13450198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 28457556 - 28457664
Alignment:
Q  158 tcataccccaaattttgaccacttttctc-tatccttacccatttta-ttcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||||| | |  |||||||||||| || ||||||| || | |  |||   ||||||||||| ||||||||||| |||    
T  28457556 tcataccccaaattttgaccacttttctcgtttttttacccattttattttgtattttaaacgccaagaaggatcgtcgtttcagacgaaatttcgacag 28457655  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  28457656 agaggttac 28457664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 31313072 - 31313020
Alignment:
Q  20 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaagg 72  Q
    |||| |||||||||| |||||||||| || |||||||||||||||| ||||||    
T  31313072 atgttattgtaccttgctatgagattaaaccaattctaaatagacaatcaagg 31313020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 47108478 - 47108518
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  47108478 tacctcattttttattccgagtcgggccctcttttctcttt 47108518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 27754837 - 27754786
Alignment:
Q  20 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaag 71  Q
    |||||||||||| ||||||||| |||||| |||||||||| ||| |||||||    
T  27754837 atgtgattgtacgttactatgatattgaaacaattctaaacagaaattcaag 27754786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 31313107 - 31313161
Alignment:
Q  20 atgtgattgtaccttactatgagattgaagcaattctaaatagacattcaaggtc 74  Q
    |||| |||||||||   ||||||||| ||||||||||||||||||| ||||||||    
T  31313107 atgttattgtacctggttatgagattaaagcaattctaaatagacaatcaaggtc 31313161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 20314092 - 20314059
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctat 189  Q
    |||||||||||||||||||||||||||| |||||    
T  20314092 tgtcataccccaaattttgaccacttttttctat 20314059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 1961742 - 1961782
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  1961742 tacctcattttttattccgagtcggaccctcttttctcttt 1961782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 18098481 - 18098521
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  18098481 tacctcattttttattccgagtcggaccctcttttctcttt 18098521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 20429459 - 20429499
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  20429459 tacctcatttttgattccgagtcagaccctcttttctcttt 20429499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 20518385 - 20518429
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttattt 310  Q
    |||||||||||||| ||||||||||||| ||||  ||||||||||    
T  20518385 tacctcatttttgaatccgagtcgggccttcttctctctttattt 20518429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Original strand, 39454485 - 39454517
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||||||||| ||||||||||||||||||    
T  39454485 tacctcatttttgaatccgagtcgggccctctt 39454517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 44832515 - 44832475
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  44832515 tacctcattttttattccgagtcggaccctcttttctcttt 44832475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 156 - 329
Target Start/End: Original strand, 33035 - 33214
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||     
T  33035 tgtcataccccaaattttgaccacttttctctattcttacccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaa 33134  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttatttcagtgttt 329  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||   |||||||||  | ||||||||| |||||    
T  33135 agaggttactttaaagtacctcattttttattccgagtcggaccctcttctttctttattttctctttatttcattgttt 33214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 155 - 321
Target Start/End: Original strand, 23463 - 23636
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgta-tttttaaagtcgggaattttcgtcgtttcatacgaaatttcggc 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||||  ||||||||||||     
T  23463 ctgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggt 23562  T
Q  254 agagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttattt 321  Q
    ||||| |||||      |||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  23563 agagaggttactttgaagtacctcatttttgattccgagtcgggccctcttccctctttgttttctttttattt 23636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 321
Target Start/End: Complemental strand, 995 - 823
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  995 ctgtcataccccaaattttgaccagctttctctattcttacccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggca 896  T
Q  255 gagaagttac------gtacctcatttttgattccgagtcgggccctctttcctctttatttagtttttattt 321  Q
    || | |||||       |||||||||||||||||||||||||||||||||  ||||||||||  |||||||||    
T  895 gaaaggttactttgaaatacctcatttttgattccgagtcgggccctcttctctctttattttctttttattt 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 121228 - 121375
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  121228 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtag 121327  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctct 297  Q
    ||| |||||      |||  |||||||||||||||||||| |||||||    
T  121328 agaggttactttgaagtaaatcatttttgattccgagtcgagccctct 121375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 156 - 306
Target Start/End: Original strand, 15813 - 15970
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  15813 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 15912  T
Q  256 agaagttac------gtacctca-tttttgattccgagtcgggccctctttcctcttt 306  Q
    ||| |||||      |||||||| ||||||||||| |||| |||||||||| ||||||    
T  15913 agaggttactttgaagtacctcattttttgattccaagtcaggccctcttttctcttt 15970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 156 - 325
Target Start/End: Original strand, 4390 - 4566
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||   |||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||||| |||    
T  4390 tgtcataccccaaattttgacattttttctctattcttacccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacag 4489  T
Q  256 agaagttac------gtacctca-tttttgattccgagtcgggccctctttcctctttatttagtttttatttcagt 325  Q
    ||| |||||      |||||||| ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||    
T  4490 agaggttactttgaagtacctcatttttttattccgagtcgggccctcttctctctttattttctttttatttcagt 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 156 - 298
Target Start/End: Complemental strand, 149 - 1
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||     
T  149 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 50  T
Q  256 agaagttac------gtacctcatttttgattccgagtcgggccctctt 298  Q
    ||| |||||      ||||||||||||| |||||||||||| |||||||    
T  49 agaggttactttgaagtacctcattttttattccgagtcggaccctctt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 40898 - 40790
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| | |||||| |||||||| ||||||| ||| ||     
T  40898 tgtcataccccaaattttgaccacttttctctattcttatccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaatctcgacaa 40799  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  40798 agaggttac 40790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 139 - 234
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcg 251  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| | | |||||||||  ||||| |||||||||||    
T  139 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcg 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 20547 - 20439
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggcag 255  Q
    |||||||||||||||||||||||||||||| |    |||| |||||| |||||| |||||||| || |||||||||| |||||| |||||||||||||||    
T  20547 tgtcataccccaaattttgaccacttttctatggttttacacattttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggcag 20448  T
Q  256 agaagttac 264  Q
    ||| |||||    
T  20447 agaggttac 20439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 7255 - 7159
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcgg 252  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||| ||| |||||||| || |||||||||| |||||| ||||||||||||    
T  7255 tgtcataccctaaattttgaccacttttctctgtttttacccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcgg 7159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 192526 - 192630
Alignment:
Q  154 gctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggc 253  Q
    ||||||||||||||||||||||||||||||||||||  ||||  ||||| |||||| |||||||  ||| ||| | |||||||| | |||||||||| ||    
T  192526 gctgtcataccccaaattttgaccacttttctctatttttacagattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcagc 192625  T
Q  254 agaga 258  Q
    |||||    
T  192626 agaga 192630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 438 - 335
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||| |||  |||| |||||| |||||| |||||||  ||| ||| | | |||||| | ||||||||||||||    
T  438 ctgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaatttcggca 339  T
Q  255 gaga 258  Q
    ||||    
T  338 gaga 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 65604 - 65501
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||  |||||||||||||  |||| |||||| |||||| |||||||  ||| ||| | |||||||| | ||||||||||||||    
T  65604 ctgtcataccccaaattttgtacacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 65505  T
Q  255 gaga 258  Q
    ||||    
T  65504 gaga 65501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 81852 - 81749
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||| |||||||||||||||||||||||  |||| |||||| |||||| |||||||  ||| ||| | |||||||| | ||||||||| ||||    
T  81852 ctgtcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaattttggca 81753  T
Q  255 gaga 258  Q
    ||||    
T  81752 gaga 81749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 7694 - 7622
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattt 228  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||    ||||||||||| |||||||    
T  7694 tgtcataccccaaattttgaccacttttctctattcttacccatttttttgcattttttaaagtcaggaattt 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 415 - 518
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||| ||||||||||||||||||| ||   |||| |||||| |||||| |||||||  ||| ||| | |||||||| | ||||||||||||||    
T  415 ctgtcataccctaaattttgaccacttttctttaattttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggca 514  T
Q  255 gaga 258  Q
    ||||    
T  515 gaga 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 438 - 340
Alignment:
Q  156 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcatacgaaatttcggca 254  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||| |||||| |||||||  ||| ||| | | |||||| | ||||||||| ||||    
T  438 tgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaaaccggaaatgtccatcgttttagacgaaattttggca 340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1487 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 801 - 762
Alignment:
Q  163 ccccaaattttgaccacttttctctatccttacccatttt 202  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  801 ccccaaattttgaccacttttctctattcttacccatttt 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 10974 - 10912
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatccttacc-cattttattcgtatttttaaa 217  Q
    ||||||||||||||||||||||||||||| |||||  |||||  ||||||||||||||||||||    
T  10974 ctgtcataccccaaattttgaccactttt-tctatttttaccaaattttattcgtatttttaaa 10912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0990 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0990
Description:

Target: scaffold0990; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 3127 - 3075
Alignment:
Q  39 tgagattgaagcaattctaaatagacattcaaggtctatatcaccatacacac 91  Q
    |||||||||||||||| |||||||||||| ||||| ||||||| || ||||||    
T  3127 tgagattgaagcaattataaatagacattgaaggtatatatcatcacacacac 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 65744 - 65708
Alignment:
Q  155 ctgtcataccccaaattttgaccacttttctctatcc 191  Q
    ||||||||||| |||||||||||||||||||||||||    
T  65744 ctgtcataccctaaattttgaccacttttctctatcc 65708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Original strand, 23688 - 23728
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctcttt 306  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  23688 tacctcattttttattccgagtcggaccctcttttctcttt 23728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 17669 - 17619
Alignment:
Q  273 tttttgattccgagtcgggccctctttcctctttatttagtttttatttca 323  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||    
T  17669 ttttttattccgagtcgggccctcttctctctttattttctttttatttca 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 8084 - 8122
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctct 304  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  8084 tacctcatctttgattccgagtcgggccctcttttctct 8122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 9233 - 9201
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||||||||| ||||||||||||||||||    
T  9233 tacctcatttttgaatccgagtcgggccctctt 9201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 291 - 259
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||| ||||||||||||||||||||||||    
T  291 tacctcatatttgattccgagtcgggccctctt 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 9053 - 9021
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctt 298  Q
    |||||||| ||||||||||||||||||||||||    
T  9053 tacctcatatttgattccgagtcgggccctctt 9021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 4862 - 4906
Alignment:
Q  266 tacctcatttttgattccgagtcgggccctctttcctctttattt 310  Q
    |||||||||||||| ||||||||||||||| ||  ||||||||||    
T  4862 tacctcatttttgaatccgagtcgggcccttttctctctttattt 4906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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