View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6860_high_21 (Length: 454)
Name: NF6860_high_21
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6860_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 24 - 442
Target Start/End: Complemental strand, 33711653 - 33711236
Alignment:
| Q |
24 |
aaatgttgcatgtaaaaaataatacttgacctatatcagtactccacgtcatcacatacatcctcttctactcttcattttatagtaaaaaatactatat |
123 |
Q |
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|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711653 |
aaatgttgcatgtaaaaaataatatttgacctataccagtactccacgtcatcacatacatcctcttctactcttcattttatagtaaaaaatactatat |
33711554 |
T |
|
| Q |
124 |
aaattgtatagctttcagaatatgatagaaaaatgaattgagagaagaatgaagttttggtcaatggcttgtaaagcaaagaaagtgtgatgtgaaatgt |
223 |
Q |
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|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711553 |
aa-ttgcatagctttcagaatatgatagaaaaatgaattgagagaagaatgaagttttggtcaatggcttgtaaagcaaagaaagtgtgatgtgaaatgt |
33711455 |
T |
|
| Q |
224 |
gacatttattcaatcatacatatttgaagcttctgagagtcttggaaattgagatatttttccaactggttttgcctctttggtagggagcaagaaagtg |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711454 |
gacatttattcaatcatacatatttgaagcttctgagagtcttggaaattgagatatttttccaactggttttgcctctttggtagggagcaagaaagtg |
33711355 |
T |
|
| Q |
324 |
aaagagcaatccaagaaactgtttttagtgtttgaattcttcttgagttgagtgcagttttgaattcaacatggccaccttgaataaccatcataacaga |
423 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711354 |
aaagagcaatccaagaaactgtttttagcgtttgaattcttcttgagttgagtgcagttttgaattcaacatggccaccttgaataaccatcataacaga |
33711255 |
T |
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| Q |
424 |
aacacacaaccacaggttc |
442 |
Q |
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||||||||||||||||||| |
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| T |
33711254 |
aacacacaaccacaggttc |
33711236 |
T |
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