View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6860_high_36 (Length: 352)

Name: NF6860_high_36
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6860_high_36
NF6860_high_36
[»] chr2 (29 HSPs)
chr2 (15-333)||(11072897-11073215)
chr2 (215-310)||(4026900-4026994)
chr2 (215-326)||(4090447-4090558)
chr2 (216-287)||(25836730-25836800)
chr2 (217-319)||(38215988-38216086)
chr2 (218-283)||(887414-887478)
chr2 (214-317)||(13097883-13097988)
chr2 (215-317)||(2790087-2790190)
chr2 (214-294)||(34913406-34913485)
chr2 (215-294)||(33321329-33321407)
chr2 (215-317)||(33321420-33321522)
chr2 (214-317)||(21788424-21788527)
chr2 (219-318)||(8832421-8832522)
chr2 (215-267)||(36501532-36501583)
chr2 (217-319)||(755761-755862)
chr2 (217-311)||(13056346-13056440)
chr2 (219-287)||(11776982-11777049)
chr2 (216-319)||(29774710-29774813)
chr2 (215-250)||(12223886-12223921)
chr2 (216-283)||(12238501-12238567)
chr2 (215-317)||(38471808-38471910)
chr2 (219-250)||(39592283-39592314)
chr2 (214-244)||(1120325-1120355)
chr2 (218-267)||(12442831-12442879)
chr2 (221-316)||(37419987-37420081)
chr2 (214-287)||(43787819-43787891)
chr2 (215-306)||(5903511-5903602)
chr2 (240-317)||(27703500-27703574)
chr2 (214-250)||(44475539-44475575)
[»] chr5 (53 HSPs)
chr5 (214-319)||(42851987-42852092)
chr5 (215-317)||(24030182-24030284)
chr5 (221-307)||(22201959-22202045)
chr5 (214-321)||(1576594-1576700)
chr5 (214-321)||(1608115-1608221)
chr5 (215-317)||(12987031-12987133)
chr5 (215-317)||(13060619-13060721)
chr5 (214-312)||(17128250-17128348)
chr5 (219-305)||(29922210-29922296)
chr5 (215-287)||(10537236-10537307)
chr5 (215-283)||(28625482-28625549)
chr5 (217-280)||(12467269-12467331)
chr5 (214-316)||(17868192-17868295)
chr5 (215-316)||(1473324-1473425)
chr5 (215-319)||(2878693-2878797)
chr5 (219-328)||(11163290-11163399)
chr5 (218-283)||(41059809-41059873)
chr5 (215-280)||(41534628-41534692)
chr5 (217-283)||(42706798-42706863)
chr5 (218-270)||(1868861-1868912)
chr5 (215-275)||(3977485-3977544)
chr5 (215-271)||(31637111-31637166)
chr5 (215-283)||(40452495-40452562)
chr5 (215-317)||(3520520-3520621)
chr5 (215-250)||(41419535-41419570)
chr5 (215-281)||(17657246-17657311)
chr5 (221-282)||(43268644-43268704)
chr5 (218-317)||(1372013-1372112)
chr5 (214-250)||(2577445-2577481)
chr5 (258-321)||(10537132-10537196)
chr5 (214-294)||(11706934-11707013)
chr5 (214-317)||(15413959-15414062)
chr5 (217-315)||(14243792-14243890)
chr5 (259-321)||(29922095-29922158)
chr5 (259-321)||(35536961-35537024)
chr5 (259-317)||(40697123-40697182)
chr5 (217-316)||(42558740-42558837)
chr5 (218-319)||(341955-342056)
chr5 (221-283)||(1943012-1943073)
chr5 (219-316)||(2670043-2670140)
chr5 (216-246)||(39154779-39154809)
chr5 (221-283)||(40697003-40697064)
chr5 (215-316)||(43318971-43319072)
chr5 (217-262)||(5559941-5559985)
chr5 (217-270)||(6144753-6144805)
chr5 (214-287)||(7364325-7364397)
chr5 (259-319)||(13739346-13739407)
chr5 (215-319)||(15122510-15122613)
chr5 (218-326)||(26002955-26003063)
chr5 (259-319)||(35083356-35083417)
chr5 (215-248)||(35536881-35536914)
chr5 (214-294)||(22573644-22573723)
chr5 (215-318)||(33757054-33757156)
[»] chr4 (42 HSPs)
chr4 (220-317)||(23297405-23297502)
chr4 (215-319)||(43699500-43699604)
chr4 (214-321)||(38345838-38345944)
chr4 (215-316)||(35124355-35124456)
chr4 (218-317)||(29877606-29877705)
chr4 (218-321)||(3564183-3564286)
chr4 (217-282)||(28074368-28074432)
chr4 (214-317)||(42611884-42611987)
chr4 (215-283)||(7148774-7148841)
chr4 (215-287)||(12495661-12495734)
chr4 (218-319)||(18424297-18424398)
chr4 (215-318)||(32628747-32628847)
chr4 (214-319)||(40699321-40699426)
chr4 (214-283)||(896972-897040)
chr4 (216-316)||(1374381-1374481)
chr4 (215-315)||(8130457-8130557)
chr4 (217-319)||(948037-948139)
chr4 (217-283)||(488403-488468)
chr4 (214-294)||(212964-213042)
chr4 (214-294)||(41228894-41228973)
chr4 (215-283)||(48591441-48591508)
chr4 (215-250)||(17222863-17222898)
chr4 (215-250)||(28663607-28663642)
chr4 (215-316)||(27368169-27368270)
chr4 (215-283)||(825684-825751)
chr4 (218-250)||(21216348-21216380)
chr4 (215-283)||(23335644-23335711)
chr4 (219-283)||(36740906-36740969)
chr4 (215-283)||(52274137-52274204)
chr4 (214-319)||(7206602-7206707)
chr4 (216-283)||(8601203-8601269)
chr4 (259-321)||(48591330-48591393)
chr4 (216-270)||(4331352-4331405)
chr4 (215-269)||(46704287-46704340)
chr4 (217-326)||(52700563-52700671)
chr4 (277-318)||(12023073-12023114)
chr4 (217-250)||(29997329-29997362)
chr4 (216-319)||(30956648-30956751)
chr4 (215-319)||(33533893-33533997)
chr4 (259-319)||(34633364-34633425)
chr4 (259-319)||(42153070-42153131)
chr4 (214-317)||(2702731-2702834)
[»] chr1 (41 HSPs)
chr1 (214-319)||(4068080-4068185)
chr1 (228-319)||(391133-391225)
chr1 (215-319)||(18327489-18327593)
chr1 (214-316)||(26946120-26946223)
chr1 (214-317)||(37712035-37712137)
chr1 (215-283)||(6337773-6337840)
chr1 (220-317)||(1265715-1265812)
chr1 (217-270)||(15515366-15515418)
chr1 (215-316)||(28689970-28690073)
chr1 (215-315)||(35590099-35590199)
chr1 (215-283)||(3069871-3069938)
chr1 (215-275)||(26988158-26988217)
chr1 (215-283)||(48819301-48819368)
chr1 (214-319)||(13038912-13039017)
chr1 (217-283)||(45267467-45267532)
chr1 (214-294)||(9572800-9572880)
chr1 (215-280)||(37329429-37329493)
chr1 (215-275)||(16888983-16889041)
chr1 (215-271)||(41196727-41196782)
chr1 (216-283)||(1005342-1005408)
chr1 (215-250)||(23544825-23544860)
chr1 (221-327)||(35897646-35897752)
chr1 (217-287)||(1565401-1565470)
chr1 (217-283)||(31378770-31378835)
chr1 (214-322)||(16225471-16225578)
chr1 (214-283)||(36422997-36423065)
chr1 (216-319)||(26435193-26435295)
chr1 (259-317)||(47413489-47413548)
chr1 (217-287)||(10082248-10082317)
chr1 (217-275)||(10850090-10850147)
chr1 (222-283)||(26936861-26936920)
chr1 (217-307)||(28122594-28122683)
chr1 (215-316)||(32497289-32497389)
chr1 (214-287)||(35282610-35282682)
chr1 (214-321)||(46473057-46473164)
chr1 (217-270)||(46501020-46501072)
chr1 (215-287)||(20169262-20169333)
chr1 (217-316)||(37148112-37148211)
chr1 (217-316)||(37156937-37157036)
chr1 (289-317)||(38781211-38781239)
chr1 (214-250)||(39941544-39941580)
[»] chr7 (23 HSPs)
chr7 (221-317)||(40629440-40629535)
chr7 (218-317)||(38372525-38372624)
chr7 (218-319)||(29390570-29390671)
chr7 (215-318)||(30181516-30181619)
chr7 (214-294)||(44613489-44613568)
chr7 (217-319)||(34922896-34922998)
chr7 (217-317)||(18837189-18837289)
chr7 (217-316)||(37779303-37779395)
chr7 (214-321)||(35809053-35809160)
chr7 (214-287)||(20888571-20888644)
chr7 (215-283)||(29378647-29378714)
chr7 (215-283)||(47511045-47511112)
chr7 (221-317)||(26331778-26331874)
chr7 (216-319)||(7098118-7098221)
chr7 (214-266)||(14691315-14691366)
chr7 (214-317)||(22032729-22032832)
chr7 (217-280)||(41094223-41094285)
chr7 (217-283)||(41037755-41037819)
chr7 (259-319)||(29378762-29378823)
chr7 (214-250)||(17944687-17944723)
chr7 (215-287)||(21027530-21027601)
chr7 (215-287)||(23356508-23356579)
chr7 (214-250)||(31613681-31613717)
[»] chr3 (26 HSPs)
chr3 (216-317)||(22809211-22809313)
chr3 (214-316)||(53218056-53218158)
chr3 (217-326)||(40581096-40581205)
chr3 (215-317)||(34707730-34707832)
chr3 (217-318)||(2086710-2086811)
chr3 (215-283)||(43079951-43080018)
chr3 (215-317)||(29270328-29270430)
chr3 (217-275)||(52421160-52421217)
chr3 (214-283)||(3870242-3870310)
chr3 (213-321)||(4974274-4974382)
chr3 (215-317)||(3845822-3845924)
chr3 (215-317)||(10448741-10448843)
chr3 (252-321)||(23555447-23555517)
chr3 (217-283)||(52021248-52021313)
chr3 (217-317)||(21296733-21296833)
chr3 (214-283)||(40240593-40240661)
chr3 (215-317)||(28741231-28741333)
chr3 (214-319)||(584985-585090)
chr3 (215-318)||(10272088-10272189)
chr3 (214-283)||(51409395-51409463)
chr3 (215-275)||(10521164-10521223)
chr3 (215-275)||(10667408-10667467)
chr3 (260-317)||(50022017-50022075)
chr3 (214-287)||(3876279-3876351)
chr3 (215-316)||(7292649-7292749)
chr3 (216-280)||(5129833-5129896)
[»] chr8 (23 HSPs)
chr8 (214-316)||(32131408-32131510)
chr8 (215-274)||(35168458-35168516)
chr8 (214-283)||(28879060-28879128)
chr8 (215-280)||(10298943-10299007)
chr8 (214-283)||(32975689-32975757)
chr8 (215-283)||(35453412-35453479)
chr8 (216-317)||(14942391-14942492)
chr8 (217-287)||(35285926-35285995)
chr8 (218-283)||(34286583-34286647)
chr8 (219-283)||(32213043-32213106)
chr8 (235-321)||(13131393-13131479)
chr8 (217-283)||(38895661-38895726)
chr8 (214-321)||(30973952-30974059)
chr8 (214-283)||(41145411-41145482)
chr8 (221-280)||(13265489-13265547)
chr8 (215-250)||(14709553-14709588)
chr8 (216-321)||(42363335-42363439)
chr8 (214-283)||(2669650-2669718)
chr8 (216-280)||(1089018-1089081)
chr8 (261-324)||(10213814-10213878)
chr8 (214-294)||(16706116-16706195)
chr8 (259-319)||(25671799-25671859)
chr8 (216-319)||(42102072-42102174)
[»] chr6 (26 HSPs)
chr6 (214-316)||(7267743-7267845)
chr6 (217-317)||(25430785-25430882)
chr6 (214-283)||(2034245-2034313)
chr6 (221-317)||(3211024-3211120)
chr6 (216-316)||(8014757-8014856)
chr6 (218-317)||(24625818-24625917)
chr6 (217-283)||(21025246-21025311)
chr6 (218-287)||(30533978-30534046)
chr6 (217-281)||(1240630-1240693)
chr6 (214-317)||(6632626-6632729)
chr6 (218-294)||(6758618-6758693)
chr6 (217-319)||(9894731-9894833)
chr6 (215-327)||(10873942-10874053)
chr6 (217-283)||(10054383-10054448)
chr6 (217-283)||(10755299-10755364)
chr6 (214-319)||(21891354-21891459)
chr6 (221-321)||(35111358-35111458)
chr6 (214-318)||(10687273-10687380)
chr6 (215-294)||(2255725-2255803)
chr6 (215-250)||(13429489-13429524)
chr6 (235-312)||(9201768-9201845)
chr6 (215-284)||(2027193-2027261)
chr6 (191-219)||(507330-507358)
chr6 (222-317)||(21871308-21871402)
chr6 (215-283)||(29052335-29052402)
chr6 (259-326)||(35071329-35071397)
[»] scaffold0157 (1 HSPs)
scaffold0157 (215-287)||(24743-24816)
[»] scaffold0012 (1 HSPs)
scaffold0012 (217-327)||(178457-178567)
[»] scaffold0024 (1 HSPs)
scaffold0024 (215-283)||(97223-97290)
[»] scaffold0041 (1 HSPs)
scaffold0041 (217-280)||(109011-109073)
[»] scaffold0057 (2 HSPs)
scaffold0057 (217-287)||(43835-43904)
scaffold0057 (214-287)||(24405-24476)
[»] scaffold0332 (1 HSPs)
scaffold0332 (218-283)||(14766-14830)


Alignment Details
Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 15 - 333
Target Start/End: Complemental strand, 11073215 - 11072897
Alignment:
Q  15 agaatatcaaagatcgtgaggcatccattaccgcgaccactatataaaaccctaatatactaactccaaaacagagtaaaaataagagttgacctaacac 114  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11073215 agaatatcaaagatcgtgaggcaaccattaccgtgaccactatataaaaccctaatatactaactccgaaacagagtaaaaataagagttgacctaacac 11073116  T
Q  115 ccaatgtaatcgttttatctaatnnnnnnnccctagtgtatataacaagcaatgtgaaattatgcaaacataaaaaacttagggcctgtttggattggct 214  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11073115 ccaatgtaatcgttttatctaataaaaaaaccctagtgtatataacaagcaatgtgaaattatgcaaacataaaaaacttagggcctgtttggattggct 11073016  T
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagccaatcca 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11073015 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactaaaaaataagccaatcca 11072916  T
Q  315 aacggactcttatagaagt 333  Q
    |||||||||||||||||||    
T  11072915 aacggactcttatagaagt 11072897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 4026994 - 4026900
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaa 310  Q
    ||||||||||||||||||||||||||||||||||   |||||| |||||||||||| |||| |||||| |||| |||||| ||||||||||||||||    
T  4026994 tgttttttcataaactaccttgacaagcttatga--taatacataaaagcttatttatttgcataagcagttttgcataagctcaaaaataagccaa 4026900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 326
Target Start/End: Complemental strand, 4090558 - 4090447
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||  |||||||||||||| |||||||| ||||||  |||| |||||| |||| ||||||||||| |||||| ||||||||||||||||| |    
T  4090558 tgttttttcattgactaccttgacaagattatgaat-aatacatcaaagtttatttatttgcataagctgttttgcataagctcaaaaataagccaattc 4090460  T
Q  314 aaacggactctta 326  Q
    | |||| ||||||    
T  4090459 agacgggctctta 4090447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 25836730 - 25836800
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||| |||||||||||    
T  25836730 gttttttcataaactaccttgacaagcttatgaat-aatacataaaagcatatttatttgcataagctgttt 25836800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 38216086 - 38215988
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||    |||||| |||| ||||||||||| |||||| |||||||||||| ||||||||    
T  38216086 ttttttcctaaactaccttgacaagcttatgaat-aatacataa----ttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaa 38215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 887478 - 887414
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  887478 ttttacataaactaccttgacaagcttatgaat-aatacaaaaaagcttatttatttgcataagct 887414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 13097988 - 13097883
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagc-ttatttgtttggataagctgtttagcataa-ctcaaaaataagccaat 311  Q
    |||||||||||||||| || ||||||||||||||||  ||||||  ||||| || ||| |||  ||||||||||| |||||| |||||||||||||||||    
T  13097988 ttgttttttcataaacaactttgacaagcttatgaaataatacatcaaagctttttttttttccataagctgttttgcataagctcaaaaataagccaat 13097889  T
Q  312 ccaaac 317  Q
    ||||||    
T  13097888 ccaaac 13097883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 2790087 - 2790190
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagc-ttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||| |||||||| ||||||||||||||||| ||| ||| || |||||| |||||| |||| ||||||||||| |||||| |||||||||||||||| |    
T  2790087 tgtttattcataaaataccttgacaagcttatcaat-aatgcataaaagctttatttatttgcataagctgttttgcataagctcaaaaataagccaacc 2790185  T
Q  313 caaac 317  Q
    |||||    
T  2790186 caaac 2790190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 34913406 - 34913485
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||| |||||||||||| |||| ||||||||||| ||||||    
T  34913406 ttgttttttcataaactatcttaacaaacttatgaat-aatacataaaagcttatttatttgcataagctgttttgcataa 34913485  T

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Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 33321329 - 33321407
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||| | ||| ||||| ||||||    
T  33321329 tgttttttcataaactaccttgacaagcttatgaat-aagacataaaagcttatttatttgcacaagttgttttgcataa 33321407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 33321420 - 33321522
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||| |||| || |||| ||||| ||||| |||||| || ||||||||| |||||     
T  33321420 tgttttttcataaactaccttgacaagcttatgagt-aatacataaaaacttaattatttgcataagttgttttgcataagctaaaaaataagtcaatcg 33321518  T
Q  314 aaac 317  Q
    ||||    
T  33321519 aaac 33321522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 21788527 - 21788424
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagc-caat 311  Q
    |||||||||||||||||| ||| |||||||||||||| |||| | |||||||||||| |||| ||||| ||||| |||| ||||| ||||||||| ||||    
T  21788527 ttgttttttcataaactatcttaacaagcttatgaat-aataaataaaagcttatttatttgcataagatgttttgcataaactc-aaaataagctcaat 21788430  T
Q  312 ccaaac 317  Q
    ||||||    
T  21788429 ccaaac 21788424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 8832522 - 8832421
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatga--atacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagccaatccaaa 316  Q
    ||||||||||||||||||| |||||||||| | |  ||||| |||||||||||| ||||  ||||||||||   ||| ||||||| ||||||||| ||||    
T  8832522 ttttcataaactaccttgaaaagcttatgattaataatacataaaagcttatttatttgtttaagctgttttttatatctcaaaattaagccaatgcaaa 8832423  T
Q  317 cg 318  Q
    ||    
T  8832422 cg 8832421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 36501532 - 36501583
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagctta 267  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  36501532 tgttttttcataaactaccttgacaagcttatgaat-aatacataaaaactta 36501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 319
Target Start/End: Original strand, 755761 - 755862
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||||||| | |||||||| ||||| |||||| ||||||||| || ||||  |||| ||||| |||||| |||||||| || |||||||||    
T  755761 ttttttcataaactaccgtaacaagcttctgaat-aatacataaaagcttaattatttgcgtaagttgttttgcataagctcaaaaa-aatccaatccaa 755858  T
Q  316 acgg 319  Q
    ||||    
T  755859 acgg 755862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 13056346 - 13056440
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaat 311  Q
    |||||| ||||||||||||||||||||||||||  |||||| |||||||||| | |||| |||| | |||| |||| | || ||||||||||||||    
T  13056346 tttttttataaactaccttgacaagcttatgaa-aaatacataaaagcttatctatttgcataatccgttttgcatgagctaaaaaataagccaat 13056440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 11777049 - 11776982
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||| ||| |||||||||| ||| |||||| |||||||||||| | || |||||||||||    
T  11777049 ttttcataaactaacttaacaagcttataaat-aatacataaaagcttatttatatgcataagctgttt 11776982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 29774813 - 29774710
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    |||||||||||||||||||| |||| || |||||| ||| || ||||| |||||| |||| ||||| ||||  |||||| || ||||||||| ||| |||    
T  29774813 gttttttcataaactaccttaacaaactaatgaat-aatgcataaaagtttatttatttgcataagttgttatgcataagctaaaaaataagacaaccca 29774715  T
Q  315 aacgg 319  Q
    |||||    
T  29774714 aacgg 29774710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 12223921 - 12223886
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||||||| ||||||||||    
T  12223921 tgttttttcataaactaccttgacaggcttatgaat 12223886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 12238501 - 12238567
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||| |||||||||| ||| ||||||  || |||||||| |||| |||||||    
T  12238501 gttttttcataaactaccttaacaagcttataaat-aatacattaatgcttatttatttgcataagct 12238567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 38471808 - 38471910
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||| |  | ||||||||  || || ||| |||||| ||||| |||| ||||||||||| |||||| ||| ||||||||| |||||    
T  38471808 tgttttttcataaactacatcaagaagcttatacat-aacacataaaagcatatttatttgcataagctgttttgcataagctcgaaaataagctaatcc 38471906  T
Q  314 aaac 317  Q
    ||||    
T  38471907 aaac 38471910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 250
Target Start/End: Complemental strand, 39592314 - 39592283
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||||||||||||||    
T  39592314 ttttcataaactaccttgacaagcttatgaat 39592283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 244
Target Start/End: Complemental strand, 1120355 - 1120325
Alignment:
Q  214 ttgttttttcataaactaccttgacaagctt 244  Q
    |||||||||||||||||||||||||||||||    
T  1120355 ttgttttttcataaactaccttgacaagctt 1120325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 12442879 - 12442831
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagctta 267  Q
    |||||||||||||| |||||||||||||||||| |||||  |||||||||    
T  12442879 tttttcataaactatcttgacaagcttatgaat-aatacctaaaagctta 12442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 37419987 - 37420081
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    ||||||||||||||||||||  |||||||| |  ||| |||||||||||| |||| ||||  | |||  ||||| || |||||||||||||||||||    
T  37419987 ttcataaactaccttgacaaaattatgaatta--acataaaagcttatttatttgcataaattatttttcataagctaaaaaataagccaatccaaa 37420081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 43787819 - 43787891
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||| ||||||  ||||| |||||||| |||||| ||||| |||||| |||| |||| ||||||    
T  43787819 ttgttttttcataagctacctaaacaagtttatgaat-aatacataaaagtttatttatttgtataaactgttt 43787891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 306
Target Start/End: Complemental strand, 5903602 - 5903511
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagca-taactcaaaaataag 306  Q
    ||||||||||| |||||| ||||||||||||||| | ||||||  || |||| ||| |||| ||||| ||||| ||| || ||||||||||||    
T  5903602 tgttttttcattaactactttgacaagcttatgagt-aatacactaatgcttgtttatttgcataagttgttttgcattagctcaaaaataag 5903511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 317
Target Start/End: Original strand, 27703500 - 27703574
Alignment:
Q  240 agcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    ||||||||||| |||| | |||||||||||| |||| ||||||||||| |||||| ||||||   ||||||||||||||    
T  27703500 agcttatgaat-aatatataaaagcttatttatttgcataagctgttttgcataagctcaaa---aagccaatccaaac 27703574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 44475539 - 44475575
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  44475539 ttgttttttcataaactacattgataagcttatgaat 44475575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 42852092 - 42851987
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||| ||||||||||| |||||| | ||||||||||||||||    
T  42852092 ttgttttttcataaactatcttgacaagcttatgaat-aatacataaaagcttatttatttgaataagctgttttgcataagcccaaaaataagccaatc 42851994  T
Q  313 caaacgg 319  Q
    | |||||    
T  42851993 cgaacgg 42851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 24030284 - 24030182
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| | |||| || ||||||||| || |||    
T  24030284 tgttttttcataaactactttgacaagcttatgaat-aatacataaaagcttatttatttggataagctgttttgtataagcttaaaaataagtcattcc 24030186  T
Q  314 aaac 317  Q
    ||||    
T  24030185 aaac 24030182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 22201959 - 22202045
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagc 307  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||||||| |||||| |||||||||||||    
T  22201959 ttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttacataagctgttttgcataagctcaaaaataagc 22202045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 1576700 - 1576594
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||| |||||||||| ||||||||||||||||  |||||| ||||| |||||| ||||  |||||||||| |||||| | ||| ||||||||||||    
T  1576700 ttgtttttccataaactacattgacaagcttatgaa--aatacataaaagtttatttatttgcttaagctgttttgcataagcccaagaataagccaatc 1576603  T
Q  313 caaacggac 321  Q
    |||||||||    
T  1576602 caaacggac 1576594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 1608115 - 1608221
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||| |||||||||| ||||||||||||||||  |||||| ||||| |||||| ||||  |||||||||| |||||| | ||| ||||||||||||    
T  1608115 ttgtttttccataaactacattgacaagcttatgaa--aatacataaaagtttatttatttgcttaagctgttttgcataagcccaagaataagccaatc 1608212  T
Q  313 caaacggac 321  Q
    |||||||||    
T  1608213 caaacggac 1608221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 12987031 - 12987133
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||||||| |||| ||||| | |||  |||||  ||| ||||||||||||||    
T  12987031 tgttttttcataaactaccttgacaagcttatgaa-caatacataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatcc 12987129  T
Q  314 aaac 317  Q
    ||||    
T  12987130 aaac 12987133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 13060619 - 13060721
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||||||||||||||||||||  |||||| |||||||||||| |||| ||||| | |||  |||||  ||| ||||||||||||||    
T  13060619 tgttttttcataaactaccttgacaagcttatgaa-caatacataaaagcttatttatttgcataagttcttttacataatatcagaaataagccaatcc 13060717  T
Q  314 aaac 317  Q
    ||||    
T  13060718 aaac 13060721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 17128348 - 17128250
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||| |||||||||||||| |||| ||| |||||||| |||||| |||||||||||| |||| ||||||||||| |||||| |||||||||||| |||||    
T  17128348 ttgtattttcataaactactttgataagtttatgaat-aatacataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatc 17128250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 305
Target Start/End: Original strand, 29922210 - 29922296
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataa 305  Q
    |||||||||||||||||||||||||||||||| |||||| |||| ||||||| |||| |||| |||||| |||||| |||||||||||    
T  29922210 ttttcataaactaccttgacaagcttatgaat-aatacataaaaacttatttatttgcataaactgttttgcataagctcaaaaataa 29922296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 10537236 - 10537307
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||||||| |||||||||||||| ||| |||||| |||||||||||| |||| |||||||||||    
T  10537236 tgttttttcataaactatcttgacaagcttataaat-aatacataaaagcttatttatttgcataagctgttt 10537307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 28625549 - 28625482
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||||||||||| |||||  |||||||||||| |||| |||||||    
T  28625549 tgttttttcataaactaccttgacaagcttatgaat-aatacttaaaagcttatttatttgcataagct 28625482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 12467331 - 12467269
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||    
T  12467331 ttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttgcataa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 316
Target Start/End: Original strand, 17868192 - 17868295
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||| |||||||||||||||||||||||| ||  |||||| ||||||||| || |||| |||||||| ||||  |||  | |||||||||||||||    
T  17868192 ttgtttttccataaactaccttgacaagcttataaaataatacacaaaagcttacttatttgcataagctgcttagagtaaggtaaaaaataagccaatc 17868291  T
Q  313 caaa 316  Q
    ||||    
T  17868292 caaa 17868295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 1473425 - 1473324
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||| || |||||||||||||||||| |||||| |||||||||||| |||| ||||| ||||  | |||| |||||||| |||| |||||    
T  1473425 tgttttttcataaattaacttgacaagcttatgaat-aatacataaaagcttatttatttgcataagttgttctgtataagctcaaaaagaagcaaatcc 1473327  T
Q  314 aaa 316  Q
    |||    
T  1473326 aaa 1473324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 2878693 - 2878797
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagcc-aatc 312  Q
    |||| |||||||||| || ||||||| ||||||||| |||| | |||||||||||| |||| |||||||||||||||||| ||| |||||||||| ||||    
T  2878693 tgttgtttcataaaccacattgacaaacttatgaat-aatagataaaagcttatttatttgcataagctgtttagcataagctc-aaaataagcctaatc 2878790  T
Q  313 caaacgg 319  Q
    |||||||    
T  2878791 caaacgg 2878797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 11163290 - 11163399
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    |||||||||||||||| |||||||||||||||  ||||| |||| ||||||  |||  ||||||||||| |||||| || ||||||||| ||||||||||    
T  11163290 ttttcataaactacctcgacaagcttatgaat-catacataaaaacttattgatttacataagctgttttgcataagctaaaaaataagtcaatccaaac 11163388  T
Q  318 ggactcttata 328  Q
    || | ||||||    
T  11163389 gggcccttata 11163399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 41059809 - 41059873
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||||| |||||||    
T  41059809 tttttcataaacaaccttgataagcttatgaat-aatacataaaagcttatttgtttgcataagct 41059873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 280
Target Start/End: Complemental strand, 41534692 - 41534628
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||    
T  41534692 tgttttttcgtaaactaccttgacaagcttatgaat-aatacataaaagcttatttatttgcataa 41534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 42706863 - 42706798
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||| ||||||||||||||||||||||||||| |||||  |||||||||||| |||| |||||||    
T  42706863 tttttttataaactaccttgacaagcttatgaat-aatacttaaaagcttatttatttgcataagct 42706798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 1868912 - 1868861
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttattt 270  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||||||    
T  1868912 tttttcataaactaccttgacaagcttgtgaat-aatacataaaagcttattt 1868861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 3977544 - 3977485
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||| |||||| ||||    
T  3977544 tgttttttcataaactaccttgacaagcttatgaat-aatgcacaaaagtttatttatttg 3977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 31637111 - 31637166
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttg 271  Q
    |||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  31637111 tgttctttcataaattaccttgacaagcttatgaat-aatacataaaagcttatttg 31637166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 40452495 - 40452562
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||| |||||||||||||||||||||||||||||| ||| || |||||||||||  |||| |||||||    
T  40452495 tgtttcttcataaactaccttgacaagcttatgaat-aatgcataaaagcttattcctttgcataagct 40452562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 3520520 - 3520621
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||| || |||||||||||||||||||||||||| |||||  ||||| |||||| |||  |||| |||||| |||||| || ||||||||| ||||||    
T  3520520 tgttttgtcctaaactaccttgacaagcttatgaat-aatac-taaaaggttatttatttacataaactgttttgcataagctaaaaaataagtcaatcc 3520617  T
Q  314 aaac 317  Q
    ||||    
T  3520618 aaac 3520621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 41419570 - 41419535
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  41419570 tgttttttcataaactaccttgacaagcttatgaat 41419535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 17657311 - 17657246
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataag 281  Q
    ||||||||||||||||||  || ||||||||||||| |||||| |||||||||||| |||| |||||    
T  17657311 tgttttttcataaactacaatggcaagcttatgaat-aatacataaaagcttatttatttgcataag 17657246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 43268644 - 43268704
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagc 282  Q
    |||||||||||||||||| ||||||| ||| |||||| |||||||||||| |||| ||||||    
T  43268644 ttcataaactaccttgaccagcttattaat-aatacataaaagcttatttatttgcataagc 43268704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 1372013 - 1372112
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    |||||||||||| || || |||||||||| ||| |||||| |||||  ||||| |||  |||| |||||| |||||| |||||||||||| |||||||||    
T  1372013 tttttcataaaccacatttacaagcttataaat-aatacataaaagtgtatttatttacataaactgttttgcataagctcaaaaataagtcaatccaaa 1372111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 2577445 - 2577481
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2577445 ttgttttttcataaattaccttgacaagcttatgaat 2577481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 10537196 - 10537132
Alignment:
Q  258 aaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggac 321  Q
    ||||||||||| | |||| ||||||| |||  ||||| |||||||||||||||||||||||||||    
T  10537196 aaaaagcttatatatttgcataagctatttttcataaactcaaaaataagccaatccaaacggac 10537132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 11706934 - 11707013
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||| |||||||| ||| |||||||| ||| |||||| |||| |||||||||||| |||| ||| ||||||| ||||||    
T  11706934 ttgtttcttcataaaatacattgacaagtttaggaatga-tacataaaagcttatttatttgcataggctgttttgcataa 11707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 15414062 - 15413959
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||||  ||||||||||| |||| ||||| ||| ||||||  ||  ||||||| |||| ||||||||||| |||||| ||| |||||||| |||||    
T  15414062 ttgttttttagtaaactaccttaacaaacttatcaat-aatacattaatacttatttatttgcataagctgttttgcataagctctaaaataagtcaatc 15413964  T
Q  313 caaac 317  Q
    |||||    
T  15413963 caaac 15413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 14243890 - 14243792
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||| ||||||||||||| |  | ||||||||| | |||| | |||||||||| |||  ||||||||||| |||||| |||||||||||| ||||||||    
T  14243890 tttttccataaactaccttaaacaacttatgaat-attacatagaagcttatttatttacataagctgttttgcataatctcaaaaataagtcaatccaa 14243792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 29922158 - 29922095
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggac 321  Q
    |||||||||||| |||| ||||||| |||  ||||| |||||||||||||||||| ||||||||    
T  29922158 aaaagcttatttatttgcataagctatttttcataaactcaaaaataagccaatcaaaacggac 29922095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 321
Target Start/End: Original strand, 35536961 - 35537024
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggac 321  Q
    |||||||||||| |||| ||||||| |||  ||||| |||||||||||| ||||||||||||||    
T  35536961 aaaagcttatttatttgcataagctatttttcataatctcaaaaataagtcaatccaaacggac 35537024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 40697123 - 40697182
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    |||||||||||| |||| ||||||| |||  ||||| |||||||||||||||||||||||    
T  40697123 aaaagcttatttatttgtataagctatttttcataagctcaaaaataagccaatccaaac 40697182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 42558740 - 42558837
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagccaatccaaa 316  Q
    |||||||||||||||| || |||| ||||||||| | |||  |||||||||||| ||   ||||||||||| ||||||  |||||||||| |||||||||    
T  42558740 ttttttcataaactac-ttaacaaacttatgaat-agtacgtaaaagcttatttattcacataagctgttttgcataatccaaaaataagtcaatccaaa 42558837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 342056 - 341955
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    ||||||||||||||||||| ||| ||| | ||| |||||| |||| ||||||| |||  || || || || |||||| |||||||||||||| |||||||    
T  342056 tttttcataaactaccttggcaaacttgtaaat-aatacataaaaacttatttatttacatgagttgctttgcataagctcaaaaataagccgatccaaa 341958  T
Q  317 cgg 319  Q
    |||    
T  341957 cgg 341955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 1943073 - 1943012
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||||||| || |||||| |||| |||||||  ||| |||||||    
T  1943073 ttcataaactaccttgacaagcttatggat-aatacataaaaacttatttacttgcataagct 1943012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 2670140 - 2670043
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    |||||||||||||||||||||| ||||||||| | |||| ||||| || ||| |||| |||| ||||||  ||||| |||||||| |||| ||| ||||    
T  2670140 ttttcataaactaccttgacaaacttatgaat-agtacataaaagattgtttatttgcataaactgttttacataagctcaaaaacaagcgaattcaaa 2670043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 246
Target Start/End: Original strand, 39154779 - 39154809
Alignment:
Q  216 gttttttcataaactaccttgacaagcttat 246  Q
    |||||||||||||||||||||||||||||||    
T  39154779 gttttttcataaactaccttgacaagcttat 39154809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 40697064 - 40697003
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||| ||||||||||||||||| ||| |||||| |||| ||||||| |||| |||||||    
T  40697064 ttcataaaataccttgacaagcttataaat-aatacataaaaacttatttatttgcataagct 40697003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 43319072 - 43318971
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||| || |||||||||| ||| |||||| |||  | ||||| |||| ||||| ||||| |||||| ||| ||||||||| || ||    
T  43319072 tgttttttcataaactacattaacaagcttataaat-aatacataaagacatatttatttgcataagttgttttgcataagctctaaaataagctaaacc 43318974  T
Q  314 aaa 316  Q
    |||    
T  43318973 aaa 43318971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 5559941 - 5559985
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaa 262  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||    
T  5559941 ttttttcataaactaccttgacgagcttatgaa-gaatacataaaa 5559985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 6144805 - 6144753
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttattt 270  Q
    |||||||||||| ||||||||||||||||||| | |||| | ||||||||||||    
T  6144805 ttttttcataaaataccttgacaagcttatgagt-aatatataaaagcttattt 6144753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 7364325 - 7364397
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||| || |||||||||||| |||||||||||||| |||| | | |||||||||| |||| || ||||||||    
T  7364325 ttgtttgttgataaactaccttaacaagcttatgaat-aataaatagaagcttatttttttgcatcagctgttt 7364397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 13739346 - 13739407
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    |||||||||||| |||| ||||| | |||  ||||| |||||||||||||||||||||||||    
T  13739346 aaaagcttatttatttgcataagttatttttcataaactcaaaaataagccaatccaaacgg 13739407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 15122613 - 15122510
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    ||||||||||||||||||||| | || ||||| ||| |||||| |||| ||||||| |||| ||||| |||||   |||| ||| ||||||||| |||||    
T  15122613 tgttttttcataaactacctt-aaaaacttataaat-aatacataaaaacttatttctttgcataagttgttttatataagctctaaaataagctaatcc 15122516  T
Q  314 aaacgg 319  Q
    ||||||    
T  15122515 aaacgg 15122510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 26003063 - 26002955
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    ||||||||||| || ||| |||| ||||| ||| |||||| |||| ||||||| |||| |||| |||||| | |||| ||| ||||||||  ||||||||    
T  26003063 tttttcataaaataacttaacaaacttataaat-aatacataaaaacttatttatttgcataaactgttttgtataagctctaaaataagttaatccaaa 26002965  T
Q  317 cggactctta 326  Q
    ||||| ||||    
T  26002964 cggaccctta 26002955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 35083356 - 35083417
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    |||||||||||| |||| |||| || |||| ||||| ||||||||||| |||||||||||||    
T  35083356 aaaagcttatttatttgcataaactatttatcataaactcaaaaataaaccaatccaaacgg 35083417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 35536914 - 35536881
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatga 248  Q
    ||||||||||||||||| ||||||||||||||||    
T  35536914 tgttttttcataaactatcttgacaagcttatga 35536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 22573723 - 22573644
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||| |||||||||||||| || |||| ||||| ||| ||||||||||| || |||| |||| ||||| ||||| ||||||    
T  22573723 ttgtattttcataaactacatttacaaacttataaat-aatacaaaaaaactcatttatttgcataagttgttttgcataa 22573644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 33757156 - 33757054
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    ||||||||||||||||| ||| | || ||||| ||| |||||| |||| ||||||| |||| |||||||||||   |||| ||| ||||||||| |||||    
T  33757156 tgttttttcataaactagcttaaaaa-cttataaat-aatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagctaatcc 33757059  T
Q  314 aaacg 318  Q
    |||||    
T  33757058 aaacg 33757054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 23297502 - 23297405
Alignment:
Q  220 tttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||| ||||||| ||| |||||| |||||||||||||||||||||||    
T  23297502 tttcataaactaccttgacaaacttatgaat-aatacataaaagcttatttatttgcataagctattttgcataagctcaaaaataagccaatccaaac 23297405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 43699500 - 43699604
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||| ||||||||||||||||| || ||| |||||||||||| |||| ||||| |||||  ||||| |||||||||||||||||||    
T  43699500 tgttttttcataaactacattgacaagcttatgaat-aagacataaaagcttatttatttgtataagttgtttttcataagctcaaaaataagccaatcc 43699598  T
Q  314 aaacgg 319  Q
    ||||||    
T  43699599 aaacgg 43699604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 38345838 - 38345944
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||| ||||||| ||||||||| | |||| |||||||||||| |||||||||||||||| |||||| |||||| ||||| |||||    
T  38345838 ttgttttttcataaactactttgacaa-cttatgaat-actacataaaagcttatttatttggataagctgttttgcataagctcaaacataagtcaatc 38345935  T
Q  313 caaacggac 321  Q
    |||||||||    
T  38345936 caaacggac 38345944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 35124456 - 35124355
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||| |||| | |||| ||||||||||| |||||| |||||||||||| ||||||    
T  35124456 tgttttttcataaactaccttgacaagcttatgaat-agtacataaaaggttatatatttgcataagctgttttgcataagctcaaaaataagtcaatcc 35124358  T
Q  314 aaa 316  Q
    |||    
T  35124357 aaa 35124355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 29877705 - 29877606
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    ||||||||||||||||||  ||||||||||||| |||||| |||||||||||| |||| ||||  ||||| |||||| ||||||||||||||||||||||    
T  29877705 tttttcataaactaccttagcaagcttatgaat-aatacataaaagcttatttatttgcataaattgttttgcataagctcaaaaataagccaatccaaa 29877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 218 - 321
Target Start/End: Complemental strand, 3564286 - 3564183
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    ||||||||||||||||||||||| ||||||||| |||| | ||||| |||||| |||  ||||||||||| |||||| |||||||| ||| |||||||||    
T  3564286 tttttcataaactaccttgacaaacttatgaat-aatatataaaagtttatttattttcataagctgttttgcataagctcaaaaacaagtcaatccaaa 3564188  T
Q  317 cggac 321  Q
    |||||    
T  3564187 cggac 3564183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 28074432 - 28074368
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagc 282  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||    
T  28074432 ttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttgcataagc 28074368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 42611884 - 42611987
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaa-aaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaat 311  Q
    ||||||||||||||||||| | ||||||||||||||| |||||| | ||||||||||| |||| ||||| ||||| |||||| || ||||||||||||||    
T  42611884 ttgttttttcataaactac-tcgacaagcttatgaat-aatacatataaagcttatttatttgcataagttgttttgcataagctaaaaaataagccaat 42611981  T
Q  312 ccaaac 317  Q
    ||||||    
T  42611982 ccaaac 42611987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 7148841 - 7148774
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||| |||||||    
T  7148841 tgttttttcaaaaactaccttgacaagcttatgaat-aatacataaaagcttatttatttgcataagct 7148774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 12495661 - 12495734
Alignment:
Q  215 tgttttttcataaactacctt--gacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||| |||| |||||||||||    
T  12495661 tgttttttcataaactaccttttgacaagcttatgaat-aatacataaaagcttatttatttgcataagctgttt 12495734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 18424297 - 18424398
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    |||||||||||||||||| ||||| |||||||| |||||| |||||||||||| |||| ||||  ||||| |||||| |||||||||| | |||| ||||    
T  18424297 tttttcataaactaccttcacaagtttatgaat-aatacataaaagcttatttatttgtataaattgttttgcataagctcaaaaatatgtcaattcaaa 18424395  T
Q  317 cgg 319  Q
    |||    
T  18424396 cgg 18424398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 32628847 - 32628747
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||| ||||| ||||||||||||||| || ||||||||||||||   |||  | ||||||||| |||||| |||||||||||| ||||||    
T  32628847 tgttttttcataaattacctcgacaagcttatgaat-aacacaaaaaagcttat---ttttcaaaagctgttttgcataagctcaaaaataagacaatcc 32628752  T
Q  314 aaacg 318  Q
    |||||    
T  32628751 aaacg 32628747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 40699426 - 40699321
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||||||||||||||||||    | |||| ||||  |||||| |||| ||||||||||| |||||| ||||| ||||||||||||    
T  40699426 ttgttttttcataaactaccttgacaagcttatg-cgcactacataaaaatttatttatttgcataagctgttttgcataagctcaataataagccaatc 40699328  T
Q  313 caaacgg 319  Q
    || ||||    
T  40699327 cagacgg 40699321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 897040 - 896972
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||| |||||| |||| |||||||    
T  897040 ttgttttttcataaactacattgacaagcttatgaat-aatacataaaagtttatttatttgcataagct 896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 316
Target Start/End: Original strand, 1374381 - 1374481
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    |||||||||||||||||| ||||||||||||||||  || || |||| ||| ||| |||| ||||| | ||| |||||| ||||||||||||||||||||    
T  1374381 gttttttcataaactaccatgacaagcttatgaat-catgcataaaaacttttttatttgcataagtttttttgcataagctcaaaaataagccaatcca 1374479  T
Q  315 aa 316  Q
    ||    
T  1374480 aa 1374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 315
Target Start/End: Complemental strand, 8130557 - 8130457
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcata-actcaaaaataagccaatcc 313  Q
    ||||| ||||||| ||||| |||||| ||||||||| ||| || |||||||||||| |||| ||||||||||| |||||  || ||||||||||||||||    
T  8130557 tgtttgttcataagctaccctgacaaacttatgaat-aatgcataaaagcttatttatttgcataagctgttttgcatatgctaaaaaataagccaatcc 8130459  T
Q  314 aa 315  Q
    ||    
T  8130458 aa 8130457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 948139 - 948037
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||||||||||||||  |||||||| |||||| |||||||||||| |||  ||||||| ||| |||||| || |||| |||| || |||||    
T  948139 ttttttcataaactaccttgacaaagttatgaat-aatacataaaagcttatttattttcataagctattttgcataagctaaaaagtaagtcattccaa 948041  T
Q  316 acgg 319  Q
    ||||    
T  948040 acgg 948037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 488403 - 488468
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||||||| || |||| |||||||    
T  488403 ttttttcataaactaccttgacaagcttattaat-aatacataaaagcttacttatttgcataagct 488468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 212964 - 213042
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||||||| |||||||||||||| |||| || ||| ||||||| |||| ||||| ||||| ||||||    
T  212964 ttgttttttcataaactaccttaacaagcttatgaat-aata-aataaaacttatttatttgcataagttgttttgcataa 213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 41228973 - 41228894
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||||||| |||||||||||||| |||| | |||||| |||||   || ||||||||||| ||||||    
T  41228973 ttgttttttcataaactaccttaacaagcttatgaat-aataaataaaagcctatttacctgcataagctgttttgcataa 41228894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 48591441 - 48591508
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||| ||||||| |||| | |||| ||||||| |||| |||||||    
T  48591441 tgttttttcataaactaccttgacaagcgtatgaat-aatatataaaaacttatttatttgcataagct 48591508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 17222898 - 17222863
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  17222898 tgttttttcataaactaccttgacaagcttatgaat 17222863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 28663642 - 28663607
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  28663642 tgttttttcataaactaccttgacaagcttatgaat 28663607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 27368169 - 27368270
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagcc-aatcc 313  Q
    ||||||||||||| |||| ||||||| ||||||||| |||| | |||||||||||| |||| ||||| |||||  ||||| |  |||||||||| |||||    
T  27368169 tgttttttcataagctacattgacaaacttatgaat-aatatataaaagcttatttatttgcataagttgttttacataagttcaaaataagcctaatcc 27368267  T
Q  314 aaa 316  Q
    |||    
T  27368268 aaa 27368270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 825751 - 825684
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||| || |||| |||||||||| |||| | |||||||||||| |||| |||||||    
T  825751 tgttttttcataaactaactagacaggcttatgaat-aatatagaaaagcttatttatttgcataagct 825684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 21216348 - 21216380
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaat 250  Q
    |||||||||||||||||||||||||||||||||    
T  21216348 tttttcataaactaccttgacaagcttatgaat 21216380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 23335711 - 23335644
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||| | |||||||||| |||||| |||| || |||| |||| |||||||    
T  23335711 tgttttttcataaactaccttgatatgcttatgaat-aatacataaaatctcatttatttgcataagct 23335644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 36740969 - 36740906
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||| |||||||||||||| || |||| | |||||||||||| |||| |||||||    
T  36740969 ttttcataaactactttgacaagcttatgcat-aatatataaaagcttatttatttgcataagct 36740906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 52274137 - 52274204
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||| ||||||||||||| |||||||| ||| |||||| ||||| |||||| |||| |||||||    
T  52274137 tgttttttcgtaaactaccttgataagcttatcaat-aatacataaaagtttatttatttgcataagct 52274204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 7206602 - 7206707
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagc-caat 311  Q
    |||||||||||||||||||||| ||| |||  ||||| |||| | |||||||||||  |||| ||||||||||  |||||| ||| ||||||||| ||||    
T  7206602 ttgttttttcataaactaccttaacaggctcgtgaat-aataaataaaagcttattcatttgcataagctgttctgcataagctc-aaaataagctcaat 7206699  T
Q  312 ccaaacgg 319  Q
    ||||||||    
T  7206700 ccaaacgg 7206707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 8601269 - 8601203
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||| |||||| |||||| ||| |||| ||||||||| |||| |||| |||||||    
T  8601269 gttttttcataaactacattgacaggcttataaat-aatagaaaaaagctcatttatttgcataagct 8601203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 48591393 - 48591330
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggac 321  Q
    |||||||||||| |||| ||||||| |||  ||||| |||||||||||||||||||||| ||||    
T  48591393 aaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaatggac 48591330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 4331405 - 4331352
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttattt 270  Q
    |||||||||||||||||||||||||  |||||||| |||| | ||||||||||||    
T  4331405 gttttttcataaactaccttgacaaagttatgaat-aataaataaaagcttattt 4331352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 46704287 - 46704340
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatt 269  Q
    ||||||||||||||||||||| ||||||| |||||| |||| | |||||||||||    
T  46704287 tgttttttcataaactaccttaacaagctcatgaat-aataaataaaagcttatt 46704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 52700563 - 52700671
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||| || || |||||||||| ||| |||||| |||  ||||||| |||  ||||| ||||| |||||| ||| |||||||| ||||||||    
T  52700563 ttttttcataaaccacttttacaagcttataaat-aatacataaagacttatttatttacataagttgttt-gcataagctctaaaataagtcaatccaa 52700660  T
Q  316 acggactctta 326  Q
    |||||| ||||    
T  52700661 acggaccctta 52700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 12023114 - 12023073
Alignment:
Q  277 ataagctgtttagcataactcaaaaataagccaatccaaacg 318  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||    
T  12023114 ataaggtgttttgcataactctaaaataagccaatccaaacg 12023073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 29997329 - 29997362
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||| ||||||||||||    
T  29997329 ttttttcataaactaccttgataagcttatgaat 29997362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 30956751 - 30956648
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaataca-aaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatcc 313  Q
    |||||||||||||||||||||| |||||| ||| | |||||| ||||||||||||| |||| | ||| | ||| |||| |||| ||||||||| ||| ||    
T  30956751 gttttttcataaactaccttgagaagcttgtgagt-aatacataaaaagcttatttatttgtacaag-ttttttgcataaactaaaaaataagtcaaccc 30956654  T
Q  314 aaacgg 319  Q
    ||||||    
T  30956653 aaacgg 30956648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 33533997 - 33533893
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatcc 313  Q
    |||||||||||||||||||||||| | ||||||||| |||||    ||||||||   |||| ||||| ||||| | || ||||||||| |||| ||||||    
T  33533997 tgttttttcataaactaccttgactaacttatgaat-aataccttgaagcttataaatttgcataagttgttttgtataaactcaaaattaagtcaatcc 33533899  T
Q  314 aaacgg 319  Q
    ||||||    
T  33533898 aaacgg 33533893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 34633425 - 34633364
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    ||||| |||||| |||| ||||| ||||| |||||| || ||||||||||||||||||||||    
T  34633425 aaaagtttatttatttgcataagttgttttgcataagctaaaaaataagccaatccaaacgg 34633364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 42153131 - 42153070
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    |||||||||||| |||| ||||||| |||  | ||| |||||||||||||||||||||||||    
T  42153131 aaaagcttatttatttgcataagctattttacgtaagctcaaaaataagccaatccaaacgg 42153070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 2702731 - 2702834
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||| ||||||| ||||||||| |||| ||||| ||| ||||||  ||  ||||||| | || |||||||| || |||||| ||| ||||||||||||||    
T  2702731 ttgtcttttcattaactaccttaacaaacttataaat-aatacactaatacttatttatgtgcataagctgctttgcataagctctaaaataagccaatc 2702829  T
Q  313 caaac 317  Q
    |||||    
T  2702830 caaac 2702834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 4068185 - 4068080
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| | ||||| ||| ||| || || |||||||||||||||    
T  4068185 ttgttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttgcacaagctattttgcaaaagctaaaaaataagccaatc 4068087  T
Q  313 caaacgg 319  Q
    |||||||    
T  4068086 caaacgg 4068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 319
Target Start/End: Complemental strand, 391225 - 391133
Alignment:
Q  228 actaccttgacaagcttatgaatgaataca-aaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    ||||| ||||||||||||||||| |||| | ||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  391225 actacattgacaagcttatgaat-aatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataagccaatccaaacgg 391133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 18327593 - 18327489
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatcc 313  Q
    ||||||||||||||||| |||||||||||||||| | |||||| |||||||||||| |||| ||||||||||| | || || || |||||||| ||||||    
T  18327593 tgttttttcataaactatcttgacaagcttatgagt-aatacataaaagcttatttatttgcataagctgttttgaataaattccaaaataagtcaatcc 18327495  T
Q  314 aaacgg 319  Q
    ||||||    
T  18327494 aaacgg 18327489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 316
Target Start/End: Original strand, 26946120 - 26946223
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaataca-aaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaat 311  Q
    |||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||| |||  |||||| |||| |||||| |||||||||||| ||||    
T  26946120 ttgttttttcataaactaccttaacaagcttatgaat-aacacataaaaagcttatttatttacataagccgttttgcataagctcaaaaataagtcaat 26946218  T
Q  312 ccaaa 316  Q
    |||||    
T  26946219 ccaaa 26946223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 37712137 - 37712035
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagca-taactcaaaaataagccaatc 312  Q
    |||||||||||||||||||||||||||||||||||||  ||||| |||||||||||  |||| |||| ||||||  || || |||||||||||  |||||    
T  37712137 ttgttttttcataaactaccttgacaagcttatgaat--atacataaaagcttattcatttgcataaactgtttttcattagctcaaaaataaatcaatc 37712040  T
Q  313 caaac 317  Q
    |||||    
T  37712039 caaac 37712035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 6337773 - 6337840
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  6337773 tgttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttacataagct 6337840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 1265715 - 1265812
Alignment:
Q  220 tttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    |||||||||||||||||||||  |||||||| |||||| |||| ||||| |||||| ||||| ||||| |||||| |||||||||||| |||| |||||    
T  1265715 tttcataaactaccttgacaaaattatgaat-aatacataaaatcttatctgtttgtataagttgttttgcataagctcaaaaataagtcaattcaaac 1265812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 15515366 - 15515418
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttattt 270  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  15515366 ttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttattt 15515418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 28690073 - 28689970
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagct--tatttgtttggataagctgtttagcat-aactcaaaaataagccaat 311  Q
    ||||| |||||||||||||||||||| ||||||||| |||||| |||| ||  ||||| |||| ||||||||||  |||| |||| ||||||||||||||    
T  28690073 tgtttgttcataaactaccttgacaaacttatgaat-aatacataaaaccttatatttatttgcataagctgttctgcataaactaaaaaataagccaat 28689975  T
Q  312 ccaaa 316  Q
    |||||    
T  28689974 ccaaa 28689970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 315
Target Start/End: Complemental strand, 35590199 - 35590099
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    ||||||||||||||| |||||||||||||||||||   ||||| |||||||||||| |||| ||||| |||||  ||||| || ||||||||| ||||||    
T  35590199 tgttttttcataaacaaccttgacaagcttatgaa-ctatacataaaagcttatttatttgcataagttgttttacataagctaaaaaataagtcaatcc 35590101  T
Q  314 aa 315  Q
    ||    
T  35590100 aa 35590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 3069871 - 3069938
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||||||||||| ||||||  |||||||| || |||| |||||||    
T  3069871 tgttttttcataaactaccttgacaagcttatgaat-aatacattaaagcttacttatttgtataagct 3069938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 26988217 - 26988158
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||    
T  26988217 tgttttttcataaactaccttgacaagcttatgaat-aagacataaaagcttatttatttg 26988158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 48819368 - 48819301
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||||||||||| ||||||  |||||| |||| |||| |||||||    
T  48819368 tgttttttcataaactaccttgacaagcttatgaat-aatacattaaagctcatttatttgcataagct 48819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 13039017 - 13038912
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagc-caatc 312  Q
    |||||||||||||||||||||| ||||||| |||||| |||| | |||||||||||| |||| || ||| |||| |||||||   || |||||| |||||    
T  13039017 ttgttttttcataaactaccttaacaagctcatgaat-aatatataaaagcttatttatttgcatcagccgttttgcataacctcaacataagctcaatc 13038919  T
Q  313 caaacgg 319  Q
    |||||||    
T  13038918 caaacgg 13038912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 45267532 - 45267467
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||||||| || ||| ||||| ||||||||||||| |||| |||||||    
T  45267532 ttttttcataaactaccttgacaagctaataaat-aatactaaaaagcttatttatttgcataagct 45267467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 9572800 - 9572880
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaataca-aaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||||||| |||| ||||||||| |||| | ||||||||||||| |||| | ||||||||| ||||||    
T  9572800 ttgttttttcataaactaccttaacaaacttatgaat-aataaataaaaagcttatttatttgcaaaagctgttttgcataa 9572880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 37329429 - 37329493
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||| |||| ||||    
T  37329429 tgttttttcataaactaccttgacaagtttatgaat-aatacataaaagctcatttatttgcataa 37329493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 16888983 - 16889041
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| ||||    
T  16888983 tgttttttcataaactacctt-acaagcttatgaat-aatacataaaagcttatttatttg 16889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 41196727 - 41196782
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttg 271  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||    
T  41196727 tgttttttcataaactacattgacaagcttatgaat-aatacataaaaacttatttg 41196782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 1005408 - 1005342
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||| |||||||| ||||||||||||||| |||||  |||||||||||| |||| |||||||    
T  1005408 gttttttcattaactacctagacaagcttatgaat-aatacgtaaaagcttatttatttgcataagct 1005342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 23544860 - 23544825
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||||||||||||||||||||    
T  23544860 tgttttttcataaactaccttgacaagcttatgaat 23544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 35897646 - 35897752
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    |||||||||||| |||| |||||||||||| |||| | |||| ||||||| |||| ||||| ||||| |||||| || ||||||||  |||||||||||     
T  35897646 ttcataaactactttgaaaagcttatgaat-aataaataaaaacttatttatttgcataagttgttttgcataaccttaaaaataaatcaatccaaacga 35897744  T
Q  320 actcttat 327  Q
    || |||||    
T  35897745 acccttat 35897752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 1565401 - 1565470
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||||||||||||||||||| |||| ||| || |||||||| ||| |||  |||||||||||    
T  1565401 ttttttcataaactaccttgacaagcttacgaat-aatgcataaaagcttgtttatttacataagctgttt 1565470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 31378770 - 31378835
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||| | ||| |||| | |||||||||||| |||| |||||||    
T  31378770 ttttttcataaactaccttgacaagcttgttaat-aatatataaaagcttatttatttgcataagct 31378835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 16225578 - 16225471
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||||| |||| |||||| |||| ||||| ||| |||||| |||| ||||||| |||  |||| |||||| |||||| ||| |||||||| |||||    
T  16225578 ttgttttttcctaaattaccttaacaa-cttat-aattaatacataaaaacttatttatttacataaactgttttgcataagctctaaaataagtcaatc 16225481  T
Q  313 caaacggact 322  Q
    ||||||||||    
T  16225480 caaacggact 16225471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 36422997 - 36423065
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||| ||||||||||||||| |||| ||||||||| |||| | |||||||||||| |||| |||||||    
T  36422997 ttgtttattcataaactaccttaacaaacttatgaat-aataaataaaagcttatttatttgcataagct 36423065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 26435193 - 26435295
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    ||||||||||||||||| ||||||| ||||  ||| |||||| |||| ||||||| |||| ||||||||||| | |||| |||||||||| | ||||| |    
T  26435193 gttttttcataaactactttgacaaacttaaaaat-aatacataaaa-cttatttatttgcataagctgttttgtataagctcaaaaatatgtcaatcaa 26435290  T
Q  315 aacgg 319  Q
    |||||    
T  26435291 aacgg 26435295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 47413489 - 47413548
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    |||||||||||| |||| ||||||| |||  ||||| |||||||||||||||||||||||    
T  47413489 aaaagcttatttatttgcataagctatttttcataagctcaaaaataagccaatccaaac 47413548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 10082317 - 10082248
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||||||||||| ||||| ||| || ||| |||| ||||||| |||| ||||| |||||    
T  10082317 ttttttcataaactaccttgacaaacttatcaat-aacacataaaaacttatttatttgcataagttgttt 10082248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 10850090 - 10850147
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    ||||| |||||||||| ||||||| ||||||||| |||||| |||||||||||| ||||    
T  10850090 tttttccataaactacgttgacaaccttatgaat-aatacataaaagcttatttatttg 10850147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 26936920 - 26936861
Alignment:
Q  222 tcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||  | ||||| | |||||||||| |||| |||||||    
T  26936920 tcataaactaccttgacaagcttatga--gtatacatagaagcttatttatttgcataagct 26936861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 28122683 - 28122594
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagc 307  Q
    ||||||||||||||||||| | ||||| |||||| |||| | ||||||| |||| |||| |||||||| || |||||| |  |||||||||    
T  28122683 ttttttcataaactaccttaagaagctcatgaat-aataaataaaagctaatttatttgcataagctgatttgcataaattcaaaataagc 28122594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 32497289 - 32497389
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    ||||||||||||||||||||| | || ||||| ||| |||||| |||| ||||||| |||| |||||||||||   |||| ||| ||||||||| |||||    
T  32497289 tgttttttcataaactacctt-aaaaacttataaat-aatacataaaaacttatttatttgcataagctgttttatataagctccaaaataagctaatcc 32497386  T
Q  314 aaa 316  Q
    |||    
T  32497387 aaa 32497389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 35282610 - 35282682
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||||||||| ||| | |||| ||| |||| | ||| |||||||| |||| |||||||||||    
T  35282610 ttgttttttcataaactaccttaacatgtttataaat-aataaataaacgcttatttatttgcataagctgttt 35282682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 46473164 - 46473057
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagc-caat 311  Q
    ||||||||||||| |||||||| | || || |||||| |||| | |||||||||||| |||  | ||||||||| |||||| ||| ||||||||| ||||    
T  46473164 ttgttttttcatatactaccttaaaaacctcatgaat-aataaataaaagcttatttatttacacaagctgttttgcataagctc-aaaataagctcaat 46473067  T
Q  312 ccaaacggac 321  Q
    ||||||||||    
T  46473066 ccaaacggac 46473057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 46501020 - 46501072
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttattt 270  Q
    ||||||||||||||||  |||||||||||| ||| |||||||||||||| ||||    
T  46501020 ttttttcataaactacaatgacaagcttataaat-aatacaaaaaagctcattt 46501072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 20169333 - 20169262
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||||  || | || ||||| ||| |||||| |||||||||||| |||| |||||||||||    
T  20169333 tgttttttcataaactatatttaaaaacttataaat-aatacataaaagcttatttatttgcataagctgttt 20169262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 37148112 - 37148211
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||||||||| |||  ||||| ||| ||||||  || |||||||| |||| |||||||| || |||||| ||  |||||||| ||||||||    
T  37148112 ttttttcataaactaccttaacatacttataaat-aatacattaatgcttatttatttgcataagctgctttgcataagctttaaaataagtcaatccaa 37148210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 37156937 - 37157036
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||||||||| |||  ||||| ||| ||||||  || |||||||| |||| |||||||| || |||||| ||  |||||||| ||||||||    
T  37156937 ttttttcataaactaccttaacatacttataaat-aatacattaatgcttatttatttgcataagctgctttgcataagctttaaaataagtcaatccaa 37157035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 317
Target Start/End: Original strand, 38781211 - 38781239
Alignment:
Q  289 gcataactcaaaaataagccaatccaaac 317  Q
    |||||||||||||||||||||||||||||    
T  38781211 gcataactcaaaaataagccaatccaaac 38781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 39941580 - 39941544
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat 250  Q
    |||||||||||| |||||| |||||||||||||||||    
T  39941580 ttgttttttcattaactactttgacaagcttatgaat 39941544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 40629440 - 40629535
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    |||||||||||||||||||||||||||||| ||||| | |||| |||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  40629440 ttcataaactaccttgacaagcttatgaat-aatac-ataaagtttatttatttggataagctgttttgcataagctcaaaaataagccaatccaaac 40629535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 38372624 - 38372525
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    |||||| |||||||||||||||| ||||||||| |||||| || ||||||||| |||| ||||||||||| |||||| |||||||||||| |||||||||    
T  38372624 tttttcgtaaactaccttgacaaacttatgaat-aatacataagagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatccaaa 38372526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 29390570 - 29390671
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatccaaa 316  Q
    |||||||||||||||||| |||||||||||||| ||||||  |||| |||||| |||| ||||| |||||  ||| ||||||||||||||||||||||||    
T  29390570 tttttcataaactacctttacaagcttatgaat-aatacatcaaagattatttatttgcataagttgttttccataaactcaaaaataagccaatccaaa 29390668  T
Q  317 cgg 319  Q
    |||    
T  29390669 cgg 29390671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 30181619 - 30181516
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||| ||||  |||| ||| | |||||| |||||||||||| ||||||    
T  30181619 tgttttttgataaactaccttgacaagcttatgaat-aatacataaaagcttctttatttgcctaagttgtattgcataagctcaaaaataagtcaatcc 30181521  T
Q  314 aaacg 318  Q
    |||||    
T  30181520 aaacg 30181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 44613489 - 44613568
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||||||| |||||||||||||| |||| | |||||||||||| |||| ||||||||||| ||||||    
T  44613489 ttgttttttcataaactaccttaacaagcttatgaat-aataaataaaagcttatttatttgcataagctgttttgcataa 44613568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 34922998 - 34922896
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagc-ataactcaaaaataagccaatccaa 315  Q
    |||||| ||||||||||||||||| ||||||||| |||||| |||||||||||| |||| ||||| ||||| ||  || || ||||||||||||||||||    
T  34922998 tttttttataaactaccttgacaaacttatgaat-aatacataaaagcttatttatttgcataagttgttttgcgttagctgaaaaataagccaatccaa 34922900  T
Q  316 acgg 319  Q
    ||||    
T  34922899 acgg 34922896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 18837289 - 18837189
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    |||||| || || |||||| |||||||||||||| |||||| | |||||||||| |||| ||| ||||||| |||||| |||||||||||||||||||||    
T  18837289 tttttttattaagtacctttacaagcttatgaat-aatacacataagcttatttatttgcatatgctgttttgcataagctcaaaaataagccaatccaa 18837191  T
Q  316 ac 317  Q
    ||    
T  18837190 ac 18837189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 37779303 - 37779395
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagccaatccaaa 316  Q
    |||||||||||||||||||||||||||||||||       | |||||||||||| |||| ||||||||||| | ||||   |||||||||||||||||||    
T  37779303 ttttttcataaactaccttgacaagcttatgaa-------ataaaagcttatttatttgcataagctgttttgtataagctaaaaataagccaatccaaa 37779395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 35809160 - 35809053
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||| || |||||||||| ||| ||||||  || |||||||| |||| ||||| || || | |||| ||| ||||||||||||||    
T  35809160 ttgttttttcataaactacgttaacaagcttataaat-aatacattaatgcttatttatttgcataagatgctttgtataagctctaaaataagccaatc 35809062  T
Q  313 caaacggac 321  Q
    |||||||||    
T  35809061 caaacggac 35809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 20888644 - 20888571
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaataca-aaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||| |||| |||| ||||||    
T  20888644 ttgttttttcataaactacctttgcaagcttatgaat-aatacataaaaagcttatttatttgcataaactgttt 20888571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 29378714 - 29378647
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||| || || ||| |||||| |||||||||||| |||| |||||||    
T  29378714 tgttttttcataaactaccttgacaaactcataaat-aatacataaaagcttatttatttgcataagct 29378647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 47511112 - 47511045
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||| ||| |||| |||||||||||||| |||||| |||||||||||| |||| |||||||    
T  47511112 tgttttttcatagacttccttaacaagcttatgaat-aatacataaaagcttatttatttgcataagct 47511045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 26331874 - 26331778
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    ||||||||||||||| ||||||||| | || ||| || |||||||||||| |||  ||||||| ||| |||||| |||||| ||||| ||||||||||    
T  26331874 ttcataaactaccttaacaagcttacg-atcaatgcagaaaagcttatttatttacataagctattttgcataagctcaaacataagtcaatccaaac 26331778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 7098118 - 7098221
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    |||||||||||||||| |||||||| ||||||||| ||| || |||| ||||||| |||| |||| || ||| ||| || ||| |||| ||| |||||||    
T  7098118 gttttttcataaactatcttgacaaacttatgaat-aattcataaaatcttatttatttgtataaactattttgcacaagctcgaaaacaagtcaatcca 7098216  T
Q  315 aacgg 319  Q
    |||||    
T  7098217 aacgg 7098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 14691315 - 14691366
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagctt 266  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||    
T  14691315 ttgttttttcataaattacattgacaagcttatgaat-aatacataaaagctt 14691366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 22032832 - 22032729
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||| || ||| |||||| ||| |||||| |||| | ||||| |||| ||||| |||||  ||||| ||| ||||||||| ||||    
T  22032832 ttgttttttcataaactacattaacatgcttataaat-aatacataaaaacatatttatttgcataagttgttttacataagctctaaaataagctaatc 22032734  T
Q  313 caaac 317  Q
    |||||    
T  22032733 caaac 22032729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 41094285 - 41094223
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||| |||||||| |||| ||||    
T  41094285 ttttttcataaaccaccttgacaagcttatgagt-aatacataaaggcttatttatttgcataa 41094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 41037819 - 41037755
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||| |||| |||||||    
T  41037819 ttttatcataaattaccttgacaagctt-tgaat-aatacataaaagcttatttatttgcataagct 41037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 29378762 - 29378823
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    |||||||||||| |||| ||||||| |||  ||||| |||||||||||| ||||||||||||    
T  29378762 aaaagcttatttatttgcataagctatttttcataaactcaaaaataagtcaatccaaacgg 29378823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 17944723 - 17944687
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||  |||||||||||||||||||||||||||    
T  17944723 ttgtttttctataaactaccttgacaagcttatgaat 17944687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 21027530 - 21027601
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||||| ||||| | || ||||| ||| |||||| |||| |||||||||||  |||||||||||    
T  21027530 tgttttttcataaaccaccttaataaacttataaat-aatacataaaaacttatttgtttacataagctgttt 21027601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 23356508 - 23356579
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||||||||  ||||||| |||  ||||| |||||    
T  23356508 tgttttttcataaattaccttgacaaacttgtgaat-aatacaaaaagccttatttattttcataagttgttt 23356579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 31613681 - 31613717
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  31613681 ttgttttttcataaactacattgacaagctaatgaat 31613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 216 - 317
Target Start/End: Original strand, 22809211 - 22809313
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaataca-aaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |||| ||||||||||| |||||| |||||||||||| |||| |    
T  22809211 gttttttcataaactaccttgacaagcttatgaat-aatatataaaaagcttatttatttgcataagctgttttgcataacctcaaaaataagtcaattc 22809309  T
Q  314 aaac 317  Q
    ||||    
T  22809310 aaac 22809313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 316
Target Start/End: Original strand, 53218056 - 53218158
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| || | ||||| ||||| |||||| || ||||||||| |||||    
T  53218056 ttgttttttcataaactaccttgacaagcttatgaat-aatacataaaatcttatttattcgcataagttgttttgcataagctaaaaaataagtcaatc 53218154  T
Q  313 caaa 316  Q
    ||||    
T  53218155 caaa 53218158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 40581096 - 40581205
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||||||||||| |||| ||||| ||||| |||||| |||||| ||||| ||||| ||    
T  40581096 ttttttcataaactaccttgacaagcttattaat-aatacataaaagcttatttatttgcataagttgttttgcataagctcaaagataagtcaatcaaa 40581194  T
Q  316 acggactctta 326  Q
    | |||| ||||    
T  40581195 atggaccctta 40581205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 34707730 - 34707832
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||||||| | |||   |||| ||||| |||||| |||||||||||| ||||||    
T  34707730 tgttttttcataaactaccttaacaagcttatgaat-aatacataaaagcttatatatttacgtaagttgttttgcataagctcaaaaataagtcaatcc 34707828  T
Q  314 aaac 317  Q
    ||||    
T  34707829 aaac 34707832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 217 - 318
Target Start/End: Original strand, 2086710 - 2086811
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||| ||||| ||||| |||| ||| |||||| ||||| |||||| |||  |||||||||||||||||| ||| |||||||||||||||||    
T  2086710 ttttttcataaaccacctttacaagattataaat-aatacataaaagtttatttatttacataagctgtttagcataagctctaaaataagccaatccaa 2086808  T
Q  316 acg 318  Q
    |||    
T  2086809 acg 2086811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 43079951 - 43080018
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||||||||| |||| |||||||    
T  43079951 tgttttttcataaactaccttgacaagcttatgaat-aacacataaaagcttatttatttgcataagct 43080018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 29270430 - 29270328
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||| || ||||| |||||||||||| |||||| |||||||||||| ||   ||||| ||||| |||||| |||||||||||| ||||||    
T  29270430 tgttttttcataaattatcttgaaaagcttatgaat-aatacataaaagcttatttattcctataagttgttttgcataagctcaaaaataagtcaatcc 29270332  T
Q  314 aaac 317  Q
    ||||    
T  29270331 aaac 29270328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 52421160 - 52421217
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  52421160 ttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttg 52421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 3870242 - 3870310
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||||||||||||||||  || ||| |||||||||||| |||| |||||||    
T  3870242 ttgttttttcataaactaccttgacaagcttatgaa-caaaacataaaagcttatttttttgcataagct 3870310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 4974382 - 4974274
Alignment:
Q  213 cttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaat 311  Q
    |||||||||||||||||||||||  |||| |||| ||| ||||||  |  |||||||| |||| |||||||| || |||||| ||| |||||||||||||    
T  4974382 cttgttttttcataaactaccttagcaagtttataaat-aatacattagtgcttatttatttgcataagctgctttgcataagctctaaaataagccaat 4974284  T
Q  312 ccaaacggac 321  Q
    ||||||||||    
T  4974283 ccaaacggac 4974274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 3845924 - 3845822
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||| |||||||||| |||||||||||||||||| |||| | |||||||||||| ||||  ||| |||| | |||||| |||||| |||||||||||     
T  3845924 tgttttgtcataaactagcttgacaagcttatgaat-aatatataaaagcttatttatttgtgtaatctgtgttgcataagctcaaatataagccaatct 3845826  T
Q  314 aaac 317  Q
    ||||    
T  3845825 aaac 3845822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 10448843 - 10448741
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||||||||||| || |||||||||| ||| |||||| ||| || ||||| |||| ||||| ||||| |||||| ||| ||||||||| |||||    
T  10448843 tgttttttcataaactacattaacaagcttataaat-aatacataaaggcatatttatttgcataagttgttttgcataagctctaaaataagctaatcc 10448745  T
Q  314 aaac 317  Q
    ||||    
T  10448744 aaac 10448741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 23555517 - 23555447
Alignment:
Q  252 aatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggac 321  Q
    |||||| |||||||||||| |||| |||| |||||| | |||| |||||||||||||||||||||||||||    
T  23555517 aatacataaaagcttatttatttgcataaactgtttcgtataagctcaaaaataagccaatccaaacggac 23555447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 52021313 - 52021248
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||| ||||| |||| |||||||    
T  52021313 ttttttcataaactaccttgacaatcttatgaat-aatacataaaagcatatttatttgcataagct 52021248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 317
Target Start/End: Complemental strand, 21296833 - 21296733
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||||||||||| || | ||||||| |||| | |||| ||||||| |||| ||||  ||||| |||||| |||||||||||| ||||||||    
T  21296833 ttttttcataaactaccttgataaacgtatgaat-aatagataaaaacttatttatttgcataaattgttttgcataatctcaaaaataagtcaatccaa 21296735  T
Q  316 ac 317  Q
    ||    
T  21296734 ac 21296733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 40240593 - 40240661
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| |||||||| ||| |||| |||||||    
T  40240593 ttgttttttcataaactacctagacacgcttatgaat-aatacataaaagcttctttatttgcataagct 40240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 28741231 - 28741333
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatcc 313  Q
    |||||||||||||||||| || |||||||||| ||  |||||| ||| |  ||||| |||| ||||||||||| |||| ||||| ||||||||| |||||    
T  28741231 tgttttttcataaactactttaacaagcttat-aagtaatacataaaggaatatttatttgcataagctgttttgcatgaactctaaaataagctaatcc 28741329  T
Q  314 aaac 317  Q
    ||||    
T  28741330 aaac 28741333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 585090 - 584985
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||||||||||||||||  | |||||| ||||| ||| || |||||||||||| |||| ||||  |||||  ||||| || ||||||||| |||||    
T  585090 ttgttttttcataaactacctcaagaagcttttgaat-aatgcataaaagcttatttatttgcataatgtgttttacataagctgaaaaataagtcaatc 584992  T
Q  313 caaacgg 319  Q
    |||||||    
T  584991 caaacgg 584985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 10272189 - 10272088
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcc 313  Q
    |||||||||| ||||| ||||||  ||||||||||| |||||| ||||| |||||| |||| || || ||||| |||||| || ||||||||| ||||||    
T  10272189 tgttttttcagaaactgccttga--agcttatgaat-aatacataaaagtttatttatttgcatgagttgttttgcataagctaaaaaataagtcaatcc 10272093  T
Q  314 aaacg 318  Q
    |||||    
T  10272092 aaacg 10272088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 51409463 - 51409395
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||||||| || |||||| |||| | ||||| |||||| |||| |||||||    
T  51409463 ttgttttttcataaactaccttgacaaactcatgaat-aataaataaaagattatttatttgcataagct 51409395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 10521223 - 10521164
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    |||| ||||||||||||| ||||||||||||||||| |||||| | |||||||||| ||||    
T  10521223 tgttgtttcataaactacattgacaagcttatgaat-aatacatataagcttatttatttg 10521164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 10667467 - 10667408
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttg 275  Q
    |||| ||||||||||||| ||||||||||||||||| |||||| | |||||||||| ||||    
T  10667467 tgttgtttcataaactacattgacaagcttatgaat-aatacatataagcttatttatttg 10667408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 50022017 - 50022075
Alignment:
Q  260 aaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    ||||||||||| |||| |||| |||||| |||||| ||| |||||||||||||||||||    
T  50022017 aaagcttatttatttgcataaactgttttgcataatctctaaaataagccaatccaaac 50022075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 3876279 - 3876351
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||||||||| || || |||||||| |||| | ||||||| |||| |||  |||||||||||    
T  3876279 ttgttttttcataaactaccttaactagattatgaat-aataaataaaagctaatttatttacataagctgttt 3876351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 7292749 - 7292649
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataactcaaaaataagccaatcca 314  Q
    |||||||||||||||||  ||||||| ||||||||| |||||| || ||||||| | |||| ||||| || ||  ||||| |  |||||||| |||||||    
T  7292749 tgttttttcataaactatattgacaaacttatgaat-aatacataagagcttatgtatttgcataagttgctttacataagttcaaaataagtcaatcca 7292651  T
Q  315 aa 316  Q
    ||    
T  7292650 aa 7292649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 5129833 - 5129896
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||  ||| ||||||| |||| ||||    
T  5129833 gttttttcataaagtacattgacaagcttatgaat-aatacattaaaacttatttatttgcataa 5129896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 32131510 - 32131408
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||| |||||||||||||||||||| |||| |||| ||| || |||||||||||| |||| ||||||||||| |||||| |||||||||||| |||||    
T  32131510 ttgtttattcataaactaccttgacaaacttaggaat-aatgcataaaagcttatttatttgcataagctgttttgcataagctcaaaaataagtcaatc 32131412  T
Q  313 caaa 316  Q
    ||||    
T  32131411 caaa 32131408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 35168458 - 35168516
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgttt 274  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  35168458 tgttttttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttgttt 35168516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 28879128 - 28879060
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| |||||||    
T  28879128 ttgttatttcataaactaccttgacaagcttatgaat-aatacataaaagcttatttatttgcataagct 28879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 280
Target Start/End: Original strand, 10298943 - 10299007
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| |||| ||||    
T  10298943 tgttttttcataaactaccttgacaagcttatgaatg-atacaaaaaagttaatttatttgcataa 10299007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 32975757 - 32975689
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||| |||||||||||||||||||||||||||||||| |||| | |||||||||||| |||| |||||||    
T  32975757 ttgtgttttcataaactaccttgacaagcttatgaat-aatatataaaagcttatttatttgcataagct 32975689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 35453479 - 35453412
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||| || ||||||||| |||||| |||||||||||| |||| |||||||    
T  35453479 tgttttttcataaactaccttgataaacttatgaat-aatacataaaagcttatttatttgcataagct 35453412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 14942492 - 14942391
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    |||||||||||||||| ||| |||||||||| ||| |||||| |||||||||||| | |  ||||| |||||  ||||| ||| ||||||||||||||||    
T  14942492 gttttttcataaactaacttaacaagcttataaat-aatacacaaaagcttatttatatacataagttgttttacataagctctaaaataagccaatcca 14942394  T
Q  315 aac 317  Q
    |||    
T  14942393 aac 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 287
Target Start/End: Complemental strand, 35285995 - 35285926
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||| ||||| ||||||||||| || ||| |||||||||||| |||| |||||||||||    
T  35285995 ttttttcataaactactttgacgagcttatgaat-aacacacaaaagcttatttatttgcataagctgttt 35285926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 34286583 - 34286647
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  34286583 tttttcacaaactaccttgacaagcttatgaat-aatacataaaagcttatttatttacataagct 34286647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 283
Target Start/End: Original strand, 32213043 - 32213106
Alignment:
Q  219 ttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||| | |||||||||||||||| |||||| |||||||||||| |||| |||||||    
T  32213043 ttttcataaactaacctgacaagcttatgaat-aatacataaaagcttatttatttgcataagct 32213106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 321
Target Start/End: Complemental strand, 13131479 - 13131393
Alignment:
Q  235 tgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggac 321  Q
    |||||| ||||||||| |||||| |||||||||||| |||| ||||  ||||| |||||| || |||||||||| |||||||||||||    
T  13131479 tgacaaacttatgaat-aatacataaaagcttatttatttgcataatttgttttgcataagctaaaaaataagcaaatccaaacggac 13131393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 38895726 - 38895661
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||| |||||||||||||| |||| | ||||| |||||| |||| |||||||    
T  38895726 ttttttcataaactaccttaacaagcttatgaat-aataaataaaagtttatttttttgcataagct 38895661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 321
Target Start/End: Complemental strand, 30974059 - 30973952
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||| |||| ||||  |||| ||| ||||||  || |||| ||| |||  |||||||| || |||||| ||| ||||||||||||||    
T  30974059 ttgttttttcataaactgccttaacaaatttataaat-aatacattaatgcttctttatttacataagctgctttgcataagctctaaaataagccaatc 30973961  T
Q  313 caaacggac 321  Q
    |||||||||    
T  30973960 caaacggac 30973952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 41145411 - 41145482
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat--gaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||| |||| |||||||||   |||| | |||||||||||| |||| |||||||    
T  41145411 ttgttttttcataaactaccttaacaaacttatgaataataataaataaaagcttatttatttgcataagct 41145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 13265547 - 13265489
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||| |||||| ||||||||||||||||| |||||| |||||||||||| |||| ||||    
T  13265547 ttcatgaactactttgacaagcttatgaat-aatacataaaagcttatttatttgcataa 13265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 250
Target Start/End: Original strand, 14709553 - 14709588
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14709553 tgttttttcataaactagcttgacaagcttatgaat 14709588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 42363335 - 42363439
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    |||||||||||||||||||| | || ||||| ||| |||||| |||| ||||||| |||| ||||||| |||   |||| ||| ||||||||| ||||||    
T  42363335 gttttttcataaactacctt-aaaaacttataaat-aatacataaaaacttatttatttgcataagctattttatataagctctaaaataagctaatcca 42363432  T
Q  315 aacggac 321  Q
    |||||||    
T  42363433 aacggac 42363439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 2669718 - 2669650
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||| |||| ||||| ||| ||||||  | ||||||||| |||| |||||||    
T  2669718 ttgttttttcataaactaccttaacaaacttataaat-aatacattagagcttatttatttgcataagct 2669650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 1089081 - 1089018
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||  ||| ||||||| |||| ||||    
T  1089081 gttttttcataaagtacattgacaagcttatgaat-aatacattaaaacttatttatttgcataa 1089018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 10213814 - 10213878
Alignment:
Q  261 aagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggactct 324  Q
    |||||||||| |||| ||||||| |||  ||||| ||||||||||| ||||||||||| ||||||    
T  10213814 aagcttatttatttgcataagctatttttcataagctcaaaaataatccaatccaaacagactct 10213878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 294
Target Start/End: Original strand, 16706116 - 16706195
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    ||||||||||||||||||| ||  ||| ||||||||| |||||| |||| | ||||| |||| |||||| |||| ||||||    
T  16706116 ttgttttttcataaactacattttcaaacttatgaat-aatacataaaaacatatttatttgcataagccgttttgcataa 16706195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 25671859 - 25671799
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataactcaaaaataagccaatccaaacgg 319  Q
    |||||||||||| |||  ||||||| |||  ||||||| | ||||||||||||||||||||    
T  25671859 aaaagcttatttatttacataagctatttttcataacttataaataagccaatccaaacgg 25671799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 42102174 - 42102072
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatcca 314  Q
    |||||||||||||||||||| | || ||||| ||| |||||| |||| ||||||| |||| |||||||||||   |||| ||| ||||||||  ||||||    
T  42102174 gttttttcataaactaccttaaaaa-cttataaat-aatacataaaaacttatttatttgcataagctgttttatataagctctaaaataagttaatcca 42102077  T
Q  315 aacgg 319  Q
    |||||    
T  42102076 aacgg 42102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 7267845 - 7267743
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| |||||| ||||  | ||| || ||||| |||||||||    
T  7267845 ttgttttttcataaactaccttggcaagcttatgaat-aatacataaaagcttatttgtttgcataagccgttttacttaagctaaaaaacaagccaatc 7267747  T
Q  313 caaa 316  Q
    ||||    
T  7267746 caaa 7267743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 217 - 317
Target Start/End: Original strand, 25430785 - 25430882
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    ||||||||||||||||||||||||||||    ||||||||| ||| |||||||| |||| |||||||||||  ||||| |||||||||||| ||||||||    
T  25430785 ttttttcataaactaccttgacaagctt----atgaatacataaatgcttatttatttgtataagctgttttacataagctcaaaaataagtcaatccaa 25430880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 2034245 - 2034313
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||| |||| |||||||    
T  2034245 ttgttttttcataaactaccttgacaaacttataaat-aatacataaaagcttatttatttgcataagct 2034313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 3211024 - 3211120
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaac 317  Q
    |||||||||||| ||||||||||||| | | |||||| |||||||||||| |||| ||||||||||| ||| || || ||||||||||| ||||||||    
T  3211024 ttcataaactacattgacaagcttatcagt-aatacataaaagcttatttatttgcataagctgttttgcacaagctaaaaaataagccgatccaaac 3211120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 8014856 - 8014757
Alignment:
Q  216 gttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatcca 314  Q
    ||||||||||||||||||||||||||||||||||| |||  | ||||||||| || |||| |||||||||||   || ||||| ||||||||||||||||    
T  8014856 gttttttcataaactaccttgacaagcttatgaat-aatgaataaaagcttacttatttgcataagctgttttctataaactc-aaaataagccaatcca 8014759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 24625917 - 24625818
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaa 316  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||| ||||| |||| ||| | ||| | || ||| |||||||||||| |||||||||    
T  24625917 tttttcataaactaccttaacaagcttatgaat-aatacataaaagcgtatttatttgcatatgttgtcttgcctaacctcaaaaataagacaatccaaa 24625819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 21025246 - 21025311
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||||||| ||||||||||| || |||||| |||||||||||| |||| |||||||    
T  21025246 ttttttcataaactaccttaacaagcttatgcat-aatacataaaagcttatttatttgcataagct 21025311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 30534046 - 30533978
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||||||||||||| || |||| ||||||||| |||||| |||||||||||| |||| |||||||||||    
T  30534046 tttttcataaactacatttacaaacttatgaat-aatacataaaagcttatttatttgcataagctgttt 30533978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 281
Target Start/End: Original strand, 1240630 - 1240693
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataag 281  Q
    ||||||| |||| ||||||||||||||||||||| |||||| |||||||||||| |||| |||||    
T  1240630 ttttttcgtaaattaccttgacaagcttatgaat-aatacataaaagcttatttatttgaataag 1240693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 6632729 - 6632626
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||||||||||||||||| || ||||| |||| ||| |||||| |||||| ||||| |||| ||||| ||||| | |||| ||| ||||||||| ||||    
T  6632729 ttgttttttcataaactacattaacaagtttataaat-aatacataaaagcatatttatttgcataagttgttttgaataagctctaaaataagctaatc 6632631  T
Q  313 caaac 317  Q
    |||||    
T  6632630 caaac 6632626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 6758693 - 6758618
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||||||| ||||||||||| || |||| | |||||||||||| |||| ||||| ||||| ||||||    
T  6758693 tttttcataaactaccttaacaagcttatggat-aataaacaaaagcttatttatttgcataagttgttttgcataa 6758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 9894833 - 9894731
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    |||||||||||| |||||| |||| ||||| ||| |||||| ||||| |||||| ||||  |||||||||| | |||| ||| ||||||||| |||||||    
T  9894833 ttttttcataaaataccttaacaaacttataaat-aatacataaaagattatttatttgcgtaagctgttttgtataagctcgaaaataagctaatccaa 9894735  T
Q  316 acgg 319  Q
    ||||    
T  9894734 acgg 9894731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 10874053 - 10873942
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctc-aaaaataagccaatc 312  Q
    |||||| |||||||||||||| |||||||||| ||| |||  | |||||||||||| | || ||||||| ||| |||||| ||| |||||||||||||||    
T  10874053 tgttttctcataaactaccttaacaagcttattaat-aat--ataaaagcttatttatatgcataagctattttgcataatctcaaaaaataagccaatc 10873957  T
Q  313 caaacggactcttat 327  Q
    ||||| || ||||||    
T  10873956 caaacagagtcttat 10873942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 10054448 - 10054383
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||| || |||| ||||||||| |||||| |||||||||||| |||| |||||||    
T  10054448 ttttttcataaactacatttacaaacttatgaat-aatacataaaagcttatttatttgcataagct 10054383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 10755299 - 10755364
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||  ||||||||||||||||||||| |||||  |||||||||||| |||| |||||||    
T  10755299 ttttttcataagttaccttgacaagcttatgaat-aatacgtaaaagcttatttatttgcataagct 10755364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 21891354 - 21891459
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    ||||| ||||||||||||| ||||||||||||||||| |||| |  ||| ||||||| |||| ||||||| ||  |||||| ||||||||| |  |||||    
T  21891354 ttgttatttcataaactacattgacaagcttatgaat-aatatatcaaaacttatttatttgcataagctattctgcataagctcaaaaattaatcaatc 21891452  T
Q  313 caaacgg 319  Q
    |||||||    
T  21891453 caaacgg 21891459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 321
Target Start/End: Original strand, 35111358 - 35111458
Alignment:
Q  221 ttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacgg 319  Q
    ||||| ||||| ||||| | |||||||||| | |||  |||||||| ||| |||| ||||||||||| |||||| || |||||| |||||||||||||||    
T  35111358 ttcattaactaacttgatatgcttatgaat-attacttaaaagcttgtttatttgcataagctgttttgcataagcttaaaaattagccaatccaaacgg 35111456  T
Q  320 ac 321  Q
    ||    
T  35111457 ac 35111458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 318
Target Start/End: Complemental strand, 10687380 - 10687273
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaat--gaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaa 310  Q
    |||||||| ||||||||||||| | | ||||||||||   ||||||  ||||||||||| |||| ||||||||||| | |||| |||||||||| | |||    
T  10687380 ttgtttttacataaactaccttaataggcttatgaataaaaatacatcaaagcttatttatttgcataagctgttttgaataagctcaaaaatacgtcaa 10687281  T
Q  311 tccaaacg 318  Q
    || |||||    
T  10687280 tcgaaacg 10687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 2255803 - 2255725
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa 294  Q
    |||||||||||||| |||||| ||||||||||||||  ||||| ||||||| |||| |||| |||||  |||| ||||||    
T  2255803 tgttttttcataaattaccttaacaagcttatgaat-catacataaaagctcatttatttgcataagtcgttttgcataa 2255725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 250
Target Start/End: Complemental strand, 13429524 - 13429489
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaat 250  Q
    |||||||||||||||||| |||||||||||||||||    
T  13429524 tgttttttcataaactactttgacaagcttatgaat 13429489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 312
Target Start/End: Original strand, 9201768 - 9201845
Alignment:
Q  235 tgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatc 312  Q
    |||||||||||||||| ||||||  ||||||||||  |||| ||||||||||| || ||| ||||||| ||||||||||    
T  9201768 tgacaagcttatgaat-aatacagcaaagcttattcatttgcataagctgttttgcgtaagctcaaaattaagccaatc 9201845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 2027193 - 2027261
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctg 284  Q
    ||||||||||||||||  |||||||| ||| ||||| ||| || |||||||||||| |||| ||||||||    
T  2027193 tgttttttcataaactgtcttgacaaacttctgaat-aatgcataaaagcttatttatttgcataagctg 2027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 507358 - 507330
Alignment:
Q  191 acttagggcctgtttggattggcttgttt 219  Q
    |||||||||||||||||||||||||||||    
T  507358 acttagggcctgtttggattggcttgttt 507330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 21871308 - 21871402
Alignment:
Q  222 tcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcat-aactcaaaaataagccaatccaaac 317  Q
    |||||||||||||||||||| |||| ||| |||||| ||||| ||| || |||| ||||| |||||  ||| |||| |||||||| |||||||||||    
T  21871308 tcataaactaccttgacaag-ttatcaat-aatacataaaagtttacttatttgcataagttgttttacataaactaaaaaataaaccaatccaaac 21871402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 29052402 - 29052335
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||| |||||| |||| ||||| ||| |||||| ||||| |||||| |||| |||||||    
T  29052402 tgttttttcataaaataccttaacaaacttataaat-aatacataaaagtttatttttttgtataagct 29052335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 35071397 - 35071329
Alignment:
Q  259 aaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaaacggactctta 326  Q
    |||||||||||| |||| ||||||| |||  ||||| || |||||||||||||||||||| | ||||||    
T  35071397 aaaagcttatttatttgcataagctatttttcataagctaaaaaataagccaatccaaacaggctctta 35071329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 24816 - 24743
Alignment:
Q  215 tgttttttcataaactacctt--gacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||||||||||||||||||  ||||||||||||||| |||||| |||||||||||| |||| |||||||||||    
T  24816 tgttttttcataaactaccttttgacaagcttatgaat-aatacataaaagcttatttatttgcataagctgttt 24743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 327
Target Start/End: Complemental strand, 178567 - 178457
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgtttagcataa-ctcaaaaataagccaatccaa 315  Q
    |||||||||||| |||||| | || ||||| ||| |||||| |||||||||||| |||| ||||| ||||||| ||||  |||||||||||  |||||||    
T  178567 ttttttcataaaataccttaagaaacttataaat-aatacataaaagcttatttatttgcataagttgtttagtataagttcaaaaataagttaatccaa 178469  T
Q  316 acggactcttat 327  Q
    |||||| |||||    
T  178468 acggacccttat 178457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 97223 - 97290
Alignment:
Q  215 tgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    |||||||||||||||||||||||| ||||||||||| | |||| || ||||||||| |||| |||||||    
T  97223 tgttttttcataaactaccttgactagcttatgaat-actacataatagcttatttatttgcataagct 97290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 280
Target Start/End: Original strand, 109011 - 109073
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataa 280  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||| |||||||| |||| ||||    
T  109011 ttttttcataaaccaccttgacaagcttatgagt-aatacataaaggcttatttatttgcataa 109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 43835 - 43904
Alignment:
Q  217 ttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    |||||| ||||||||||| ||||||||| ||||| |||||| |||| ||||||| |||| ||| |||||||    
T  43835 tttttttataaactacctcgacaagcttttgaat-aatacataaaaacttatttatttgcatatgctgttt 43904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 24405 - 24476
Alignment:
Q  214 ttgttttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagctgttt 287  Q
    ||||| ||| || |||||||||||||||||||||||| |||||| | |||| ||||| |||| |||||||||||    
T  24405 ttgttattttatcaactaccttgacaagcttatgaat-aatacatacaagc-tatttatttgcataagctgttt 24476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 14766 - 14830
Alignment:
Q  218 tttttcataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataagct 283  Q
    ||||||||||||||| || | || ||||||||| |||||| |||||||||||| |||| |||||||    
T  14766 tttttcataaactacatttaaaaacttatgaat-aatacataaaagcttatttatttgtataagct 14830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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