View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6860_high_39 (Length: 329)

Name: NF6860_high_39
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6860_high_39
NF6860_high_39
[»] chr3 (69 HSPs)
chr3 (1-250)||(24283552-24283800)
chr3 (13-219)||(14288172-14288377)
chr3 (1-219)||(42110013-42110231)
chr3 (1-250)||(35985512-35985758)
chr3 (1-218)||(14570624-14570840)
chr3 (150-276)||(14646966-14647094)
chr3 (1-211)||(13054720-13054940)
chr3 (1-74)||(12960676-12960749)
chr3 (1-102)||(13036232-13036333)
chr3 (150-219)||(19444649-19444719)
chr3 (150-219)||(19451215-19451285)
chr3 (1-74)||(15954238-15954311)
chr3 (1-66)||(54091046-54091111)
chr3 (1-65)||(12361816-12361880)
chr3 (1-65)||(32387330-32387394)
chr3 (150-212)||(12270482-12270544)
chr3 (256-325)||(12536759-12536825)
chr3 (1-62)||(4677996-4678057)
chr3 (1-74)||(12537007-12537080)
chr3 (1-74)||(18718424-18718497)
chr3 (1-62)||(41176309-41176370)
chr3 (1-62)||(41181447-41181508)
chr3 (1-62)||(44776035-44776096)
chr3 (1-62)||(44781219-44781280)
chr3 (150-218)||(8579238-8579306)
chr3 (1-65)||(11644102-11644166)
chr3 (1-65)||(12275083-12275147)
chr3 (1-65)||(12355317-12355381)
chr3 (270-325)||(13036031-13036084)
chr3 (150-218)||(14085593-14085661)
chr3 (150-218)||(14090994-14091062)
chr3 (1-65)||(20376554-20376618)
chr3 (1-65)||(30596171-30596235)
chr3 (150-218)||(49400593-49400661)
chr3 (1-65)||(53871958-53872022)
chr3 (1-64)||(13910364-13910427)
chr3 (1-64)||(13940820-13940883)
chr3 (1-64)||(13947309-13947372)
chr3 (128-216)||(54832381-54832469)
chr3 (1-62)||(8742194-8742255)
chr3 (1-62)||(8760364-8760425)
chr3 (1-74)||(12256396-12256469)
chr3 (1-102)||(15519291-15519392)
chr3 (1-66)||(16829253-16829318)
chr3 (1-66)||(16837775-16837840)
chr3 (1-65)||(11964223-11964287)
chr3 (1-73)||(12364200-12364272)
chr3 (1-65)||(12478991-12479055)
chr3 (1-65)||(13692756-13692820)
chr3 (1-65)||(15934242-15934306)
chr3 (1-65)||(16823095-16823159)
chr3 (1-65)||(19343579-19343643)
chr3 (176-227)||(11304902-11304952)
chr3 (193-227)||(11643939-11643973)
chr3 (128-212)||(51854278-51854362)
chr3 (128-212)||(53570407-53570491)
chr3 (153-210)||(10988813-10988870)
chr3 (150-211)||(24122258-24122319)
chr3 (5-54)||(29551713-29551762)
chr3 (1-65)||(10596966-10597030)
chr3 (1-65)||(10768531-10768595)
chr3 (1-65)||(12203111-12203175)
chr3 (151-218)||(12536873-12536940)
chr3 (1-65)||(14652026-14652090)
chr3 (1-65)||(18127855-18127919)
chr3 (1-65)||(18135625-18135689)
chr3 (1-65)||(45612429-45612493)
chr3 (5-65)||(46070422-46070482)
chr3 (1-65)||(49163940-49164004)
[»] chr5 (46 HSPs)
chr5 (1-250)||(21900961-21901208)
chr5 (1-327)||(18819708-18820033)
chr5 (1-250)||(10035945-10036192)
chr5 (1-219)||(25014384-25014602)
chr5 (1-248)||(21495694-21495941)
chr5 (1-102)||(21889383-21889484)
chr5 (150-219)||(43242503-43242572)
chr5 (1-73)||(16774350-16774422)
chr5 (1-65)||(23443517-23443581)
chr5 (1-102)||(15193247-15193348)
chr5 (150-211)||(22757818-22757879)
chr5 (5-65)||(5337658-5337718)
chr5 (183-219)||(26754490-26754526)
chr5 (1-65)||(28259229-28259293)
chr5 (1-64)||(9776307-9776370)
chr5 (1-64)||(17264073-17264136)
chr5 (1-64)||(17270555-17270618)
chr5 (1-60)||(21677550-21677609)
chr5 (1-64)||(22175841-22175904)
chr5 (177-227)||(19509074-19509123)
chr5 (74-216)||(24594062-24594205)
chr5 (150-211)||(1856482-1856543)
chr5 (151-227)||(20844004-20844079)
chr5 (150-211)||(21674452-21674513)
chr5 (1-65)||(757581-757645)
chr5 (1-65)||(6403783-6403847)
chr5 (1-65)||(20843864-20843928)
chr5 (1-65)||(20938428-20938492)
chr5 (1-65)||(22499855-22499919)
chr5 (146-227)||(25847210-25847292)
chr5 (146-227)||(25853791-25853873)
chr5 (1-64)||(37539261-37539324)
chr5 (1-64)||(37546805-37546868)
chr5 (189-227)||(22501895-22501933)
chr5 (189-227)||(22508476-22508514)
chr5 (151-227)||(428158-428234)
chr5 (189-218)||(598178-598207)
chr5 (151-219)||(15193130-15193198)
chr5 (151-219)||(21889534-21889602)
chr5 (1-65)||(428018-428082)
chr5 (1-65)||(5581593-5581657)
chr5 (1-65)||(15462211-15462275)
chr5 (1-65)||(19363365-19363429)
chr5 (1-65)||(19801201-19801265)
chr5 (1-65)||(21830335-21830399)
chr5 (1-65)||(22312111-22312175)
[»] chr8 (43 HSPs)
chr8 (1-250)||(22744532-22744779)
chr8 (1-218)||(20007064-20007280)
chr8 (1-214)||(14593885-14594099)
chr8 (1-250)||(33089706-33089953)
chr8 (1-250)||(20004811-20005059)
chr8 (1-249)||(20011216-20011464)
chr8 (1-122)||(20773296-20773417)
chr8 (1-122)||(20783090-20783211)
chr8 (1-219)||(25623793-25624011)
chr8 (50-211)||(21299313-21299474)
chr8 (1-63)||(21685368-21685430)
chr8 (1-63)||(21689717-21689779)
chr8 (1-65)||(41008754-41008818)
chr8 (1-65)||(11391880-11391944)
chr8 (150-212)||(3698665-3698727)
chr8 (58-211)||(10607759-10607914)
chr8 (1-62)||(18680809-18680870)
chr8 (150-218)||(23826202-23826270)
chr8 (1-64)||(9272461-9272524)
chr8 (1-63)||(19987480-19987541)
chr8 (159-212)||(19989908-19989961)
chr8 (1-62)||(22056552-22056613)
chr8 (1-62)||(31567117-31567178)
chr8 (1-62)||(31572338-31572399)
chr8 (150-211)||(44432923-44432984)
chr8 (5-65)||(12303988-12304048)
chr8 (1-65)||(20258283-20258347)
chr8 (1-65)||(21044913-21044977)
chr8 (1-64)||(1803792-1803855)
chr8 (176-218)||(16266001-16266042)
chr8 (189-219)||(21685212-21685242)
chr8 (189-219)||(21689561-21689591)
chr8 (189-227)||(35541967-35542005)
chr8 (190-227)||(27364268-27364305)
chr8 (1-65)||(1264859-1264923)
chr8 (176-216)||(3223817-3223856)
chr8 (174-218)||(9204483-9204526)
chr8 (1-65)||(14745793-14745857)
chr8 (1-65)||(16266143-16266207)
chr8 (1-65)||(21682974-21683037)
chr8 (1-45)||(22062884-22062928)
chr8 (1-45)||(36445066-36445110)
chr8 (1-65)||(37240370-37240434)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-250)||(13439-13685)
[»] scaffold0053 (2 HSPs)
scaffold0053 (1-216)||(45871-46085)
scaffold0053 (1-219)||(72039-72256)
[»] chr6 (48 HSPs)
chr6 (1-232)||(23106021-23106250)
chr6 (1-137)||(17414824-17414959)
chr6 (1-122)||(18786901-18787022)
chr6 (50-211)||(14725226-14725387)
chr6 (150-219)||(7430584-7430653)
chr6 (150-211)||(8759447-8759508)
chr6 (1-74)||(13127568-13127641)
chr6 (1-65)||(14132324-14132388)
chr6 (166-214)||(14995238-14995286)
chr6 (1-65)||(22797804-22797868)
chr6 (58-137)||(21470670-21470749)
chr6 (59-137)||(21477171-21477249)
chr6 (1-74)||(10470020-10470093)
chr6 (1-62)||(13200807-13200868)
chr6 (1-62)||(14033976-14034037)
chr6 (150-211)||(14593632-14593693)
chr6 (5-62)||(18315266-18315323)
chr6 (1-65)||(8068988-8069052)
chr6 (1-65)||(14615568-14615632)
chr6 (160-211)||(8767208-8767259)
chr6 (1-64)||(13941222-13941285)
chr6 (1-64)||(27561817-27561880)
chr6 (1-64)||(28289484-28289547)
chr6 (159-218)||(29266344-29266402)
chr6 (1-64)||(33681533-33681596)
chr6 (32-74)||(19587860-19587902)
chr6 (160-218)||(22347485-22347542)
chr6 (5-63)||(27768153-27768211)
chr6 (1-74)||(14374647-14374720)
chr6 (1-66)||(19468652-19468717)
chr6 (1-62)||(23835889-23835950)
chr6 (76-137)||(25773466-25773527)
chr6 (1-62)||(28359136-28359197)
chr6 (1-65)||(1593563-1593627)
chr6 (1-65)||(19727440-19727504)
chr6 (1-65)||(21724036-21724100)
chr6 (58-134)||(22888870-22888946)
chr6 (1-65)||(23232699-23232763)
chr6 (1-65)||(24721427-24721491)
chr6 (189-227)||(10469879-10469917)
chr6 (189-227)||(13127427-13127465)
chr6 (193-250)||(18315077-18315134)
chr6 (189-227)||(18787089-18787127)
chr6 (189-219)||(22797650-22797680)
chr6 (193-226)||(19468844-19468877)
chr6 (151-227)||(24721566-24721642)
chr6 (1-65)||(2709185-2709249)
chr6 (1-65)||(19819703-19819767)
[»] chr1 (41 HSPs)
chr1 (2-250)||(41315061-41315307)
chr1 (1-250)||(21986000-21986249)
chr1 (1-219)||(21733551-21733768)
chr1 (1-250)||(21744699-21744949)
chr1 (1-250)||(5381456-5381703)
chr1 (1-74)||(21409952-21410025)
chr1 (150-219)||(2332055-2332124)
chr1 (1-110)||(30490686-30490795)
chr1 (1-73)||(21698924-21698996)
chr1 (1-65)||(4231980-4232044)
chr1 (1-65)||(11140391-11140455)
chr1 (1-65)||(19859984-19860048)
chr1 (150-218)||(21543118-21543186)
chr1 (1-65)||(21921586-21921650)
chr1 (150-218)||(42094937-42095005)
chr1 (1-64)||(27281027-27281090)
chr1 (4-102)||(31926562-31926660)
chr1 (1-66)||(22434239-22434304)
chr1 (1-62)||(23065965-23066026)
chr1 (1-65)||(47484898-47484962)
chr1 (1-65)||(15315789-15315853)
chr1 (1-65)||(20243371-20243435)
chr1 (1-65)||(20595397-20595461)
chr1 (1-65)||(21735953-21736017)
chr1 (1-65)||(23713022-23713086)
chr1 (1-65)||(29553733-29553797)
chr1 (1-65)||(29601551-29601615)
chr1 (176-227)||(19045411-19045461)
chr1 (7-102)||(19336599-19336694)
chr1 (183-218)||(24960886-24960921)
chr1 (189-227)||(18419095-18419133)
chr1 (189-227)||(20396026-20396064)
chr1 (189-227)||(48428821-48428859)
chr1 (189-218)||(36918087-36918116)
chr1 (1-65)||(954374-954438)
chr1 (1-65)||(3706050-3706114)
chr1 (1-65)||(16882837-16882901)
chr1 (1-65)||(18026013-18026077)
chr1 (189-217)||(21963975-21964003)
chr1 (1-65)||(24237692-24237756)
chr1 (1-65)||(49328823-49328887)
[»] chr7 (65 HSPs)
chr7 (1-219)||(12695418-12695635)
chr7 (1-250)||(14249633-14249881)
chr7 (1-250)||(14265103-14265351)
chr7 (13-204)||(23443030-23443220)
chr7 (1-219)||(20752073-20752291)
chr7 (1-219)||(19152674-19152892)
chr7 (1-219)||(19146353-19146571)
chr7 (1-219)||(20745752-20745970)
chr7 (1-132)||(15143029-15143160)
chr7 (150-219)||(38829122-38829191)
chr7 (1-102)||(45186265-45186366)
chr7 (1-74)||(13318514-13318587)
chr7 (1-65)||(16073252-16073316)
chr7 (1-65)||(19463468-19463532)
chr7 (1-65)||(46681475-46681539)
chr7 (150-212)||(27565890-27565952)
chr7 (1-62)||(806280-806341)
chr7 (1-62)||(11631222-11631283)
chr7 (1-74)||(12462308-12462381)
chr7 (1-102)||(14580804-14580905)
chr7 (1-74)||(15103614-15103687)
chr7 (1-102)||(15436817-15436918)
chr7 (1-62)||(18048512-18048573)
chr7 (1-62)||(18054991-18055052)
chr7 (1-65)||(10520613-10520677)
chr7 (1-65)||(11340532-11340596)
chr7 (1-65)||(12555268-12555332)
chr7 (1-65)||(14129030-14129094)
chr7 (1-65)||(14135876-14135940)
chr7 (1-65)||(14432848-14432912)
chr7 (1-61)||(15097251-15097311)
chr7 (1-65)||(17181994-17182058)
chr7 (1-65)||(18436506-18436570)
chr7 (150-218)||(19617357-19617425)
chr7 (1-64)||(23200777-23200840)
chr7 (1-64)||(23506904-23506967)
chr7 (1-64)||(29796557-29796620)
chr7 (1-64)||(29800376-29800439)
chr7 (159-218)||(41781041-41781100)
chr7 (1-102)||(14168797-14168898)
chr7 (1-102)||(14173044-14173145)
chr7 (1-62)||(20579247-20579308)
chr7 (1-62)||(35962018-35962079)
chr7 (1-65)||(12454851-12454915)
chr7 (1-65)||(14287403-14287467)
chr7 (1-65)||(15722494-15722558)
chr7 (1-65)||(16475418-16475482)
chr7 (1-64)||(16184738-16184801)
chr7 (1-64)||(23665103-23665166)
chr7 (189-227)||(5186407-5186445)
chr7 (189-227)||(11340710-11340748)
chr7 (189-227)||(18436355-18436393)
chr7 (189-227)||(30602025-30602063)
chr7 (270-325)||(81122-81176)
chr7 (151-227)||(11854542-11854618)
chr7 (189-218)||(15085102-15085131)
chr7 (189-218)||(15436701-15436730)
chr7 (1-65)||(3328622-3328686)
chr7 (1-65)||(11879858-11879922)
chr7 (1-65)||(12429650-12429714)
chr7 (1-65)||(13963319-13963383)
chr7 (1-65)||(14280937-14281001)
chr7 (1-65)||(15085244-15085308)
chr7 (1-65)||(19600629-19600693)
chr7 (1-65)||(46348035-46348099)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-250)||(27124-27372)
[»] scaffold0244 (2 HSPs)
scaffold0244 (1-219)||(14430-14647)
scaffold0244 (1-219)||(621-838)
[»] scaffold0039 (2 HSPs)
scaffold0039 (1-329)||(2796-3132)
scaffold0039 (1-64)||(95582-95645)
[»] chr2 (50 HSPs)
chr2 (1-250)||(21120721-21120969)
chr2 (1-248)||(25365024-25365270)
chr2 (50-214)||(22795797-22795961)
chr2 (3-214)||(17634724-17634935)
chr2 (1-232)||(20913450-20913681)
chr2 (1-210)||(24668966-24669174)
chr2 (1-71)||(19036310-19036380)
chr2 (1-61)||(25106756-25106816)
chr2 (256-325)||(25268296-25268362)
chr2 (1-74)||(20724841-20724914)
chr2 (1-62)||(27786529-27786590)
chr2 (1-62)||(27791750-27791811)
chr2 (150-218)||(6743293-6743361)
chr2 (1-61)||(8889256-8889316)
chr2 (1-65)||(15642572-15642636)
chr2 (1-65)||(19702766-19702830)
chr2 (150-218)||(43694462-43694530)
chr2 (1-64)||(10684915-10684978)
chr2 (6-73)||(24659606-24659673)
chr2 (1-64)||(27295283-27295346)
chr2 (150-216)||(21132578-21132644)
chr2 (1-63)||(25174697-25174759)
chr2 (1-54)||(12573144-12573197)
chr2 (1-74)||(19648820-19648893)
chr2 (1-102)||(23753617-23753718)
chr2 (1-62)||(36801346-36801407)
chr2 (150-218)||(201683-201751)
chr2 (1-65)||(4078213-4078277)
chr2 (1-65)||(22860797-22860861)
chr2 (1-73)||(24653144-24653216)
chr2 (1-65)||(25268031-25268095)
chr2 (1-65)||(28970552-28970616)
chr2 (1-65)||(32910764-32910828)
chr2 (183-218)||(23149625-23149660)
chr2 (1-40)||(23291753-23291792)
chr2 (183-218)||(23561415-23561450)
chr2 (189-227)||(22012262-22012300)
chr2 (1-71)||(22012408-22012478)
chr2 (128-212)||(30195652-30195736)
chr2 (189-227)||(35243685-35243723)
chr2 (1-54)||(12579626-12579679)
chr2 (189-218)||(17582618-17582647)
chr2 (150-211)||(22841919-22841980)
chr2 (189-218)||(25106598-25106627)
chr2 (1-65)||(34844-34908)
chr2 (1-73)||(23333393-23333465)
chr2 (1-65)||(23672003-23672067)
chr2 (1-65)||(27730280-27730344)
chr2 (183-219)||(38929019-38929055)
chr2 (1-65)||(44090365-44090429)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-250)||(8330-8578)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-212)||(2061-2271)
scaffold0139 (1-65)||(26706-26770)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-219)||(13253-13471)
[»] scaffold0005 (3 HSPs)
scaffold0005 (4-250)||(17284-17529)
scaffold0005 (1-65)||(259507-259571)
scaffold0005 (1-65)||(265922-265986)
[»] chr4 (43 HSPs)
chr4 (4-250)||(14822180-14822425)
chr4 (1-65)||(13480286-13480350)
chr4 (1-74)||(21882332-21882405)
chr4 (1-102)||(30239850-30239951)
chr4 (1-65)||(16485474-16485538)
chr4 (1-65)||(18272093-18272157)
chr4 (1-62)||(15325702-15325763)
chr4 (1-62)||(41799232-41799293)
chr4 (1-62)||(42702061-42702122)
chr4 (1-62)||(51601353-51601414)
chr4 (1-62)||(51607234-51607295)
chr4 (1-62)||(53748035-53748096)
chr4 (1-65)||(1584648-1584712)
chr4 (1-65)||(15004425-15004489)
chr4 (1-65)||(15547387-15547451)
chr4 (1-65)||(16228403-16228467)
chr4 (1-64)||(635041-635104)
chr4 (1-64)||(16445761-16445824)
chr4 (150-211)||(11201406-11201468)
chr4 (150-211)||(11208137-11208199)
chr4 (1-62)||(16999448-16999509)
chr4 (1-74)||(18165560-18165633)
chr4 (183-219)||(13898853-13898889)
chr4 (1-65)||(14063544-14063608)
chr4 (1-65)||(23122434-23122498)
chr4 (1-65)||(23724078-23724142)
chr4 (258-309)||(30873599-30873651)
chr4 (1-65)||(41528369-41528433)
chr4 (2-65)||(14507032-14507095)
chr4 (5-64)||(20941099-20941158)
chr4 (146-227)||(29381890-29381972)
chr4 (176-214)||(3863288-3863326)
chr4 (176-214)||(3872045-3872083)
chr4 (189-227)||(7360164-7360202)
chr4 (189-227)||(19127467-19127505)
chr4 (189-227)||(52501467-52501505)
chr4 (189-218)||(5939843-5939872)
chr4 (1-74)||(13454557-13454630)
chr4 (151-219)||(16228259-16228327)
chr4 (151-227)||(53904477-53904553)
chr4 (191-227)||(3259118-3259154)
chr4 (1-65)||(3259270-3259334)
chr4 (1-65)||(7359987-7360051)
[»] scaffold0028 (3 HSPs)
scaffold0028 (1-234)||(91718-91949)
scaffold0028 (150-218)||(46026-46094)
scaffold0028 (150-218)||(51430-51498)
[»] scaffold0008 (1 HSPs)
scaffold0008 (13-250)||(124031-124265)
[»] scaffold2016 (1 HSPs)
scaffold2016 (13-204)||(1-191)
[»] scaffold0669 (1 HSPs)
scaffold0669 (1-137)||(931-1068)
[»] scaffold0046 (1 HSPs)
scaffold0046 (13-219)||(71397-71602)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-250)||(143490-143738)
scaffold0026 (2-218)||(36392-36606)
scaffold0026 (1-65)||(62500-62564)
scaffold0026 (183-211)||(67216-67244)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-219)||(5912-6131)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-250)||(42036-42284)
scaffold0049 (1-250)||(52731-52979)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-219)||(46332-46548)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-219)||(23823-24040)
scaffold0266 (1-198)||(2743-2939)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-250)||(40758-41007)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-218)||(21670-21885)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-65)||(55229-55293)
[»] scaffold0054 (3 HSPs)
scaffold0054 (1-110)||(61257-61366)
scaffold0054 (1-110)||(59694-59803)
scaffold0054 (151-219)||(59585-59653)
[»] scaffold0297 (2 HSPs)
scaffold0297 (150-329)||(796-973)
scaffold0297 (13-69)||(1053-1109)
[»] scaffold0178 (1 HSPs)
scaffold0178 (1-250)||(26261-26508)
[»] scaffold0326 (2 HSPs)
scaffold0326 (1-102)||(4638-4739)
scaffold0326 (1-102)||(19820-19921)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-250)||(18647-18895)
scaffold0165 (150-329)||(510-696)
scaffold0165 (1-69)||(362-430)
[»] scaffold0610 (1 HSPs)
scaffold0610 (49-214)||(6391-6557)
[»] scaffold1290 (1 HSPs)
scaffold1290 (1-102)||(517-618)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-65)||(30636-30700)
scaffold0102 (189-227)||(11455-11493)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-65)||(71915-71979)
scaffold0025 (1-74)||(77547-77620)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-137)||(10070-10205)
[»] scaffold0003 (2 HSPs)
scaffold0003 (13-211)||(100029-100227)
scaffold0003 (143-211)||(80307-80376)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-136)||(10060-10195)
scaffold0124 (1-62)||(41334-41395)
[»] scaffold1853 (1 HSPs)
scaffold1853 (1-110)||(92-201)
[»] scaffold0661 (1 HSPs)
scaffold0661 (1-110)||(3304-3413)
[»] scaffold0429 (1 HSPs)
scaffold0429 (256-309)||(237-289)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-74)||(12692-12765)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-74)||(8553-8626)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-74)||(152627-152700)
[»] scaffold0708 (1 HSPs)
scaffold0708 (1-65)||(2709-2773)
[»] scaffold0205 (1 HSPs)
scaffold0205 (1-65)||(28067-28131)
[»] scaffold0011 (6 HSPs)
scaffold0011 (1-65)||(147772-147836)
scaffold0011 (1-102)||(187084-187185)
scaffold0011 (1-102)||(196711-196812)
scaffold0011 (1-65)||(154959-155023)
scaffold0011 (150-218)||(173608-173676)
scaffold0011 (193-227)||(55899-55933)
[»] scaffold0298 (1 HSPs)
scaffold0298 (1-137)||(19153-19288)
[»] scaffold0035 (3 HSPs)
scaffold0035 (1-64)||(194-257)
scaffold0035 (1-65)||(11242-11306)
scaffold0035 (1-74)||(1361-1434)
[»] scaffold0490 (1 HSPs)
scaffold0490 (181-250)||(5903-5972)
[»] scaffold0203 (1 HSPs)
scaffold0203 (50-211)||(16417-16578)
[»] scaffold0061 (1 HSPs)
scaffold0061 (50-211)||(56354-56515)
[»] scaffold0017 (2 HSPs)
scaffold0017 (50-211)||(142118-142279)
scaffold0017 (1-74)||(2241-2314)
[»] scaffold0790 (1 HSPs)
scaffold0790 (15-170)||(5310-5465)
[»] scaffold0323 (1 HSPs)
scaffold0323 (1-74)||(8075-8148)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-74)||(28670-28743)
[»] scaffold0091 (4 HSPs)
scaffold0091 (5-102)||(22022-22119)
scaffold0091 (5-102)||(26219-26316)
scaffold0091 (189-219)||(21905-21935)
scaffold0091 (189-219)||(26102-26132)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-102)||(13636-13737)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-102)||(206980-207081)
[»] scaffold0001 (4 HSPs)
scaffold0001 (1-102)||(96675-96776)
scaffold0001 (1-65)||(448954-449018)
scaffold0001 (1-65)||(179781-179845)
scaffold0001 (1-65)||(511889-511953)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-65)||(3068-3132)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-65)||(19425-19489)
[»] scaffold0106 (5 HSPs)
scaffold0106 (183-219)||(37103-37139)
scaffold0106 (150-218)||(39463-39531)
scaffold0106 (162-219)||(29489-29545)
scaffold0106 (1-65)||(46045-46109)
scaffold0106 (1-65)||(50318-50382)
[»] scaffold0103 (2 HSPs)
scaffold0103 (1-65)||(20397-20461)
scaffold0103 (1-65)||(23123-23187)
[»] scaffold0076 (2 HSPs)
scaffold0076 (150-218)||(29192-29260)
scaffold0076 (150-218)||(34593-34661)
[»] scaffold0057 (1 HSPs)
scaffold0057 (183-219)||(1201-1237)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-65)||(171097-171161)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-65)||(371204-371268)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-64)||(48469-48532)
scaffold0010 (1-64)||(43403-43466)
[»] scaffold0947 (1 HSPs)
scaffold0947 (7-65)||(3497-3555)
[»] scaffold0555 (1 HSPs)
scaffold0555 (13-102)||(2215-2304)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-102)||(7746-7847)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-74)||(47137-47210)
scaffold0114 (1-65)||(42748-42812)
[»] scaffold0074 (1 HSPs)
scaffold0074 (8-65)||(21005-21062)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-62)||(14843-14904)
scaffold0063 (1-66)||(25044-25109)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-73)||(2957-3029)
[»] scaffold0518 (1 HSPs)
scaffold0518 (1-65)||(8301-8365)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-73)||(1282-1354)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-65)||(19325-19389)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-73)||(11611-11683)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-65)||(13775-13839)
[»] scaffold0173 (1 HSPs)
scaffold0173 (1-65)||(2120-2184)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-73)||(45019-45091)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-65)||(16722-16786)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-65)||(37954-38018)
scaffold0022 (1-65)||(136014-136078)
[»] scaffold0523 (1 HSPs)
scaffold0523 (176-227)||(6871-6921)
[»] scaffold0402 (1 HSPs)
scaffold0402 (7-102)||(15759-15854)
[»] scaffold0371 (1 HSPs)
scaffold0371 (159-214)||(6138-6193)
[»] scaffold0335 (1 HSPs)
scaffold0335 (183-218)||(7661-7696)
[»] scaffold0309 (1 HSPs)
scaffold0309 (196-250)||(9174-9228)
[»] scaffold0562 (1 HSPs)
scaffold0562 (176-214)||(2865-2903)
[»] scaffold0560 (1 HSPs)
scaffold0560 (188-218)||(181-211)
[»] scaffold0154 (1 HSPs)
scaffold0154 (189-227)||(17573-17610)
[»] scaffold1584 (1 HSPs)
scaffold1584 (1-74)||(1148-1221)
[»] scaffold0546 (1 HSPs)
scaffold0546 (150-211)||(9846-9907)
[»] scaffold0222 (1 HSPs)
scaffold0222 (143-211)||(4179-4248)
[»] scaffold0109 (1 HSPs)
scaffold0109 (150-211)||(3400-3461)
[»] scaffold0088 (1 HSPs)
scaffold0088 (189-218)||(32541-32570)
[»] scaffold1336 (1 HSPs)
scaffold1336 (1-69)||(37-105)
[»] scaffold0751 (1 HSPs)
scaffold0751 (151-218)||(1372-1439)
[»] scaffold0430 (1 HSPs)
scaffold0430 (1-69)||(13847-13914)
[»] scaffold0158 (1 HSPs)
scaffold0158 (1-65)||(15224-15288)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-65)||(14245-14309)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-65)||(7955-8019)
[»] scaffold0101 (1 HSPs)
scaffold0101 (1-65)||(6059-6123)
[»] scaffold0071 (1 HSPs)
scaffold0071 (1-65)||(50248-50312)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-65)||(321892-321956)
scaffold0004 (1-65)||(327580-327644)


Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 24283800 - 24283552
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24283800 actccccaaatcagtttacagatgtgtaatgaaatgctgtatgcaatcagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 24283701  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24283700 aatcaaagaaccaaaacctaacccaaatttccaattttcattcagaactatgttaaaccaaaattagaatttcattttacattattgaaagtaaacctca 24283601  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  24283600 cccttaccttaattcagat-gaaaaatctctacagaatctgattctcttg 24283552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 219
Target Start/End: Complemental strand, 14288377 - 14288172
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaacc 112  Q
    |||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| || |||| |||||| |||||||||||||||||| |    
T  14288377 agtttacagaagtgtaatgaaatgttgtatgcaaccagaatttatttctaacactaaaacaaagattcctacactcaattcacccaaaaatcaaagaatc 14288278  T
Q  113 aaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
     ||||||| || ||||||||||| |||| | |||||  ||||||||||||||| |||||| || |||| | |||||| ||||||||||||||||||||||    
T  14288277 -aaacctagacccaaattcccaa-tttcttccagaaacatgttaaaccaaaatcagaattacaatctatactattgagagtaaacctcacccttacctta 14288180  T
Q  212 attcagat 219  Q
    ||||||||    
T  14288179 attcagat 14288172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 42110013 - 42110231
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| | ||| |||||||||||||||| || ||||||||||||||||| ||||||||| |||  | ||||||||    
T  42110013 actccccaaaacagtttacagaagtgtaataacatgctgtatgcaaccagaacataattctaacactaaaacaatggtttctacactcttttcacccaaa 42110112  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||| || || ||||| ||||||||||| ||| |  ||||||||||||||| |||||| |||||| || |||||| ||||||||| ||||||||    
T  42110113 aatcaaagaatcataatctaacccaaattcccaaattttaaccagaactatgttaaaacaaaatcagaattacaatctacactattgaaagcaaacctca 42110212  T
Q  201 cccttaccttaattcagat 219  Q
    |||||||||||| ||||||    
T  42110213 cccttaccttaaatcagat 42110231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 35985512 - 35985758
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  ||||||||||   ||||| ||||||||||||||| | ||||  ||| ||||||||||||||| ||||||||| |||  | ||| ||||    
T  35985512 actccccaaaacagtttacagaaaagtaataaaatgttgtatgcaatctgaacacattcctaacactaaaacaatggtttctacactcttttccatccaa 35985611  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    || |||||||| || || ||||| |||||||||| ||  |   ||||||||||||||| |||||| |||||| || |||| | |||||||||||||||||    
T  35985612 aa-tcaaagaatcataatctaacccaaattcccatttaac---cagaactatgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctc 35985707  T
Q  200 acccttaccttaattcagatagaaaaatctctacag-aatctggttctcttg 250  Q
    |||||||||||||||||||| ||| || |||||||| |||||||||||||||    
T  35985708 acccttaccttaattcagat-gaacaaactctacagaaatctggttctcttg 35985758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 14570624 - 14570840
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||| |||||||   | ||||| | |||| ||||  ||    
T  14570624 actccccaaattagtttacagatatgtattaaaatgttgtatgcaatcagaacctatttctaacaccaaaacaacaatatctacacccaattcacc--aa 14570721  T
Q  101 aatcaaagaa-ccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcat-tctacattattgaaagtaaacct 198  Q
    || | |||||  |||| |||||| |||||||||||||||||| |||||   |||||||||||||| ||||||  || ||||   || || ||| ||||||    
T  14570722 aaactaagaattcaaagcctaacccaaattcccaattttcatccagaaacctgttaaaccaaaatcagaattcaatatctattctactg-aagcaaacct 14570820  T
Q  199 cacccttaccttaattcaga 218  Q
    ||||||||||||||||||||    
T  14570821 cacccttaccttaattcaga 14570840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 14647094 - 14646966
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaatctctacagaatctggttctctt 249  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||||||||||||||||||||||||||| ||| ||  || ||| |||||| |||||||    
T  14647094 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaattcagat-gaagaaattccacaaaatctgattctctt 14646996  T
Q  250 g---cttattcttggtttttctccccaaaa 276  Q
    |   |||  |||||||||||||||| ||||    
T  14646995 ggctcttcctcttggtttttctcccaaaaa 14646966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 13054720 - 13054940
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccaccc--- 97  Q
    ||||||||||  |||||||||| ||||||| ||||||||||||||||| |||   | ||||||||||||||||| ||||||||| |||  |||| ||       
T  13054720 actccccaaaacagtttacagaagtgtaataaaatgttgtatgcaacctgaataca-ttctaacactaaaacaatggtttctacactctttccatccaaa 13054818  T
Q  98 -------aaaaatcaaagaaccaaaacct-aacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaa 189  Q
           ||||||||||||| || ||  | ||| ||||||||||||||||   ||| |  ||||||||||||||| ||||||    |||| | |||||||    
T  13054819 aaaaaataaaaatcaaagaatcacaatttaaacccaaattcccaattttctaccaggaacatgttaaaccaaaatcagaattatgatctagactattgaa 13054918  T
Q  190 agtaaacctcacccttacctta 211  Q
    ||||||||||||||||||||||    
T  13054919 agtaaacctcacccttacctta 13054940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12960749 - 12960676
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||||||||||  |||||||    
T  12960749 actccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacaa 12960676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13036333 - 13036232
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||| ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  13036333 actccccaaatcagtttacagatatgaaatgaaatggtgtatgcaatcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 13036234  T
Q  101 aa 102  Q
    ||    
T  13036233 aa 13036232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 19444649 - 19444719
Alignment:
Q  150 atgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||| |||||||||||||| || |||| | |||||||||||||| ||||||||||||||||||||||    
T  19444649 atgttaaatccaaaattagaattacaatctatactattgaaagtaaacatcacccttaccttaattcagat 19444719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 19451215 - 19451285
Alignment:
Q  150 atgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||| |||||||||||||| || |||| | |||||||||||||| ||||||||||||||||||||||    
T  19451215 atgttaaatccaaaattagaattacaatctatactattgaaagtaaacttcacccttaccttaattcagat 19451285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15954311 - 15954238
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||| | |||||||||||||  ||  ||||||||||||||||||||||||||||||||||  |||||||    
T  15954311 actccccaagtcagtttacagatgtaaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacaa 15954238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 54091111 - 54091046
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacac 66  Q
    |||||||||||||||||||||||   ||||||| |||| ||||||||||||||||| |||||||||    
T  54091111 actccccaaattagtttacagatacataatgaagtgttctatgcaaccagaacctaattctaacac 54091046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12361880 - 12361816
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||||||| |  |||||||||||  ||||||||||||||||||    
T  12361880 actccccaaattggtttacagatgtgtaataacttgttgtatgcactcagaacctatttctaaca 12361816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32387394 - 32387330
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| ||||||||||||||||| ||||||||    
T  32387394 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccagaacctaattctaaca 32387330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 12270544 - 12270482
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaa 212  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||||||||||||||||||||    
T  12270544 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaa 12270482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 325
Target Start/End: Complemental strand, 12536825 - 12536759
Alignment:
Q  256 tcttggtttttctccccaaaacttgtctgtacataaaagcagttctgacttctcccttttcttaactccc 325  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||||  |||||| ||||||||    
T  12536825 tcttggtttttctccc-aaaacttgtctgtatgtaaaagcagttctgacttct--cttttcctaactccc 12536759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4677996 - 4678057
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  4677996 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 4678057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12537080 - 12537007
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||||   ||  || |||||||||||||||||||||| |||||||| || |||||    
T  12537080 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaacattagaacaa 12537007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18718497 - 18718424
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||  || |||| ||||||||||  |||||||    
T  18718497 actccccaaattagtttacagatatgaaatgaaaggttgtatgcactcataacccatttctaacatcaaaacaa 18718424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41176309 - 41176370
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  41176309 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 41176370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41181447 - 41181508
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  41181447 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 41181508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44776035 - 44776096
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  44776035 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 44776096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44781219 - 44781280
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  44781219 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 44781280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 8579306 - 8579238
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  8579306 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 8579238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11644166 - 11644102
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||| ||||||||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  11644166 actccctaaattagtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 11644102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12275083 - 12275147
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||||   |  ||||| ||||||||||||||||||||||||||||    
T  12275083 actccccaaatcagtttacagatgtaatactaaatgctgtatgcaaccagaacctatttctaaca 12275147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12355381 - 12355317
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||||||| |  || ||||||||  ||||||||||||||||||    
T  12355381 actccccaaattggtttacagatgtgtaataacttgctgtatgcactcagaacctatttctaaca 12355317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 13036084 - 13036031
Alignment:
Q  270 cccaaaacttgtctgtacataaaagcagttctgacttctcccttttcttaactccc 325  Q
    |||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||    
T  13036084 cccaaaacttgtctgtacgtaaaagcagttctgacttct--cttttcctaactccc 13036031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 14085593 - 14085661
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  14085593 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 14085661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 14090994 - 14091062
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  14090994 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 14091062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20376618 - 20376554
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   ||||||| |||| ||||||||||||||| | ||||||||    
T  20376618 actccccaaattagtttacagataaataatgaagtgttctatgcaaccagaacccaattctaaca 20376554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30596235 - 30596171
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| | ||||||||||||||| ||||||||    
T  30596235 actccccaaattagtttacagataagcaatgaagtgttctgtgcaaccagaacctaattctaaca 30596171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 49400593 - 49400661
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  49400593 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 49400661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53872022 - 53871958
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   |||| || |||| ||||||||||||||||| ||||||||    
T  53872022 actccccaaattagtttacagatacataattaagtgttttatgcaaccagaacctaattctaaca 53871958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13910364 - 13910427
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  13910364 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 13910427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13940820 - 13940883
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  13940820 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 13940883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13947309 - 13947372
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  13947309 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 13947372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 54832469 - 54832381
Alignment:
Q  128 ttcccaattttcatacagaactatgttaaac-caaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaattca 216  Q
    |||||||||||||  ||||||| |||||||| |||||| ||||||| |  |||||| ||||||| ||||||||||||||||||||||||||    
T  54832469 ttcccaattttcac-cagaactctgttaaacacaaaatcagaatttaaaatctacactattgaa-gtaaacctcacccttaccttaattca 54832381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8742255 - 8742194
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||| ||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  8742255 actccccaaattactttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 8742194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 8760425 - 8760364
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||| ||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  8760425 actccccaaattactttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 8760364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12256396 - 12256469
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| || ||| ||| ||||||||||  ||||||| |||||| |||  |||||||    
T  12256396 actccccaaattagtttacagatatgaaataaaaggttgtatgcactcagaacccatttctgacatcaaaacaa 12256469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 15519291 - 15519392
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  || |||||||||||||||  | |||||   || |||| |||||| ||||||||    
T  15519291 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcataacctatttctaacatcagaacaacaattcctacactcaattcacccaaa 15519390  T
Q  101 aa 102  Q
    ||    
T  15519391 aa 15519392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16829318 - 16829253
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacac 66  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| ||| |||| ||| |||||||    
T  16829318 actccccaaattagtttacagatatgcaatgaaaagttatatgcacccataacccattcctaacac 16829253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16837840 - 16837775
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacac 66  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| ||| |||| ||| |||||||    
T  16837840 actccccaaattagtttacagatatgcaatgaaaagttatatgcacccataacccattcctaacac 16837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11964287 - 11964223
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||| || ||||||||||||||||| |  || ||||||||  ||||||||||||||||||    
T  11964287 actccccaatttggtttacagatgtgtaataacttgctgtatgcactcagaacctatttctaaca 11964223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12364200 - 12364272
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    ||||||||||||||||||||||| || |||||| |||||||  ||  ||||||| ||||||||| | ||||||    
T  12364200 actccccaaattagtttacagatatgaaatgaattgttgtacacactcagaacccatttctaaccccaaaaca 12364272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12479055 - 12478991
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||||||| |  || ||||||||  || |||||||||||||||    
T  12479055 actccccaaattggtttacagatgtgtaataacttgctgtatgcactcaaaacctatttctaaca 12478991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 13692756 - 13692820
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||| ||||  |||  || ||||||||||||| |||||||| ||||||||    
T  13692756 actccccaaattagtttactgatgcataactaagtgttgtatgcaactagaacctaattctaaca 13692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15934306 - 15934242
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||| | |||||||||||||  ||  ||||| |||||||||||| |||||||||||||||    
T  15934306 actccccaagtcagtttacagatgtaaaactaaatgctgtatgcaaccataacctatttctaaca 15934242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16823159 - 16823095
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||| ||||| ||||||||||||| |||| |||||||||||||   || |||||||||||||||    
T  16823159 actcctcaaatcagtttacagatgtataattaaatgttgtatgccctcataacctatttctaaca 16823095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19343643 - 19343579
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||| |||||||||  | || ||| |||| ||||||||||||||||| ||||||||    
T  19343643 actccccaaattaatttacagataagcaaagaagtgttctatgcaaccagaacctaattctaaca 19343579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 11304952 - 11304902
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  11304952 tctacactattgaa-gtaaacctcacccttaccttaattcagaaagacaaat 11304902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 11643973 - 11643939
Alignment:
Q  193 aaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||||||||||||||| ||||||||    
T  11643973 aaacctcacccttaccttaattcagaaagaaaaat 11643939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 51854362 - 51854278
Alignment:
Q  128 ttcccaattttcatacagaactatgttaaac-caaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaa 212  Q
    |||||||||||||  ||||||| |||||||| |||||| ||||||| |  |||||| ||||||| ||||||||||||||||||||||    
T  51854362 ttcccaattttcac-cagaactctgttaaacacaaaatcagaatttaaaatctacactattgaa-gtaaacctcacccttaccttaa 51854278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 53570491 - 53570407
Alignment:
Q  128 ttcccaattttcatacagaactatgttaaac-caaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaa 212  Q
    |||||||||||||  ||||||| |||||||| |||||| ||||||| |  |||||| ||||||| ||||||||||||||||||||||    
T  53570491 ttcccaattttcac-cagaactctgttaaacacaaaatcagaatttaaaatctacactattgaa-gtaaacctcacccttaccttaa 53570407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 10988870 - 10988813
Alignment:
Q  153 ttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctt 210  Q
    ||||| |||||| ||||||  | |||| | ||||||||||||||||||||||||||||    
T  10988870 ttaaatcaaaatcagaattataatctatactattgaaagtaaacctcacccttacctt 10988813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 24122319 - 24122258
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| | |||| || |||| | ||||||||||||| |||||||||||||||    
T  24122319 atgttaaatcaaaatcaaaattacaatctatactattgaaagtaaatctcacccttacctta 24122258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 29551713 - 29551762
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacc 54  Q
    |||||||||||||||||||   ||||||| |||| |||||||||||||||    
T  29551713 cccaaattagtttacagataaataatgaagtgttctatgcaaccagaacc 29551762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10597030 - 10596966
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| |||||||||| || ||||||| ||| ||||||  || |||| ||||||||||    
T  10597030 actccccaaatttgtttacagatatgaaatgaaaggttatatgcactcaaaacccatttctaaca 10596966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10768531 - 10768595
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||| | ||||||||    
T  10768531 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaaca 10768595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12203111 - 12203175
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || ||||||||||| | |||||||| ||||||||    
T  12203111 actccccaaattagtttacagatgcaaaactaagtgttgtatgcatctagaacctaattctaaca 12203175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 12536940 - 12536873
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||||||||| ||||||  ||  ||||| ||||||| | ||||||||||||||||||||||||||    
T  12536940 tgttaaaccaaaatcagaattcaataactacactattgaa-gcaaacctcacccttaccttaattcaga 12536873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14652090 - 14652026
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||| | ||||||||||    
T  14652090 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaatccatttctaaca 14652026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18127919 - 18127855
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||  |||||||||||| ||| |  ||||||||||   ||||||||||||||||||    
T  18127919 actccccaaattgatttacagatgtgaaataacttgttgtatgcgctcagaacctatttctaaca 18127855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18135689 - 18135625
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  || |||||||   ||||||||||||||||||    
T  18135689 actccccaaattggtttacagatgtgaaataacttggtgtatgcgctcagaacctatttctaaca 18135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45612429 - 45612493
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||| | ||||||||    
T  45612429 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaaca 45612493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 46070482 - 46070422
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||  | |||||| |||| ||| || |||||||||| ||||||||    
T  46070482 cccaaattagtttacagataggcaatgaagtgttctatacatccagaacctaattctaaca 46070422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49163940 - 49164004
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||||| | | |  || ||||||||  || |||||||||||||||    
T  49163940 actccccaaattagtttacagatgtgaattaacttgctgtatgcactcataacctatttctaaca 49164004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21901208 - 21900961
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21901208 actccccaaatcagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa-ggtttctaccctcaatccacccaaa 21901110  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||    
T  21901109 aatcaaagaaccaaaacctaacccaaatttccaattttcatccagaactatgttaaatcaaaatcaaaatttcattctacattattgaaagtaaacctca 21901010  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21901009 cccttaccttaattcagat-gaaaaatctctacagaatctggttctcttg 21900961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 18819708 - 18820033
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || |||| |||||| ||||||||    
T  18819708 actcaccaaattagtttatagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacagtgattcctacactcaattcacccaaa 18819807  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    || ||| ||| ||||| ||||| ||| ||||||||||  |  |||||  ||||||||||||| | |||||| || ||||||  |||||| | ||||||||    
T  18819808 aaccaatgaatcaaaatctaacccaatttcccaatttctac-cagaaacatgttaaaccaaattcagaattacaatctacaccattgaa-gcaaacctca 18819905  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttgcttattcttggtttttct----ccccaaaacttgtctgtacataaaagca 296  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||   || ||||     ||||||| |||||||||| ||||||||    
T  18819906 cccttaccttaattcagat-gaaaaatctctacagaatctggttctcttggctcttctcccttgttcttggctcccaaaatttgtctgtacgtaaaagca 18820004  T
Q  297 gttctgacttctcccttttcttaactcccaa 327  Q
    ||||||||||||  |||||| ||||||||||    
T  18820005 gttctgacttct--cttttcctaactcccaa 18820033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 10035945 - 10036192
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||  ||||||  | || |||| |||||  ||||||||    
T  10035945 actccccaaattagtttacagatgtgtaatgaaatgctgtatgcaaccagaacctatttataacatcaaaacagtgattcctacactcaaatcacccaaa 10036044  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    || ||||||| |||| |||||| |||| |||  | ||||   || ||   |||||||||||||| |||||| || ||||||||| |||||||||||||||    
T  10036045 aaccaaagaatcaaa-cctaactcaaaatcctcaatttctaccataaacctgttaaaccaaaatcagaattacaatctacattactgaaagtaaacctca 10036143  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||||||||||||| |||||||||||||  | |||||||||||||    
T  10036144 cccttaccttaattcagat-gaaaaatctctacgaattctggttctcttg 10036192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 25014384 - 25014602
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||| |||||| ||||||||||||| |||  ||||| ||||||||| ||||||||||||||||||  ||| ||  | ||||||| ||| || ||||||||    
T  25014384 actcgccaaatcagtttacagatgtataactaaatgatgtatgcaatcagaacctatttctaacatcaaaccagtgatttctacactctattcacccaaa 25014483  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatt-tcattctacattattgaaagtaaacctc 199  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||   | |||| | || || |||||||||||    
T  25014484 aaccaaagaaccaaaacctaacccaaattcccaattttcatacagaacaatgttaaaccaaaatcagaattaaaaatctatactactg-aagtaaacctc 25014582  T
Q  200 acccttaccttaattcagat 219  Q
     |||||||||| ||||||||    
T  25014583 ccccttaccttgattcagat 25014602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 21495694 - 21495941
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| ||||||||||||||| | | ||  | | ||||||||||||||| | || |||| |||||| ||||||||    
T  21495694 actccccaaaacagtttacagaagtgtaataaaatgttgtatgcaatctgcacacaatcctaacactaaaacaatgattcctacactcaattcacccaaa 21495793  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| |||| |||| || ||||||||||||||  |  || ||    ||||||||||||| |||||| || |||| | |||||||||||||||||    
T  21495794 aatcaaagaatcaaa-cctagacccaaattcccaatttctac-cataaaccggttaaaccaaaatcagaattacaatctatactattgaaagtaaacctc 21495891  T
Q  200 acccttaccttaattcagatagaaaaatctc--tacagaatctggttctct 248  Q
    |||||||||||||||||||| ||| ||||||  |||| |||||||||||||    
T  21495892 acccttaccttaattcagat-gaacaatctctatacaaaatctggttctct 21495941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21889383 - 21889484
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||| ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  21889383 actccccaaatcagtttacagatatgaaatgaaatgctgtatgcaatcagaacctatttctaacataaaaccagtgattcctacactcaattcacccaaa 21889482  T
Q  101 aa 102  Q
    ||    
T  21889483 aa 21889484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 43242572 - 43242503
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||| |||||| |||||| || |||| | |||||||||||||||||||||||||||||||||||||    
T  43242572 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaattcagat 43242503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16774422 - 16774350
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    |||||||||||||||||||||||   ||||||| |||| ||||||||||||||||| ||||||||| ||||||    
T  16774422 actccccaaattagtttacagatacataatgaagtgttctatgcaaccagaacctaattctaacaccaaaaca 16774350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23443581 - 23443517
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||||||    
T  23443581 actccccaaattagtttacagatatgaaactaaatgctgtatgcaaccagaacctatttctaaca 23443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15193348 - 15193247
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||  ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  15193348 actccccaaatcagtttacagatatgaaatgaaatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 15193249  T
Q  101 aa 102  Q
    ||    
T  15193248 aa 15193247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 22757879 - 22757818
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | |||||||||||||||||||||||||||||    
T  22757879 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 22757818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 5337718 - 5337658
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||  | |||||| |||| ||||||||||||||||| ||||||||    
T  5337718 cccaaattagtttacagataagcaatgaagtgttttatgcaaccagaacctaattctaaca 5337658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 26754490 - 26754526
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  26754490 tattgaaagtaaacctcacccttaccttaattcagat 26754526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28259293 - 28259229
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   ||||||| |||| ||||||||||||||| | ||||||||    
T  28259293 actccccaaattagtttacagataaataatgaagtgttctatgcaaccagaacccaattctaaca 28259229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9776307 - 9776370
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  9776307 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 9776370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17264136 - 17264073
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  17264136 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 17264073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17270618 - 17270555
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  17270618 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 17270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21677609 - 21677550
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttc 60  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||    
T  21677609 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttc 21677550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22175841 - 22175904
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  22175841 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 22175904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 19509074 - 19509123
Alignment:
Q  177 ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  19509074 ctacattattgaa-gtaaacctcacccttaccttaattcagaatgaaaaat 19509123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 24594205 - 24594062
Alignment:
Q  74 aaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatt-t 172  Q
    |||||||| || |||  |||| ||||||||| ||||| |||| |  ||| ||| |||| |||||| | ||||||||| |||||||||||||||||||| |    
T  24594205 aaggtttccacactctttccatccaaaaatctaagaatcaaacctaaacccaatttccaaattttta-acagaactacgttaaaccaaaattagaattat 24594107  T
Q  173 cat--tctacattattgaaagtaaacctcacccttaccttaattca 216  Q
     ||  |||||| ||||| ||| ||||||||||||||||| ||||||    
T  24594106 aataatctacactattg-aagcaaacctcacccttacctgaattca 24594062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 1856543 - 1856482
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| |||||||||||||||    
T  1856543 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctta 1856482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 20844004 - 20844079
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||| ||||||| ||  ||||||||||||| | ||||||||| |||||||||||||||| ||||||||    
T  20844004 tgttaaaccaaaatcagaatttaataactacattattgaa-gcaaacctcactcttaccttaattcaga-agaaaaat 20844079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 21674513 - 21674452
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| |||||||||||||||    
T  21674513 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctta 21674452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 757645 - 757581
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||| |||| |||||||||||||| ||||||| ||| ||||||  ||||||| ||||||||||    
T  757645 actccctaaatcagtttacagatgtgcaatgaaaggttatatgcactcagaacccatttctaaca 757581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6403847 - 6403783
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  || ||||||||  ||||||||||||||||||    
T  6403847 actccccaaattggtttacagatgtgaaataacttgatgtatgcactcagaacctatttctaaca 6403783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20843864 - 20843928
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||| ||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  20843864 actccccaaattaatttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaaca 20843928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20938428 - 20938492
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  20938428 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 20938492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22499919 - 22499855
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  22499919 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 22499855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 25847210 - 25847292
Alignment:
Q  146 aactatgttaaac-caaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||| |||||||| |||||| ||||||| ||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||    
T  25847210 aactctgttaaacacaaaatcagaatttaataactacattcttgaa-gtaaacctcacccttaccttaattcagaatgaaaaat 25847292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 25853791 - 25853873
Alignment:
Q  146 aactatgttaaac-caaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||| |||||||| |||||| ||||||| ||  ||||||| ||||| ||||||||||||||||||||||||||||  |||||||    
T  25853791 aactctgttaaacacaaaatcagaatttaataactacattcttgaa-gtaaacctcacccttaccttaattcagaatgaaaaat 25853873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37539324 - 37539261
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||||| |||||||    
T  37539324 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacctaattctaac 37539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37546868 - 37546805
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||||| |||||||    
T  37546868 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacctaattctaac 37546805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 22501895 - 22501933
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  22501895 aagtaaacctcacccttaccttaattcagaatgaaaaat 22501933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 22508476 - 22508514
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  22508476 aagtaaacctcacccttaccttaattcagaatgaaaaat 22508514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 428158 - 428234
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||| ||||||  ||  ||||| ||||||| | ||||||||||||||||||||||||||  |||||||    
T  428158 tgttaaaccaaaatcagaattcaataactacactattgaa-gcaaacctcacccttaccttaattcagaaggaaaaat 428234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 598178 - 598207
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  598178 aagtaaacctcacccttaccttaattcaga 598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 15193198 - 15193130
Alignment:
Q  151 tgttaaaccaaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||| ||||||  |  |||||| || |||| |||||||||||||||||||||||||||||    
T  15193198 tgttaaaccaaaatcagaattaaacatctacactactgaa-gtaaacctcacccttaccttaattcagat 15193130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 21889534 - 21889602
Alignment:
Q  151 tgttaaaccaaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||| ||||||  |  |||||| || |||| |||||||||||||||||||||||||||||    
T  21889534 tgttaaaccaaaatcagaattaaaaatctacactactgaa-gtaaacctcacccttaccttaattcagat 21889602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 428018 - 428082
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||| ||||||||||||||||||   ||  || |||| ||||||||||||||||| ||||||||    
T  428018 actccgcaaattagtttacagatgcaaaactaagtgttatatgcaaccagaacctaattctaaca 428082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5581657 - 5581593
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||| | ||||||||    
T  5581657 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaaca 5581593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15462211 - 15462275
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||| | ||||||||    
T  15462211 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaaca 15462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19363365 - 19363429
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || |||||| | ||||||||||||| ||||||||    
T  19363365 actccccaaattagtttacagatgcaaaactaagtgttgtctacaaccagaacctaattctaaca 19363429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19801265 - 19801201
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||||| | | |  || ||||| ||  ||||||||||||||||||    
T  19801265 actccccaaattagtttacagatgtgaattaacttgctgtatacactcagaacctatttctaaca 19801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21830335 - 21830399
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||||   ||  || ||||||||||||||||||||||  |||||||    
T  21830335 actccccaaatcagtttacagatgctaaactaagtgttgtatgcaaccagaacctaactctaaca 21830399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22312175 - 22312111
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||| |||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  22312175 actcccgaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 22312111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 22744532 - 22744779
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  22744532 actccccaaatcagtttacagatgtgtaattaaatgttgtatgcaaccagaacctatttctaacatcaaaacaa-ggtttctaccctcaatccacccaaa 22744630  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    || ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||    
T  22744631 aaccaaagaaccaaaacctaacccaattttccaattttcatacagaactatgttaaaccaaaatcaaaatttcattctacattattgaaagtaaacatca 22744730  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22744731 cccttaccttaattcagat-gaaaaatctctacagaatctggttctcttg 22744779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 20007064 - 20007280
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| |||| |    | ||||| |||||| || |||||    
T  20007064 actccccaaattagtttacagatatgtatttaaatgttgtatgcaaccagaacctatttctaacaccaaaatagcaatatctacactcaattca-ccaaa 20007162  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcat-tctacattattgaaagtaaacctc 199  Q
    || |||  |  ||||||||||| |||||||||||||||||| |||||   |||||||||||||||||||||  || |||| | || || ||| |||||||    
T  20007163 aaccaagaattcaaaacctaacccaaattcccaattttcatccagaaacctgttaaaccaaaattagaattcaatatctatactactg-aagcaaacctc 20007261  T
Q  200 acccttaccttaattcaga 218  Q
    |||||||||||||||||||    
T  20007262 acccttaccttaattcaga 20007280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 14594099 - 14593885
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||  | ||| |  || ||||||||  ||||||||||||||||||  |||| |    | ||||| |||||| ||| ||||    
T  14594099 actccccaaatcagtttacagatacgaaataacttgctgtatgcactcagaacctatttctaacatcaaaaaagcaatctctacactcaattcactcaaa 14594000  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaa-aattagaatttcattctacattattgaaagtaaacctc 199  Q
    || |||| || | ||    ||| ||| ||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||    
T  14593999 aaccaaataatccaacataaacccaatttcccaattttcatacagaacaatgttaaaccaagaatcagaatttcattctacattattgaaagtaaacttc 14593900  T
Q  200 acccttaccttaatt 214  Q
    |||||||||||||||    
T  14593899 acccttaccttaatt 14593885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 33089706 - 33089953
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| | ||| ||| | ||||| ||||  ||||||||||||||||||| | ||||||| |||  |||| ||||     
T  33089706 actccccaaaacagtttacagaagtgtaataagatgctgtctacaacctgaacacatttctaacactaaaacaatgatttctacactctttccatccaac 33089805  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    | |||||||| |||| |   || ||||||||||||||||   |||||  |||||||| ||||||| ||||||  | ||||||| ||||||||||||||||    
T  33089806 a-tcaaagaatcaaatctagacccaaattcccaattttctaccagaaacatgttaaatccaaaatcagaattataatctacat-attgaaagtaaacctc 33089903  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||||||| |||||| ||| |||||||||| | |||||||||||||    
T  33089904 acccttaccttaaatcagat-gaacaatctctacaaattctggttctcttg 33089953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 20005059 - 20004811
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||  || |||||||||||||||| ||||||| | || |||| |||||| ||||||||    
T  20005059 actccccaaatcagtttacagatatgaaatgaaatgctgtatgcactcataacctatttctaacaccaaaacaatgattcctacactcaattcacccaaa 20004960  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatt-tcattctacattattgaaagtaaacctc 199  Q
    || ||||||| |||| |  ||| |||| |||| | ||||   || ||   |||||||||||||| ||||||   | |||||| || || |||||||||||    
T  20004959 aaccaaagaatcaaacctaaactcaaaatccccaatttctaccataaacctgttaaaccaaaatcagaattaaaaatctacactactg-aagtaaacctc 20004861  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||||||| |||||| ||| ||| |||||  | |||||||||||||    
T  20004860 acccttaccttaaatcagat-gaacaatttctacgaattctggttctcttg 20004811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 20011464 - 20011216
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  ||||||||||  ||||||  | |||||| | ||||| |||| |||| ||||||||||    | || |||||| |||  || | |||||    
T  20011464 actccccaaaacagtttacagaaatgtaatagagtgttgtctacaacctgaacatattcctaacactaatgtcatggattctacactctttcaatccaaa 20011365  T
Q  101 aatcaaagaaccaaaacc-taacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    || ||||||| ||||||| |||| ||||||||||||||  |  |||||||| ||||||||||||| ||||||  | |||| | |||||| ||||||||||    
T  20011364 aagcaaagaatcaaaaccctaacccaaattcccaatttctac-cagaactaagttaaaccaaaatcagaattataatctatactattgagagtaaacctc 20011266  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaa-tctggttctctt 249  Q
    |||||||||||||||||||  ||| || |||||||||| ||||||||||||    
T  20011265 acccttaccttaattcaga-cgaacaaactctacagaattctggttctctt 20011216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 20773417 - 20773296
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||  ||||||||||||||||||  ||||| | |||| ||||||||||| ||||| ||    
T  20773417 actccccaaatcagtttacagatgtgaaatgaaatattgtatgcactcagaacctatttctaacatcaaaac-agggttcctaccctcaattcaccc-aa 20773320  T
Q  101 aatcaaagaa--ccaaaacctaac 122  Q
    ||||||||||  ||||||||||||    
T  20773319 aatcaaagaaatccaaaacctaac 20773296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 20783211 - 20783090
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||  ||||||||||||||||||  ||||| | |||| ||||||||||| ||||| ||    
T  20783211 actccccaaatcagtttacagatgtgaaatgaaatattgtatgcactcagaacctatttctaacatcaaaac-agggttcctaccctcaattcaccc-aa 20783114  T
Q  101 aatcaaagaa--ccaaaacctaac 122  Q
    ||||||||||  ||||||||||||    
T  20783113 aatcaaagaaatccaaaacctaac 20783090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 25624011 - 25623793
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    |||| |||||| |||||||||||||||||  ||||||||||||||  | | || || ||||||||| ||| ||||||||||||| |||  | |||  |||    
T  25624011 actcgccaaataagtttacagatgtgtaactaaatgttgtatgcagtctggacataattctaacaccaaa-caaaggtttctacactcttttccattcaa 25623913  T
Q  100 aaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    ||  ||| ||| || |||||| || ||||||||||||||| |  || ||  ||||||||||||||| |||||| || |||| | ||||||||||||||||    
T  25623912 aac-caaggaatcataacctagacccaaattcccaatttttaaccaaaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacct 25623814  T
Q  199 cacccttaccttaattcagat 219  Q
    ||||||||||||| |||||||    
T  25623813 cacccttaccttagttcagat 25623793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 21299474 - 21299313
Alignment:
Q  50 gaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaac 148  Q
    |||| |||||||||||||||||||| |||| |||| |||| |||  ||| || || ||||| ||||||||| || ||||||||||||||  |  ||||||    
T  21299474 gaacatatttctaacactaaaacaatggttcctacactcattccgtccagaattcgaagaatcaaaacctagacccaaattcccaatttctac-cagaac 21299376  T
Q  149 tatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    || ||||||||||||| ||||||  | || | | |||||||||||||||||||||||||||||    
T  21299375 taggttaaaccaaaatcagaattataatccatactattgaaagtaaacctcacccttacctta 21299313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21685430 - 21685368
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaa 63  Q
    ||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  21685430 actccccaaatcagtttacagatatgaaattaaatgttgtatgcaaccagaacctatttctaa 21685368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21689779 - 21689717
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaa 63  Q
    ||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  21689779 actccccaaatcagtttacagatatgaaattaaatgttgtatgcaaccagaacctatttctaa 21689717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41008818 - 41008754
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||||||||||    
T  41008818 actccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaaca 41008754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11391944 - 11391880
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   ||||||| |||| ||||||||||||||||| ||||||||    
T  11391944 actccccaaattagtttacagatacctaatgaagtgttatatgcaaccagaacctaattctaaca 11391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 3698665 - 3698727
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaa 212  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||||||||||||||||||||    
T  3698665 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaa 3698727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 211
Target Start/End: Original strand, 10607759 - 10607914
Alignment:
Q  58 ttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaa--cgcaaattcccaattttcatacagaactatgtta 155  Q
    ||||||||||||||||| |||| |||| |||| |||| ||| || || ||||| |||||||||   | |||||||| |||||  |  |||||||| ||||    
T  10607759 ttctaacactaaaacaatggttcctacactcattccatccagaattcgaagaatcaaaacctagaccccaaattccgaatttctac-cagaactaggtta 10607857  T
Q  156 aac-caaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    ||| |||||| ||||||  | || | | |||||||||||||||||||||||||||||    
T  10607858 aactcaaaatcagaattataatccatactattgaaagtaaacctcacccttacctta 10607914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18680870 - 18680809
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  18680870 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 18680809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 23826202 - 23826270
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  23826202 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 23826270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9272524 - 9272461
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    |||||||||||||||||||||||||  ||||||| ||| ||||||  ||||||| |||||||||    
T  9272524 actccccaaattagtttacagatgtacaatgaaaggttttatgcactcagaacccatttctaac 9272461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19987541 - 19987480
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaa 63  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||| ||||    
T  19987541 actccccaaatcagtttacagatatg-aatgaaatgttgtatgcactcagaacctattcctaa 19987480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 19989908 - 19989961
Alignment:
Q  159 caaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaa 212  Q
    ||||||||||| |||| |||| |  |||||||||||||||||||||||||||||    
T  19989908 caaaattagaaattcaatctataccattgaaagtaaacctcacccttaccttaa 19989961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22056552 - 22056613
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||    
T  22056552 actccccaaattagtttacagatatgcaatgaaaggttatatgcactcagaacccatttcta 22056613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31567178 - 31567117
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||||| |||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  31567178 actccccaaattagcttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 31567117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31572399 - 31572338
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||||| |||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  31572399 actccccaaattagcttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 31572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 44432923 - 44432984
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| |||||||||||||||    
T  44432923 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaaactcacccttacctta 44432984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 12303988 - 12304048
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||   |||| || |||| ||||||||||||||||| ||||||||    
T  12303988 cccaaattagtttacagatacataattaagtgttttatgcaaccagaacctaattctaaca 12304048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20258347 - 20258283
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  | |||||||||  ||||||||||||||||||    
T  20258347 actccccaaattggtttacagatgtgaaataacgtattgtatgcactcagaacctatttctaaca 20258283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21044977 - 21044913
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  | |||||||||  ||||||||||||||||||    
T  21044977 actccccaaattggtttacagatgtgaaataacgtattgtatgcactcagaacctatttctaaca 21044913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1803855 - 1803792
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||  || ||||||| ||| ||||||  ||||||| |||||||||    
T  1803855 actccccaaattagtttacagaaatgcaatgaaaggttttatgcactcagaacccatttctaac 1803792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 16266042 - 16266001
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  16266042 tctacactattgaa-gtaaacctcacccttaccttaattcaga 16266001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 21685242 - 21685212
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||    
T  21685242 aagtaaacctcacccttaccttaattcagat 21685212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 21689591 - 21689561
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||    
T  21689591 aagtaaacctcacccttaccttaattcagat 21689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 35541967 - 35542005
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  35541967 aagtaaacctcacccttaccttaattcagaatgaaaaat 35542005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 27364268 - 27364305
Alignment:
Q  190 agtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||||||||||||||||||  |||||||    
T  27364268 agtaaacctcacccttaccttaattcagaatgaaaaat 27364305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1264859 - 1264923
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | ||| |  | |||||||||  ||||||||||||||||||    
T  1264859 actccccaaattagtttacagataagcaataaggtattgtatgcactcagaacctatttctaaca 1264923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 3223856 - 3223817
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaattca 216  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  3223856 tctacactattgaa-gtaaacctcacccttaccttaattca 3223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 9204526 - 9204483
Alignment:
Q  174 attctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||    
T  9204526 attctacactattgaa-gtaaaccccacccttaccttaattcaga 9204483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14745857 - 14745793
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||||||   || ||||||||||||||| | ||||||||    
T  14745857 actccccaaattagtttacagatgaaaaatgaatgtttctatgcaaccagaacccaattctaaca 14745793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16266207 - 16266143
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||||||   || ||||||||||||||| | ||||||||    
T  16266207 actccccaaattagtttacagatgaaaaatgaatgtttctatgcaaccagaacccaattctaaca 16266143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21683037 - 21682974
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||| |||||| || ||  || || ||||| ||||||||||||||||||||||    
T  21683037 actccccaaattagtt-acagatatgaaactaagtgctgtatacaaccagaacctatttctaaca 21682974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22062928 - 22062884
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgca 45  Q
    ||||||||||| ||||||||||| || ||||||| ||||||||||    
T  22062928 actccccaaatcagtttacagatatgcaatgaaaggttgtatgca 22062884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36445110 - 36445066
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgca 45  Q
    |||||||||||||||||||||||||| ||| |  |||||||||||    
T  36445110 actccccaaattagtttacagatgtgaaataacttgttgtatgca 36445066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 37240370 - 37240434
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||| | ||||||||    
T  37240370 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaaca 37240434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 13439 - 13685
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13439 actccccaaataagtttacagatgtgtaatgaaatgctgtatgcaaccagaacctatttctaacactaaaacaa-ggtttctaccctcaatccacccaaa 13537  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| |||||| |||||||||||  || ||||||||||| |||| |  ||||||||||||||||||||||||||||||||||    
T  13538 aatcaaagaaccaaaacctaacccaaatttccaattttcatcaaggactatgttaaatcaaattaggaatttcattctacattattgaaagtaaacctca 13637  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||||||||| |||||||| |||||||||||||||||| || ||||||||    
T  13638 cccttacctt-attcagat-gaaaaatctctacagaatgtgattctcttg 13685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 46085 - 45871
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  46085 actccccaaatcagtttacagatgtgtaattaagtgttgtatgcaaccagaacctatttctaacatcaaaacaa-ggtttctaccctcaatccacccaaa 45987  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |    
T  45986 aatcaaagaaccaaaacctaacccaaattcccaattttcatacagaacaatgttaaaccaaaatcagaatttcattttacattattgaaagtaaacctta 45887  T
Q  201 cccttaccttaattca 216  Q
    ||||||||||||||||    
T  45886 cccttaccttaattca 45871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 72256 - 72039
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  72256 actccccaaatcagtttacagatgtgtaattaagtgttgtatgcaaccagaacctatttctaacatcaaaacaa-ggtttctaccctcaatccacccaaa 72158  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||| | ||||||||| |||||||||||||||||||||||    
T  72157 aatcaaagaaccaaaacctaacccaaattcccaatttttatacagaacaatgttaaaccagaatcataatttcattttacattattgaaagtaaacctca 72058  T
Q  201 cccttaccttaattcagat 219  Q
    |||||||||||||||||||    
T  72057 cccttaccttaattcagat 72039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 5e-90; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 23106021 - 23106250
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  23106021 actccccaaatcagtttacagatatgaattgaaatgttgtatgcaaccaaaacctaattctaacactaaaacaa-ggtttctaccctcaatccacccaaa 23106119  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23106120 aatcaaagaaccaaaacctaacccaaattcccaattttcatacagaacaacgttaaaccaaaatcagaatttcattctacattattgaaagtaaacctca 23106219  T
Q  201 cccttaccttaattcagatagaaaaatctcta 232  Q
    |||||||||||| |||||| ||| ||||||||    
T  23106220 cccttaccttaaatcagat-gaacaatctcta 23106250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 17414824 - 17414959
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||| ||||||||  ||||||||  ||||||||||||||||||  ||||| | |||| ||||||||||| || || ||    
T  17414824 actccccaaatcagtttacagatgtgaaatgaaatactgtatgcactcagaacctatttctaacatcaaaac-agggttcctaccctcaattcatcc-aa 17414921  T
Q  101 aatcaaagaa--ccaaaacctaacgcaaattcccaattt 137  Q
    ||||||||||  |||||||||||| | ||||||||||||    
T  17414922 aatcaaagaaatccaaaacctaactc-aattcccaattt 17414959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 18786901 - 18787022
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||| ||| ||||  ||||||||   |||||||||||||||||| ||||| | |||| ||||||||||| ||||| ||    
T  18786901 actccccaaatcagtttacagatgtgaaataaaatactgtatgcacttagaacctatttctaacaccaaaac-agggttcctaccctcaattcaccc-aa 18786998  T
Q  101 aatcaaagaa--ccaaaacctaac 122  Q
    ||||||||||  ||||||||||||    
T  18786999 aatcaaagaaatccaaaacctaac 18787022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 14725226 - 14725387
Alignment:
Q  50 gaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaac 148  Q
    |||| |||||||||| ||||||||| |||| |||| |||| |||  ||| || || ||||| ||||||||| || ||||||| ||||||  |  ||||||    
T  14725226 gaacatatttctaaccctaaaacaatggttcctacactcattccgtccataattcgaagaatcaaaacctagacccaaattcacaatttctac-cagaac 14725324  T
Q  149 tatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    || ||||||||||||| ||||||  | || | | |||||||||||||||||||||||||||||    
T  14725325 taggttaaaccaaaatcagaattaaaatccatactattgaaagtaaacctcacccttacctta 14725387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 7430584 - 7430653
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||| |||||| || ||| || |||| | |||||||||||||||||||||||||||||||||||||    
T  7430584 atgttaaatcaaaatcaggattacaatctatactattgaaagtaaacctcacccttaccttaattcagat 7430653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 8759508 - 8759447
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| ||||||||| |||| | |||||||||||||||||||||||||||||    
T  8759508 atgttaaatcaaaatcagaatttcaatctatactattgaaagtaaacctcacccttacctta 8759447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13127641 - 13127568
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||||||||  | |||||| |||| ||||||||||||||||| ||||||||  |||||||    
T  13127641 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccagaacctaattctaacatcaaaacaa 13127568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14132388 - 14132324
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || |||| |||||||||| ||  ||||||||||||||||||    
T  14132388 actccccaaattagtttacagatatgaaatggaatgttgtatacactcagaacctatttctaaca 14132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 14995286 - 14995238
Alignment:
Q  166 agaatttcattctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  14995286 agaatttcaatctacactattgaaagtaaacctcacccttaccttaatt 14995238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22797868 - 22797804
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||||  ||  ||||| ||||||||||||||||||||||||||||    
T  22797868 actccccaaatcagtttacagatgtaaaactaaatgctgtatgcaaccagaacctatttctaaca 22797804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 21470670 - 21470749
Alignment:
Q  58 ttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaacgcaaattcccaattt 137  Q
    |||||||||||| |||| | ||||||| |||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||    
T  21470670 ttctaacactaatacaatgatttctacactctttccatccaaaaatcaaagaatcaaaatctaacccaaattcccaattt 21470749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 21477171 - 21477249
Alignment:
Q  59 tctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaacgcaaattcccaattt 137  Q
    ||||||||||| |||| | ||||||| |||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||    
T  21477171 tctaacactaatacaatgatttctacactctttccatccaaaaatcaaagaatcaaaatctaacccaaattcccaattt 21477249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10470093 - 10470020
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||||||||  | |||||| |||| ||||||||||||||| | ||||||||  |||||||    
T  10470093 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccagaacccaattctaacatcaaaacaa 10470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13200807 - 13200868
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  13200807 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 13200868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14033976 - 14034037
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  14033976 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 14034037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 14593693 - 14593632
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | |||||||||||||||||||||||||||||    
T  14593693 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 14593632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 18315323 - 18315266
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||| ||||||||||||| |||  ||||||||||||||| |||||||||||||||    
T  18315323 cccaaatcagtttacagatgtataactaaatgttgtatgcaatcagaacctatttcta 18315266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8069052 - 8068988
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   |||| || |||| ||||||||||||||||| ||||||||    
T  8069052 actccccaaattagtttacagatacataattaagtgttttatgcaaccagaacctaattctaaca 8068988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14615632 - 14615568
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||| || |||| ||||||||||||||||| ||||||||    
T  14615632 actccccaaattagtttacagatgctaaattaagtgttatatgcaaccagaacctaattctaaca 14615568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 8767259 - 8767208
Alignment:
Q  160 aaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    ||||| ||||||||| |||| | |||||||||||||||||||||||||||||    
T  8767259 aaaatcagaatttcaatctatactattgaaagtaaacctcacccttacctta 8767208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13941222 - 13941285
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    |||||||||||||||||||||||  | ||| || |||| ||||||||||||||||| |||||||    
T  13941222 actccccaaattagtttacagataagcaataaagtgttctatgcaaccagaacctaattctaac 13941285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27561880 - 27561817
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  27561880 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 27561817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28289547 - 28289484
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| |||| | |||||||| |||||||||    
T  28289547 actccccaaattagtttacagatatgaaatgaaaggttttatgtacccagaacccatttctaac 28289484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 29266344 - 29266402
Alignment:
Q  159 caaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||| || |||| | |||||| |||||||||||||||||||||||||||||    
T  29266344 caaaattagaatt-caatctatactattgagagtaaacctcacccttaccttaattcaga 29266402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33681596 - 33681533
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| | |||||||    
T  33681596 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccacttctaac 33681533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 19587902 - 19587860
Alignment:
Q  32 aaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  19587902 aaatgttgtatgcaaccagaacctatttctaacatcaaaacaa 19587860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 22347485 - 22347542
Alignment:
Q  160 aaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||||||| || |||| | |||||| |||||||||||||||||||||||||||||    
T  22347485 aaaattagaatt-caatctatactattgagagtaaacctcacccttaccttaattcaga 22347542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 27768153 - 27768211
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaa 63  Q
    |||||||||||||||||||   ||||||| |||| ||||||||||||||||| ||||||    
T  27768153 cccaaattagtttacagatacataatgaagtgttctatgcaaccagaacctaattctaa 27768211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14374720 - 14374647
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||| |||||| |||| || ||  ||||| ||||||||||||||||||||||| ||||  |||||||    
T  14374720 actccccaaatcagtttaaagatatgaaactaaatgctgtatgcaaccagaacctatttccaacatcaaaacaa 14374647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19468652 - 19468717
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacac 66  Q
    |||||||||||| ||||||||||||| ||| |  || ||||||||  |||||||||||||||||||    
T  19468652 actccccaaattggtttacagatgtgaaataacttgctgtatgcactcagaacctatttctaacac 19468717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23835889 - 23835950
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||||| |||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  23835889 actccccaaattagcttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 23835950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 25773466 - 25773527
Alignment:
Q  76 ggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaacgcaaattcccaattt 137  Q
    ||||||||| |||  |||| ||||||||||||||| ||||| ||||| ||||||||||||||    
T  25773466 ggtttctacactctttccaaccaaaaatcaaagaatcaaaatctaacccaaattcccaattt 25773527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28359197 - 28359136
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||| ||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  28359197 actccccaatttagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 28359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1593563 - 1593627
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  1593563 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 1593627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19727440 - 19727504
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  19727440 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 19727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21724100 - 21724036
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  21724100 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 21724036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 22888946 - 22888870
Alignment:
Q  58 ttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacctaacgcaaattcccaa 134  Q
    |||||||||||| |||  ||||||||| |||| |||| ||||||||||||||| ||||| ||||  | |||||||||    
T  22888946 ttctaacactaatacagtggtttctacactcattccatccaaaaatcaaagaatcaaaatctaaacccaattcccaa 22888870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23232763 - 23232699
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  23232763 actccccaaatcagtttacagatgataaactaagtgttgtatgcaaccagaacctaattctaaca 23232699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24721427 - 24721491
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || |||||||||||||||||||||| || |||||    
T  24721427 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattataaca 24721491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 10469917 - 10469879
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  10469917 aagtaaacctcacccttaccttaattcagaatgaaaaat 10469879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 13127465 - 13127427
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  13127465 aagtaaacctcacccttaccttaattcagaatgaaaaat 13127427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 18315134 - 18315077
Alignment:
Q  193 aaacctcacccttaccttaattcagatagaaaaatctct-acagaatctggttctcttg 250  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||| ||||    
T  18315134 aaacctcacccttaccttaattcagat-gaacaatctctaacaaaatctggttcacttg 18315077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 18787089 - 18787127
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  18787089 aagtaaacctcacccttaccttaattcagaaggaaaaat 18787127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 22797680 - 22797650
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||    
T  22797680 aagtaaacctcacccttaccttaattcagat 22797650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 19468844 - 19468877
Alignment:
Q  193 aaacctcacccttaccttaattcagatagaaaaa 226  Q
    |||||||||||||||||||||||||| |||||||    
T  19468844 aaacctcacccttaccttaattcagaaagaaaaa 19468877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 24721566 - 24721642
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||| ||||||  ||  ||||| ||||||| | ||||||||||||||||||||||||||  |||||||    
T  24721566 tgttaaaccaaaatcagaattcaataactacactattgaa-gcaaacctcacccttaccttaattcagaaggaaaaat 24721642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2709185 - 2709249
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||| |||   ||  || |||||||||||||||||||||| ||||||||    
T  2709185 actccccaaatcagtttacatatgctaaactaagtgttgtatgcaaccagaacctaattctaaca 2709249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19819703 - 19819767
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||| || ||||||||||||||||| |  || | ||||||  ||||||||||||||||||    
T  19819703 actccccaatttggtttacagatgtgtaataacttgctatatgcactcagaacctatttctaaca 19819767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 8e-89; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 41315061 - 41315307
Alignment:
Q  2 ctccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaa 101  Q
    |||||||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  41315061 ctccccaaatcagtttacagatatgaaatgaaatgctgtatgcaaccagaacctatttctaacatcaaaacaa-ggtttctaccctcaatccacccaaaa 41315159  T
Q  102 atcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcac 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||| |||||    
T  41315160 atcaaagaaccaaaacctaacccaaattcccaattttcatacagaacaatgttaaaccaaaatcaaaaattcattctacattattgaaagtaaatctcac 41315259  T
Q  202 ccttaccttaattcagatagaaaaatctctac-agaatctggttctcttg 250  Q
    |||||||||||||||||| ||| ||| ||||| |||||||||||||||||    
T  41315260 ccttaccttaattcagat-gaacaat-tctacaagaatctggttctcttg 41315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21986249 - 21986000
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||| ||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||| | ||||||| |||||| |||||||     
T  21986249 actccccaaaacagttcacagatgtgcaatgaaatgctgtacgcaaccagaacatatttctaacactaaaacaatgatttctacactcaattcacccaag 21986150  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    ||||||| || || || ||||| ||||||||||||||| |  |||||||||||||||||||||| ||||||  | |||||| ||||||||||||||||||    
T  21986149 aatcaaataatcataatctaacccaaattcccaatttt-aaccagaactatgttaaaccaaaatcagaattataatctacactattgaaagtaaacctca 21986051  T
Q  201 cccttaccttaattcagatagaaaaatctct--acagaatctggttctcttg 250  Q
    ||||||||||||||||||| ||| |||||||  ||| |||||||||||||||    
T  21986050 cccttaccttaattcagat-gaacaatctctacacaaaatctggttctcttg 21986000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21733768 - 21733551
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| | || |||| || ||| ||||||||    
T  21733768 actccccaaatcagtttacagatgtgcaatgaaatgttgtatgcaaccagaacctatttctaacattaaaacaatgattcctacactaaattcacccaaa 21733669  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||| ||||| ||||| ||||||||||| ||||   || ||  ||||||||||||||| |||||| || |||||| ||||||| | ||||||||    
T  21733668 aatcaaagaatcaaaatctaacccaaattcccaa-tttctaccataaacatgttaaaccaaaatcagaattacaatctacactattgaaggcaaacctca 21733570  T
Q  201 cccttaccttaattcagat 219  Q
     ||||||||||| ||||||    
T  21733569 gccttaccttaaatcagat 21733551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21744949 - 21744699
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||| | || |||| |||||| ||||||||    
T  21744949 actccccaaaacagtttacagatgtgcaatgaaatgctgtatgcgaccagaacatatttctaacactaaaacaatgattcctacactcaattcacccaaa 21744850  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| |||| |   || ||||||||||||||||   |||||  |||||||| ||||||| |||||| || |||||| |||||||||||||||||    
T  21744849 aatcaaagaatcaaatctagacccaaattcccaattttctaccagaaacatgttaaatccaaaatcagaattacaatctaca-tattgaaagtaaacctc 21744751  T
Q  200 acccttaccttaattcagatagaaaaatctctaca--gaatctggttctcttg 250  Q
    |||||||||||||||| ||| ||| ||||||||||   |||||||||||||||    
T  21744750 acccttaccttaattcggat-gaacaatctctacactaaatctggttctcttg 21744699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 5381456 - 5381703
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| |||| |||||||||| | ||||  ||| ||||||||||||||| | ||||||| || ||| ||||||||    
T  5381456 actccccaaaacagtttacagaagtgtaataaaatattgtatgcaatctgaacacattcctaacactaaaacaatgatttctacacttaattcacccaaa 5381555  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| | ||||||| || ||||||||||| |||||  |||||  ||||||||||||||| |||||| || |||| | |||||||||||||||||    
T  5381556 aatcaaagaatc-aaacctagacccaaattcccaa-tttcaaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctc 5381653  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||||||||||||||||||| ||| ||  |||||| |||||||||||||||    
T  5381654 acccttaccttaattcagat-gaacaagttctacaaaatctggttctcttg 5381703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21410025 - 21409952
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||||  |||||||    
T  21410025 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcaaccagaacctaattctaacatcaaaacaa 21409952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 2332124 - 2332055
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||| |||||| |||||| || |||| | |||||||||||||||||||||||||||||||||||||    
T  2332124 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaattcagat 2332055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30490795 - 30490686
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  |||||| |||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  30490795 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaacttatttctaacatcaaaccagtgattcctacactcaattcacccaaa 30490696  T
Q  101 aatcaaagaa 110  Q
    || |||||||    
T  30490695 aaccaaagaa 30490686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21698924 - 21698996
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    ||||||||||| |||||| ||||||  ||  ||||| |||||||||||||||||||||||||||| |||||||    
T  21698924 actccccaaatcagtttaaagatgtaaaactaaatgctgtatgcaaccagaacctatttctaacattaaaaca 21698996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4231980 - 4232044
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   |||| || |||| ||||||||||||||||| ||||||||    
T  4231980 actccccaaattagtttacagatacataattaagtgttttatgcaaccagaacctaattctaaca 4232044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11140455 - 11140391
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  11140455 actccccaaattagtttacagatgctaaactaagtgttgtatgcaaccagaacctaattctaaca 11140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19859984 - 19860048
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  19859984 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 19860048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 21543118 - 21543186
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  21543118 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 21543186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21921586 - 21921650
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  |||||||| |||| ||| || |||||||||| ||||||||    
T  21921586 actccccaaattagtttacagataggtaatgaagtgttctatacatccagaacctaattctaaca 21921650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 42095005 - 42094937
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  42095005 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 42094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27281027 - 27281090
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  27281027 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 27281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 31926660 - 31926562
Alignment:
Q  4 ccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaa 102  Q
    |||||||| ||||||||||| || ||||||||  ||||||||  ||||||||||||||||||  ||||||    ||||||| |||||| ||| ||||||    
T  31926660 ccccaaatcagtttacagatatgaaatgaaatcctgtatgcactcagaacctatttctaacatcaaaacagtaatttctacactcaattcactcaaaaa 31926562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22434304 - 22434239
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacac 66  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||||    
T  22434304 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaacac 22434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23066026 - 23065965
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||| ||||||||||||| |||||| |  ||||||||  |||||||||||||||    
T  23066026 actccccaaattggtttacagatgtgaaatgaattactgtatgcactcagaacctatttcta 23065965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47484898 - 47484962
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaa-atgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||||  |||||  |||||||||||  ||||||||||||||||||    
T  47484898 actccccaaattagtttacagatgtg-catgaacttgttgtatgcactcagaacctatttctaaca 47484962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15315853 - 15315789
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||  ||  || || ||||||||||||||||||| ||||||||    
T  15315853 actccccaaattggtttacagatgtaaaactaagtgatgtatgcaaccagaacctaattctaaca 15315789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20243371 - 20243435
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| |||||| |||  ||||||| ||||||||||    
T  20243371 actccccaaatcagtttacagatatgcaatgaaaggttgtacgcactcagaacccatttctaaca 20243435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20595461 - 20595397
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  20595461 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 20595397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21735953 - 21736017
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| |||||||||| |||||| |  || ||||||||  ||||||||||||||||||    
T  21735953 actccccaaattggtttacagatatgtaataacttgctgtatgcactcagaacctatttctaaca 21736017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23713022 - 23713086
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||||  ||  ||||| ||||||||| || ||| |||||||||||    
T  23713022 actccccaaattagtttacagatgtaaaactaaatgctgtatgcaatcaaaacttatttctaaca 23713086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29553797 - 29553733
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||| |||   ||| || |||| ||||||||||||||||| ||||||||    
T  29553797 actccccaaattagtttacatatgctaaattaagtgttatatgcaaccagaacctaattctaaca 29553733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29601615 - 29601551
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  |||||||| |||| ||| || |||| ||||| ||||||||    
T  29601615 actccccaaattagtttacagataggtaatgaagtgttctatacatccagcacctaattctaaca 29601551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 19045461 - 19045411
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||| ||||||| ||||||||||||||||||||||||||||  |||||||    
T  19045461 tctacactattgaa-gtaaacctcacccttaccttaattcagaatgaaaaat 19045411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 19336599 - 19336694
Alignment:
Q  7 caaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaa 102  Q
    ||||| ||||||||||| ||  ||| |||||||||||||  ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||||    
T  19336599 caaatcagtttacagatatgagatggaatgttgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaa 19336694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 24960886 - 24960921
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||| |||||||||||||||||||||||||||||    
T  24960886 tattgagagtaaacctcacccttaccttaattcaga 24960921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 18419095 - 18419133
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  18419095 aagtaaacctcacccttaccttaattcagaatgaaaaat 18419133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 20396064 - 20396026
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  20396064 aagtaaacctcacccttaccttaattcagaatgaaaaat 20396026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 48428821 - 48428859
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  48428821 aagtaaacctcacccttaccttaattcagaatgaaaaat 48428859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 36918087 - 36918116
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  36918087 aagtaaacctcacccttaccttaattcaga 36918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 954438 - 954374
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||| ||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  954438 actccccaaatcagttttcagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 954374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3706114 - 3706050
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  || |||| ||||||||||    
T  3706114 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcataacccatttctaaca 3706050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16882901 - 16882837
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||  ||| |  |||||||||||  || |||||||||||||||    
T  16882901 actccccaaattggtttacagatgttaaataacttgttgtatgcactcataacctatttctaaca 16882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18026077 - 18026013
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||| ||| ||||||||    
T  18026077 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaaca 18026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 217
Target Start/End: Original strand, 21963975 - 21964003
Alignment:
Q  189 aagtaaacctcacccttaccttaattcag 217  Q
    |||||||||||||||||||||||||||||    
T  21963975 aagtaaacctcacccttaccttaattcag 21964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24237756 - 24237692
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||  || |||||| | ||||||||||||| ||||||||    
T  24237756 actccccaaatcagtttacagatatgaaactaagtgttgtctacaaccagaacctaattctaaca 24237692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49328823 - 49328887
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||| |||||||    |||||| |||| ||||||||||||||||| ||||||||    
T  49328823 actccccaaatcagtgtacagataaacaatgaagtgttctatgcaaccagaacctaattctaaca 49328887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 5e-87; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 12695418 - 12695635
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| | |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  12695418 actccccaaatcagtttacagatatttaattaactgttgtatgcaaccagaacctatttctaacactaaaacaa-ggtttctaccctcaatccatccaaa 12695516  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12695517 aatcaaagaaccaaaacctaacccaaattcccaattttgatacagaacaacgttaaaccaaaatcagaatttcattctacattattgaaagtaaacctca 12695616  T
Q  201 cccttaccttaattcagat 219  Q
    |||||||||||| ||||||    
T  12695617 cccttaccttaaatcagat 12695635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 14249881 - 14249633
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  |||||||| | ||||||| | ||||||||||||| | ||||  ||| ||||||||||||||| |||||| || |||  | ||| ||||    
T  14249881 actccccaaaacagtttacataagtgtaataacatgttgtatgcaatctgaacacattcctaacactaaaacaatggtttcaacactcttttccatccaa 14249782  T
Q  100 aaatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    || |||||||| || || |||| | ||||||||||||||| |  |||||||||||||||||||||| ||||||  | |||||| ||||||||||||||||    
T  14249781 aa-tcaaagaatcataatctaaacccaaattcccaattttaac-cagaactatgttaaaccaaaatcagaattataatctacactattgaaagtaaacct 14249684  T
Q  199 cacccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||||||||||||| |||||| ||| |||||||||| | |||||||||||||    
T  14249683 cacccttaccttaaatcagat-gaacaatctctacaaattctggttctcttg 14249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 14265351 - 14265103
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  |||||||||| ||||||| | ||| ||||||||| | ||||  ||| ||||||||||||||| |||||| || |||  | ||| ||||    
T  14265351 actccccaaaacagtttacagaagtgtaataacatgctgtatgcaatctgaacacattcctaacactaaaacaatggtttcaacactcttttccatccaa 14265252  T
Q  100 aaatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    || |||||||| || || |||| | ||||||||||||||| |  |||||||||||||||| ||||| ||||||  | |||||| ||||||||||||||||    
T  14265251 aa-tcaaagaatcataatctaaacccaaattcccaattttaac-cagaactatgttaaactaaaatcagaattataatctacactattgaaagtaaacct 14265154  T
Q  199 cacccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||||||||||||| |||||| ||| |||||||||| | |||||||||||||    
T  14265153 cacccttaccttaaatcagat-gaacaatctctacaaattctggttctcttg 14265103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 23443030 - 23443220
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaacc 112  Q
    |||||||||| ||| ||||||||  |||||||||||||||| |||||||||||||||||||| | || |||| ||||||||||||||||||||||||| |    
T  23443030 agtttacagaagtgcaatgaaatactgtatgcaaccagaacatatttctaacactaaaacaatgattcctacactcaatccacccaaaaatcaaagaatc 23443129  T
Q  113 aaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcaccct 204  Q
    ||| |  ||| |||||||||||  |||   |||||  ||||||||||||||| |||||| || |||| | |||||||| |||||||||||||    
T  23443130 aaacctaaactcaaattcccaa-cttctaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaattaaacctcaccct 23443220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 20752073 - 20752291
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaa 99  Q
    ||||||||||  |||| ||||| ||||||||| ||||||| |  |||| ||||  ||||||||||||||||||| ||||||||| |||   |||| || |    
T  20752073 actccccaaaacagttcacagaagtgtaatgagatgttgtctataacctgaacacatttctaacactaaaacaatggtttctacactcttttccatcc-a 20752171  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||||||||||| || || ||||| |||||||| || ||| |  ||||||||||| |||||||||| |||||| || | |||| ||||||||| |||||||    
T  20752172 aaatcaaagaatcataaactaacccaaattcctaaattttaaccagaactatgtcaaaccaaaatcagaattacaatatacactattgaaagcaaacctc 20752271  T
Q  200 acccttaccttaattcagat 219  Q
    ||||||||| ||||||||||    
T  20752272 acccttaccataattcagat 20752291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19152674 - 19152892
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaa 99  Q
    ||||||||||  |||| ||||| ||||||||| ||| ||| |  |||| ||||  ||||||||||||||||||| ||||||||| |||   |||| || |    
T  19152674 actccccaaaacagttcacagaagtgtaatgagatgatgtctataacctgaacacatttctaacactaaaacaatggtttctacactcttttccatcc-a 19152772  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||||||||||| || || ||||| ||||||| ||| ||| |  ||||||||||| |||||||||| |||||| || | |||| ||||||||| |||||||    
T  19152773 aaatcaaagaatcataaactaacccaaattctcaaattttaaccagaactatgtcaaaccaaaatcagaattacaatatacactattgaaagcaaacctc 19152872  T
Q  200 acccttaccttaattcagat 219  Q
    ||||||||| ||||||||||    
T  19152873 acccttaccataattcagat 19152892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 19146353 - 19146571
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaa 99  Q
    ||||||||||  |||| ||||| ||||||||| ||| ||| |  |||| ||||  ||||||||||||||||||| ||  ||||| |||   |||| || |    
T  19146353 actccccaaagcagttcacagaagtgtaatgagatgctgtctataacctgaacacatttctaacactaaaacaatggggtctacactcttttccatcc-a 19146451  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||||||||||| || || ||||| ||||||| ||| ||| |  ||||||||||| |||||||||| |||||| || |||||  ||||||||| |||||||    
T  19146452 aaatcaaagaatcataaactaacccaaattctcaaattttaaccagaactatgtcaaaccaaaatcagaattacaatctaccctattgaaagcaaacctc 19146551  T
Q  200 acccttaccttaattcagat 219  Q
    ||||||||||||| ||||||    
T  19146552 acccttaccttaaatcagat 19146571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 20745752 - 20745970
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaa 99  Q
    ||||||||||  |||| ||||| ||||||||| ||| ||| |  |||| ||||  ||||||||||||||||||| ||  ||||| |||   |||| || |    
T  20745752 actccccaaagcagttcacagaagtgtaatgagatgctgtctataacctgaacacatttctaacactaaaacaatggggtctacactcttttccatcc-a 20745850  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||||||||||| || || ||||| ||||||| ||| ||| |  ||||||||||| |||||||||| |||||| || |||||  ||||||||| |||||||    
T  20745851 aaatcaaagaatcataaactaacccaaattctcaaattttaaccagaactatgtcaaaccaaaatcagaattacaatctaccctattgaaagcaaacctc 20745950  T
Q  200 acccttaccttaattcagat 219  Q
    ||||||||||||| ||||||    
T  20745951 acccttaccttaaatcagat 20745970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 15143029 - 15143160
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||| |||| |||  ||||||||||| ||| ||||||||||||||| ||  ||| ||  | || ||||   |||| ||||||||    
T  15143029 actccccaaatcagtttacaaatgtataactaaatgttgtattcaatcagaacctatttctatcatcaaaccagtgattcctacaaccaattcacccaaa 15143128  T
Q  101 aatcaaagaaccaaaacctaacgcaaattccc 132  Q
    |||||||||||||||||||||| |||| ||||    
T  15143129 aatcaaagaaccaaaacctaacccaaaatccc 15143160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 38829122 - 38829191
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||| |||||| |||||| || |||| | |||||||||||||||||||||||||||||||||||||    
T  38829122 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaattcagat 38829191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 45186265 - 45186366
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||||||||||  ||||||    || |||| |||||| ||||||||    
T  45186265 actccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaa 45186364  T
Q  101 aa 102  Q
    ||    
T  45186365 aa 45186366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13318514 - 13318587
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||||| ||||  ||  || |||||||||||||||||||||||||||||||  |||||||    
T  13318514 actccccaaattagtttacaaatgtaaaactaagtgttgtatgcaaccagaacctatttctaacatcaaaacaa 13318587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16073316 - 16073252
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  ||||| ||||||||||||    
T  16073316 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaaactatttctaaca 16073252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19463468 - 19463532
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| ||||||||||||||||| ||||||||    
T  19463468 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccagaacctaattctaaca 19463532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46681539 - 46681475
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| |  ||| || |||||||||||||||||||||||||||||||    
T  46681539 actccccaaatcagtttacagatataaaattaagtgttgtatgcaaccagaacctatttctaaca 46681475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 27565890 - 27565952
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaa 212  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||||||||||||||||||||    
T  27565890 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacctcacccttaccttaa 27565952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 806341 - 806280
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  806341 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 806280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11631283 - 11631222
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  11631283 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 11631222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12462308 - 12462381
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| || |||||| |||| ||| || |||||||||| ||||||||  |||||||    
T  12462308 actccccaaattagtttacagatatgcaatgaagtgttctatacatccagaacctaattctaacatcaaaacaa 12462381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14580905 - 14580804
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||| ||| ||||||||  ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  14580905 actccccaaatcagtttacagatatgaaatgagatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 14580806  T
Q  101 aa 102  Q
    ||    
T  14580805 aa 14580804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15103687 - 15103614
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| |  ||  || ||||||||||||||||||||||||||| |||  |||||||    
T  15103687 actccccaaattagtttacagatataaaactaagtgttgtatgcaaccagaacctatttctcacatcaaaacaa 15103614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15436918 - 15436817
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||| ||||  ||  ||||| ||||||||||||||||||||||||||||  ||||||    || |||| |||||| ||||||||    
T  15436918 actccccaaatcagtttacacatgtaaaactaaatgctgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaa 15436819  T
Q  101 aa 102  Q
    ||    
T  15436818 aa 15436817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18048573 - 18048512
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  18048573 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 18048512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18055052 - 18054991
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  18055052 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 18054991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10520613 - 10520677
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  10520613 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaaca 10520677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11340532 - 11340596
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| | |||| || |||| ||||||||||||| ||| ||||||||    
T  11340532 actccccaaattagtttacagatatataattaagtgttctatgcaaccagaaactaattctaaca 11340596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12555268 - 12555332
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||| ||||||||||||||||||||  ||  || || ||||||||||||||||||||||||||||    
T  12555268 actctccaaattagtttacagatgtaaaactaagtgctgtatgcaaccagaacctatttctaaca 12555332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14129030 - 14129094
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  14129030 actccccaaattagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 14129094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14135876 - 14135940
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  14135876 actccccaaattagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 14135940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14432848 - 14432912
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  14432848 actccccaaattagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 14432912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15097311 - 15097251
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttct 61  Q
    ||||||||||||||||||||||| |  ||  || |||||||||||||||||||||||||||    
T  15097311 actccccaaattagtttacagatataaaactaagtgttgtatgcaaccagaacctatttct 15097251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17182058 - 17181994
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  17182058 actccccaaattagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 17181994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18436570 - 18436506
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| | |||| || |||| ||||||||||||| ||| ||||||||    
T  18436570 actccccaaattagtttacagatatataattaagtgttctatgcaaccagaaactaattctaaca 18436506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 19617357 - 19617425
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  19617357 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 19617425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23200840 - 23200777
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  23200840 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 23200777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23506967 - 23506904
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  23506967 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 23506904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29796557 - 29796620
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  29796557 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 29796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29800376 - 29800439
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  29800376 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 29800439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 41781100 - 41781041
Alignment:
Q  159 caaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||||| ||| | |||| |||||||| ||||||| |||||||||||||||||||||    
T  41781100 caaaattagatttttaatctatattattgagagtaaacttcacccttaccttaattcaga 41781041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14168898 - 14168797
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||||||||||||||  | ||| |  |||||||||||  ||||||||||||||||||  ||||||    ||||||| |||||  ||||||||    
T  14168898 actccccaaattagtttacagatacgaaataacttgttgtatgcactcagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaa 14168799  T
Q  101 aa 102  Q
    ||    
T  14168798 aa 14168797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14173145 - 14173044
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||||||||||||||  | ||| |  |||||||||||  ||||||||||||||||||  ||||||    ||||||| |||||  ||||||||    
T  14173145 actccccaaattagtttacagatacgaaataacttgttgtatgcactcagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaa 14173046  T
Q  101 aa 102  Q
    ||    
T  14173045 aa 14173044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20579308 - 20579247
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || || |||| ||| |||||| |||||||| |||||||    
T  20579308 actccccaaattagtttacagatatgaaacgaaaggttttatgcacccagaacccatttcta 20579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35962079 - 35962018
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||| ||||||||||||| |||||| |  ||||||||  |||||||||||||||    
T  35962079 actccccaaattggtttacagatgtgaaatgaattactgtatgcactcagaacctatttcta 35962018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12454851 - 12454915
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| ||| || |||||||||| ||||||||    
T  12454851 actccccaaattagtttacagataggcaatgaagtgttctatacatccagaacctaattctaaca 12454915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14287467 - 14287403
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  14287467 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 14287403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15722558 - 15722494
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  15722558 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 15722494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16475482 - 16475418
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||||| || |||||  ||||||||||| ||||||    
T  16475482 actccccaaatcagtttacagatatgaaatgaaatgctgcatgcactcagaacctattcctaaca 16475418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16184801 - 16184738
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    |||||||||||| ||||||||||||| ||| |  || ||||||||  |||||||||||||||||    
T  16184801 actccccaaattggtttacagatgtgaaataacttgctgtatgcactcagaacctatttctaac 16184738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23665166 - 23665103
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  || |||| |||||||||    
T  23665166 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcaaaacccatttctaac 23665103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 5186445 - 5186407
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  5186445 aagtaaacctcacccttaccttaattcagaatgaaaaat 5186407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 11340710 - 11340748
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  11340710 aagtaaacctcacccttaccttaattcagaatgaaaaat 11340748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 18436393 - 18436355
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  18436393 aagtaaacctcacccttaccttaattcagaatgaaaaat 18436355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 30602063 - 30602025
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  30602063 aagtaaacctcacccttaccttaattcagaatgaaaaat 30602025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 81176 - 81122
Alignment:
Q  270 cccaaaact-tgtctgtacataaaagcagttctgacttctcccttttcttaactccc 325  Q
    ||||||||| ||||||||| ||||||||||||||||||||  |||||| ||||||||    
T  81176 cccaaaactctgtctgtacgtaaaagcagttctgacttct--cttttcctaactccc 81122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 11854618 - 11854542
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||| ||||||  ||  ||||| ||||||| | ||||||||||||||||||||||||||  |||||||    
T  11854618 tgttaaaccaaaatcagaattcaataactacactattgaa-gcaaacctcacccttaccttaattcagaaggaaaaat 11854542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Complemental strand, 15085131 - 15085102
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  15085131 aagtaaacctcacccttaccttaattcaga 15085102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Complemental strand, 15436730 - 15436701
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  15436730 aagtaaacctcacccttaccttaattcaga 15436701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3328622 - 3328686
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||  ||||| ||||| ||  ||||||||||||||||||    
T  3328622 actccccaaatcagtttacagatatgcaactaaatgctgtatacactcagaacctatttctaaca 3328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11879858 - 11879922
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||| | ||||||||    
T  11879858 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaaca 11879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12429650 - 12429714
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||| ||||| ||| |  || ||||||||  ||||||||||||||||||    
T  12429650 actccccaaattggtttacaaatgtgaaataacttgatgtatgcactcagaacctatttctaaca 12429714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13963383 - 13963319
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||| ||| ||||||||    
T  13963383 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaaca 13963319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14281001 - 14280937
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  || |||| ||||||||||    
T  14281001 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcataacccatttctaaca 14280937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15085308 - 15085244
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| | | |  |||||||||||  ||||||||||| ||||||    
T  15085308 actccccaaattggtttacagatgtgaattaacttgttgtatgcactcagaacctattcctaaca 15085244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19600629 - 19600693
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||| |||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  19600629 actcaccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 19600693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46348099 - 46348035
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  ||  |||||||  ||||||||||||||||||    
T  46348099 actccccaaattggtttacagatgtgaaataacttgcagtatgcactcagaacctatttctaaca 46348035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 27124 - 27372
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||||||||||||||| ||||| ||||| |||| ||||| || |||||||||||||||||| ||||||||||||||| ||||||||    
T  27124 actccccaaatcagtttacagatgtgtaattaaatgatgtatacaactagaacataattctaacactaaaacaaaagtttctaccctcaattcacccaaa 27223  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    ||||||||||||||||| |||| ||||||||||||||  |  || ||  ||||||||||||||| |||||| || |||| | ||||||||||||||||||    
T  27224 aatcaaagaaccaaaacttaacccaaattcccaatttctaaccaaaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctca 27323  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||| ||||||||| |||| | ||||||||||||||||||||||||||||    
T  27324 ccctcaccttaatttagat-ggaaaatctctacagaatctggttctcttg 27372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14430 - 14647
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||||||||||||||||| ||   ||||| ||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||    
T  14430 actccccaaattagtttacagatgtatacgtaaatgctgtatgcaaccagaacctatttctaacatcaaaacat-ggtttctaccctcaatccacccaaa 14528  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaattt-cattctacattattgaaagtaaacctc 199  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||  | |||| |||| || |||||||||||    
T  14529 aatcaaagaaccaaaacctaacccaaattccaaattttcatacagaacaatgttaaaccaaaatcagaatttaaaatctatattactg-aagtaaacctc 14627  T
Q  200 acccttaccttaattcagat 219  Q
    ||||||||||||||||||||    
T  14628 acccttaccttaattcagat 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 621 - 838
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||| || ||||||||||||  ||||||| |||||||||||||||||||||||||    
T  621 actccccaaattagtttacagatgtataactaaatgttgtatgcaaccaaaaactatttctaacatcaaaacaa-ggtttctaccctcaatccacccaaa 719  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaattt-cattctacattattgaaagtaaacctc 199  Q
    | |||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  | |||| | || || ||||| |||||    
T  720 attcaaagaaacaaaacctaacccaaattcccaattttcatacagaacaatgttaaaccaaaatcagaatttaaaatctatactactg-aagtatacctc 818  T
Q  200 acccttaccttaattcagat 219  Q
    ||||||||||||||||||||    
T  819 acccttaccttaattcagat 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 3132 - 2796
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | || |||| |||||| ||||||||    
T  3132 actccccaaatcagtttacagatgtgtaatgaaatgttgtatgcaaccaaaacctatttctaacacgaaaacaatgattcctacactcaattcacccaaa 3033  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    || ||||||| |||| |  ||| |||| |||| | ||||   || ||   |||||||||||||| ||||||  | |||||| ||||||||| ||||||||    
T  3032 aaccaaagaatcaaacctaaactcaaaatccccaatttctaccataaacctgttaaaccaaaatcagaattataatctacactattgaaagcaaacctca 2933  T
Q  201 cccttaccttaattcagatagaaaaatctctacagaatctggttctcttg----------cttattcttggtttttctccccaaaacttgtctgtacata 290  Q
    |||| ||||||| || ||  ||| |||||||||  | |||||||||||||          ||| |||||||||||||| |||||||||||| ||||| ||    
T  2932 ccctcaccttaaatc-gaatgaacaatctctacgaattctggttctcttggctcttctcccttgttcttggtttttct-cccaaaacttgtttgtacgta 2835  T
Q  291 aaagcagttctgacttctcccttttcttaactcccaaac 329  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2834 aaagcagttctgacttctcccttttcctaactcccaaac 2796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 95582 - 95645
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||| | |||||||||    
T  95582 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaatccatttctaac 95645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 21120969 - 21120721
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||| | |||| || ||||||||||||||||||||||||||| |||  | ||| ||||    
T  21120969 actccccaaaacagtttacagaagtgtaatgaaatgttgtatgcaatctgaacataattctaacactaaaacaaaggtttctacactcttttccatccaa 21120870  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||  ||||||| || || ||||| ||||||||||||||| || |||||||||||||||||||||| |||||| || |||| | |||||||||||||| ||    
T  21120869 aac-caaagaatcataatctaacccaaattcccaattttaatccagaactatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacatc 21120771  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    || ||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  21120770 actcttaccttaattcagat-gaacaaattctacagaatctggttctcttg 21120721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 25365270 - 25365024
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| ||||| ||||||||| | ||||  ||| ||||||||||||||| | || |||| || ||| ||||||||    
T  25365270 actccccaaaacagtttacagaagtgtaataaaatgatgtatgcaatctgaacacattcctaacactaaaacaatgattcctacacttaattcacccaaa 25365171  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||| ||||| |||| |||| || ||||||||||||||  |  |||||  ||||||||||||||| ||||||  |  ||| | |||||||||||||||||    
T  25365170 aatccaagaatcaaa-cctagacccaaattcccaatttctac-cagaaacatgttaaaccaaaatcagaattagaaactatactattgaaagtaaacctc 25365073  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaa-tctggttctct 248  Q
    ||||||||||||| |||||| ||| || |||||||||| |||||||||||    
T  25365072 acccttaccttaaatcagat-gaacaaactctacagaattctggttctct 25365024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 22795961 - 22795797
Alignment:
Q  50 gaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaac 148  Q
    |||| |||||||||||||||||||| |||| |||| |||| |||  |||||| || ||||| ||||||||| || ||||||||||||||  |  ||||||    
T  22795961 gaacatatttctaacactaaaacaatggttcctacactcattccgtccaaaattcgaagaatcaaaacctagacccaaattcccaatttctac-cagaac 22795863  T
Q  149 tatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    || ||||||||||||| ||||||  | || | | ||||||||||||||||||||||||||||||||    
T  22795862 taggttaaaccaaaatcagaattataatccatactattgaaagtaaacctcacccttaccttaatt 22795797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 17634724 - 17634935
Alignment:
Q  3 tccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaaaa 101  Q
    ||||||||  ||||||||||||| |||||| ||  ||| | ||||| ||||  ||||||||||||||| ||| ||||||||| |||   |||| || |||    
T  17634724 tccccaaaacagtttacagatgtataatgagatactgtctacaacctgaacacatttctaacactaaagcaatggtttctacactcttttccatcc-aaa 17634822  T
Q  102 atcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    ||||||||| |||| |  ||| ||||||||||||||||   || ||  |||||||| ||||||| |||||| || |||||| ||||||||||||||||||    
T  17634823 atcaaagaatcaaatctaaacccaaattcccaattttctaccaaaaacatgttaaatccaaaatcagaattacaatctaca-tattgaaagtaaacctca 17634921  T
Q  201 cccttaccttaatt 214  Q
    ||||||||||||||    
T  17634922 cccttaccttaatt 17634935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 20913681 - 20913450
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||| || |||||||||||||||  ||| ||  | || |||| |||||| |||||| |    
T  20913681 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcaatcataacctatttctaacatcaaaccagtgattcctacactcaattcacccata 20913582  T
Q  101 aatcaaagaaccaaaacctaacgc-aaattcccaattttcatacagaactatgttaaaccaaaattagaattt-cattctacattattgaaagtaaacct 198  Q
    || |||||||   ||    ||| | |||| ||||| ||||||||| ||| ||||||||||||||| |||||||  | |||| | || || ||||||||||    
T  20913581 aaccaaagaattcaacttaaacccaaaatccccaaatttcatacataacaatgttaaaccaaaatcagaatttaaaatctatactactg-aagtaaacct 20913483  T
Q  199 cacccttaccttaattcagatagaaaaatctcta 232  Q
    |||||||||||||| |||||| ||| ||||||||    
T  20913482 cacccttaccttaaatcagat-gaacaatctcta 20913450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 24669174 - 24668966
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  |||||||| | ||||||| ||||| ||||||||  | |||| |||||||| ||||||||||| ||||||||| |||  | ||| ||||    
T  24669174 actccccaaaacagtttacaaaagtgtaataaaatgctgtatgcagtctgaacatatttctatcactaaaacaa-ggtttctacactcttttccatccaa 24669076  T
Q  100 aaatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    ||  ||||||| || || |||| | ||||||||||||||  |  |||||   |||||||||||||| ||||||  | |||||| |||||||||||||||     
T  24669075 aac-caaagaatcataatctaaacccaaattcccaatttctac-cagaaacctgttaaaccaaaatcagaattataatctacactattgaaagtaaaccc 24668978  T
Q  199 cacccttacctt 210  Q
    ||||||||||||    
T  24668977 cacccttacctt 24668966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19036310 - 19036380
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaa 71  Q
    |||||||||||||||||||||||  | ||  ||||||||||||||  ||||||||||||||||||||||||    
T  19036310 actccccaaattagtttacagataagaaactaaatgttgtatgcactcagaacctatttctaacactaaaa 19036380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25106816 - 25106756
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttct 61  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||  ||||||||||||||    
T  25106816 actccccaaatcagtttacagatgtgaaatgaaatattgtatgcactcagaacctatttct 25106756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 25268296 - 25268362
Alignment:
Q  256 tcttggtttttctccccaaaacttgtctgtacataaaagcagttctgacttctcccttttcttaactccc 325  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||  |||||| ||||||||    
T  25268296 tcttggtttttctccc-aaaacttgtttgtacgtaaaagcagttctgacttct--cttttcctaactccc 25268362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20724841 - 20724914
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||| |||||||| || || ||  ||||| ||||||||||||||||||||||||||||  |||||||    
T  20724841 actccccaaatcagtttacaaatatgaaactaaatgatgtatgcaaccagaacctatttctaacatcaaaacaa 20724914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27786529 - 27786590
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  27786529 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 27786590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27791750 - 27791811
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  27791750 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 27791811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 6743361 - 6743293
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  6743361 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 6743293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8889316 - 8889256
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttct 61  Q
    ||||||||||||||||||||||| || ||  ||||| |||||||||||| |||||||||||    
T  8889316 actccccaaattagtttacagatatgaaactaaatgctgtatgcaaccataacctatttct 8889256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15642636 - 15642572
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| |||||||||| |||||| ||||||||    
T  15642636 actccccaaattagtttacagataggcaatgaagtgttctatgcaaccataacctaattctaaca 15642572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19702830 - 19702766
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||| || ||||  |||||||||||||||| ||||||||    
T  19702830 actccccaaattagtttacagatatgaaattaagtgtttaatgcaaccagaacctaattctaaca 19702766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 43694462 - 43694530
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  43694462 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 43694530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10684978 - 10684915
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  10684978 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 10684915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 24659606 - 24659673
Alignment:
Q  6 ccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    |||||||||||||||||| || ||||||||||||||  ||  ||||||||||||||||| | ||||||    
T  24659606 ccaaattagtttacagatatgaaatgaaatgttgtacacactcagaacctatttctaaccccaaaaca 24659673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27295346 - 27295283
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  27295346 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 27295283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 21132644 - 21132578
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattca 216  Q
    |||||||| |||||| |||||| || | || | ||||||||||||| ||||||||||||||||||||    
T  21132644 atgttaaatcaaaatcagaattacaatttatactattgaaagtaaaactcacccttaccttaattca 21132578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25174697 - 25174759
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaa 63  Q
    ||||||||||||||||||||||||   ||  || |||||||||||||||||||||| ||||||    
T  25174697 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaa 25174759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12573144 - 12573197
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacc 54  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| ||||||||    
T  12573144 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacc 12573197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19648893 - 19648820
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| || ||||||| | |||||| |  ||||||| ||||||||||  |||||||    
T  19648893 actccccaaattagtttacagatatgaaatgaaaggctgtatgtactcagaacccatttctaacatcaaaacaa 19648820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23753617 - 23753718
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||| |||||||||| |||||||| ||| |  || ||||||||  ||||||||||||||||||  | |||||   ||||||| |||||| ||||||||    
T  23753617 actcccgaaattagtttgcagatgtgaaataacttgctgtatgcactcagaacctatttctaacatcagaacaacaatttctacactcaattcacccaaa 23753716  T
Q  101 aa 102  Q
    ||    
T  23753717 aa 23753718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36801346 - 36801407
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||||||||||||||  | |||||| |||| |||||||||| |||||| |||||    
T  36801346 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccataacctaattcta 36801407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 201683 - 201751
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| |||| |||||||||| ||||||    
T  201683 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcagccttaccttagttcaga 201751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4078213 - 4078277
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||||||| ||||||||    
T  4078213 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacctaattctaaca 4078277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 22860797 - 22860861
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||| |||   ||  || |||||||||||||||||||||| ||||||||    
T  22860797 actccccaaattagtttacatatgcaaaactaagtgttgtatgcaaccagaacctaattctaaca 22860861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24653144 - 24653216
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    |||||||||||||||||||| || || ||||||||| ||||  ||  ||||||||||||||||| | ||||||    
T  24653144 actccccaaattagtttacatatatgaaatgaaatgctgtacacactcagaacctatttctaaccccaaaaca 24653216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25268031 - 25268095
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| |  ||  || || ||||||||||||||||||||||||||||    
T  25268031 actccccaaatcagtttacagatataaaactaagtgctgtatgcaaccagaacctatttctaaca 25268095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28970616 - 28970552
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  ||||||||| |  ||||||||||||||||||    
T  28970616 actccccaaattggtttacagatgtgaaataacttgttgtatgtactcagaacctatttctaaca 28970552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32910828 - 32910764
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||    |||||| |||  ||||||||||||||||| ||||||||    
T  32910828 actccccaaattagtttacagataaacaatgaagtgtcctatgcaaccagaacctaattctaaca 32910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 23149625 - 23149660
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||| |||||||||||||||||||||||||||||    
T  23149625 tattgagagtaaacctcacccttaccttaattcaga 23149660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23291753 - 23291792
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgt 40  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  23291753 actccccaaattagtttacagatatgaaatgaaatgttgt 23291792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 23561415 - 23561450
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||| |||||||||||||||||||||||||||||    
T  23561415 tattgagagtaaacctcacccttaccttaattcaga 23561450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 22012300 - 22012262
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  22012300 aagtaaacctcacccttaccttaattcagaatgaaaaat 22012262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22012478 - 22012408
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaa 71  Q
    ||||||||||| |||||||||||   |||| || |||| ||||| ||||||||||| |||||||| |||||    
T  22012478 actccccaaatcagtttacagatacataattaagtgttctatgcgaccagaacctaattctaacattaaaa 22012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 30195736 - 30195652
Alignment:
Q  128 ttcccaattttcatacagaactatgttaaac-caaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaa 212  Q
    |||||||||||||  ||||||| |||||||| |||||| ||||||| |  |||||| ||||||| ||||||||||||||||||||||    
T  30195736 ttcccaattttcac-cagaactctgttaaacacaaaatcagaatttaaaatctacactattgaa-gtaaacctcacccttaccttaa 30195652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 35243723 - 35243685
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  35243723 aagtaaacctcacccttaccttaattcagaatgaaaaat 35243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12579626 - 12579679
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacc 54  Q
    ||||||||||||||||||||||| || ||||||| ||| || ||| ||||||||    
T  12579626 actccccaaattagtttacagatatgcaatgaaaggttttacgcacccagaacc 12579679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Complemental strand, 17582647 - 17582618
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  17582647 aagtaaacctcacccttaccttaattcaga 17582618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 22841919 - 22841980
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| ||||||  | |||| || ||||| ||||||||||||||||||||||    
T  22841919 atgttaaatcaaaatcagaattataatctatatcattgagagtaaacctcacccttacctta 22841980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Complemental strand, 25106627 - 25106598
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  25106627 aagtaaacctcacccttaccttaattcaga 25106598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34844 - 34908
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||| ||| ||||||||    
T  34844 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaaca 34908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23333393 - 23333465
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    ||||||||||||||||||||||| || ||||||||| |||   ||  ||||||| ||||||||| | ||||||    
T  23333393 actccccaaattagtttacagatatgaaatgaaatgatgttcacactcagaacccatttctaaccccaaaaca 23333465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23672067 - 23672003
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||| |||   ||  || ||||||||||||||| |||||| ||||||||    
T  23672067 actccccaaattagtttacatatgcaaaactaagtgttgtatgcaaccaaaacctaattctaaca 23672003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27730280 - 27730344
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||| ||| ||||||||    
T  27730280 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaaca 27730344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 38929055 - 38929019
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  38929055 tattgaaagtaaacctcaccattatcttaattcagat 38929019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44090429 - 44090365
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||||||||||| ||| ||||||||    
T  44090429 actccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaaca 44090365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 8578 - 8330
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||| | || |||| |||||| ||||||||    
T  8578 actccccaaaacagtttacagatgtgtaatgaaatgctgtatgcaattagaacatatttctaacactaaaacaatgattcctacactcaattcacccaaa 8479  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| | ||||||| || ||||||||||||||| |  ||||||||||||||| |||||| |||||| ||  ||||| |||||||||||||||||    
T  8478 aatcaaagaatc-aaacctagacccaaattcccaatttttaaccagaactatgttaaatcaaaatcagaattacaacctacactattgaaagtaaacctc 8380  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||| ||| |||||| ||| |||||||||  | ||||| |||||||    
T  8379 acccttaccgtaaatcagat-gaacaatctctacgaattctggctctcttg 8330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 2271 - 2061
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| | ||||||| || ||| ||||||||    
T  2271 actccccaaaacagtttacagaagtgtaatgaaatgttgtatgcaaccaaaacttatttctaacactaaaacaatgatttctacacttaattcacccaaa 2172  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| |||| |||| || ||||||||||||||  |  |||||  ||||||||||||||| |||||| || |||| | |||||||||||||||||    
T  2171 aatcaaagaatcaaa-cctagacccaaattcccaatttctac-cagaaacatgttaaaccaaaatcagaattacaatctatactattgaaagtaaacctc 2074  T
Q  200 acccttaccttaa 212  Q
    |||||||||||||    
T  2073 acccttaccttaa 2061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26706 - 26770
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  26706 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 26770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 13253 - 13471
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  13253 actccccaaatcagtttatagatgtgtaataaaatgttgtatgcaagcagaacctatttctaacaccaaaacaaaggtttctacctccaatccacccaaa 13352  T
Q  101 aatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctca 200  Q
    |||||||||| |||| |  ||| |||| |||| | ||||   || ||   ||||||| |||||| |||||| || |||||| ||||||||| ||| ||||    
T  13353 aatcaaagaatcaaacctaaactcaaaatccccaatttctaccataaacctgttaaatcaaaatcagaattacaatctacactattgaaagcaaatctca 13452  T
Q  201 cccttaccttaattcagat 219  Q
    |||||||||||| ||||||    
T  13453 cccttaccttaaatcagat 13471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 5e-44; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 250
Target Start/End: Complemental strand, 17529 - 17284
Alignment:
Q  4 ccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaat 103  Q
    ||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||| | || |||| |||||| ||||||||||     
T  17529 ccccaaatcggtttacagatgtgtaataaaatgctggatgcaaccagaacctatttttaacactaaaacaatgattcctacactcaattcacccaaaaac 17430  T
Q  104 caaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcaccc 203  Q
    ||||||| |||| |  ||| |||| |||| | ||||   || ||   |||||||| ||||| |||||| || |||||| ||||||||| |||||||||||    
T  17429 caaagaatcaaatctaaactcaaaatccccaatttctaccataaacctgttaaacgaaaatcagaattacaatctacactattgaaagcaaacctcaccc 17330  T
Q  204 ttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||| ||||||| || |||||||||| | |||||||||||||    
T  17329 ttaccttaaatcagata-aacaatctctacaaattctggttctcttg 17284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 259507 - 259571
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||| | ||||||||||    
T  259507 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaatccatttctaaca 259571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 265922 - 265986
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||| ||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  265922 actccccaaatcagtttactgatatgcaatgaaaggttatatgcactcagaacccatttctaaca 265986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 250
Target Start/End: Original strand, 14822180 - 14822425
Alignment:
Q  4 ccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaat 103  Q
    ||||||||  ||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||| | || |||| |||||| ||||||||||     
T  14822180 ccccaaatcggtttacagatgtgtaataaaatgctggatgcaaccagaacctatttttaacactaaaacaatgattcctacactcaattcacccaaaaac 14822279  T
Q  104 caaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcaccc 203  Q
    ||||||| |||| |  ||| |||| |||| | ||||   || ||   |||||||| ||||| |||||| || |||||| ||||||||| |||||||||||    
T  14822280 caaagaatcaaatctaaactcaaaatccccaatttctaccataaacctgttaaacgaaaatcagaattacaatctacactattgaaagcaaacctcaccc 14822379  T
Q  204 ttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||||||| ||||||| || |||||||||| | |||||||||||||    
T  14822380 ttaccttaaatcagata-aacaatctctacaaattctggttctcttg 14822425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13480350 - 13480286
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  |||||||| |||| ||||||||||||||||| ||||||||    
T  13480350 actccccaaattagtttacagataagtaatgaagtgttctatgcaaccagaacctaattctaaca 13480286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21882332 - 21882405
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||||||||  | |||||| |||| |||||||||||||| || ||||||||||| |||||    
T  21882332 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccagaacataattctaacactagaacaa 21882405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30239850 - 30239951
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||  || |||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  30239850 actccccaaattagtttacagatatgaaatgaaatgctgtatgcactcaaaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 30239949  T
Q  101 aa 102  Q
    ||    
T  30239950 aa 30239951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16485474 - 16485538
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||| ||||||||    
T  16485474 actccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctaattctaaca 16485538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18272093 - 18272157
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||||  ||  || || ||||||||||||||||||||||||||||    
T  18272093 actccccaaattagtttacagatgtaaaactaagtgctgtatgcaaccagaacctatttctaaca 18272157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15325702 - 15325763
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||| ||||||||||| || ||  ||||| |||||||||||||||||||||||||    
T  15325702 actccccaaatcagtttacagatatgaaactaaatgatgtatgcaaccagaacctatttcta 15325763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41799293 - 41799232
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  41799293 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 41799232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42702061 - 42702122
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  42702061 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 42702122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51601414 - 51601353
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  51601414 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 51601353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51607295 - 51607234
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  51607295 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 51607234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53748096 - 53748035
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  53748096 actccccaaattagtttacagatatgaaatgaaaggttttatgcacccagaacccatttcta 53748035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1584648 - 1584712
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   |||| || |||| ||||||||||||||||| ||||||||    
T  1584648 actccccaaattagtttacagatacataattaagtgttctatgcaaccagaacctaattctaaca 1584712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15004489 - 15004425
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  || ||||| |||||||||    
T  15004489 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcataacctgtttctaaca 15004425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15547387 - 15547451
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || |||||| ||||||||||   ||||| ||||||||||||    
T  15547387 actccccaaattagtttacagatatgaaatgaattgttgtatgcgctcagaaactatttctaaca 15547451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16228467 - 16228403
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  16228467 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaaca 16228403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 635104 - 635041
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  635104 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 635041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16445761 - 16445824
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  16445761 actccccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 16445824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11201468 - 11201406
Alignment:
Q  150 atgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| ||||||| |||||| || |||| | |||||||||||||||||||||||||||||    
T  11201468 atgttaaatccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 11201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 11208199 - 11208137
Alignment:
Q  150 atgttaaa-ccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| ||||||| |||||| || |||| | |||||||||||||||||||||||||||||    
T  11208199 atgttaaatccaaaatcagaattacaatctatactattgaaagtaaacctcacccttacctta 11208137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16999509 - 16999448
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||| ||||||||||||| |||||| |  ||||||||  |||||||||||||||    
T  16999509 actccccaaattggtttacagatgtgaaatgaattactgtatgcactcagaacctatttcta 16999448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18165633 - 18165560
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||||   ||  || || ||||||||||||||||||| ||||||||  |||||||    
T  18165633 actccccaaattagtttacagatgcaaaactaagtgctgtatgcaaccagaacctaattctaacatcaaaacaa 18165560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 13898889 - 13898853
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcagat 219  Q
    ||||||||||||||||||| |||||||||||||||||    
T  13898889 tattgaaagtaaacctcactcttaccttaattcagat 13898853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14063544 - 14063608
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||    ||  ||||||||||||||||||||||||| ||||||||    
T  14063544 actccccaaatcagtttacagatactaaactaaatgttgtatgcaaccagaacctaattctaaca 14063608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23122434 - 23122498
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  23122434 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 23122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23724142 - 23724078
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  23724142 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 23724078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 30873599 - 30873651
Alignment:
Q  258 ttggtttttctc-cccaaaacttgtctgtacataaaagcagttctgacttctc 309  Q
    ||||||||| || ||||| |||||||||||| |||||||||||||||||||||    
T  30873599 ttggtttttttctcccaacacttgtctgtacgtaaaagcagttctgacttctc 30873651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41528433 - 41528369
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  41528433 actccccaaatcagtttacagatgctaaactaagtgttgtatgcaaccagaacctaattctaaca 41528369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 14507032 - 14507095
Alignment:
Q  2 ctccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  14507032 ctccccaaatcagtttacagatatgcaatgaaaagttatatgcactcagaacccatttctaaca 14507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 20941099 - 20941158
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||||    
T  20941099 cccaaattagtttacagatatgcaatgaaaggttttatgcactcagaacccatttctaac 20941158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 29381972 - 29381890
Alignment:
Q  146 aactatgttaaac-caaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||| |||||||| |||||| ||||||| ||  ||||||||||||| |||||||||| |||||||||||||||||  |||||||    
T  29381972 aactctgttaaacacaaaatcagaatttaataactacattattgaa-gtaaacctcatccttaccttaattcagaatgaaaaat 29381890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 3863326 - 3863288
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  3863326 tctacactattgagagtaaacctcacccttaccttaatt 3863288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 3872083 - 3872045
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  3872083 tctacactattgagagtaaacctcacccttaccttaatt 3872045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 7360164 - 7360202
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  7360164 aagtaaacctcacccttaccttaattcagaatgaaaaat 7360202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 19127505 - 19127467
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  19127505 aagtaaacctcacccttaccttaattcagaatgaaaaat 19127467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 52501467 - 52501505
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  52501467 aagtaaacctcacccttaccttaattcagaatgaaaaat 52501505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 5939843 - 5939872
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  5939843 aagtaaacctcacccttaccttaattcaga 5939872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13454557 - 13454630
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||| |||||||||| || |||||||   ||||||||  ||||||| ||||||||||  |||||||    
T  13454557 actccccaaattggtttacagatatgaaatgaaagtctgtatgcactcagaacccatttctaacatcaaaacaa 13454630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 16228327 - 16228259
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||| ||||||| ||  ||||| ||||||| | |||||||||||||||||||| ||||||    
T  16228327 tgttaaaccaaaatcagaatttaataactacactattgaa-gcaaacctcacccttaccttaaatcagat 16228259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 53904553 - 53904477
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||| ||||||  ||  ||||| ||||||| | ||||||||||||||||||||||||||  |||||||    
T  53904553 tgttaaaccaaaatcagaattcaataactacactattgaa-gcaaacctcacccttaccttaattcagaaggaaaaat 53904477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 3259154 - 3259118
Alignment:
Q  191 gtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||  |||||||    
T  3259154 gtaaacctcacccttaccttaattcagaatgaaaaat 3259118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3259334 - 3259270
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||   |||| || |||| | ||||||||||| ||| ||||||||    
T  3259334 actccccaaattagtttacagatacataattaagtgttctgtgcaaccagaaactaattctaaca 3259270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7359987 - 7360051
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||   |||| || |||| ||||| ||||||||||| ||||||||    
T  7359987 actccccaaatcagtttacagatacataattaagtgttctatgcgaccagaacctaattctaaca 7360051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 91949 - 91718
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaa 99  Q
    ||||||||||  ||||||||||  |||||| ||||||||||||||| | ||||  ||| ||||||||||||||| ||||||||| |||   |||| || |    
T  91949 actccccaaaacagtttacagaaatgtaataaaatgttgtatgcaatctgaacacattcctaacactaaaacaatggtttctacactcttttccatcc-a 91851  T
Q  100 aaatcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||||||||||| || || ||||| ||||||||||||||| |  |||||||||||||||| ||||| |||||| || |||| | |||||||||||||||||    
T  91850 aaatcaaagaatcataatctaacccaaattcccaatttt-aaccagaactatgttaaacgaaaatcagaattacaatctatactattgaaagtaaacctc 91752  T
Q  200 acccttaccttaattcagatagaaaaatctctaca 234  Q
    ||||||||||||||| |||| ||| ||||||||||    
T  91751 acccttaccttaatttagat-gaacaatctctaca 91718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 46094 - 46026
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  46094 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 46026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 51498 - 51430
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  51498 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 51430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 124265 - 124031
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaaaaatcaaagaac 111  Q
    |||||||||| ||||||| ||||||||||||||| | ||||  |||  ||||||| |||||| ||||||||| |||  | ||| |||||| |||| |||     
T  124265 agtttacagaagtgtaataaaatgttgtatgcaatctgaacacattcgtaacactgaaacaatggtttctacactcttttccatccaaaa-tcaa-gaat 124168  T
Q  112 caaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    || || ||||| ||||||||||||||| |  | |||||||||||||||||||| |||||| || |||||| |||||||||||||||||||||||||||||    
T  124167 cataatctaacccaaattcccaattttaac-cggaactatgttaaaccaaaatcagaattacaatctacactattgaaagtaaacctcacccttacctta 124069  T
Q  212 attcagatagaaaaatctctacagaatctggttctcttg 250  Q
    | |||||| ||| |||||||||| | |||||||||||||    
T  124068 aatcagat-gaacaatctctacaaattctggttctcttg 124031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2016 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold2016
Description:

Target: scaffold2016; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 191 - 1
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaacc 112  Q
    |||||||||| ||| ||||||||  |||||||||||||||| |||||||||||||||||||| | || |||| ||||||||||||||||||||||||| |    
T  191 agtttacagaagtgcaatgaaatactgtatgcaaccagaacatatttctaacactaaaacaatgattcctacactcaatccacccaaaaatcaaagaatc 92  T
Q  113 aaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcaccct 204  Q
    ||| |  ||| |||||||||||  |||   |||||  ||||||||||||||| |||||| || |||| | |||||||| |||||||||||||    
T  91 aaacctaaactcaaattcccaa-cttctaccagaaacatgttaaaccaaaatcagaattacaatctatactattgaaattaaacctcaccct 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1068 - 931
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||||| | || |||| |||| |||| |||||    
T  1068 actccccaaaacagtttacagaagtgtaatgaaatgctgtatgcaacctgaacatatttctaacactaaaacaatgattcctacactcattccatccaaa 969  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattt 137  Q
    |||||||||||||||||||| || ||||||||||||||    
T  968 aatcaaagaaccaaaacctagacccaaattcccaattt 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 71397 - 71602
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaaaaatcaaagaac 111  Q
    |||||||||| ||||||| ||||||||||||||| | ||||  ||| |||||||||| |||| ||||||||| |||   |||| || ||||| ||||||     
T  71397 agtttacagaagtgtaataaaatgttgtatgcaatctgaacacattcctaacactaacacaatggtttctacactcttttccatcc-aaaattaaagaat 71495  T
Q  112 caaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    || || |||||  |||||||||||||| |  |||||||||||||||||||||| |||||| || |||| | ||||||||||||| |||||||||||||||    
T  71496 cataatctaaccaaaattcccaatttt-aaccagaactatgttaaaccaaaatcagaattacaatctatactattgaaagtaaatctcacccttacctta 71594  T
Q  212 attcagat 219  Q
    ||||||||    
T  71595 attcagat 71602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 143490 - 143738
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  ||||||||||  |||||| || |||||| | ||||| |||   ||| ||||||||||||||| |||| |||| |||| ||||  ||||    
T  143490 actccccaaaacagtttacagaattgtaataaagtgttgtctacaacctgaaagcatt-ctaacactaaaacaatggttcctacactcattccattcaaa 143588  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||| ||||| ||||||||| ||  |||||||||||||||   |||||| ||||||||||||||| ||||||  | |||| | |||||||||||||||||    
T  143589 aatccaagaatcaaaacctagacctaaattcccaattttctaccagaaccatgttaaaccaaaatcagaattataatctatactattgaaagtaaacctc 143688  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    ||||| ||||||| |||||| ||| |||||||||| | |||||||| ||||    
T  143689 accctgaccttaaatcagat-gaacaatctctacaaattctggttcacttg 143738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 36392 - 36606
Alignment:
Q  2 ctccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaa 101  Q
    ||||||||| ||||||||||| ||||||||||||| | ||||||| | |||   ||| ||||||||||||||| ||||||||| |||| |||| | | ||    
T  36392 ctccccaaaatagtttacagaagtgtaatgaaatgctttatgcaatctgaatacatt-ctaacactaaaacaatggtttctacactcattccatctagaa 36490  T
Q  102 atcaaagaaccaaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcac 201  Q
     |||||||| |||| |  ||| ||||||||||||||  |  |||||  ||||||||||||||| ||||||  | |||| | || ||| ||||||||||||    
T  36491 ttcaaagaatcaaacctaaacccaaattcccaatttctac-cagaaacatgttaaaccaaaatcagaattataatctatactaatgagagtaaacctcac 36589  T
Q  202 ccttaccttaattcaga 218  Q
    |||||||||||||||||    
T  36590 ccttaccttaattcaga 36606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 62564 - 62500
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  62564 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 62500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 211
Target Start/End: Original strand, 67216 - 67244
Alignment:
Q  183 tattgaaagtaaacctcacccttacctta 211  Q
    |||||||||||||||||||||||||||||    
T  67216 tattgaaagtaaacctcacccttacctta 67244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6131 - 5912
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaa 99  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||||  | |||| || ||||||||||||||||||||||||||| |||   || | ||||    
T  6131 actccccaaatcaatttacagaagtgtaatgaaatgctgtatgcagtctgaacataattctaacactaaaacaaaggtttctacactcttttctatccaa 6032  T
Q  100 aaatcaaagaaccaaaacct-aacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    ||| ||||||| || ||||| ||| ||||||||||||||  |  || ||  ||||||||||||||| | |||| || |||| | ||||||||||||||||    
T  6031 aaa-caaagaatcataacctaaacccaaattcccaatttctaaccaaaaacatgttaaaccaaaatcaaaattacaatctatactattgaaagtaaacct 5933  T
Q  199 cacccttaccttaattcagat 219  Q
    |||||||||||||| ||||||    
T  5932 cacccttaccttaaatcagat 5912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 42284 - 42036
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  |||||||||| |||||| |||||| ||||||||  | |||| || ||||||||||||||||| |||||| || |||  | ||| ||||    
T  42284 actccccaaaacagtttacagaagtgtaaggaaatgatgtatgcagtctgaacataattctaacactaaaacaatggtttcaacactcttttccatccaa 42185  T
Q  100 aaatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    || |||||||| |  || |||| | ||||||||||||||| |  |||||||||||||||||||| | ||||||  | ||| || ||||||||||||||||    
T  42184 aa-tcaaagaatcgtaatctaaacccaaattcccaattttaac-cagaactatgttaaaccaaactcagaattataatctgcactattgaaagtaaacct 42087  T
Q  199 cacccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||||||||||||| |||||| ||| |||||||||| | | |||||||||||    
T  42086 cacccttaccttaaatcagat-gaacaatctctacaaattatggttctcttg 42036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 52979 - 52731
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaat-ccacccaa 99  Q
    ||||||||||  |||||||||| |||||| |||||| ||||||||  | |||| || ||||||||||||||||| |||||| || |||  | ||| ||||    
T  52979 actccccaaaacagtttacagaagtgtaaggaaatgatgtatgcagtctgaacataattctaacactaaaacaatggtttcaacactcttttccatccaa 52880  T
Q  100 aaatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    || |||||||| |  || |||| | ||||||||||||||| |  |||||||||||||||||||| | ||||||  | ||| || ||||||||||||||||    
T  52879 aa-tcaaagaatcgtaatctaaacccaaattcccaattttaac-cagaactatgttaaaccaaactcagaattataatctgcactattgaaagtaaacct 52782  T
Q  199 cacccttaccttaattcagatagaaaaatctctacagaatctggttctcttg 250  Q
    |||||||||||||| |||||| ||| |||||||||| | | |||||||||||    
T  52781 cacccttaccttaaatcagat-gaacaatctctacaaattatggttctcttg 52731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 46332 - 46548
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||| || |||| |||| |||| |||||| ||||||||    
T  46332 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaacctatttctaacaccaacacaatggttcctacactcaattcacccaaa 46431  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcata-cagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    |||||||||| | ||||||| || |||||||||||  ||| || || ||   | |||||||||||| ||||||    |||| | || || ||||||||||    
T  46432 aatcaaagaatc-aaacctagacccaaattcccaa--ttcctaccataaacctattaaaccaaaatcagaattaatatctatactactg-aagtaaacct 46527  T
Q  199 cacccttaccttaattcagat 219  Q
    |||||||||||||||||||||    
T  46528 cacccttaccttaattcagat 46548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 23823 - 24040
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||| |||| ||||||||| | ||||||||||||||||||||||  | ||||  ||||||||||||||| ||| ||||||||| | |  |||| | | |    
T  23823 actcctcaaactagtttacaaaagtgtaatgaaatgttgtatgcagtctgaacacatttctaacactaaa-caatggtttctacacactttccatctaga 23921  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatac-agaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    | |||||||| ||||||||| ||  | ||||||||||  | ||| ||||  ||||||||||||||| ||||||| | |||| | ||||||||||||||||    
T  23922 attcaaagaatcaaaacctagaccgatattcccaatt--cctaccagaaacatgttaaaccaaaatcagaattttaatctatactattgaaagtaaacct 24019  T
Q  199 cacccttaccttaattcagat 219  Q
    |||||||||||||||||||||    
T  24020 cacccttaccttaattcagat 24040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 2743 - 2939
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||  | ||||  |||||||||||| |||||| ||||||||| | |  |||| | | |    
T  2743 actccccaaactagtttacagaagtgtaatgaaatgctgtatgcagtctgaacacatttctaacact-aaacaatggtttctacacactttccatctaga 2841  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcata-cagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacct 198  Q
    | |||||||| | ||||||| || |||||||||||  ||| || || ||  ||||||||||||||| ||||||| | |||| | ||||||||||||||||    
T  2842 attcaaagaatctaaacctagacccaaattcccaa--ttcctaccataaacatgttaaaccaaaatcagaattttaatctatactattgaaagtaaacct 2939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 41007 - 40758
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||| | ||||||| ||||| |||||| || | ||||  ||| ||||||||||||||| |||||| || |||  | |   | ||    
T  41007 actccccaaaacagtttacaaaagtgtaataaaatgctgtatgaaatctgaacacattcctaacactaaaacaatggtttcaacactcttttccatctaa 40908  T
Q  101 aatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| || || |||| | ||||||||||||||| |  |||||||||||||| ||||||| | ||||  | |||||| |||||||||||||||||    
T  40907 aatcaaagaatcataatctaaacccaaattcccaattttaac-cagaactatgttaacccaaaatcaaaattataatctacactattgaaagtaaacctc 40809  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaa-tctggttctcttg 250  Q
    ||||||||||||| |||||| ||| || |||||||||| |||| ||||||||    
T  40808 acccttaccttaaatcagat-gaacaaactctacagaattctgattctcttg 40758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 21670 - 21885
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| || |||| || || ||||| ||||| ||||||||| |||||||||   ||| ||||||||| |||  |||| |||||    
T  21670 actccccaaaacagtttacagaagtataataaattgatgtatacaacctgaacctatt-ctaacactattgcaa-ggtttctacactctttccatccaaa 21767  T
Q  101 aatcaaagaaccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    |||||||||| |||||||||| | ||||| | ||||||  |  |||||||||||||||| ||||| ||||||  | |||| | |||||| ||||||||||    
T  21768 aatcaaagaatcaaaacctaaacccaaatcctcaatttctac-cagaactatgttaaacaaaaatcagaattataatctatactattgagagtaaacctc 21866  T
Q  200 acccttaccttaattcaga 218  Q
    |||||||||||||||||||    
T  21867 acccttaccttaattcaga 21885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 55293 - 55229
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  55293 actccccaaatcagtttacagatgtgaaatgaaatgttgtatgcaaccagaacctatttctaaca 55229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 61366 - 61257
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  61366 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcaatcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 61267  T
Q  101 aatcaaagaa 110  Q
    || |||||||    
T  61266 aagcaaagaa 61257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 59803 - 59694
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| || ||| | || || ||||||||||||||||||| ||||||||||||||||||  ||| ||  | || |||| ||| || ||||||||    
T  59803 actccccaaatcaggttatatatatgaaatgaaatgttgtatgcaatcagaacctatttctaacatcaaaccagtgattcctacactctattcacccaaa 59704  T
Q  101 aatcaaagaa 110  Q
    || |||||||    
T  59703 aaccaaagaa 59694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 59653 - 59585
Alignment:
Q  151 tgttaaaccaaaattagaatttcat-tctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||| ||||||  |  |||||| || |||| |||||||||||||||||||||||||||||    
T  59653 tgttaaaccaaaatcagaattaaaaatctacactactgaa-gtaaacctcacccttaccttaattcagat 59585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 329
Target Start/End: Complemental strand, 973 - 796
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaatctctacagaa-tctggttctct 248  Q
    ||||||||||||||| ||||||  | |||| | |||||||||||||| ||||||||||||||||||| |  ||| || |||||||||| |||||||||||    
T  973 atgttaaaccaaaatcagaattataatctatactattgaaagtaaacatcacccttaccttaattca-aacgaacaaactctacagaattctggttctct 875  T
Q  249 tgcttattcttggtttttctccccaaaacttgtctgtacataaaagcagttctgacttctcccttttcttaactcccaaac 329  Q
    ||  | ||||   || |||| |||||||||||  ||||| ||||| ||| ||||||||||||| |||| ||||||||||||    
T  874 tggctcttctcccttgttct-cccaaaacttgattgtacgtaaaaacagctctgacttctccc-tttcctaactcccaaac 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 1109 - 1053
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaa 69  Q
    |||||||||| ||||||| ||||||||||||||| | |||| |||||||| ||||||    
T  1109 agtttacagaagtgtaataaaatgttgtatgcaatctgaacatatttctatcactaa 1053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 26261 - 26508
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| ||||| ||||||||| | ||||  ||| ||||  ||||||||| | || |||| | |||| ||||||||    
T  26261 actccccaaaacagtttacagaagtgtaataaaatgctgtatgcaatctgaacacattcctaatgctaaaacaatgattcctacac-caattcacccaaa 26359  T
Q  101 aatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||| ||| || |||| |||| || ||||||||||||||  |  |||||  ||||||||||||||| |||||| ||  ||| | |||||||||||||| ||    
T  26360 aataaaaaaatcaaa-cctagacccaaattcccaatttctac-cagaaacatgttaaaccaaaatcagaattacaaactatactattgaaagtaaacgtc 26457  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaa-tctggttctcttg 250  Q
    ||||||||||| | |||||| ||| || ||||||| || |||||||||||||    
T  26458 acccttaccttgaatcagat-gaacaaactctacaaaattctggttctcttg 26508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4739 - 4638
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||  ||| ||  | ||||||| |||||| ||||||||    
T  4739 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcacccaaa 4640  T
Q  101 aa 102  Q
    ||    
T  4639 aa 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 19921 - 19820
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||||||||||||  ||||||||||||||||||  ||| ||  | ||||||| |||||| ||||||||    
T  19921 actccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcacccaaa 19822  T
Q  101 aa 102  Q
    ||    
T  19821 aa 19820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 18647 - 18895
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||  |||||||||| ||||||| ||||||||||||||| |  ||| |||||||| ||||||    | || |||||| |||  |||| |||||    
T  18647 actccccaaaacagtttacagaagtgtaataaaatgttgtatgcaatctaaacatatttctatcactaatgtcatggattctacactctttccatccaaa 18746  T
Q  101 aatcaaagaac-caaaacctaacgcaaattcccaattttcatacagaactatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctc 199  Q
    ||||||||||  ||||| ||||  | |||||||||  |  |  || ||  ||||||||||||||| ||||||  | |||| |  |||||||||||| |||    
T  18747 aatcaaagaaatcaaaatctaaacccaattcccaaact--aaccaaaaacatgttaaaccaaaataagaattataatctatacaattgaaagtaaatctc 18844  T
Q  200 acccttaccttaattcagatagaaaaatctctacagaa-tctggttctcttg 250  Q
    |||||||||||||||||||  ||| || |||||||||| |||||||||||||    
T  18845 acccttaccttaattcaga-cgaacaaactctacagaattctggttctcttg 18895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 329
Target Start/End: Original strand, 510 - 696
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaatctctacagaatct-ggttctct 248  Q
    ||||||||||||||| ||||||  | |||| | |||||||||||| ||||| |||||||||||||||||  ||| || ||||||||||| | ||||||||    
T  510 atgttaaaccaaaatcagaattataatctatactattgaaagtaa-cctcatccttaccttaattcagac-gaacaaactctacagaattttggttctct 607  T
Q  249 tg----------cttattcttggtttttctccccaaaacttgtctgtacataaaagcagttctgacttctcccttttcttaactcccaaac 329  Q
    ||          |||  |||||||||||||||| ||||||||  ||||| ||||| ||||||||||||||||| |||| ||||||||||||    
T  608 tggctcttctcccttgatcttggtttttctccc-aaaacttgattgtacgtaaaaacagttctgacttctccc-tttcctaactcccaaac 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 362 - 430
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaa 69  Q
    ||||||||||  |||||||||| ||||||| | ||||||||||||| | |||| ||||| || ||||||    
T  362 actccccaaaacagtttacagaagtgtaataacatgttgtatgcaatctgaacatatttatatcactaa 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 214
Target Start/End: Original strand, 6391 - 6557
Alignment:
Q  49 agaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaacct-aacgcaaattcccaattttcatacagaa 147  Q
    |||||||||||||||||||||||||| |||| |||| |||| |||  ||| || |  ||||| ||||||||  || ||||||||||| ||||   |||||    
T  6391 agaacctatttctaacactaaaacaatggttcctacactcactccgtccagaatttgaagaatcaaaacctcgacccaaattcccaa-tttctaccagaa 6489  T
Q  148 ctatgttaaaccaaaattagaattt-cattctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    ||| ||||||||||| | |||||||  | || | | ||||||||||||||||||||||||||||||||    
T  6490 ctaggttaaaccaaattcagaatttataatccatactattgaaagtaaacctcacccttaccttaatt 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 618 - 517
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||||||||||||||||||||||  ||||||    || |||| |||||| ||||||||    
T  618 actccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcacccaaa 519  T
Q  101 aa 102  Q
    ||    
T  518 aa 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30636 - 30700
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||  ||||| ||||||||||||||||||||||||||||    
T  30636 actccccaaattagtttacagatatgaaactaaatgctgtatgcaaccagaacctatttctaaca 30700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 11493 - 11455
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  11493 aagtaaacctcacccttaccttaattcagaatgaaaaat 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 71915 - 71979
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||||||||||||||||  ||||||| ||||||||||    
T  71915 actccccaaattagtttacagatatgaaatgaaatgttgtatgcactcagaacccatttctaaca 71979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 77547 - 77620
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||| ||||  | ||| |  ||||||||||| |||||||||||||||||||  |||||||    
T  77547 actccccaaattagtttatagatacgaaataacttgttgtatgcacccagaacctatttctaacatcaaaacaa 77620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 10070 - 10205
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| | |||||||||||| ||||||||  ||||||||  ||||||||||||||||||  ||||| | |||| |||| |||||| ||||| ||    
T  10070 actccccaaatcaatttacagatgtgaaatgaaatactgtatgcactcagaacctatttctaacatcaaaac-agggttcctacactcaattcaccc-aa 10167  T
Q  101 aatcaaagaa--ccaaaacctaacgcaaattcccaattt 137  Q
    ||||||||||  |||||| ||||| | ||||||||||||    
T  10168 aatcaaagaaatccaaaagctaactc-aattcccaattt 10205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 211
Target Start/End: Complemental strand, 100227 - 100029
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctacc--ctcaatccacccaaaaatcaaagaa 110  Q
    |||||||||| ||||||| || |||||| | ||||| |||   ||||||||||||||||||| |||||||||   |||  |||| |||||| ||||||||    
T  100227 agtttacagaagtgtaataaattgttgtctacaacctgaatgcatttctaacactaaaacaa-ggtttctacatactct-tccatccaaaa-tcaaagaa 100131  T
Q  111 ccaaaacctaa-cgcaaattcccaattttcatacagaactatgttaaac-caaaattagaatttcattctacattattgaaagtaaacctcacccttacc 208  Q
     || || |||| | ||||| ||||||||| |  |||||||||||||||| |||||| ||||||  | |||| | ||||||||||||||||||||||||||    
T  100130 tcagaaactaaacccaaatccccaatttttac-cagaactatgttaaactcaaaatcagaattataatctatactattgaaagtaaacctcacccttacc 100032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 80376 - 80307
Alignment:
Q  143 cagaactatgttaaac-caaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||||||||||| |||||| ||||||  | |||| | |||||||||||||||||||||||||||||    
T  80376 cagaactatgttaaactcaaaatcagaattataatctatactattgaaagtaaacctcacccttacctta 80307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 10060 - 10195
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| | |||||||||||| ||||||||  ||||||||  ||||||||||||||||||  ||||| | |||| |||| |||||| ||||||||    
T  10060 actccccaaatcaatttacagatgtgaaatgaaatactgtatgcactcagaacctatttctaacatcaaaac-agggttcctacactcaattcacccaaa 10158  T
Q  101 aatcaaagaa--ccaaaacctaacgcaaattcccaatt 136  Q
    |   ||||||  |||||||||||| | |||||||||||    
T  10159 atcaaaagaaatccaaaacctaactc-aattcccaatt 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41334 - 41395
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    |||||||||||||| |||||||| || ||||||| ||| |||||| |||||||| |||||||    
T  41334 actccccaaattagcttacagatatgcaatgaaaggttttatgcacccagaacccatttcta 41395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 201 - 92
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||||||||| ||||||||  ||||| ||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  201 actccccaaatcagtttacagatatgaaatgaaatgatgtatgcactcagaatctatttctaacatcaaaccagtgattactacactcaattcacccaaa 102  T
Q  101 aatcaaagaa 110  Q
    || |||||||    
T  101 aaccaaagaa 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3413 - 3304
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||  || |||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  3413 actccccaaattagtttacagatatgaaactaaatgttgtatgcactcaaaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 3314  T
Q  101 aatcaaagaa 110  Q
    || |||||||    
T  3313 aaccaaagaa 3304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 237 - 289
Alignment:
Q  256 tcttggtttttctccccaaaacttgtctgtacataaaagcagttctgacttctc 309  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  237 tcttggtttttctccc-aaaacttgtctgtacgtaaaagcagttctgacttctc 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12765 - 12692
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||  ||||||| ||||||||||  |||||||    
T  12765 actccccaaattagtttacagatatgaaatgaaaggttgtatgcactcagaacccatttctaacatcaaaacaa 12692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8626 - 8553
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||||||||||  ||  || |||||||||||||| ||||||||||||||||  |||||||    
T  8626 actccccaaattagtttacagatgtaaaactaagtgttgtatgcaacccgaacctatttctaacatcaaaacaa 8553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 152700 - 152627
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||| ||||||||||| || ||  |||||||||||||||||||||| |||||||||||  |||||||    
T  152700 actccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacatatttctaacatcaaaacaa 152627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2773 - 2709
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| ||||||||||||||||| ||||||||    
T  2773 actccccaaattagtttacagataagcaatgaagtgttctatgcaaccagaacctaattctaaca 2709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28067 - 28131
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||| |||| || ||  ||||||||||||||||||||||||||||||||||    
T  28067 actccccaaatcagtttatagatatgaaactaaatgttgtatgcaaccagaacctatttctaaca 28131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 147772 - 147836
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||||| ||||||||  ||||||||  ||||||||||||||||||    
T  147772 actccccaaatcagtttacagatgtgaaatgaaatactgtatgcactcagaacctatttctaaca 147836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 187185 - 187084
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||  | |||||   || |||| |||||| ||||||||    
T  187185 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaa 187086  T
Q  101 aa 102  Q
    ||    
T  187085 aa 187084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 196812 - 196711
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||  | |||||   || |||| |||||| ||||||||    
T  196812 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaa 196713  T
Q  101 aa 102  Q
    ||    
T  196712 aa 196711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 154959 - 155023
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||||||||| ||||||||  ||||| ||  ||||||||||||||||||    
T  154959 actccccaaatcagtttacagatgtgaaatgaaatactgtatccactcagaacctatttctaaca 155023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 173676 - 173608
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  173676 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 173608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 55933 - 55899
Alignment:
Q  193 aaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||||||||||||||||||| ||||    
T  55933 aaacctcacccttaccttaattcagatagacaaat 55899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 19153 - 19288
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||| ||||| |||||||||||||| ||||||||  ||||| ||  ||||||||||||||||||  ||||| | |||| |||| |||||| ||||| ||    
T  19153 actcctcaaatcagtttacagatgtgaaatgaaatactgtatacactcagaacctatttctaacatcaaaac-agggttcctacactcaattcaccc-aa 19250  T
Q  101 aatcaaagaa--ccaaaacctaacgcaaattcccaattt 137  Q
    ||||||||||  |||||| ||||| | ||||||||||||    
T  19251 aatcaaagaaatccaaaagctaactc-aattcccaattt 19288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 194 - 257
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||| ||| |||||| |||||||| |||||||||    
T  194 actccccaaattagtttacagatatgcaatgaaaggttttatgcacccagaacccatttctaac 257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11242 - 11306
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || ||||||||||||| |||||||| ||||||||    
T  11242 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaactagaacctaattctaaca 11306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1361 - 1434
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||| ||||||||||||||| ||||  ||  || || | ||||||||||||||||| ||||||||||| |||||    
T  1361 actctccaaattagtttacaaatgtaaaactaagtgctatatgcaaccagaacctaattctaacactagaacaa 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 5903 - 5972
Alignment:
Q  181 attattgaaagtaaacctcacccttaccttaattcagatagaaaaatctctacag-aatctggttctcttg 250  Q
    ||||||||| || | |||||||||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  5903 attattgaatgttagcctcacccttaccttaattcagat-gaaaaatccctacagaaatctggttctcttg 5972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 16578 - 16417
Alignment:
Q  50 gaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaac 148  Q
    |||| |||||||||||||||||||| | || |||| |||| |||  ||| || |  |||||  |||||||| || ||||||||||||||  |  ||||||    
T  16578 gaacatatttctaacactaaaacaatgattcctacactcattccgtccagaatttgaagaataaaaacctagacccaaattcccaatttctac-cagaac 16480  T
Q  149 tatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    ||  |||||||||||| ||||||  | || | | |||||||||||||||||||||||||||||    
T  16479 tagcttaaaccaaaataagaattaaaatccatactattgaaagtaaacctcacccttacctta 16417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 211
Target Start/End: Complemental strand, 56515 - 56354
Alignment:
Q  50 gaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaac 148  Q
    |||| ||||||||||| |||||||| |||| |||| |||| |||  ||| || || ||||| ||||||||| || ||||||||||| ||||   ||||||    
T  56515 gaacatatttctaacattaaaacaatggttcctacactcattccgtccagaattcgaagaatcaaaacctagacccaaattcccaa-tttctaccagaac 56417  T
Q  149 tatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    || ||||||||||||| | ||||  | || | | |||||||||||||| ||| ||||||||||    
T  56416 taggttaaaccaaaatcataattataatccatactattgaaagtaaacatcatccttacctta 56354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 211
Target Start/End: Original strand, 142118 - 142279
Alignment:
Q  50 gaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaatcaaagaaccaaaaccta-acgcaaattcccaattttcatacagaac 148  Q
    |||| ||||||||||| |||||||| |||| |||| |||| |||  ||| || || ||||| ||||||||| || ||||||||||| ||||   ||||||    
T  142118 gaacatatttctaacattaaaacaatggttcctacactcattccgtccagaattcgaagaatcaaaacctagacccaaattcccaa-tttctaccagaac 142216  T
Q  149 tatgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    || ||||||||||||| | ||||  | || | | |||||||||||||| ||| ||||||||||    
T  142217 taggttaaaccaaaatcataattataatccatactattgaaagtaaacatcatccttacctta 142279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2314 - 2241
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| |  ||  || || ||||||||||||||||||||||||||||  |||||||    
T  2314 actccccaaattagtttacagatataaaactaattgctgtatgcaaccagaacctatttctaacatcaaaacaa 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 5310 - 5465
Alignment:
Q  15 tttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctc-aatccacccaaaaatcaaagaacca 113  Q
    |||||| | ||||||||||||  ||||||||  | |||| || |||||||||||||||||||||||| || |||   |||| || |||||||||||| ||    
T  5310 tttacataagtgtaatgaaatactgtatgcagtctgaacataattctaacactaaaacaaaggtttccacactcttttccatcc-aaaatcaaagaatca 5408  T
Q  114 aaacctaacgcaaattcccaattttcatacagaactatgttaaa-ccaaaattagaat 170  Q
     || ||||| ||||||||||||||| |  |||||||||| |||| ||||||| |||||    
T  5409 taatctaacccaaattcccaatttt-aaccagaactatgctaaatccaaaatcagaat 5465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8075 - 8148
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||  ||||||| |||| |||||  |||||||    
T  8075 actccccaaattagtttacagatatgaaatgaaaggttgtatgcactcagaacccatttataacatcaaaacaa 8148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28670 - 28743
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    ||||||||||| |||||||| || || ||  ||||| ||||||||||||||||||||||||||||  |||||||    
T  28670 actccccaaatcagtttacaaatatgaaactaaatgatgtatgcaaccagaacctatttctaacatcaaaacaa 28743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 22119 - 22022
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaa 102  Q
    ||||||| ||||||||||| || |||||||| |||||||||   |||||||||||||||||  ||| ||  | || ||||||||||| ||||||||||    
T  22119 cccaaatcagtttacagatatgaaatgaaatattgtatgcactaagaacctatttctaacatcaaaccagtgattcctaccctcaattcacccaaaaa 22022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 26316 - 26219
Alignment:
Q  5 cccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaa 102  Q
    ||||||| ||||||||||| || |||||||| |||||||||   |||||||||||||||||  ||| ||  | || ||||||||||| ||||||||||    
T  26316 cccaaatcagtttacagatatgaaatgaaatattgtatgcactaagaacctatttctaacatcaaaccagtgattcctaccctcaattcacccaaaaa 26219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 21935 - 21905
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||    
T  21935 aagtaaacctcacccttaccttaattcagat 21905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 26132 - 26102
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||    
T  26132 aagtaaacctcacccttaccttaattcagat 26102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 13636 - 13737
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||| | ||||||||||| || ||||||||| ||||||||  ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||    
T  13636 actccccaactcagtttacagatatgaaatgaaatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaa 13735  T
Q  101 aa 102  Q
    ||    
T  13736 aa 13737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 207081 - 206980
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    ||||||||||| ||||||||||| || ||  ||||| |||||||||||| |||||||||| |||| |||||||    || |||| |||||| ||||||||    
T  207081 actccccaaatcagtttacagatatgaaactaaatgatgtatgcaaccaaaacctatttcgaacattaaaacagtaattcctacactcaattcacccaaa 206982  T
Q  101 aa 102  Q
    ||    
T  206981 aa 206980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 96675 - 96776
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  ||||||||||| ||||||  | |||||   || ||||||||||| ||||||||    
T  96675 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcagaacctattactaacatcagaacaacaattcctaccctcaattcacccaaa 96774  T
Q  101 aa 102  Q
    ||    
T  96775 aa 96776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 449018 - 448954
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||  ||||||||||||||||||    
T  449018 actccccaaatcagtttacagatatgaaactaaatgttgtatgcattcagaacctatttctaaca 448954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 179781 - 179845
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || |||||| | ||||||||||||| ||||||||    
T  179781 actccccaaattagtttacagatgcaaaactaagtgttgtctacaaccagaacctaattctaaca 179845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 511953 - 511889
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||||||   || ||||||||||||||| | ||||||||    
T  511953 actccccaaattagtttacagatgaaaaatgaatgtttctatgcaaccagaacccaattctaaca 511889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3068 - 3132
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||  ||||||||||||||  ||||||||||||||||||    
T  3068 actccccaaatcagtttacagatatgaaactaaatgttgtatgcattcagaacctatttctaaca 3132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19489 - 19425
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  | |||||| |||| |||||| |||||||||| ||||||||    
T  19489 actccccaaattagtttacagataagcaatgaagtgttctatgcatccagaacctaattctaaca 19425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 37103 - 37139
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  37103 tattgaaagtaaacctcacccttaccttaattcagat 37139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 39463 - 39531
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  39463 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 39531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 29489 - 29545
Alignment:
Q  162 aattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||| || |||| | ||||||||||||| |||||||||||||||||||||||    
T  29489 aattagaatt-caatctatactattgaaagtaaatctcacccttaccttaattcagat 29545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 46109 - 46045
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||| ||| ||||||    || |||||||||||||||    
T  46109 actccccaaattagtttacagatatgaaatgagatgatgtatgtcctcataacctatttctaaca 46045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50382 - 50318
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||| || ||||| ||| ||||||    || |||||||||||||||    
T  50382 actccccaaattagtttacagatatgaaatgagatgatgtatgtcctcataacctatttctaaca 50318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20397 - 20461
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  |||||||| |||| ||| ||||||||| ||| ||||||||    
T  20397 actccccaaattagtttacagataagtaatgaagtgttctatacaaccagaatctaattctaaca 20461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23187 - 23123
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||||||  |||||||| |||| ||| ||||||||| ||| ||||||||    
T  23187 actccccaaattagtttacagataagtaatgaagtgttctatacaaccagaatctaattctaaca 23123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 29260 - 29192
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  29260 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 29192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 34661 - 34593
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||| ||||||||||||||| ||||||    
T  34661 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaatctcacccttaccttagttcaga 34593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 1237 - 1201
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcagat 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  1237 tattgaaagtaaacctcacccttaccttaattcagat 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 171161 - 171097
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||| || |||| ||||||||||||||||| ||||||||    
T  171161 actccccaaattagtttacagatgctaaattaagtgttatatgcaaccagaacctaattctaaca 171097  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 371204 - 371268
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||| ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  371204 actccccaaattggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 371268  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48532 - 48469
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    ||||||||||||||||||||||| || ||||||||| ||||  ||  |||||||||||||||||    
T  48532 actccccaaattagtttacagatatgaaatgaaatgctgtacacactcagaacctatttctaac 48469  T

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Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43466 - 43403
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaac 64  Q
    |||||||||||||||||||| || || ||||||||| ||||  ||  |||||||||||||||||    
T  43466 actccccaaattagtttacatatatgaaatgaaatgctgtacacactcagaacctatttctaac 43403  T

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Target: scaffold0947 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 3555 - 3497
Alignment:
Q  7 caaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  3555 caaattagtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 3497  T

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Target: scaffold0555 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 2215 - 2304
Alignment:
Q  13 agtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaa 102  Q
    ||||||||||| || |||||||||||| |||||  ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||||    
T  2215 agtttacagatatgaaatgaaatgttgcatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaa 2304  T

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Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7746 - 7847
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaa 100  Q
    |||||||||||| ||||| ||||||||||| |  |||||||||||  || |||||||||||||||  | |||||   || |||| |||||| ||||||||    
T  7746 actccccaaattggtttatagatgtgtaataacttgttgtatgcactcaaaacctatttctaacatcagaacaacaattcctacactcaattcacccaaa 7845  T
Q  101 aa 102  Q
    ||    
T  7846 aa 7847  T

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Target: scaffold0114 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47210 - 47137
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||||||||||| ||| |  || ||||||||  || ||||||||||||||| || |||||    
T  47210 actccccaaattagtttacagatgtgaaataacttgctgtatgcactcataacctatttctaacattagaacaa 47137  T

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Target: scaffold0114; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42748 - 42812
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||| ||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  42748 actccacaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 42812  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 21005 - 21062
Alignment:
Q  8 aaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||||||||| || ||||||| ||||||||||  ||||||| ||||||||||    
T  21005 aaattagtttacagatatgaaatgaaaggttgtatgcactcagaacccatttctaaca 21062  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14843 - 14904
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttcta 62  Q
    ||||||||||||||||||||||| || ||||||| ||| ||||||  ||||||| |||||||    
T  14843 actccccaaattagtttacagatatgcaatgaaaggttatatgcactcagaacccatttcta 14904  T

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Target: scaffold0063; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25044 - 25109
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacac 66  Q
    ||||||||||||||||||||||| || ||||| | ||| ||||||  ||||||| |||||||||||    
T  25044 actccccaaattagtttacagatatgcaatgataggttatatgcactcagaacccatttctaacac 25109  T

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Target: scaffold0664 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2957 - 3029
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    |||||||||||||||||||||||||| ||||||||| |||   ||  ||||||| ||||||||| | ||||||    
T  2957 actccccaaattagtttacagatgtgaaatgaaatgctgttcacactcagaacccatttctaaccccaaaaca 3029  T

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Target: scaffold0518 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8301 - 8365
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  8301 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 8365  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1354 - 1282
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    ||||||||||||||||||||| | || ||||||||| ||||  ||  ||||||| ||||||||| ||||||||    
T  1354 actccccaaattagtttacagttatgaaatgaaatgatgtacacactcagaacccatttctaactctaaaaca 1282  T

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Target: scaffold0331 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19325 - 19389
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||| ||||||||||||||   ||  || |||||||||||||||||||||| ||||||||    
T  19325 actccccaatttagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaaca 19389  T

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Target: scaffold0243 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11683 - 11611
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    ||||||||||||||||||||||| || ||||||||| |||   ||  ||||||||||||||||| | ||||||    
T  11683 actccccaaattagtttacagatatgaaatgaaatgctgttcacactcagaacctatttctaaccccaaaaca 11611  T

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Target: scaffold0239 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13839 - 13775
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  13839 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 13775  T

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Target: scaffold0173 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2120 - 2184
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || ||||||||||||| |||||||| ||||||||    
T  2120 actccccaaattagtttacagatgcaaaactaagtgttgtatgcaactagaacctaattctaaca 2184  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45019 - 45091
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaaca 73  Q
    |||||||||||||||||||||||||| ||||||||| |||   ||  ||||||| ||||||||| | ||||||    
T  45019 actccccaaattagtttacagatgtgaaatgaaatgctgttcacactcagaacccatttctaaccccaaaaca 45091  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16786 - 16722
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||  || || ||||||||||||||||||| ||||||||    
T  16786 actccccaaattagtttacagatgcaaaactaagtgatgtatgcaaccagaacctaattctaaca 16722  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38018 - 37954
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||| | ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  38018 actccccaaaatggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 37954  T

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Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 136078 - 136014
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    |||||||||| | ||||||||||||| ||| |  |||||||||||  ||||||||||||||||||    
T  136078 actccccaaaatggtttacagatgtgaaataacttgttgtatgcactcagaacctatttctaaca 136014  T

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Target: scaffold0523 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 227
Target Start/End: Complemental strand, 6921 - 6871
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||| ||||||| ||||||||||||||||||||||||||||  |||||||    
T  6921 tctacactattgaa-gtaaacctcacccttaccttaattcagaatgaaaaat 6871  T

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Target: scaffold0402 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 15759 - 15854
Alignment:
Q  7 caaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaaaggtttctaccctcaatccacccaaaaa 102  Q
    ||||| ||||||||||| ||  ||| |||||||||||||  ||||||||||||||||||  ||| ||  | || |||| |||||| ||||||||||    
T  15759 caaatcagtttacagatatgagatggaatgttgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaa 15854  T

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Target: scaffold0371 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 6193 - 6138
Alignment:
Q  159 caaaattagaatttcattctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    ||||||||||| || | |||| | |||||| |||||||||||||||||||||||||    
T  6193 caaaattagaactttaatctatactattgagagtaaacctcacccttaccttaatt 6138  T

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Target: scaffold0335 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 7696 - 7661
Alignment:
Q  183 tattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||| |||||||||||||||||||||||||||||    
T  7696 tattgagagtaaacctcacccttaccttaattcaga 7661  T

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Target: scaffold0309 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 9174 - 9228
Alignment:
Q  196 cctcacccttaccttaattcagatagaaaaatctctacag-aatctggttctcttg 250  Q
    |||||||||||||||||||||||| |||||||| |||| | |||||||||||||||    
T  9174 cctcacccttaccttaattcagat-gaaaaatccctacggaaatctggttctcttg 9228  T

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Target: scaffold0562 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 2903 - 2865
Alignment:
Q  176 tctacattattgaaagtaaacctcacccttaccttaatt 214  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  2903 tctacactattgagagtaaacctcacccttaccttaatt 2865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 211 - 181
Alignment:
Q  188 aaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||||||||||||||||||||||||||    
T  211 aaagtaaacctcacccttaccttaattcaga 181  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 17610 - 17573
Alignment:
Q  189 aagtaaacctcacccttaccttaattcagatagaaaaat 227  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17610 aagtaaacctcacccttaccttaattcaga-agaaaaat 17573  T

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Target: scaffold1584 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1148 - 1221
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaaaacaa 74  Q
    |||||||||||||||||| ||||  | ||||||| | ||||||||  ||||||| ||||||||||  |||||||    
T  1148 actccccaaattagtttatagatacgaaatgaaaggctgtatgcactcagaacccatttctaacatcaaaacaa 1221  T

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Target: scaffold0546 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 9907 - 9846
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||||  |||||||||||||    
T  9907 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacagcacccttacctta 9846  T

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Target: scaffold0222 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 4248 - 4179
Alignment:
Q  143 cagaactatgttaaaccaaaatt-agaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||||||||| | ||||||  | || | | |||||||||||||||||||||||||||||    
T  4248 cagaactaggttaaaccaaaaatcagaattaaaatccatactattgaaagtaaacctcacccttacctta 4179  T

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Target: scaffold0109 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 3400 - 3461
Alignment:
Q  150 atgttaaaccaaaattagaatttcattctacattattgaaagtaaacctcacccttacctta 211  Q
    |||||||| |||||| |||||| || |||| | ||||||||||||||  |||||||||||||    
T  3400 atgttaaatcaaaatcagaattacaatctatactattgaaagtaaacagcacccttacctta 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 218
Target Start/End: Original strand, 32541 - 32570
Alignment:
Q  189 aagtaaacctcacccttaccttaattcaga 218  Q
    ||||||||||||||||||||||||||||||    
T  32541 aagtaaacctcacccttaccttaattcaga 32570  T

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Target: scaffold1336 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1336
Description:

Target: scaffold1336; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 105 - 37
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaa 69  Q
    ||||||||||  |||||||||| ||||||| || | |||| | ||||| |||| |||||||||||||||    
T  105 actccccaaaacagtttacagaagtgtaataaagttttgtctacaacctgaacatatttctaacactaa 37  T

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Target: scaffold0751 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 1372 - 1439
Alignment:
Q  151 tgttaaaccaaaattagaatttcatt-ctacattattgaaagtaaacctcacccttaccttaattcaga 218  Q
    |||||||||||||| ||||||  ||  ||||| ||||||| | ||||||||||||||||||||||||||    
T  1372 tgttaaaccaaaatcagaattcaataactacactattgaa-gcaaacctcacccttaccttaattcaga 1439  T

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Target: scaffold0430 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13914 - 13847
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaacactaa 69  Q
    ||||||||||| | ||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||||||    
T  13914 actccccaaatca-tttacagatatgcaatgaaaggttatatgcactcagaacccatttctaacactaa 13847  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15224 - 15288
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| | ||||||||| || ||||||| ||| ||||||  ||||||| ||||||||||    
T  15224 actccccaaatcaatttacagatatgcaatgaaaggttatatgcactcagaacccatttctaaca 15288  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14309 - 14245
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| |||||||| ||||  ||  ||||| |||||||||  |||||||||||||||||    
T  14309 actccccaaatcagtttacaaatgtaaaactaaatgctgtatgcaatgagaacctatttctaaca 14245  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7955 - 8019
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||||||||||||||||   ||||||   || ||||||||||||||| | ||||||||    
T  7955 actccccaaattagtttacagatgaaaaatgaatgtttctatgcaaccagaacccaattctaaca 8019  T

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Target: scaffold0101 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6123 - 6059
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  || |||| ||||||||||    
T  6123 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcataacccatttctaaca 6059  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50312 - 50248
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||| || ||||||| ||| ||||||  ||||| | ||||||||||    
T  50312 actccccaaatcagtttacagatatgcaatgaaaggttatatgcactcagaatccatttctaaca 50248  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 321892 - 321956
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||||   ||  || || ||||||||||||||||||| ||||||||    
T  321892 actccccaaatcagtttacagatgctaaactaagtgctgtatgcaaccagaacctaattctaaca 321956  T

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Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 327580 - 327644
Alignment:
Q  1 actccccaaattagtttacagatgtgtaatgaaatgttgtatgcaaccagaacctatttctaaca 65  Q
    ||||||||||| ||||||||||||   ||  || || ||||||||||||||||||| ||||||||    
T  327580 actccccaaatcagtttacagatgctaaactaagtgctgtatgcaaccagaacctaattctaaca 327644  T

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