View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6860_high_74 (Length: 223)

Name: NF6860_high_74
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6860_high_74
NF6860_high_74
[»] chr7 (24 HSPs)
chr7 (90-218)||(767292-767421)
chr7 (1-87)||(16933220-16933306)
chr7 (1-87)||(16938603-16938689)
chr7 (1-87)||(763701-763787)
chr7 (1-87)||(30884198-30884284)
chr7 (1-87)||(31660073-31660159)
chr7 (1-87)||(46358524-46358610)
chr7 (2-87)||(20000651-20000736)
chr7 (1-87)||(47340150-47340237)
chr7 (1-87)||(41911088-41911171)
chr7 (1-76)||(35736963-35737038)
chr7 (23-89)||(34875491-34875557)
chr7 (23-87)||(11732645-11732709)
chr7 (25-87)||(5757390-5757452)
chr7 (30-87)||(24359875-24359932)
chr7 (23-87)||(44141249-44141313)
chr7 (23-77)||(39007647-39007701)
chr7 (23-87)||(15974934-15974997)
chr7 (25-64)||(46024053-46024092)
chr7 (25-87)||(30428877-30428938)
chr7 (23-87)||(25778841-25778904)
chr7 (34-87)||(6797394-6797447)
chr7 (25-74)||(27335629-27335677)
chr7 (28-64)||(48690921-48690957)
[»] chr6 (18 HSPs)
chr6 (1-87)||(1449546-1449632)
chr6 (1-87)||(31216666-31216752)
chr6 (1-89)||(6900805-6900893)
chr6 (1-87)||(1536872-1536958)
chr6 (1-87)||(7089086-7089172)
chr6 (1-87)||(15493178-15493264)
chr6 (10-87)||(34870071-34870148)
chr6 (30-87)||(30908656-30908713)
chr6 (33-87)||(7764445-7764499)
chr6 (25-87)||(35119243-35119300)
chr6 (28-87)||(33346374-33346432)
chr6 (23-77)||(4338618-4338672)
chr6 (23-77)||(16968021-16968075)
chr6 (25-87)||(18611192-18611254)
chr6 (34-86)||(27079939-27079991)
chr6 (32-87)||(12394387-12394441)
chr6 (25-60)||(24737691-24737726)
chr6 (25-64)||(29157252-29157291)
[»] chr3 (38 HSPs)
chr3 (90-218)||(14746652-14746794)
chr3 (1-87)||(26662514-26662600)
chr3 (1-87)||(9106271-9106357)
chr3 (1-87)||(9595956-9596042)
chr3 (2-87)||(3475384-3475469)
chr3 (95-218)||(35982656-35982779)
chr3 (1-87)||(2941902-2941988)
chr3 (1-87)||(19284675-19284761)
chr3 (1-87)||(30947887-30947973)
chr3 (1-87)||(33413989-33414075)
chr3 (1-87)||(46237734-46237820)
chr3 (1-87)||(54379167-54379253)
chr3 (2-87)||(47335036-47335121)
chr3 (1-87)||(6097660-6097746)
chr3 (1-87)||(10986356-10986442)
chr3 (1-87)||(26960630-26960716)
chr3 (30-87)||(51846785-51846842)
chr3 (23-89)||(53594970-53595036)
chr3 (30-87)||(34563352-34563409)
chr3 (30-87)||(41192355-41192412)
chr3 (22-87)||(51681999-51682064)
chr3 (23-87)||(19385313-19385376)
chr3 (23-87)||(47728392-47728456)
chr3 (23-87)||(51362436-51362499)
chr3 (32-87)||(23755289-23755344)
chr3 (25-64)||(50754032-50754071)
chr3 (25-64)||(52987650-52987689)
chr3 (25-87)||(7045300-7045361)
chr3 (28-89)||(16277417-16277477)
chr3 (34-87)||(32232995-32233048)
chr3 (23-88)||(37319458-37319523)
chr3 (25-77)||(28299952-28300004)
chr3 (28-87)||(23699331-23699390)
chr3 (28-87)||(23717786-23717845)
chr3 (28-87)||(23736242-23736301)
chr3 (25-87)||(8718105-8718166)
chr3 (25-87)||(9069992-9070053)
chr3 (25-67)||(39099220-39099262)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-87)||(33688-33774)
[»] chr8 (35 HSPs)
chr8 (1-87)||(19784275-19784361)
chr8 (1-87)||(30413918-30414004)
chr8 (1-87)||(41099186-41099272)
chr8 (1-87)||(41451109-41451195)
chr8 (1-87)||(10237358-10237444)
chr8 (1-87)||(15227034-15227120)
chr8 (1-87)||(34633297-34633383)
chr8 (1-87)||(43690644-43690730)
chr8 (1-87)||(1149999-1150085)
chr8 (1-87)||(7857684-7857770)
chr8 (30-87)||(9852274-9852331)
chr8 (30-87)||(34648133-34648190)
chr8 (30-84)||(23396484-23396538)
chr8 (28-87)||(15260854-15260913)
chr8 (23-89)||(13526669-13526735)
chr8 (23-89)||(13616204-13616270)
chr8 (30-87)||(35302591-35302648)
chr8 (42-87)||(40023279-40023324)
chr8 (28-89)||(40247288-40247349)
chr8 (25-87)||(32987445-32987506)
chr8 (25-65)||(8550529-8550569)
chr8 (23-87)||(42433705-42433768)
chr8 (41-88)||(10443586-10443633)
chr8 (23-89)||(28698578-28698645)
chr8 (25-87)||(39021979-39022040)
chr8 (34-87)||(2522871-2522924)
chr8 (25-62)||(4836701-4836738)
chr8 (25-62)||(4842146-4842183)
chr8 (25-64)||(7614094-7614133)
chr8 (25-76)||(12355437-12355488)
chr8 (25-87)||(1208713-1208774)
chr8 (29-87)||(7058118-7058175)
chr8 (31-77)||(30651963-30652009)
chr8 (29-87)||(40012186-40012243)
chr8 (25-66)||(15181815-15181856)
[»] chr4 (36 HSPs)
chr4 (1-87)||(1621879-1621965)
chr4 (1-87)||(11785978-11786064)
chr4 (1-87)||(11798145-11798231)
chr4 (1-87)||(13635701-13635787)
chr4 (1-87)||(49492488-49492574)
chr4 (1-87)||(51921241-51921327)
chr4 (2-87)||(15051113-15051198)
chr4 (2-87)||(30597703-30597788)
chr4 (2-87)||(55765485-55765570)
chr4 (3-87)||(27865715-27865799)
chr4 (3-87)||(36011847-36011931)
chr4 (1-87)||(49426033-49426119)
chr4 (3-87)||(46672443-46672527)
chr4 (1-87)||(53441324-53441410)
chr4 (3-87)||(35291526-35291610)
chr4 (19-87)||(10472501-10472569)
chr4 (12-87)||(26578176-26578251)
chr4 (12-87)||(38244948-38245023)
chr4 (25-87)||(1729615-1729677)
chr4 (34-87)||(20861584-20861637)
chr4 (30-87)||(30357811-30357868)
chr4 (30-87)||(38010145-38010202)
chr4 (23-87)||(25574126-25574190)
chr4 (23-88)||(16298924-16298989)
chr4 (25-89)||(36621701-36621764)
chr4 (45-84)||(805109-805148)
chr4 (29-87)||(24686576-24686634)
chr4 (23-87)||(22181243-22181306)
chr4 (23-87)||(50643747-50643810)
chr4 (25-64)||(4168384-4168423)
chr4 (25-64)||(26447412-26447451)
chr4 (25-87)||(27764244-27764305)
chr4 (25-87)||(45255979-45256040)
chr4 (23-64)||(29826604-29826645)
chr4 (25-61)||(637883-637919)
chr4 (25-61)||(38485674-38485710)
[»] chr5 (19 HSPs)
chr5 (1-87)||(26637813-26637899)
chr5 (1-87)||(14940332-14940418)
chr5 (1-87)||(15416668-15416754)
chr5 (2-87)||(13552987-13553072)
chr5 (3-87)||(37456684-37456768)
chr5 (1-87)||(3884011-3884097)
chr5 (1-87)||(14394472-14394558)
chr5 (10-87)||(30783439-30783516)
chr5 (25-87)||(16668794-16668856)
chr5 (23-87)||(16552637-16552701)
chr5 (23-87)||(33868159-33868223)
chr5 (25-87)||(13362774-13362835)
chr5 (25-87)||(25017217-25017278)
chr5 (26-86)||(4674965-4675025)
chr5 (25-87)||(18465556-18465618)
chr5 (25-87)||(28070153-28070214)
chr5 (25-87)||(34329131-34329192)
chr5 (25-64)||(42512225-42512264)
chr5 (25-87)||(23335707-23335768)
[»] chr1 (34 HSPs)
chr1 (1-87)||(25889004-25889090)
chr1 (2-87)||(20434699-20434784)
chr1 (2-87)||(49936914-49936999)
chr1 (1-87)||(24635930-24636016)
chr1 (1-87)||(50351807-50351893)
chr1 (4-87)||(6314119-6314202)
chr1 (1-87)||(43452546-43452632)
chr1 (1-87)||(48762307-48762393)
chr1 (2-87)||(19897737-19897822)
chr1 (3-87)||(18618839-18618923)
chr1 (4-87)||(16975958-16976041)
chr1 (3-87)||(28375468-28375552)
chr1 (12-87)||(4097895-4097970)
chr1 (12-87)||(23175509-23175584)
chr1 (12-83)||(34369668-34369739)
chr1 (14-87)||(11421598-11421671)
chr1 (30-87)||(21256777-21256834)
chr1 (23-88)||(31529663-31529728)
chr1 (23-89)||(33097407-33097473)
chr1 (26-89)||(51801734-51801797)
chr1 (25-87)||(37639345-37639407)
chr1 (23-89)||(44260520-44260586)
chr1 (23-89)||(44688608-44688674)
chr1 (30-87)||(31083366-31083423)
chr1 (45-84)||(37228364-37228403)
chr1 (25-87)||(18056788-18056849)
chr1 (25-87)||(35198181-35198243)
chr1 (30-87)||(20507286-20507343)
chr1 (45-84)||(41033946-41033985)
chr1 (28-64)||(16115877-16115913)
chr1 (28-87)||(22348043-22348101)
chr1 (41-87)||(13590471-13590517)
chr1 (30-87)||(41033266-41033322)
chr1 (23-87)||(28323330-28323394)
[»] chr2 (27 HSPs)
chr2 (2-87)||(8149835-8149920)
chr2 (2-87)||(8154459-8154544)
chr2 (1-87)||(7487230-7487316)
chr2 (1-87)||(15016542-15016628)
chr2 (3-87)||(39355039-39355123)
chr2 (1-87)||(9143589-9143675)
chr2 (1-87)||(34464715-34464801)
chr2 (1-87)||(1292155-1292241)
chr2 (12-87)||(2263577-2263652)
chr2 (30-87)||(18762871-18762928)
chr2 (30-87)||(41346045-41346102)
chr2 (23-87)||(5098720-5098784)
chr2 (45-84)||(21155441-21155480)
chr2 (45-84)||(27974291-27974330)
chr2 (45-84)||(28060820-28060859)
chr2 (25-87)||(18298111-18298172)
chr2 (23-89)||(39548044-39548110)
chr2 (23-87)||(25995290-25995354)
chr2 (31-86)||(40853685-40853740)
chr2 (23-89)||(13081858-13081924)
chr2 (23-77)||(16142073-16142127)
chr2 (25-87)||(20709778-20709839)
chr2 (25-87)||(25192896-25192957)
chr2 (23-87)||(36636935-36636999)
chr2 (25-87)||(4281788-4281850)
chr2 (25-87)||(14551319-14551379)
chr2 (34-86)||(24024633-24024685)
[»] scaffold0581 (1 HSPs)
scaffold0581 (3-87)||(8399-8483)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-87)||(24278-24364)
[»] scaffold0571 (1 HSPs)
scaffold0571 (10-87)||(661-738)
[»] scaffold0238 (1 HSPs)
scaffold0238 (23-87)||(25230-25293)
[»] scaffold0544 (1 HSPs)
scaffold0544 (25-87)||(10675-10736)
[»] scaffold0097 (1 HSPs)
scaffold0097 (25-87)||(13617-13678)
[»] scaffold0460 (1 HSPs)
scaffold0460 (34-77)||(1618-1661)
[»] scaffold0558 (2 HSPs)
scaffold0558 (29-87)||(2451-2508)
scaffold0558 (29-87)||(5863-5920)
[»] scaffold0337 (1 HSPs)
scaffold0337 (25-87)||(7021-7082)
[»] scaffold0006 (1 HSPs)
scaffold0006 (34-87)||(209330-209383)
[»] scaffold0189 (1 HSPs)
scaffold0189 (23-87)||(11188-11251)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 767292 - 767421
Alignment:
Q  90 atgtacttacaccatgaaactatctgcagaatgtgaaggaaacaaa-ttacccttgctcataaaggaaacaatgtatatgcagaatgtttaacgcccaca 188  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  767292 atgtatttacaccatgaaattatctgcagaatgtgaagaaaacaaaattacccttgctcataatggaaacaatgtatatgcagaatgtttaacgcccaca 767391  T
Q  189 cgtaaatgaatttattcatttaatcatatt 218  Q
    ||||||||||| |||| |||||||||||||    
T  767392 cgtaaatgaatctatttatttaatcatatt 767421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16933220 - 16933306
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16933220 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 16933306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16938603 - 16938689
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16938603 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 16938689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 763787 - 763701
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  763787 ccatttatgttcaaaataaaagaaatctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 763701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 30884198 - 30884284
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  30884198 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 30884284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31660159 - 31660073
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  31660159 ccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 31660073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 46358610 - 46358524
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  46358610 ccatttttgttcaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 46358524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 20000651 - 20000736
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  20000651 catttttgttcaaagtgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataacttt 20000736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 47340237 - 47340150
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtg-tttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||    
T  47340237 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgttttatgcacggtgcataagaaaataacttatgcaccataacttt 47340150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 41911088 - 41911171
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  41911088 ccatttttgttcaaaataaaa---atctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 41911171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35737038 - 35736963
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgc 76  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35737038 ccatttttgttcaaaataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgc 35736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 34875557 - 34875491
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  34875557 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatggcttatgcataataactttgc 34875491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 11732645 - 11732709
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  11732645 aaatctaatggttgtgaagtgtttatgcacagtgcataagaaaatggcttatgcaccataacttt 11732709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 5757452 - 5757390
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||    
T  5757452 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttatgcataataacttt 5757390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 24359932 - 24359875
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataacttt 24359875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 44141249 - 44141313
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  44141249 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcatgataacttt 44141313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 39007647 - 39007701
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  39007647 aaatatgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 39007701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 15974934 - 15974997
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| |||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  15974934 aaatatgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 15974997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 46024092 - 46024053
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  46024092 atctgatggttgtgaagtgtttatgcacggtgcataagga 46024053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 30428938 - 30428877
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||  |||||||||||||||||||||| | |  ||||||||||||||||||    
T  30428938 atctgatggttgtgaaatgtttatgcacggtgcataagg-atttccttatgcaccataacttt 30428877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 25778904 - 25778841
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||| |  ||||||||||||||||||    
T  25778904 aaatctgatggttgtgaagtgcttatgcacagtgcataa-gaattttcttatgcaccataacttt 25778841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 6797394 - 6797447
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||||||||||| | |||||||||||||| ||||||||  ||||||||    
T  6797394 ttgtgaagtgtttatgcaggatgcataaggaaatgacttatgcataataacttt 6797447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 27335629 - 27335677
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttat 74  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| |||||    
T  27335629 atctgatggttgtgaagtgtttatgca-ggtgcataagaaaatgacttat 27335677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 48690957 - 48690921
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||  |||||||||||||||||||||||    
T  48690957 tgatggttgtgaactgtttatgcacggtgcataagga 48690921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 7e-42; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1449632 - 1449546
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1449632 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 1449546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 31216752 - 31216666
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31216752 ccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 31216666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6900893 - 6900805
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  6900893 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataactttgc 6900805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1536872 - 1536958
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  1536872 ccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 1536958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7089172 - 7089086
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  7089172 ccatttttgttcaaaataaaagaaatctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 7089086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15493264 - 15493178
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15493264 ccatttttgttcaaaataaaagaaatctaatggttatgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttt 15493178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 34870071 - 34870148
Alignment:
Q  10 ttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  34870071 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataacttt 34870148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 30908713 - 30908656
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 30908656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 7764499 - 7764445
Alignment:
Q  33 gttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  7764499 gttgtgaagtgtttatacacggcgcataagaaaatggcttatgcaccataacttt 7764445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 35119300 - 35119243
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||    
T  35119300 atctgatggttgtgaagtgtttatgcacggtgcataagga-----cttatgcaccataacttt 35119243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 33346374 - 33346432
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  33346374 tgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 33346432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 4338618 - 4338672
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    |||||||||| || ||| ||||||||||| |||||||||| ||||||||||||||    
T  4338618 aaatctgatgattttgaagtgtttatgcagggtgcataagaaaatggcttatgca 4338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 16968021 - 16968075
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    |||| |||||||| ||| ||||||||||| |||||||||| ||||||||||||||    
T  16968021 aaatttgatggttatgaagtgtttatgcagggtgcataagaaaatggcttatgca 16968075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 18611254 - 18611192
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||  |||||||| |||||| ||||||||  ||||||||    
T  18611254 atctgatggttgtgaagtgtttatgcagagtgcataaagaaatgtcttatgcataataacttt 18611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 27079939 - 27079991
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 86  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||  |||||||    
T  27079939 ttgtgaagtgtttatgcacggtgcataagaaaatgacttatgcataataactt 27079991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 12394387 - 12394441
Alignment:
Q  32 ggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 12394441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 24737691 - 24737726
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcata 60  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24737691 atctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 29157291 - 29157252
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29157291 atctgatggttgtaaagtgtttatgcacggtgcataagga 29157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 14746794 - 14746652
Alignment:
Q  90 atgtacttacaccatgaaactatctgcagaatgtgaaggaaac-aaattacccttgctcataaaggaaac-------------aatgtatatgcagaatg 175  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||             |||||||||||||||||    
T  14746794 atgtacttacaccatgaaactatctgcagaatgtgaaggaaacaaaattacccttgctcgtaaaggaaacaatgtatatgaaaaatgtatatgcagaatg 14746695  T
Q  176 tttaacgcccacacgtaaatgaatttattcatttaatcatatt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14746694 tttaacgcccacacgtaaatgaatttattcatttaatcatatt 14746652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26662514 - 26662600
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26662514 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataacttt 26662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9106357 - 9106271
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9106357 ccatttttgttcaaaatgaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 9106271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9595956 - 9596042
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9595956 ccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 9596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 3475384 - 3475469
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  3475384 catttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 3475469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 35982656 - 35982779
Alignment:
Q  95 cttacaccatgaaactatctgcagaatgtgaaggaaac-aaattacccttgctcataaaggaaacaatgtatatgcagaatgtttaacgcccacacgtaa 193  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  35982656 cttacaccatgaaactatctgcagaatgt-aaggaaacaaaattacaattgctcataaaggaaacaatgtatatgca-aatgtttaacgtccacacgtaa 35982753  T
Q  194 atgaattta-ttcatttaatcatatt 218  Q
    |||||| || || |||||||||||||    
T  35982754 atgaatctattttatttaatcatatt 35982779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2941902 - 2941988
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  2941902 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttt 2941988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19284761 - 19284675
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  19284761 ccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 19284675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 30947887 - 30947973
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30947887 ccatttttgttcaaaatgaaagaaatttgatgattgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 30947973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33413989 - 33414075
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33413989 ccatttttatttaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 33414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 46237734 - 46237820
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  46237734 ccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 46237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 54379253 - 54379167
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  54379253 ccatttttgttcaaaataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 54379167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 47335121 - 47335036
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  47335121 catttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 47335036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6097660 - 6097746
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  6097660 ccatttttgttcaaaataaaagaaatctgatagttatgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 6097746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10986442 - 10986356
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||| || |||||||||    
T  10986442 ccatttttgtttaaaataaaagaaatctgatggttatgatgtgtttatgcacggtgcataaggaaataacttatacatcataacttt 10986356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26960716 - 26960630
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  26960716 ccatttttgttcaaaataaaagaaacctgatgattgtaatgtgtttatgcacggtgcataaggaaataacttatacaccataacttt 26960630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 51846785 - 51846842
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 51846842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 53595036 - 53594970
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||  ||||||||||    
T  53595036 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatggcttatgcataataactttgc 53594970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 34563352 - 34563409
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  34563352 atggttgtgaaatgtttatgcacggtgcataagaaaatggcttatgcaccataacttt 34563409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 41192355 - 41192412
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataacttt 41192412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 51681999 - 51682064
Alignment:
Q  22 gaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  51681999 gaaatctgatggttgcgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 51682064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 19385313 - 19385376
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  19385313 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 19385376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 47728456 - 47728392
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||    
T  47728456 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttt 47728392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 51362436 - 51362499
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  51362436 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 51362499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 23755344 - 23755289
Alignment:
Q  32 ggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  23755344 ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 23755289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 50754071 - 50754032
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  50754071 atctgatggttgtgaagtgtttatgcacggtgcataagga 50754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 52987650 - 52987689
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  52987650 atctgatggttgtgaagtgtttatgcacggtgcataagga 52987689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 7045300 - 7045361
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||    
T  7045300 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttt 7045361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 16277417 - 16277477
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    |||||||||||| ||||||||||||||||||||| | | |  ||||||||||||||||||||    
T  16277417 tgatggttgtgaagtgtttatgcacggtgcataaag-atttccttatgcaccataactttgc 16277477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 32233048 - 32232995
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  32233048 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 32232995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 37319458 - 37319523
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttg 88  Q
    ||||||||||  ||||| ||||||||||| |||||||||| ||||| ||||||||  |||||||||    
T  37319458 aaatctgatgaatgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataactttg 37319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 28299952 - 28300004
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    ||||||| ||||||| ||||||||||| ||| |||||||||||| ||||||||    
T  28299952 atctgatagttgtgaagtgtttatgcatggtacataaggaaatgacttatgca 28300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 23699390 - 23699331
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||  ||||||||    
T  23699390 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttt 23699331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 23717845 - 23717786
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||  ||||||||    
T  23717845 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttt 23717786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 23736301 - 23736242
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||  ||||||||    
T  23736301 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttt 23736242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 8718166 - 8718105
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| || |||||| ||||||||||||| | |  ||||||||||||||||||    
T  8718166 atctgatggttgtgaagtatttatgtacggtgcataagg-atttccttatgcaccataacttt 8718105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 9070053 - 9069992
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| || |||||| ||||||||||||| | |  ||||||||||||||||||    
T  9070053 atctgatggttgtgaagtatttatgtacggtgcataagg-atttccttatgcaccataacttt 9069992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 39099262 - 39099220
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaat 67  Q
    |||||||||||||||  | ||||||||||||||||||||||||    
T  39099262 atctgatggttgtgaaatatttatgcacggtgcataaggaaat 39099220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33774 - 33688
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33774 ccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 33688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19784361 - 19784275
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19784361 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 19784275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 30414004 - 30413918
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  30414004 ccatttttgttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataacttt 30413918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41099272 - 41099186
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  41099272 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 41099186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41451195 - 41451109
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41451195 ccatttttgttcaaaataaaagaaatctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 41451109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10237444 - 10237358
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10237444 ccatttttgttcaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 10237358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15227120 - 15227034
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15227120 ccatttttgttcaaaataaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15227034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34633297 - 34633383
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  34633297 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgtaccataacttt 34633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43690730 - 43690644
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  43690730 ccatttttgttcaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 43690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1149999 - 1150085
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  1149999 ccatttttgttcaaaataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataagggaataacttatgcaccataacttt 1150085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7857770 - 7857684
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  7857770 ccatttttgttcaaaattaaaaaaatctgatgattgtgatgtgtttatgcacggcgcataagaaaatggcttatgcaccataacttt 7857684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 9852331 - 9852274
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 9852274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 34648133 - 34648190
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 34648190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 23396538 - 23396484
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  23396538 atggttgtaaagtgtttatgcacggtgcataaggaaatggcttatgcaccataac 23396484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 15260854 - 15260913
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||    
T  15260854 tgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatgcaccataacttt 15260913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 13526669 - 13526735
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||  ||||||||||    
T  13526669 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataactttgc 13526735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 13616204 - 13616270
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||  ||||||||||    
T  13616204 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataactttgc 13616270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 35302591 - 35302648
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcctatgcaccataacttt 35302648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 40023279 - 40023324
Alignment:
Q  42 tgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  40023279 tgtttatgcacggtgtataaggaaatggcttatgcaccataacttt 40023324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 40247288 - 40247349
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactttgc 40247349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 32987445 - 32987506
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  32987445 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 32987506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 8550569 - 8550529
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaa 65  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  8550569 atctgatggttgtgaagtgtttatgcacggtgcataaggaa 8550529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 42433768 - 42433705
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||| ||||||||||||||||||| | |  ||||||||||||||||||    
T  42433768 aaatctgatggttgtgaagtgcttatgcacggtgcataagg-atttccttatgcaccataacttt 42433705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 10443586 - 10443633
Alignment:
Q  41 gtgtttatgcacggtgcataaggaaatggcttatgcaccataactttg 88  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||    
T  10443586 gtgtttatgcagggtgcataaggaaatggcttatgcataataactttg 10443633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 28698578 - 28698645
Alignment:
Q  23 aaatctgatggttgtgatgtgttta-tgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    |||||||||||||||||  |||||| |||| |||||||||| ||||||||||||||  ||||||||||    
T  28698578 aaatctgatggttgtgaaatgtttaatgcagggtgcataagaaaatggcttatgcataataactttgc 28698645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 39022040 - 39021979
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  39022040 atctgatgattgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 39021979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 2522924 - 2522871
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  2522924 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 2522871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 4836701 - 4836738
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataag 62  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4836701 atctgatggttgtgaagtgtttatgcacggtgcataag 4836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 4842146 - 4842183
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataag 62  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4842146 atctgatggttgtgaagtgtttatgcacggtgcataag 4842183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 7614133 - 7614094
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  7614133 atctgatggttgtgaagtgtttatgcatggtgcataagga 7614094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 12355488 - 12355437
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgc 76  Q
    |||| |||||||||| ||||||||||| |||||||||| ||||| |||||||    
T  12355488 atctaatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgc 12355437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 1208774 - 1208713
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| |||||||| | ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  1208774 atcttatggttgtaaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 1208713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 7058175 - 7058118
Alignment:
Q  29 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||| ||||||||||||||||||||| | | |  ||||||||||||||||||    
T  7058175 gatggttgtgaagtgtttatgcacggtgcataa-gtatttccttatgcaccataacttt 7058118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 30652009 - 30651963
Alignment:
Q  31 tggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  30652009 tggttgtgaagtgtttatgcagggtgcataaggaaatagattatgca 30651963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 40012186 - 40012243
Alignment:
Q  29 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||| | || |||||||| |||||||||||||||  ||||||||||||||||||    
T  40012186 gatggttgtaaagtctttatgcatggtgcataaggaaat-ccttatgcaccataacttt 40012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 15181856 - 15181815
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaa 66  Q
    |||||||| |||||| ||||||||||| ||||||||||||||    
T  15181856 atctgatgcttgtgaagtgtttatgcagggtgcataaggaaa 15181815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1621965 - 1621879
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1621965 ccatttttgttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 1621879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11786064 - 11785978
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11786064 ccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttt 11785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11798231 - 11798145
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11798231 ccatttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttt 11798145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13635701 - 13635787
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13635701 ccatttttattcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 13635787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49492488 - 49492574
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49492488 ccatttttattcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 49492574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51921241 - 51921327
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  51921241 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 51921327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 15051113 - 15051198
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15051113 catttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15051198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 30597788 - 30597703
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  30597788 catttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 30597703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 55765570 - 55765485
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55765570 catttttgttcaaaatgaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 55765485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 27865715 - 27865799
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  27865715 atttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataacttt 27865799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 36011931 - 36011847
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  36011931 atttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 36011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 49426033 - 49426119
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  49426033 ccatttttgttcaaaataaaagaaatttgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 49426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 46672527 - 46672443
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  46672527 atttttgttcaaaataaaataaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 46672443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 53441410 - 53441324
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  53441410 ccatttttgttcaaaataaaagaaatttgatggttgtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataacttt 53441324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 35291526 - 35291610
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  35291526 atttttgttcaaaataaaataaatcttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 35291610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 10472569 - 10472501
Alignment:
Q  19 aaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  10472569 aaagaaatctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 10472501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 26578176 - 26578251
Alignment:
Q  12 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  26578176 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgcaccatgacttt 26578251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 38245023 - 38244948
Alignment:
Q  12 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||    
T  38245023 caaaataaaagaaatctgatggttgtgaagtgtttatgaactgtgcagaaggaaatggcttatgcaccataacttt 38244948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 1729615 - 1729677
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||||||||    
T  1729615 atctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataacttt 1729677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 20861637 - 20861584
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  20861637 ttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataacttt 20861584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 30357868 - 30357811
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgaaccataacttt 30357811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 38010202 - 38010145
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  38010202 atggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataacttt 38010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 25574126 - 25574190
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  25574126 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 25574190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 16298989 - 16298924
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttg 88  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||  |||||||||    
T  16298989 aaatctgatggttgtgaagtgattatgcagggtgcataaggaaatgacttatgcataataactttg 16298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 36621701 - 36621764
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  36621701 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataactttgc 36621764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 805148 - 805109
Alignment:
Q  45 ttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  805148 ttatgcacggtgcataaggaaatggcttatgcaccataac 805109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 24686634 - 24686576
Alignment:
Q  29 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  24686634 gatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 24686576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 22181243 - 22181306
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| || |||||||||||||||||||| | |  ||||||||||||||||||    
T  22181243 aaatctgatggttgtgaagtttttatgcacggtgcataagg-atttccttatgcaccataacttt 22181306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 50643810 - 50643747
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||| ||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  50643810 aaatctgatggttatgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 50643747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 4168423 - 4168384
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4168423 atctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 26447412 - 26447451
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  26447412 atctgatggttgtgaagtgtttatgcacggtgcataagga 26447451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 27764305 - 27764244
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| || ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  27764305 atctgatggttgcgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 27764244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 45256040 - 45255979
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||| ||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  45256040 atctgatagttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 45255979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 29826604 - 29826645
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  29826604 aaatctgatggttgtgaagtgcttatgcacggtgcataagga 29826645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 637919 - 637883
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataa 61  Q
    ||||||||||||||| |||||||||||||||||||||    
T  637919 atctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 38485674 - 38485710
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataa 61  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38485674 atctgatggttgtgaagcgtttatgcacggtgcataa 38485710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 4e-37; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26637813 - 26637899
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26637813 ccatttttgttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataacttt 26637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14940332 - 14940418
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14940332 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 14940418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15416754 - 15416668
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15416754 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15416668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 13553072 - 13552987
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  13553072 catttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 13552987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 37456768 - 37456684
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  37456768 atttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataacttt 37456684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3884011 - 3884097
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3884011 ccatttttgttcaaaatgaaagaaatttgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 3884097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14394558 - 14394472
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  14394558 ccatttttattcaaaataaaagaaatctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttt 14394472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 30783516 - 30783439
Alignment:
Q  10 ttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30783516 ttcaaaatgaaagaaatctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 30783439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 16668794 - 16668856
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  16668794 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 16668856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 16552637 - 16552701
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  16552637 aaatatgatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcataataacttt 16552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 33868223 - 33868159
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  33868223 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 33868159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 13362835 - 13362774
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  13362835 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 13362774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 25017217 - 25017278
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  25017217 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 25017278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 4675025 - 4674965
Alignment:
Q  26 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 86  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||| |||  |||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactt 4674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 18465556 - 18465618
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||| ||||||||  ||||||||    
T  18465556 atctgatggttgtgaagtgtttatgcaggatgcataatgaaatgtcttatgcataataacttt 18465618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 28070153 - 28070214
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||| ||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  28070153 atctgatagttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 28070214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 34329192 - 34329131
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||| | | |  ||||||||||||||||||    
T  34329192 atctgatggttgtgaagtgtttatgcacggtgcataaag-atttccttatgcaccataacttt 34329131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 42512264 - 42512225
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  42512264 atctgatggttgtgaagtgtttatgcacggtggataagga 42512225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 23335707 - 23335768
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||  ||||||||||||||||||| || | |  ||||||||||||||||||    
T  23335707 atctgatggttgtgaaatgtttatgcacggtgcatacgg-atttccttatgcaccataacttt 23335768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 4e-37; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25889004 - 25889090
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25889004 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 25889090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 20434699 - 20434784
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434699 catttttgttcaaaatgaaagaaatctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 20434784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 49936914 - 49936999
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49936914 catttttgttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 49936999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24636016 - 24635930
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  24636016 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 24635930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50351893 - 50351807
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50351893 ccatttttgttcaaaatgatagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttt 50351807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 6314202 - 6314119
Alignment:
Q  4 tttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6314202 tttttgttcaaaatgaaagaaatttgatggctgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 6314119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43452632 - 43452546
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  43452632 ccatttttgttcaaaataaaagaaatctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 43452546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 48762307 - 48762393
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  48762307 ccatttttgttcaaaataaaagaaatctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 48762393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 19897737 - 19897822
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  19897737 catttttgttcaaaataaaagaaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttt 19897822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 18618923 - 18618839
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  18618923 atttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataacttt 18618839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 16976041 - 16975958
Alignment:
Q  4 tttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||    
T  16976041 tttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatacacggtgcataaggaaataacttatgaaccataacttt 16975958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 28375552 - 28375468
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  28375552 atttttgtttaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataacttt 28375468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 4097895 - 4097970
Alignment:
Q  12 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4097895 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 4097970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 23175509 - 23175584
Alignment:
Q  12 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  23175509 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataacttt 23175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 34369739 - 34369668
Alignment:
Q  12 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataa 83  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  34369739 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataa 34369668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 11421671 - 11421598
Alignment:
Q  14 aaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||    
T  11421671 aaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataacttt 11421598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 21256777 - 21256834
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataacttt 21256834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 31529663 - 31529728
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttg 88  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||    
T  31529663 aaatctgatggttgtgaagtgtttatgcatggtgcataaggaaatggcttatgcataataactttg 31529728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 33097473 - 33097407
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  33097473 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactttgc 33097407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 51801734 - 51801797
Alignment:
Q  26 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataactttgc 51801797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 37639407 - 37639345
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  37639407 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 37639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 44260586 - 44260520
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||  ||||||||||    
T  44260586 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactttgc 44260520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 44688608 - 44688674
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||  ||||||||||    
T  44688608 aaatctgatggttgtgaagtgtttatgcagcgtgcataaggaaatgacttatgcatgataactttgc 44688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 31083423 - 31083366
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| ||||||||| | ||| |||||||||||||||||||||||||||||||    
T  31083423 atggttgtgaagtgtttatgaatggtacataaggaaatggcttatgcaccataacttt 31083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 37228364 - 37228403
Alignment:
Q  45 ttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37228364 ttatgcacggtgcataaggaaatggcttatgcaccataac 37228403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 18056849 - 18056788
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  18056849 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 18056788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 35198181 - 35198243
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  35198181 atctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttt 35198243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 20507286 - 20507343
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||  | |||||||||  |||||||||||||||||||||||||||||||||    
T  20507286 atggttgtgaaatatttatgcacaatgcataaggaaatggcttatgcaccataacttt 20507343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 41033946 - 41033985
Alignment:
Q  45 ttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  41033946 ttatgcacggtgcataaggaaatgacttatgcaccataac 41033985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 16115913 - 16115877
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataagga 64  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16115913 tgatggttgtgaagtgtttatgcacggtgcataagga 16115877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 22348101 - 22348043
Alignment:
Q  28 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| |||||||||| |||||||||||| | |  ||||||||||||||||||    
T  22348101 tgatggttgtgaagtgtttatgcgcggtgcataagg-atttccttatgcaccataacttt 22348043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 13590517 - 13590471
Alignment:
Q  41 gtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  13590517 gtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 13590471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 41033322 - 41033266
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||| | |||||| | |||||||||||||||  ||||||||||||||||||    
T  41033322 atggttgtgatttctttatgtatggtgcataaggaaat-ccttatgcaccataacttt 41033266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 28323330 - 28323394
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||  ||||||||| | |||||||||  ||||| ||||||||  ||||||||    
T  28323330 aaatctgatggttgtgtagtgtttatggagggtgcataaaaaaatgacttatgcataataacttt 28323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 8149920 - 8149835
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8149920 catttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttt 8149835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 8154544 - 8154459
Alignment:
Q  2 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8154544 catttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttt 8154459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7487230 - 7487316
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7487230 ccatttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttt 7487316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15016542 - 15016628
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15016542 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 15016628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 39355123 - 39355039
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  39355123 atttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 39355039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9143675 - 9143589
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  9143675 ccatttttgttcaaaataaaagaaatctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 9143589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 34464801 - 34464715
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  34464801 ccatttttgttcaaaataaaagaaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttt 34464715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1292155 - 1292241
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||    
T  1292155 ccatttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgtacggtgcataagaaaataacttatgcaccataacttt 1292241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 2263652 - 2263577
Alignment:
Q  12 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||| ||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2263652 caaaatgaaataaatgcgatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataacttt 2263577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 18762928 - 18762871
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 18762871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 41346045 - 41346102
Alignment:
Q  30 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||    
T  41346045 atggttgtgaagtgtttatatacggtgcataagaaaatggcttatgcaccataacttt 41346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 5098784 - 5098720
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  5098784 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 5098720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 21155480 - 21155441
Alignment:
Q  45 ttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21155480 ttatgcacggtgcataaggaaatggcttatgcaccataac 21155441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 27974291 - 27974330
Alignment:
Q  45 ttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27974291 ttatgcacggtgcataaggaaatggcttatgcaccataac 27974330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 28060820 - 28060859
Alignment:
Q  45 ttatgcacggtgcataaggaaatggcttatgcaccataac 84  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28060820 ttatgcacggtgcataaggaaatggcttatgcaccataac 28060859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 18298111 - 18298172
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  18298111 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 18298172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 39548110 - 39548044
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| |||||| |  ||||||||||    
T  39548110 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgtataataactttgc 39548044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 25995354 - 25995290
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| || ||||||||  ||||||||||||||| ||||||||  ||||||||    
T  25995354 aaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttatgcataataacttt 25995290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 40853685 - 40853740
Alignment:
Q  31 tggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 86  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||  |||||||    
T  40853685 tggttgtgaagtgtttatgcaggatgcataaggaaatggcttatgcataataactt 40853740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 13081858 - 13081924
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttgc 89  Q
    ||||| ||||||||||| ||||||||| | ||||||||| |||||| ||||||||  ||||||||||    
T  13081858 aaatcagatggttgtgaagtgtttatgtagggtgcataatgaaatgacttatgcataataactttgc 13081924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 16142073 - 16142127
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  16142073 aaatctaatggttgtgaagtgtttatgcagcgtgcataaggaaatggcttgtgca 16142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 20709839 - 20709778
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||| |||||| | |  ||||||||||||||||||    
T  20709839 atctgatggttgtgaagtgtttatgcacggtggataagg-atttccttatgcaccataacttt 20709778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 25192957 - 25192896
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| |||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  25192957 atctaatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 25192896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 36636935 - 36636999
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||| | ||| |||||| ||||| ||||||||  ||||||||    
T  36636935 aaatctgatggttgtgaagtgtttatgtagggtacataagaaaatgacttatgcataataacttt 36636999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 4281788 - 4281850
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||| ||  || |||||||||||| ||||||||  ||||||||    
T  4281788 atctgatggttgtgaagtgtttatacagagtacataaggaaatgtcttatgcataataacttt 4281850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 14551319 - 14551379
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |  ||||||||||||||||||    
T  14551319 atctgatggttgtgaagtgtttatgcac-gtgcataa-gaatttccttatgcaccataacttt 14551379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 24024633 - 24024685
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 86  Q
    |||||| ||||||||||| ||||||||||||| || ||||||||  |||||||    
T  24024633 ttgtgaagtgtttatgcatggtgcataaggaattgacttatgcataataactt 24024685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 8399 - 8483
Alignment:
Q  3 atttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8399 atttttgttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttt 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24364 - 24278
Alignment:
Q  1 ccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24364 ccatttttgttcaaaatcaaagaaatttaatggttgtgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttt 24278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 661 - 738
Alignment:
Q  10 ttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  661 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 25230 - 25293
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  25230 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 25293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 10675 - 10736
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||| |||||| | |  ||||||||||||||||||    
T  10675 atctgatggttgtgaagtgtttatgcacggtgtataagg-atttccttatgcaccataacttt 10736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 13678 - 13617
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||| |||||| | |  ||||||||||||||||||    
T  13678 atctgatggttgtgaagtgtttatgcacggtggataagg-atttccttatgcaccataacttt 13617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 1661 - 1618
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 77  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||    
T  1661 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgca 1618  T

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Target: scaffold0558 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 2508 - 2451
Alignment:
Q  29 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| |  |||||||||||||||||||||||  ||||| ||||||||||||    
T  2508 gatggttgtgatttccttatgcacggtgcataaggaaat-ccttatacaccataacttt 2451  T

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Target: scaffold0558; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 5920 - 5863
Alignment:
Q  29 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||||||||| |  |||||||||||||||||||||||  ||||| ||||||||||||    
T  5920 gatggttgtgatttccttatgcacggtgcataaggaaat-ccttatacaccataacttt 5863  T

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Target: scaffold0337 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 7082 - 7021
Alignment:
Q  25 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    ||||||||||||||| |||||||||||||||| |||| ||  | | |||||||||||||||||    
T  7082 atctgatggttgtgaagtgtttatgcacggtgtataaagatttcg-ttatgcaccataacttt 7021  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 209383 - 209330
Alignment:
Q  34 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||    
T  209383 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttt 209330  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 11188 - 11251
Alignment:
Q  23 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 87  Q
    |||| |||||||||||| ||| |||||||| |||||||||| | |  ||||||||||||||||||    
T  11188 aaatatgatggttgtgaagtgcttatgcacagtgcataagg-atttccttatgcaccataacttt 11251  T

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