View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6860_low_1 (Length: 892)

Name: NF6860_low_1
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6860_low_1
NF6860_low_1
[»] chr1 (3 HSPs)
chr1 (1-546)||(43427152-43427700)
chr1 (548-871)||(43426771-43427094)
chr1 (210-254)||(4048507-4048551)
[»] chr7 (8 HSPs)
chr7 (101-546)||(31403504-31403952)
chr7 (184-542)||(42304899-42305259)
chr7 (186-546)||(3897949-3898306)
chr7 (186-512)||(3884099-3884431)
chr7 (545-646)||(31403348-31403449)
chr7 (548-646)||(3898363-3898461)
chr7 (546-611)||(3884506-3884571)
chr7 (546-616)||(42305319-42305389)
[»] chr2 (1 HSPs)
chr2 (94-470)||(17247168-17247553)
[»] chr3 (1 HSPs)
chr3 (101-297)||(19671160-19671347)
[»] chr6 (1 HSPs)
chr6 (266-348)||(11338503-11338585)
[»] chr4 (2 HSPs)
chr4 (186-256)||(55311249-55311319)
chr4 (171-231)||(55267126-55267186)
[»] chr5 (1 HSPs)
chr5 (164-231)||(24010393-24010460)


Alignment Details
Target: chr1 (Bit Score: 455; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 1 - 546
Target Start/End: Complemental strand, 43427700 - 43427152
Alignment:
Q  1 tcaaagctatataactatacggatttatattttcttaaccatttctctctatcccgaacaaattaacacttataataaatgtaatcttttagcaagacat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  43427700 tcaaagctatataactatacggatttatattttcttaaccatttctctctatcccgaacaaattaacacttataataaatgtaattttttagcaagacat 43427601  T
Q  101 aactgattcattttattaaagaataacaggtacaaatgtagatggtacttcatgaaaaatatagggttaggatgaaataaggtaactctagctatgttat 200  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||||    
T  43427600 aactaattcattttattaaataataacaggtacaaatgtagatggtacttcatgaaaaatattaggttagggtgagataaggtaactctagctatgttat 43427501  T
Q  201 aaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaataatatctccaaattcatt 297  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||| |||||    
T  43427500 aagctaccctatttgtttgcctcctgacatagctcacaataaaattattgcgagatgacaatagattcttacatctagaaataatatctccaaactcatt 43427401  T
Q  298 gtttggagtagagttggagttaatagtatcaacaaataacttgcagtcagactcaaagataacatatggtatgtgacaattaatagcaacgtttatagcc 397  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  43427400 gtttggagtagagttggagttaatagtatcaacaaataacttacggtcagactcaaagataacagatggtatgtgacaattaatagcaatgtttatagcc 43427301  T
Q  398 gtaaataagtctagcacttcagcttccagaggagtagaattgaaataggaatactttaaaaagcctaacaacaacgccctggaggagtctttaaagcaca 497  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  43427300 gtaaataagtctagcacttcagcttctagaggagtagaattgaaataggaatactttgaaaagcctaacaacaacgcccttgaggagtctttaaagcaca 43427201  T
Q  498 tgtcaagacccgtaatagtgttgttgttaaatagtgcacaatccacatt 546  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  43427200 tgtcaagacccgtagtagtgttgttgttaaagagtgcacaatccacatt 43427152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 548 - 871
Target Start/End: Complemental strand, 43427094 - 43426771
Alignment:
Q  548 actcggttgccttgctttttgcatatatatccattcttgaagagaatttttagcccgctgcacagtagattcggaaggtgtgtatgtgccttcccataat 647  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  43427094 actcggttgccttgcattttgcatatacatccattcttgaagagaatttttagcacgctgcgcaatagattcggaaggtgtgtatgtgccttcccataat 43426995  T
Q  648 aaatgtattttattctttcnnnnnnnnttatatgatgtctttaaacgatgtttagattttgcctctcnnnnnnnnnnnnnnnnnnnnnnnnntattgata 747  Q
    |||||||||||||||||||        |||||||||||||||||||||| |||||||||||||||||                         ||||| ||    
T  43426994 aaatgtattttattctttcaaaaaaaattatatgatgtctttaaacgatatttagattttgcctctcaaaaattaaaaaaattgtgtaaaaatattggta 43426895  T
Q  748 agtgccaaatttatctaatttataataggtttgtagacactaattacttggtttgatagaaaacaatttactttttccaattattgtatatatttaataa 847  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43426894 agtgccaaatttatctaatttataataagtttgtagacactaattacttggtttgatagaaaacaatttactttttccaattattgtatatatttaataa 43426795  T
Q  848 ttaggttttgagacataagaatag 871  Q
    ||||||||||||||||||||||||    
T  43426794 ttaggttttgagacataagaatag 43426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 4048507 - 4048551
Alignment:
Q  210 tatttgtttgcctcctgacatagctcacaataaaattattgcgag 254  Q
    |||||| ||||||||||||||| || |||||||||||||||||||    
T  4048507 tatttgcttgcctcctgacataactaacaataaaattattgcgag 4048551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 4e-99; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 101 - 546
Target Start/End: Complemental strand, 31403952 - 31403504
Alignment:
Q  101 aactgattcattttattaaagaataacaggtacaaatgtagatggtacttcatgaaaaatatag-ggttaggatgaaataaggtaactctagctatgtta 199  Q
    |||| |||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||| | || |||| ||| |||||  | ||||||||||||||    
T  31403952 aactaattcatttcattaaagaataacgggtacaa-tgtagagggtacttcatgaaaaatatggaggctagggtgagataagaaagctctagctatgtta 31403854  T
Q  200 taaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaataatatctccaaattcat 296  Q
    | | ||| |||||||||||| |||||||||||||||||||||||||||||| |||||   |||||||  ||||||||||| ||||||||||  || ||||    
T  31403853 tgagctaccctatttgtttgtctcctgacatagctcacaataaaattattgtgagatgataatagatccttacatctagatataatatctctgaactcat 31403754  T
Q  297 tgtttggagtagagttggagttaatagtatcaacaaataacttgcagtcagactcaaagataacatatggtatgtgacaattaatagcaacgtttatagc 396  Q
    ||||||||||||| ||||||||||||| |||||||| |||| | ||||  ||||||||||||||| |||| ||||| |||| |||| ||| |||||| ||    
T  31403753 tgtttggagtagatttggagttaatagcatcaacaagtaacctacagttggactcaaagataacagatggcatgtggcaatcaataacaatgtttatggc 31403654  T
Q  397 cgtaaataagtctagcacttcagcttccagaggagtagaattgaaataggaatactttaaaaagcctaacaacaacgccctggaggagtctttaaagcac 496  Q
    |  ||||||| |||   ||| ||||||  ||| ||||||||||||||||||||||||  | |||||||||||||||| ||  ||||||||| ||||| |     
T  31403653 ctcaaataagcctattgcttgagcttctggagtagtagaattgaaataggaatacttcgagaagcctaacaacaacgacccagaggagtctctaaagtat 31403554  T
Q  497 atgtcaagacccgtaatagtgttgttgttaaatagtgcacaatccacatt 546  Q
    ||| |||||| ||||||||||||||||||||| |||||| ||||||||||    
T  31403553 atggcaagactcgtaatagtgttgttgttaaagagtgcataatccacatt 31403504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 184 - 542
Target Start/End: Original strand, 42304899 - 42305259
Alignment:
Q  184 aactctagctatgttataaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaata 280  Q
    |||||||||||||||||||  || | |||||||||||||||| |||||||||| ||||||||||||| |||||   |||||||   ||||||||||||||    
T  42304899 aactctagctatgttataagataccttatttgtttgcctcctcacatagctcaaaataaaattattgtgagatgacaatagatccatacatctagaaata 42304998  T
Q  281 atatctccaaattcattgtttggagtagagttggagttaatagtatcaacaaataacttgcagtcagactcaaagataacatatggtatgtgacaattaa 380  Q
    | |||||| || ||||| | ||||||||||||||||||||| |||||| ||| |||| | |||||| | | ||| |||||| |||  || |||| |||||    
T  42304999 acatctccgaactcattatgtggagtagagttggagttaat-gtatcagcaagtaacctacagtcatatttaaatataacagatgtcatttgacgattaa 42305097  T
Q  381 tagcaacgtttatagccgtaaataagtctagcacttcagcttccagaggagtagaattgaaataggaatactttaaaaagcctaacaacaacgccctgga 480  Q
    || ||||||||||||||  ||||||| ||| ||||||||||||   |||||||||| ||||||||||||||||  | ||| ||||||||||||| | |||    
T  42305098 taacaacgtttatagcctcaaataagcctaacacttcagcttctgaaggagtagaaatgaaataggaatacttcgagaagtctaacaacaacgctccgga 42305197  T
Q  481 ggagtctttaaagcacatgtcaagacccgtaatagtgttgttgttaaatagtgcacaatcca 542  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| ||||| ||||| |||||||    
T  42305198 ggagtctctaaagcatatgccaagacccgtaatagtgttgttattaaagagtgcgcaatcca 42305259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 186 - 546
Target Start/End: Original strand, 3897949 - 3898306
Alignment:
Q  186 ctctagctatgttataaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaataat 282  Q
    ||||||||||||||| | ||| | ||||| ||||||| |||||||  |||||||||||||||||  |||||   |||||||  ||||||||| |||||||    
T  3897949 ctctagctatgttatgagctaccttatttatttgccttctgacattactcacaataaaattattatgagatgacaatagatccttacatctataaataat 3898048  T
Q  283 atctccaaattcattgtttggagtagagttggagttaatagtatcaacaaataacttgcagtcagactcaaagataacatatggtatgtgacaattaata 382  Q
    ||||||||| ||||     |||||||||||||||||||||||  |||||| |||| |  |||| ||||||||||||||| |||  || ||||||||||||    
T  3898049 atctccaaactcat-----ggagtagagttggagttaatagtgccaacaagtaacctatagtcggactcaaagataacaaatgtcatatgacaattaata 3898143  T
Q  383 gcaacgtttatagccgtaaataagtctagcacttcagcttccagaggagtagaattgaaataggaatactttaaaaagcctaacaacaacgccctggagg 482  Q
     ||| ||||||||||  |||||||  || |  ||||||| |    |||||| |||| ||||||||||||||| | |||||||||||| | ||||  | ||    
T  3898144 acaatgtttatagcctcaaataagcttaacgtttcagctactgatggagtaaaatttaaataggaatacttttagaagcctaacaac-atgccccagcgg 3898242  T
Q  483 agtctttaaagcacatgtcaagacccgtaatagtgttgttgttaaatagtgcacaatccacatt 546  Q
    ||||||||||| | ||||||||||  |||||||||||||| ||||| ||| |||||||||||||    
T  3898243 agtctttaaagaagatgtcaagacatgtaatagtgttgttattaaagagttcacaatccacatt 3898306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 186 - 512
Target Start/End: Original strand, 3884099 - 3884431
Alignment:
Q  186 ctctagctatgttataaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaataat 282  Q
    ||||||||||| ||  | |||||||||||| ||| ||||||||||  |||||||||||||||||| |||||   |||||||  |||||||||||||||||    
T  3884099 ctctagctatgctacgagctatcctatttgcttgtctcctgacattactcacaataaaattattgtgagatgacaatagatccttacatctagaaataat 3884198  T
Q  283 atctccaaattcattgtttggagtagag-ttggagttaatagtatcaacaaataacttgcagtcagactcaaagataacatatggtatgtgacaattaat 381  Q
    |||||| || ||||| | |||||||||| ||| |||||||||| ||||||| |||| | ||||| ||| |  | |||||| |||  ||||||||||||||    
T  3884199 atctccgaactcattatgtggagtagagtttgaagttaatagtgtcaacaagtaacctacagtcggacacggatataacagatgtcatgtgacaattaat 3884298  T
Q  382 agcaacgtttatagccgtaaataagtctagcacttcagct--tccagaggagtagaattgaaataggaatactttaaaaagcctaacaacaacgccctgg 479  Q
    | ||| ||||||||||  |||||||  || || |||||||  |  | | |||||||||||||||| ||||||||| | ||||||||||||||||||   |    
T  3884299 atcaatgtttatagcctcaaataagcttaacatttcagctactgaaaaagagtagaattgaaataagaatactttgagaagcctaacaacaacgcctcag 3884398  T
Q  480 aggagtctttaaagcacatgtcaagacccgtaa 512  Q
    |||| ||||||||||| ||| ||| ||| ||||    
T  3884399 aggattctttaaagcagatgccaaaacctgtaa 3884431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 545 - 646
Target Start/End: Complemental strand, 31403449 - 31403348
Alignment:
Q  545 ttgactcggttgccttgctttttgcatatatatccattcttgaagagaatttttagcccgctgcacagtagattcggaaggtgtgtatgtgccttcccat 644  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||  ||||  | |||  |||||||||| |||||||||| ||    
T  31403449 ttgactcggttgccttgctttttgcatctacatccattcttggagagaatttttagcccgcaacacaagatatttagaaggtgtgtttgtgccttcctat 31403350  T
Q  645 aa 646  Q
    ||    
T  31403349 aa 31403348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 548 - 646
Target Start/End: Original strand, 3898363 - 3898461
Alignment:
Q  548 actcggttgccttgctttttgcatatatatccattcttgaagagaatttttagcccgctgcacagtagattcggaaggtgtgtatgtgccttcccataa 646  Q
    ||||||| ||||||||||||||||||  ||||||||||| |||||||||||| | || |||||| || ||||| ||||||||| ||| |||||||||||    
T  3898363 actcggtcgccttgctttttgcatattcatccattcttggagagaatttttaccacgttgcacaataaattcgcaaggtgtgtttgttccttcccataa 3898461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 546 - 611
Target Start/End: Original strand, 3884506 - 3884571
Alignment:
Q  546 tgactcggttgccttgctttttgcatatatatccattcttgaagagaatttttagcccgctgcaca 611  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||    
T  3884506 tgactcggtggccttgctttttgcatatacatccattcttggagagaaattttagcacgctgcaca 3884571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 42305319 - 42305389
Alignment:
Q  546 tgactcggttgccttgctttttgcatatatatccattcttgaagagaatttttagcccgctgcacagtaga 616  Q
    |||||||||||| ||| |||||||||| | |||||||  || |||||||||||||| || |||||| ||||    
T  42305319 tgactcggttgcgttgttttttgcatacacatccatttatggagagaatttttagcacgttgcacaataga 42305389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 4e-68; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 94 - 470
Target Start/End: Complemental strand, 17247553 - 17247168
Alignment:
Q  94 aagacataactgattcattttattaaagaataacaggtacaa-----atgtagatggtacttcatgaaaaatatagggt-taggatgaaataaggtaact 187  Q
    |||||| |||| ||| ||||||||||| |||||| |||||||     ||||||||||||| ||||||||||||| | |  || | ||| |||||| | ||    
T  17247553 aagacagaactaatttattttattaaaaaataacgggtacaatgtagatgtagatggtacctcatgaaaaatatggagactaaggtgagataaggaagct 17247454  T
Q  188 ctagctatgttataaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaataatat 284  Q
     || ||||||||| ||||| | ||||||||||||| ||||||||  |||||||||||||||||||||||   |||||||  |||||||||||||| ||||    
T  17247453 ttaactatgttatgaactaccttatttgtttgccttctgacataattcacaataaaattattgcgagatgacaatagatccttacatctagaaatgatat 17247354  T
Q  285 ctccaaattcattgtttggagtagagttggagttaatagtatcaacaaataacttgcagtcagactcaaagataacatatggtatgtgacaattaatagc 384  Q
    |||| || |||||||||| ||||||||||||||||||||||||||||| |||| | ||||  ||||||||||||||| |||  |||||||||||||||||    
T  17247353 ctccgaactcattgtttgaagtagagttggagttaatagtatcaacaagtaacctacagttggactcaaagataacagatgacatgtgacaattaatagc 17247254  T
Q  385 aacgtttatagccgtaaataagtctagcacttcagcttccagaggagtagaattgaaataggaatactttaaaaagcctaacaaca 470  Q
    || ||||||||||  ||||||| ||| | |||| | |||  ||||||||||||  ||||| |||| |||  | |||||||||||||    
T  17247253 aatgtttatagcctcaaataagcctaacgcttctggttctggaggagtagaatgaaaataagaatgcttcgagaagcctaacaaca 17247168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 19671347 - 19671160
Alignment:
Q  101 aactgattcattttattaaagaataacaggtacaaatgtagatggtacttcatgaaaaatatagggttaggatgaaataaggtaactctagctatgttat 200  Q
    |||| |||||||| ||||| || ||| ||||||||||  ||||||||| ||||||||||||| ||| |||| ||  |||||| | |||||||||||||||    
T  19671347 aactaattcatttcattaatgagtaataggtacaaata-agatggtacatcatgaaaaatatggggctagggtgggataaggaagctctagctatgttat 19671249  T
Q  201 aaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat---aatagatttttacatctagaaataatatctccaaattcatt 297  Q
    || ||| | ||||           |||||||||||| |||||||||||||||||||   |||||||  |||||||||||||| |||||||| || |||||    
T  19671248 aagctaccttatt-----------tgacatagctcataataaaattattgcgagatgacaatagatccttacatctagaaatgatatctccgaactcatt 19671160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 348
Target Start/End: Original strand, 11338503 - 11338585
Alignment:
Q  266 ttacatctagaaataatatctccaaattcattgtttggagtagagttggagttaatagtatcaacaaataacttgcagtcaga 348  Q
    ||||||||||| || ||||||||||| |||||    ||||||||| ||||| |||||| |||||||| ||||||||| |||||    
T  11338503 ttacatctagagattatatctccaaactcattaagaggagtagaggtggagataatagcatcaacaactaacttgcaatcaga 11338585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 55311249 - 55311319
Alignment:
Q  186 ctctagctatgttataaactatcctatttgtttgcctcctgacatagctcacaataaaattattgcgagat 256  Q
    |||||| |||||||||| |||||||| ||| ||||||||| ||||| || ||| |||||||||||| ||||    
T  55311249 ctctagttatgttataagctatcctaattgcttgcctcctaacataacttacagtaaaattattgcaagat 55311319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 55267186 - 55267126
Alignment:
Q  171 gatgaaataaggtaactctagctatgttataaactatcctatttgtttgcctcctgacata 231  Q
    ||||| |||||| ||||||||| ||||||| | ||| ||||||| ||||||||||||||||    
T  55267186 gatgagataaggaaactctagcaatgttatgagctaccctatttttttgcctcctgacata 55267126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 24010393 - 24010460
Alignment:
Q  164 gggttaggatgaaataaggtaactctagctatgttataaactatcctatttgtttgcctcctgacata 231  Q
    |||||||||||| |||||| |  |||||||||||||| | ||| ||| |||| |||||||||||||||    
T  24010393 gggttaggatgagataaggaagttctagctatgttatgagctaccctgtttgcttgcctcctgacata 24010460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University