View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6860_low_27 (Length: 418)
Name: NF6860_low_27
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6860_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 387; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 1 - 415
Target Start/End: Original strand, 44826525 - 44826938
Alignment:
| Q |
1 |
cacaatctcttgaagctgcaaaacatggacagtgtcgacttctacactgactcttagtacactgacatcctccaaatagatttttacagagctttgaaca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
44826525 |
cacaatctcttgaagctgcaaaacatggacagtgtcgacttctacactgactcttagtacactgacatcctccaaatcgatttttacagagctttgaaca |
44826624 |
T |
|
| Q |
101 |
cctgaaggtagaaaatataactgatcacattgaaaacatagttgttttccatcgaaaagtaacataattaaatgaaaattgacatacccacaatattttt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826625 |
cctgaaggtaaaaaatataactgatcacattgaaaacatagttgttttccatcgaaaagtaacataattaaatgaaaattgacatacccacaatattttt |
44826724 |
T |
|
| Q |
201 |
cacagcaataaccattaagacgacatgtacattgctttccacacgccccctcacattcacaaggtgtatagtgcttttccagtttgtttttctcatcggt |
300 |
Q |
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|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826725 |
cacagcaaaaaccattaagacgacatggacattgctttccacacgccccctcacattcacaaggtgtatagtgcttttccagtttgtttttctcatcggt |
44826824 |
T |
|
| Q |
301 |
atttcttcttcttttccatttggatggaagtccacaagattttgaagaatatttgaacttcttagatttgctctttcttgacatcgaccttgactttgat |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826825 |
atttcttcttcttttccatttggatggaagtccacaagattttgaagaatatttgaacttcttagatttgctctttcttgacatcgaccttgactttgat |
44826924 |
T |
|
| Q |
401 |
gtccatctcattgtc |
415 |
Q |
| |
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| |||||||||||| |
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| T |
44826925 |
g-gcatctcattgtc |
44826938 |
T |
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