View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6860_low_34 (Length: 382)

Name: NF6860_low_34
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6860_low_34
NF6860_low_34
[»] chr5 (52 HSPs)
chr5 (13-289)||(40131624-40131900)
chr5 (170-318)||(21522724-21522872)
chr5 (170-318)||(21533290-21533438)
chr5 (170-317)||(21542005-21542152)
chr5 (162-292)||(39698541-39698671)
chr5 (232-318)||(13287398-13287484)
chr5 (233-318)||(21191056-21191141)
chr5 (228-337)||(41633690-41633799)
chr5 (162-293)||(7677704-7677835)
chr5 (202-293)||(30183548-30183639)
chr5 (233-299)||(6247615-6247681)
chr5 (228-306)||(10298555-10298633)
chr5 (159-293)||(19579700-19579834)
chr5 (215-319)||(41995444-41995546)
chr5 (233-318)||(15382451-15382538)
chr5 (163-285)||(3966510-3966632)
chr5 (162-299)||(31084316-31084447)
chr5 (233-299)||(33178018-33178084)
chr5 (217-293)||(21351889-21351965)
chr5 (234-293)||(42893359-42893418)
chr5 (238-312)||(14674249-14674323)
chr5 (233-291)||(21576745-21576803)
chr5 (233-306)||(8420013-8420086)
chr5 (240-320)||(15405062-15405140)
chr5 (234-318)||(30135287-30135372)
chr5 (161-293)||(37328774-37328904)
chr5 (162-316)||(19552476-19552626)
chr5 (237-299)||(7218271-7218333)
chr5 (163-293)||(18316856-18316985)
chr5 (223-292)||(22423802-22423871)
chr5 (237-318)||(24906305-24906386)
chr5 (232-292)||(5894832-5894892)
chr5 (259-334)||(6072339-6072415)
chr5 (237-293)||(12159951-12160007)
chr5 (236-312)||(43001780-43001856)
chr5 (259-318)||(22013388-22013447)
chr5 (255-314)||(40000557-40000616)
chr5 (258-337)||(2436876-2436956)
chr5 (245-335)||(4105213-4105306)
chr5 (257-299)||(22611761-22611803)
chr5 (233-335)||(28588674-28588775)
chr5 (261-318)||(3751958-3752014)
chr5 (255-292)||(6770543-6770580)
chr5 (217-306)||(12641660-12641749)
chr5 (233-274)||(15884006-15884047)
chr5 (233-298)||(27932229-27932294)
chr5 (235-291)||(17177025-17177081)
chr5 (258-318)||(26716118-26716178)
chr5 (258-318)||(26985858-26985918)
chr5 (255-299)||(31264431-31264475)
chr5 (202-318)||(36642731-36642847)
chr5 (257-293)||(38464388-38464424)
[»] chr8 (49 HSPs)
chr8 (162-318)||(22651950-22652106)
chr8 (161-318)||(29510232-29510389)
chr8 (163-299)||(29447040-29447176)
chr8 (161-318)||(4673353-4673510)
chr8 (162-299)||(15816058-15816195)
chr8 (204-299)||(2572027-2572122)
chr8 (161-318)||(22197670-22197827)
chr8 (162-318)||(28745472-28745628)
chr8 (161-318)||(8343290-8343447)
chr8 (233-334)||(20873027-20873128)
chr8 (234-318)||(4298887-4298971)
chr8 (232-292)||(25566841-25566901)
chr8 (162-335)||(27067231-27067403)
chr8 (233-312)||(36450754-36450833)
chr8 (233-287)||(4948657-4948711)
chr8 (162-284)||(11927015-11927137)
chr8 (233-315)||(18170482-18170564)
chr8 (233-315)||(18634050-18634132)
chr8 (162-301)||(11944656-11944795)
chr8 (162-269)||(29447467-29447574)
chr8 (257-316)||(36934646-36934705)
chr8 (231-285)||(8342979-8343033)
chr8 (255-317)||(41838145-41838207)
chr8 (234-299)||(14134692-14134757)
chr8 (233-335)||(22595950-22596053)
chr8 (223-299)||(13436954-13437030)
chr8 (236-318)||(25192350-25192432)
chr8 (233-318)||(24669407-24669492)
chr8 (233-293)||(24613520-24613579)
chr8 (233-285)||(30077387-30077439)
chr8 (255-299)||(34897078-34897122)
chr8 (235-283)||(40332200-40332248)
chr8 (258-317)||(3677761-3677820)
chr8 (170-297)||(4122186-4122313)
chr8 (232-295)||(17468507-17468570)
chr8 (234-309)||(20679396-20679471)
chr8 (264-299)||(24196628-24196663)
chr8 (269-316)||(24727790-24727837)
chr8 (255-334)||(29775994-29776073)
chr8 (232-299)||(30271290-30271357)
chr8 (233-299)||(5813585-5813651)
chr8 (239-293)||(18407718-18407772)
chr8 (214-292)||(21465412-21465490)
chr8 (255-293)||(41831962-41832000)
chr8 (256-292)||(31514872-31514909)
chr8 (234-299)||(31556990-31557054)
chr8 (162-226)||(3951476-3951540)
chr8 (259-299)||(27101508-27101548)
chr8 (259-291)||(35519833-35519865)
[»] chr6 (67 HSPs)
chr6 (162-318)||(9107299-9107455)
chr6 (161-317)||(8365447-8365603)
chr6 (162-318)||(16766671-16766827)
chr6 (232-337)||(10770673-10770778)
chr6 (233-318)||(34595108-34595193)
chr6 (235-333)||(16833267-16833365)
chr6 (192-299)||(5970067-5970174)
chr6 (163-289)||(31384923-31385048)
chr6 (174-299)||(8713972-8714098)
chr6 (239-316)||(1681734-1681811)
chr6 (233-318)||(8776973-8777058)
chr6 (233-301)||(7801156-7801224)
chr6 (234-317)||(15489733-15489816)
chr6 (162-292)||(17302556-17302687)
chr6 (232-318)||(12696298-12696384)
chr6 (234-308)||(24645464-24645539)
chr6 (233-299)||(853859-853925)
chr6 (233-319)||(7977830-7977916)
chr6 (233-318)||(426514-426599)
chr6 (233-312)||(17841589-17841668)
chr6 (233-334)||(28152062-28152157)
chr6 (234-318)||(7938090-7938174)
chr6 (233-285)||(28715302-28715354)
chr6 (202-285)||(9522898-9522981)
chr6 (162-319)||(9629356-9629513)
chr6 (188-314)||(17435177-17435303)
chr6 (161-299)||(18367829-18367967)
chr6 (192-314)||(25038030-25038152)
chr6 (160-293)||(4040465-4040598)
chr6 (233-293)||(4877941-4878002)
chr6 (232-293)||(7930304-7930365)
chr6 (256-293)||(25010225-25010262)
chr6 (238-299)||(31959152-31959213)
chr6 (165-299)||(32978842-32978966)
chr6 (255-292)||(34225831-34225868)
chr6 (232-316)||(3398595-3398678)
chr6 (162-286)||(7248364-7248488)
chr6 (232-291)||(9911527-9911587)
chr6 (255-299)||(13360394-13360438)
chr6 (232-292)||(24115846-24115906)
chr6 (233-284)||(403864-403915)
chr6 (233-299)||(3209374-3209441)
chr6 (164-299)||(5000557-5000692)
chr6 (259-318)||(33001315-33001374)
chr6 (162-285)||(34073278-34073399)
chr6 (239-293)||(1191706-1191760)
chr6 (259-317)||(7086770-7086828)
chr6 (259-317)||(8805598-8805656)
chr6 (232-318)||(9027152-9027238)
chr6 (206-300)||(9195727-9195821)
chr6 (255-317)||(9658854-9658916)
chr6 (232-285)||(9025493-9025546)
chr6 (161-281)||(10339053-10339174)
chr6 (255-316)||(13851712-13851773)
chr6 (238-299)||(25096416-25096477)
chr6 (255-316)||(1532214-1532277)
chr6 (257-285)||(2117083-2117111)
chr6 (233-285)||(6898281-6898333)
chr6 (233-285)||(7265593-7265645)
chr6 (220-300)||(8931589-8931669)
chr6 (229-289)||(10827557-10827617)
chr6 (259-299)||(10842525-10842565)
chr6 (255-283)||(16388255-16388283)
chr6 (255-299)||(19040345-19040389)
chr6 (255-299)||(19044457-19044501)
chr6 (234-274)||(27904037-27904077)
chr6 (234-274)||(31429004-31429044)
[»] chr1 (63 HSPs)
chr1 (162-317)||(47989473-47989627)
chr1 (174-318)||(6612112-6612256)
chr1 (161-299)||(9828037-9828175)
chr1 (214-336)||(28273069-28273191)
chr1 (170-335)||(9629837-9630002)
chr1 (162-318)||(5944255-5944413)
chr1 (161-318)||(40917725-40917880)
chr1 (232-292)||(24577185-24577245)
chr1 (238-338)||(48450592-48450692)
chr1 (161-297)||(31694638-31694776)
chr1 (162-309)||(32461393-32461539)
chr1 (216-318)||(5376483-5376585)
chr1 (233-299)||(22881616-22881682)
chr1 (233-299)||(38078661-38078727)
chr1 (164-292)||(1486646-1486768)
chr1 (240-337)||(14359529-14359625)
chr1 (233-336)||(19058856-19058960)
chr1 (232-299)||(113292-113359)
chr1 (234-293)||(40258934-40258993)
chr1 (232-293)||(1704991-1705052)
chr1 (237-314)||(18471276-18471355)
chr1 (235-323)||(21378547-21378635)
chr1 (255-318)||(398787-398850)
chr1 (255-338)||(5898288-5898371)
chr1 (255-318)||(7918233-7918296)
chr1 (163-250)||(21032248-21032335)
chr1 (233-292)||(22515887-22515946)
chr1 (233-292)||(42359449-42359508)
chr1 (233-312)||(46348383-46348462)
chr1 (160-293)||(6427460-6427596)
chr1 (234-316)||(16927186-16927268)
chr1 (233-283)||(18337338-18337388)
chr1 (162-312)||(18556385-18556535)
chr1 (234-335)||(36878417-36878519)
chr1 (233-299)||(37598825-37598890)
chr1 (234-299)||(1815250-1815315)
chr1 (162-293)||(25361885-25362012)
chr1 (233-293)||(51410023-51410084)
chr1 (234-318)||(2896122-2896206)
chr1 (232-292)||(6332671-6332730)
chr1 (233-293)||(31672895-31672955)
chr1 (233-299)||(9103633-9103698)
chr1 (234-292)||(18190109-18190167)
chr1 (255-293)||(23738677-23738715)
chr1 (235-293)||(32434718-32434776)
chr1 (238-291)||(31015044-31015097)
chr1 (255-299)||(12443482-12443526)
chr1 (233-317)||(41877470-41877554)
chr1 (214-282)||(44482240-44482308)
chr1 (223-292)||(17778549-17778615)
chr1 (257-299)||(1262877-1262919)
chr1 (163-285)||(6414932-6415053)
chr1 (245-299)||(16297295-16297349)
chr1 (255-293)||(34298435-34298473)
chr1 (255-299)||(9033029-9033074)
chr1 (255-284)||(9449030-9449059)
chr1 (258-299)||(10572614-10572655)
chr1 (216-273)||(15449215-15449272)
chr1 (192-285)||(27471525-27471618)
chr1 (259-324)||(30359356-30359421)
chr1 (229-289)||(2283669-2283729)
chr1 (226-274)||(28663626-28663674)
chr1 (252-316)||(38743014-38743078)
[»] chr2 (42 HSPs)
chr2 (164-318)||(15657838-15657992)
chr2 (162-285)||(30717459-30717582)
chr2 (233-318)||(19536397-19536483)
chr2 (161-283)||(37419752-37419874)
chr2 (233-317)||(30335392-30335476)
chr2 (232-319)||(20539673-20539760)
chr2 (239-317)||(12940941-12941019)
chr2 (232-314)||(36756343-36756425)
chr2 (234-336)||(18841014-18841116)
chr2 (233-335)||(30404850-30404952)
chr2 (162-299)||(26769504-26769641)
chr2 (163-285)||(44860327-44860449)
chr2 (232-293)||(974746-974807)
chr2 (233-314)||(15972851-15972932)
chr2 (233-314)||(18421941-18422022)
chr2 (240-312)||(21374706-21374778)
chr2 (233-292)||(2438719-2438778)
chr2 (232-299)||(12668422-12668489)
chr2 (233-312)||(37558957-37559036)
chr2 (162-292)||(11223793-11223922)
chr2 (232-317)||(23058441-23058527)
chr2 (215-299)||(4882678-4882762)
chr2 (258-314)||(11670733-11670789)
chr2 (233-313)||(20473301-20473381)
chr2 (233-316)||(21624242-21624326)
chr2 (255-319)||(21782840-21782904)
chr2 (233-334)||(38117159-38117261)
chr2 (255-317)||(28412325-28412387)
chr2 (255-299)||(24894382-24894426)
chr2 (161-292)||(4207857-4207987)
chr2 (162-277)||(32749754-32749869)
chr2 (232-299)||(33153417-33153484)
chr2 (162-277)||(35056883-35056998)
chr2 (202-316)||(15349816-15349930)
chr2 (255-317)||(21616737-21616799)
chr2 (255-285)||(28677916-28677946)
chr2 (169-226)||(5040789-5040846)
chr2 (233-290)||(38442309-38442366)
chr2 (240-297)||(39323259-39323316)
chr2 (234-293)||(14996224-14996284)
chr2 (233-317)||(20242727-20242811)
chr2 (259-335)||(36409653-36409729)
[»] chr7 (61 HSPs)
chr7 (162-318)||(24339616-24339772)
chr7 (234-377)||(13300320-13300468)
chr7 (162-299)||(25822648-25822785)
chr7 (215-293)||(9408316-9408394)
chr7 (162-319)||(43027404-43027555)
chr7 (164-285)||(26033392-26033513)
chr7 (161-292)||(9778500-9778625)
chr7 (232-317)||(32094019-32094105)
chr7 (162-284)||(2334256-2334379)
chr7 (232-293)||(3991323-3991384)
chr7 (161-285)||(5409770-5409888)
chr7 (163-292)||(11665370-11665499)
chr7 (232-312)||(18215185-18215265)
chr7 (181-299)||(11831425-11831543)
chr7 (232-318)||(27945015-27945101)
chr7 (233-306)||(25481888-25481961)
chr7 (161-293)||(7438705-7438837)
chr7 (233-293)||(8234145-8234205)
chr7 (170-318)||(13770665-13770807)
chr7 (234-314)||(11061077-11061157)
chr7 (216-293)||(11272569-11272648)
chr7 (233-317)||(26733279-26733363)
chr7 (257-301)||(35861955-35861999)
chr7 (215-274)||(21560521-21560580)
chr7 (233-324)||(24105646-24105737)
chr7 (255-317)||(21826248-21826310)
chr7 (263-333)||(28401102-28401172)
chr7 (174-289)||(7058429-7058542)
chr7 (232-316)||(7328690-7328774)
chr7 (214-334)||(15902780-15902900)
chr7 (233-311)||(7197297-7197375)
chr7 (205-319)||(26329354-26329468)
chr7 (246-316)||(29763187-29763257)
chr7 (232-284)||(18039006-18039059)
chr7 (231-292)||(19992001-19992062)
chr7 (257-317)||(19206025-19206085)
chr7 (233-285)||(21880159-21880211)
chr7 (255-311)||(29787391-29787447)
chr7 (259-299)||(41020489-41020529)
chr7 (162-316)||(1433430-1433578)
chr7 (214-293)||(4024026-4024105)
chr7 (263-318)||(4793837-4793892)
chr7 (232-319)||(5235959-5236046)
chr7 (255-318)||(22868016-22868079)
chr7 (233-300)||(28155562-28155629)
chr7 (234-317)||(33994187-33994270)
chr7 (259-317)||(5307235-5307293)
chr7 (256-318)||(11722121-11722183)
chr7 (245-318)||(13557753-13557829)
chr7 (237-299)||(40287361-40287422)
chr7 (232-317)||(6028600-6028685)
chr7 (162-211)||(30813867-30813916)
chr7 (162-226)||(598263-598327)
chr7 (225-317)||(2034416-2034508)
chr7 (255-299)||(9933268-9933312)
chr7 (259-335)||(10042894-10042970)
chr7 (233-285)||(19213810-19213862)
chr7 (255-299)||(21141004-21141048)
chr7 (255-299)||(32308113-32308157)
chr7 (259-299)||(42720916-42720956)
chr7 (264-316)||(48246844-48246896)
[»] chr4 (47 HSPs)
chr4 (161-299)||(24613629-24613767)
chr4 (162-318)||(23292926-23293071)
chr4 (161-317)||(19482643-19482799)
chr4 (163-285)||(30982808-30982930)
chr4 (214-299)||(4383361-4383445)
chr4 (233-334)||(12797338-12797438)
chr4 (233-318)||(21945477-21945562)
chr4 (163-318)||(847925-848080)
chr4 (233-335)||(49430982-49431085)
chr4 (233-292)||(54580023-54580082)
chr4 (163-318)||(3947702-3947851)
chr4 (214-317)||(27706158-27706261)
chr4 (255-317)||(11651156-11651218)
chr4 (162-314)||(12895214-12895355)
chr4 (235-285)||(29205451-29205501)
chr4 (234-316)||(47263962-47264044)
chr4 (232-285)||(11596351-11596404)
chr4 (232-312)||(30298926-30299007)
chr4 (232-312)||(30327794-30327875)
chr4 (245-318)||(40481611-40481683)
chr4 (233-285)||(8423718-8423770)
chr4 (255-319)||(14126133-14126197)
chr4 (233-285)||(28964248-28964300)
chr4 (234-318)||(35157986-35158070)
chr4 (232-299)||(12895115-12895182)
chr4 (232-318)||(28084495-28084582)
chr4 (162-284)||(903930-904052)
chr4 (164-274)||(19312353-19312463)
chr4 (234-318)||(752934-753019)
chr4 (248-317)||(5832709-5832778)
chr4 (235-284)||(6485613-6485662)
chr4 (234-317)||(715608-715692)
chr4 (233-293)||(2361975-2362035)
chr4 (218-317)||(12708121-12708221)
chr4 (233-293)||(38847012-38847072)
chr4 (233-292)||(4157150-4157208)
chr4 (161-299)||(22234818-22234957)
chr4 (256-291)||(32273549-32273584)
chr4 (255-318)||(36635298-36635361)
chr4 (233-299)||(42640519-42640588)
chr4 (257-291)||(14465099-14465133)
chr4 (233-291)||(16073396-16073453)
chr4 (233-323)||(34306804-34306893)
chr4 (214-292)||(51701258-51701336)
chr4 (255-312)||(40179658-40179715)
chr4 (236-336)||(24543941-24544038)
chr4 (259-299)||(50280874-50280914)
[»] chr3 (56 HSPs)
chr3 (162-318)||(15796223-15796379)
chr3 (161-299)||(14209106-14209244)
chr3 (162-299)||(34185052-34185189)
chr3 (161-318)||(41961578-41961735)
chr3 (161-299)||(28812508-28812646)
chr3 (171-299)||(4987229-4987357)
chr3 (218-299)||(34910310-34910391)
chr3 (255-337)||(14979136-14979218)
chr3 (170-316)||(15999958-16000099)
chr3 (170-318)||(11665918-11666066)
chr3 (255-318)||(3164047-3164110)
chr3 (236-335)||(26508067-26508166)
chr3 (233-299)||(10954945-10955011)
chr3 (163-317)||(14216867-14217021)
chr3 (163-317)||(14222996-14223150)
chr3 (232-318)||(28917975-28918061)
chr3 (233-314)||(55401053-55401134)
chr3 (217-292)||(1509539-1509614)
chr3 (155-293)||(27505245-27505377)
chr3 (233-335)||(26492205-26492307)
chr3 (233-318)||(8587021-8587106)
chr3 (233-318)||(10335286-10335371)
chr3 (235-299)||(20503458-20503522)
chr3 (232-292)||(21256985-21257045)
chr3 (215-318)||(14829664-14829766)
chr3 (192-299)||(14832092-14832199)
chr3 (233-292)||(51206353-51206412)
chr3 (205-299)||(750590-750684)
chr3 (233-319)||(8383230-8383316)
chr3 (233-299)||(21479111-21479177)
chr3 (232-285)||(49651785-49651838)
chr3 (259-318)||(25064883-25064942)
chr3 (239-318)||(35994744-35994822)
chr3 (257-335)||(40052295-40052367)
chr3 (255-313)||(11493383-11493441)
chr3 (233-299)||(18426942-18427008)
chr3 (252-293)||(8412964-8413005)
chr3 (234-299)||(10268487-10268552)
chr3 (240-285)||(11610528-11610573)
chr3 (232-285)||(25948886-25948939)
chr3 (233-285)||(7928457-7928509)
chr3 (233-292)||(8593136-8593196)
chr3 (255-299)||(23870581-23870625)
chr3 (233-284)||(25775516-25775568)
chr3 (233-285)||(38731225-38731277)
chr3 (216-318)||(3610607-3610710)
chr3 (232-299)||(39756229-39756296)
chr3 (234-312)||(22774071-22774149)
chr3 (257-299)||(41319334-41319376)
chr3 (257-318)||(5441055-5441116)
chr3 (218-291)||(17005604-17005677)
chr3 (233-318)||(25093476-25093561)
chr3 (233-293)||(7614415-7614475)
chr3 (162-226)||(11252031-11252095)
chr3 (255-299)||(12704000-12704044)
chr3 (232-299)||(14747554-14747622)
[»] scaffold0027 (1 HSPs)
scaffold0027 (233-318)||(46656-46741)
[»] scaffold0003 (1 HSPs)
scaffold0003 (162-318)||(241568-241724)
[»] scaffold0450 (1 HSPs)
scaffold0450 (162-293)||(8564-8695)
[»] scaffold0223 (1 HSPs)
scaffold0223 (232-318)||(20146-20232)
[»] scaffold0136 (1 HSPs)
scaffold0136 (161-317)||(3777-3933)
[»] scaffold0011 (1 HSPs)
scaffold0011 (234-306)||(17750-17822)
[»] scaffold0036 (1 HSPs)
scaffold0036 (164-286)||(9678-9800)
[»] scaffold0044 (1 HSPs)
scaffold0044 (170-283)||(53189-53302)
[»] scaffold0019 (1 HSPs)
scaffold0019 (161-299)||(71716-71856)
[»] scaffold0018 (1 HSPs)
scaffold0018 (234-318)||(178819-178904)
[»] scaffold0361 (1 HSPs)
scaffold0361 (245-299)||(14523-14577)
[»] scaffold0021 (1 HSPs)
scaffold0021 (236-318)||(130456-130538)
[»] scaffold0103 (1 HSPs)
scaffold0103 (245-333)||(51769-51858)
[»] scaffold0053 (1 HSPs)
scaffold0053 (233-318)||(8772-8857)
[»] scaffold0086 (1 HSPs)
scaffold0086 (170-274)||(2946-3050)
[»] scaffold0306 (1 HSPs)
scaffold0306 (233-312)||(13380-13459)
[»] scaffold0152 (1 HSPs)
scaffold0152 (233-312)||(21868-21947)
[»] scaffold0085 (1 HSPs)
scaffold0085 (257-312)||(26373-26428)
[»] scaffold0008 (1 HSPs)
scaffold0008 (164-319)||(263303-263458)
[»] scaffold0171 (2 HSPs)
scaffold0171 (232-318)||(23394-23480)
scaffold0171 (204-318)||(23484-23599)
[»] scaffold0246 (1 HSPs)
scaffold0246 (245-318)||(19550-19622)
[»] scaffold0722 (1 HSPs)
scaffold0722 (233-297)||(7032-7096)
[»] scaffold0652 (1 HSPs)
scaffold0652 (233-285)||(462-514)
[»] scaffold0050 (1 HSPs)
scaffold0050 (233-336)||(70233-70337)
[»] scaffold0004 (1 HSPs)
scaffold0004 (216-280)||(83172-83236)
[»] scaffold0122 (2 HSPs)
scaffold0122 (219-318)||(8640-8739)
scaffold0122 (233-299)||(8003-8068)
[»] scaffold0066 (1 HSPs)
scaffold0066 (245-299)||(33375-33429)
[»] scaffold0793 (1 HSPs)
scaffold0793 (234-318)||(4884-4969)
[»] scaffold0025 (1 HSPs)
scaffold0025 (232-284)||(23777-23830)
[»] scaffold0227 (1 HSPs)
scaffold0227 (259-299)||(7337-7377)
[»] scaffold0020 (1 HSPs)
scaffold0020 (232-314)||(135311-135393)
[»] scaffold0049 (1 HSPs)
scaffold0049 (234-314)||(63750-63831)
[»] scaffold0022 (1 HSPs)
scaffold0022 (234-319)||(90816-90901)


Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 13 - 289
Target Start/End: Complemental strand, 40131900 - 40131624
Alignment:
Q  13 tttggagttgacccctgcagtggaaaaggaaaatggaatgtttctgatagtagaaaaggctttgagagtgctgtgatttgtaattgttcattcaaccaca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40131900 tttggagttgacccctgcagtggaaaaggaaaatggaatgtttctgatagtagaaaaggctttgagagtgctgtgatttgtaattgttcattcaaccaca 40131801  T
Q  113 attcttcttgccatgttgtaagcatgtacgtactgccttctcttctttcctatgaaacacggacactccttggagtagacgtgttccgatgtcggacaca 212  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  40131800 attcttcttgccatgttgtaagcatgtacggactgccttctcttctttcctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacaca 40131701  T
Q  213 agtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgt 289  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  40131700 agtcgtgtctgacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgt 40131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 21522872 - 21522724
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||| ||||| ||| ||||| ||| || |||||||  |||||||| |||| ||| |||||||||||| |||||| || |||||||||||| ||    
T  21522872 cacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttat 21522773  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||| |||||||||| ||||||| ||||| | |||| |||||||||||    
T  21522772 tttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 21522724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 21533438 - 21533290
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||| ||||| ||| ||||| ||| || |||||||  |||||||| |||| ||| |||||||||||| |||||| || |||||||||||| ||    
T  21533438 cacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttat 21533339  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||| |||||||||| ||||||| ||||| | |||| |||||||||||    
T  21533338 tttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 21533290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 170 - 317
Target Start/End: Complemental strand, 21542152 - 21542005
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    |||||||| |||||||| | | ||||| ||| ||||||||||  |||||||| |||| ||| |||||||||||| |||||| || |||||||||||| ||    
T  21542152 cacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttat 21542053  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
     |||| |||||||||||||||||| | ||| | |||||||||||||||    
T  21542052 ctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtc 21542005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 39698671 - 39698541
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||| |||||  || ||||||| ||| |||||||| |||| ||| ||||||| |||| |||||| || |||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  262 tatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||||||||||||||| ||||||    
T  39698571 tatgtgattttttcaaattattagctgtgtc 39698541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 13287398 - 13287484
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||| |||||  || ||||||||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||||    
T  13287398 acgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtcc 13287484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 21191056 - 21191141
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||| | ||| | |||| |||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtcc 21191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 337
Target Start/End: Complemental strand, 41633799 - 41633690
Alignment:
Q  228 cgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctg 327  Q
    ||||||||||||||||||||||| || |||||||||||| | |||||||||||||||| |||||||  |||| | | ||||||| |||||| ||| | ||    
T  41633799 cgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccgtattcgtg 41633700  T
Q  328 cttcataggt 337  Q
     |||||||||    
T  41633699 tttcataggt 41633690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 7677835 - 7677704
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||| ||| ||||| ||| ||| ||||| ||| |||||||||   | |||||| |||| ||| |||||||||||| || ||| |  |||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaat 7677736  T
Q  262 tatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||||||||||||||| |||||||    
T  7677735 tatgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 30183639 - 30183548
Alignment:
Q  202 tgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||  ||||||||||| | | | |||||||||||| |||||| ||||| |||| ||||||| |||||||||||||||||||||||    
T  30183639 tgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcg 30183548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 6247681 - 6247615
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgt 6247615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 10298633 - 10298555
Alignment:
Q  228 cgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtc 306  Q
    |||||||||||||||| |||||| || | || ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  10298633 cgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtc 10298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 19579834 - 19579700
Alignment:
Q  159 ttcctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactg 258  Q
    |||| |||||||||| |||||||| ||| ||| ||||| ||| |||  |||| | |||||||| ||||  || |||||||||||| |||||| |  |||     
T  19579834 ttccaatgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcacta 19579735  T
Q  259 aattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||||| |||||||||||| |||||||    
T  19579734 aattatgtgattttctcaaattattagctgtgtcg 19579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 41995546 - 41995444
Alignment:
Q  215 tcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||| |||| ||||||| |||||||| ||  || || | ||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||    
T  41995546 tcgtgtccgacaccgatacggcaccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T
Q  315 gtcca 319  Q
     ||||    
T  41995448 atcca 41995444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 15382538 - 15382451
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatttttt--caaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || |||||||||| |||||||||  ||||||||||| ||||||| ||||| |||||| |||||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 15382451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 285
Target Start/End: Complemental strand, 3966632 - 3966510
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||||| ||| ||||||||| ||  ||| ||||||| || ||||| ||||  || ||||||||||||  | ||| || ||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  263 atgtgattttttcaaattattag 285  Q
     ||||||||| ||||||||||||    
T  3966532 gtgtgattttctcaaattattag 3966510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 31084447 - 31084316
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||| | ||| ||  ||||||||||  |||||||| ||||      ||||| ||||| |||||| || | |||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgaca------cgacatcgacacttgtaattacattgaat 31084354  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  31084353 tatgtgattttttcaaattattagctgtgtcggcgtgt 31084316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 33178084 - 33178018
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||| || ||| |||||||||||||||| |||||||||||||||||| |||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 21351889 - 21351965
Alignment:
Q  217 gtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||| |||| ||| | |||||||||| |||||| || |||||||||||||| |||||| |||||||||||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcg 21351965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 42893418 - 42893359
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||| |||||| || |||| |||||||||||||||||||||||||| |||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcg 42893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  238 ccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||| |||||| || ||| ||||||||||||||||||||||||||| ||||||| ||||| | |||| |||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 21576745 - 21576803
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||| ||||| |||||| || ||||||||||||||||||||||||||||||| |||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 8420086 - 8420013
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtc 306  Q
    ||||||||||| |||||| || | |||||||||| |||||||||||||||||| | ||||| ||||| ||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtc 8420013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 15405062 - 15405140
Alignment:
Q  240 gacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccat 320  Q
    |||| |||||| || | |||||||| |||||||||||||||||||||||||||   |||||| |||| |||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtc--agtgttagtgtccgtgtcgtgtccat 15405140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 30135372 - 30135287
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgatttttt-caaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||| |||||| || | ||| |||||||||||||| ||||||||||||||||||| |||||   | ||||||||||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc 30135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 293
Target Start/End: Original strand, 37328774 - 37328904
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||| ||| ||  ||| | ||| | |||||| ||  ||||||| |||| ||| ||||||||||||  ||||| || ||||||    
T  37328774 cctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgca--tcgtgtccgacaccgacacgacaccgacacatgtaattacactgaa 37328871  T
Q  261 ttatgtgattttttcaaattattagttgtgtcg 293  Q
    || |||||||||| ||||||||| | |||||||    
T  37328872 ttttgtgatttttacaaattatttgctgtgtcg 37328904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 316
Target Start/End: Original strand, 19552476 - 19552626
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||||||||||||||||| ||| |||  |||| |   |||||||||  | |  ||||||||| ||| |||||| ||||| || ||  || ||| |||    
T  19552476 ctatgaaacacggacactcctcggattaggtgtgtccaagtgtcggacaacact--tgtctgacaccgacacgacatcgacacttata--tacacttaat 19552571  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||||||||||||||||||||||  ||||||| ||||| | |||| |||||||||    
T  19552572 tatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 7218271 - 7218333
Alignment:
Q  237 accgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||| |||||| || ||||||||||||||||| || |||||||||| | |||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtgt 7218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 18316856 - 18316985
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||  ||||| ||||||||||| | ||||||| | | ||||| |  |||||| | |||||||| | |||| ||| || ||   |||    
T  18316856 tatgaagcacggacactatttggattagacgtgttctggtgtcggaaatatgtcgttttcgacatcaacacgacacc-atatttataattataccatatt 18316954  T
Q  263 atgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| ||||||||||||||||||    
T  18316955 atgtgattttttaaaattattagttgtgtcg 18316985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 22423802 - 22423871
Alignment:
Q  223 gacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||| ||| ||||||||||||| | ||| || | |||||||||||||||| ||||||||||||| |||||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtc 22423871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 318
Target Start/End: Original strand, 24906305 - 24906386
Alignment:
Q  237 accgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||| |||||| || |||||||||||| |||||||||||||||||  ||||| | ||||| | |||  |||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtcc 24906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 5894832 - 5894892
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||| |||||  || | | |||||| |||||||||||||||||||||||||||    
T  5894832 acgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 6072339 - 6072415
Alignment:
Q  259 aattatgtgatt-ttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcata 334  Q
    |||||||||||| |||| |||||||||||| ||||| ||||| | | || || |||||||||||||| |||||||||    
T  6072339 aattatgtgattgttttaaaattattagttatgtcggcgtgtcagtatccgtatcgtgtccatatccgtgcttcata 6072415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 12160007 - 12159951
Alignment:
Q  237 accgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||||| || | | ||||||||| |||||| ||||||||||||||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtcg 12159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 43001856 - 43001780
Alignment:
Q  236 caccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||| ||| |||||| || |||||||||||| ||||||||||||||||||  |||||||| ||| | |||| |||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 22013447 - 22013388
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||| |||||| ||||||||||| ||||||| ||||| | |||| |||||||||||    
T  22013447 aattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22013388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 40000557 - 40000616
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||||||||||||||||||||||   |||||||| ||| | |||| |||||||    
T  40000557 actgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 337
Target Start/End: Complemental strand, 2436956 - 2436876
Alignment:
Q  258 gaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc--gtgtccatatccctgcttcataggt 337  Q
    |||||||||||||||| |||||||||||  |||||| ||||| | |||| |||||  |||||| ||||| ||||||||||||    
T  2436956 gaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc-gtgtccggtgtccgtatccgtgcttcataggt 2436876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 4105306 - 4105213
Alignment:
Q  245 ttgtaactaaactgaattatgtgat--tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc-atatccctgcttcatag 335  Q
    |||||| || |||||||||||||||  |||||||||||||||||| ||||| ||||| | | || ||||| |||||  ||||| ||||||||||    
T  4105306 ttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgtgcttcatag 4105213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 22611761 - 22611803
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||||||||  |||||| |||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgtgt 22611803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 28588674 - 28588775
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttca 332  Q
    |||||||||||  | ||| || |||||||||||||||||| |||||||||||   |||||| ||||| | ||| | |||||||||| ||| | |||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtcaatgt-tatgtcgtgtccgtattcgtgcttca 28588772  T
Q  333 tag 335  Q
    |||    
T  28588773 tag 28588775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 3751958 - 3752014
Alignment:
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||| |||||||||||| ||||||||| ||||| |||  |||||||||||    
T  3751958 ttatgtgattttctcaaattattag-tgtgtcgacttgttagtgttcgtgtcgtgtcc 3752014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 6770580 - 6770543
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||||||||| | |||||||||||||||||    
T  6770580 actgaattatgtgattttcttaaattattagttgtgtc 6770543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 12641749 - 12641660
Alignment:
Q  217 gtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtc 306  Q
    |||||||||| | | ||||||| ||||  || || || ||| |||||||||||||||| |||||||||  | ||||||||||| ||||||    
T  12641749 gtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgtcattgtc 12641660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatttttt 274  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 27932294 - 27932229
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtg 298  Q
    ||||||| | |||||||| || |||||||||||| ||||| ||||||||||||  |||||| ||||    
T  27932294 cgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 17177025 - 17177081
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||||| |||||| || | |||||| | |||||||||||||||||||| |||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgt 17177081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 26716178 - 26716118
Alignment:
Q  258 gaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||||| ||||||||||||  |||||| | ||| | ||||| ||||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtcc 26716118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 26985918 - 26985858
Alignment:
Q  258 gaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||||| ||||||||||||  |||||| | ||| | ||||| ||||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtcc 26985858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 31264475 - 31264431
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| ||||| ||||||||||| ||||||||| ||||    
T  31264475 actgaattatgtcattttctcaaattattacttgtgtcgatgtgt 31264431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 36642731 - 36642847
Alignment:
Q  202 tgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgtta 301  Q
    ||||||||||  |||||||| |||| | | | |||||||||| || ||  || ||| || ||||| | |||||||||||||||  ||||||| ||||| |    
T  36642731 tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtca 36642830  T
Q  302 ttgtctgtgtcgtgtcc 318  Q
     |||| |||||||||||    
T  36642831 gtgtccgtgtcgtgtcc 36642847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 38464388 - 38464424
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  38464388 tgaataatgtgattttctcaaattattagttgtgtcg 38464424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 22652106 - 22651950
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||||||||| ||| ||||||||||| |||||||| |||| ||| |||||||||||| |||||| || | |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||||||||| ||||||| ||||| | |||| |||||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22651950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 29510232 - 29510389
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||| ||| |||  |||| ||| ||||||||||  |||||||| |||| ||| || ||||||||| |||||| || ||||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaa 29510331  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    || |||||||||||||||||||||| ||||||| ||||| | |||| |||||||||||    
T  29510332 ttttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 29510389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 163 - 299
Target Start/End: Original strand, 29447040 - 29447176
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||||| ||| ||| ||||| | | |||| |||||| |||||||| |||| ||| | |||||||||| |||||  || | ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||| ||||||||||||||||||||||||||    
T  29447140 atgtgattttctcaaattattagttgtgtcgacgtgt 29447176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 4673353 - 4673510
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||| ||||||||||||| ||| ||||||||| ||||||| |   |||||||| |||||| | | ||||| || | |||||| || ||||||    
T  4673353 cctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaa 4673452  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    || | |||||||||||||||||||  ||||||| ||||| | ||||||||||||||||    
T  4673453 ttttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc 4673510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 299
Target Start/End: Original strand, 15816058 - 15816195
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||| || ||| ||| ||||| ||| |||||||  |  |||||||| |||| | | |||||||||||| || ||| || ||| |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||||||||||| |||||    
T  15816158 tatgtgattttttcaaattattagttgtgtcggcgtgt 15816195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 2572027 - 2572122
Alignment:
Q  204 tcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||  |||||||| ||||  || |||||||||||| |||||| || ||| ||||||||||||||||||||||||||| |||||||||||||    
T  2572027 tcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgt 2572122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 22197670 - 22197827
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatac-gacaccgacatttgtaactaaactga 259  Q
    ||||| || |||||||||||||  || ||| |||| |||| ||||||||||  ||| |||| |||| ||| || ||||| |||| |||||| || ||| |    
T  22197670 cctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaa 22197768  T
Q  260 attatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||| |||||||||||||||| ||||| | ||||||| ||||||||||||||||    
T  22197769 attatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtcc 22197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 28745628 - 28745472
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||||| | ||||| |||  || || ||||||   |||||||| |||| ||| |||||| |||||||||||  || | |||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaat 28745529  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||| ||||||||||||||||  ||||||| || | ||| || |||||||||||    
T  28745528 tatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtcc 28745472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 8343447 - 8343290
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||| ||||||| | ||| ||| ||||| ||| ||||||||||  |||||||| ||||    |||||||| |||| |||||| || ||| ||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaa 8343348  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||||||||||||||| | |||||  ||||   |||| |||||||||||    
T  8343347 ttatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtcc 8343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 20873128 - 20873027
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttca 332  Q
    ||||||||||| |||||| || ||| ||||||||||||||||||||||||||  | ||||| ||||| | |||| ||||||||||| ||| | |||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgcttca 20873029  T
Q  333 ta 334  Q
    ||    
T  20873028 ta 20873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 4298887 - 4298971
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||| |||||| || | | ||||||||||||||||||||||||||  ||||||| ||||||| | ||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc 4298971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 25566901 - 25566841
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||    
T  25566901 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 335
Target Start/End: Original strand, 27067231 - 27067403
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| |||||||  |||| |||  |||||| |||||||| |||| ||| ||||||| |||| |||||| || |  ||||    
T  27067231 ctatgaagcacggacactcctcggattagacgt--tccggtgttcgacacatgtcgtgtccgacaccgacacgacactgacacttgtaattaca--gaat 27067326  T
Q  262 tatgtgattttttcaaattattagttgtgtcgac---gtgttattgtctgtgtcgtgtccatatccctgcttcatag 335  Q
    ||||| ||||| |||||| |||||| |||||| |   |||| | || ||||||||||||| ||||| ||||||||||    
T  27067327 tatgtaattttctcaaatcattagtggtgtcggcagtgtgtcagtgactgtgtcgtgtccgtatccgtgcttcatag 27067403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 36450754 - 36450833
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    ||||||| ||| |||||| || |||||||| |||||||||||||||||||||||||||||| ||||| | |||| |||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 4948711 - 4948657
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagtt 287  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 11927015 - 11927137
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||| | ||| ||| |||||  |||||| ||| ||| ||||||| ||||| | | ||||||||||||  | ||| || |||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaat 11927114  T
Q  262 tatgtgattttttcaaattatta 284  Q
    ||||||||||| |||||||||||    
T  11927115 tatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 315
Target Start/End: Original strand, 18170482 - 18170564
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtg 315  Q
    |||||||||||||||||| || | |||||||||| ||||||||||||| ||| |||||||| ||||| | |||| ||||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 315
Target Start/End: Original strand, 18634050 - 18634132
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtg 315  Q
    |||||||||||||||||| || | |||||||||| ||||||||||||| ||| |||||||| ||||| | |||| ||||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 301
Target Start/End: Complemental strand, 11944795 - 11944656
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||| |||||| | ||| ||| |||||  || ||||||| ||| ||||||| ||||||| | ||||||||||||  | ||| || ||||| |    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagt 11944696  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgtta 301  Q
    ||||||||||| |||||||||||   |||||| |||||||    
T  11944695 tatgtgattttatcaaattattaacagtgtcggcgtgtta 11944656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 269
Target Start/End: Complemental strand, 29447574 - 29447467
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||||||  || ||||| ||| ||| ||||||||||| ||||||||||||| ||| |||||||| |||  | ||| || ||| |||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaat 29447475  T
Q  262 tatgtgat 269  Q
    ||||||||    
T  29447474 tatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 316
Target Start/End: Complemental strand, 36934705 - 36934646
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| |||| |||||||||    
T  36934705 tgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 8343033 - 8342979
Alignment:
Q  231 tacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||||| |||||| || ||| |||||||||||||||||||||||||||    
T  8343033 tacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 8342979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 41838145 - 41838207
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| | |||| || |||||||    
T  41838145 actgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 14134757 - 14134692
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| | ||| || |||||||||||||||||| |||||||||||||  |||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgt 14134692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 335
Target Start/End: Complemental strand, 22596053 - 22595950
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc--gtgtccatatccctgctt 330  Q
    ||||||| ||| |||||| || |||||||||||| ||||||| |||||||||| ||||||| ||||| | ||| ||||||  |||||| ||||| |||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt-tgtgtccggtgtccgtatccgtgctt 22595955  T
Q  331 catag 335  Q
    |||||    
T  22595954 catag 22595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 13436954 - 13437030
Alignment:
Q  223 gacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||| ||| |||||||||||| |||| | ||   ||||||||||||||||||||||||||||| ||||||| |||||    
T  13436954 gacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgt 13437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 25192350 - 25192432
Alignment:
Q  236 caccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||| || ||| || |||||||||||| | |||||||||||||||| ||||||| ||||| | |||| || ||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtcc 25192432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 24669492 - 24669407
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || |||||||||||| ||||  |||||||||||   |||||  ||||| | ||||||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtcc 24669407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 24613579 - 24613520
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||| |||||| || ||| ||||||||||| ||||||||||||||| |||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcg 24613520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 30077387 - 30077439
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||| |||| |||||| || ||||||||||||||| |||||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 34897122 - 34897078
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||    
T  34897122 actgaattatgtgattttctcaaattattagcggtgtcgacgtgt 34897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattatt 283  Q
    ||||||||| |||||| || |||||||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 3677820 - 3677761
Alignment:
Q  258 gaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| | | || ||||||||||    
T  3677820 gaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtc 3677761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 4122186 - 4122313
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||| ||||| ||||||||||||| ||||  ||||  ||||||| |||||| || || |||||||||  | ||| || | |||||||| | ||    
T  4122186 cacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgtttgacattgacacaacaccgacacatataattacaatgaattatataat 4122285  T
Q  270 tttttcaaattattagttgtgtcgacgt 297  Q
    ||| || |||||||| |  |||||||||    
T  4122286 tttatctaattattaatgatgtcgacgt 4122313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 17468507 - 17468570
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgac 295  Q
    |||||||| ||| |||||| || || | |||||||||||||| ||||||||| |||||||||||    
T  17468507 acgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtcgac 17468570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 20679396 - 20679471
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgt 309  Q
    |||||||||| || ||| || |||||| ||||||||||| ||||||||||||  |||||||| ||| | |||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 24196628 - 24196663
Alignment:
Q  264 tgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||||||||| |||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgt 24196663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 316
Target Start/End: Original strand, 24727790 - 24727837
Alignment:
Q  269 ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||||||||||||||||||||| ||||||| | ||| ||||||||||    
T  24727790 ttttttcaaattattagttgtgttgacgtgtcagtgtatgtgtcgtgt 24727837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 29776073 - 29775994
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcata 334  Q
    ||||||||| |||||||| ||||||||||||  |||||||| ||| | |||| |||||||| || ||| | |||||||||    
T  29776073 actgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtgaccgtattcgtgcttcata 29775994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 30271290 - 30271357
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||| | || |||||| || |||| |||||||||||||||||||| ||||| ||||||| |||||    
T  30271290 acgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgt 30271357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 5813651 - 5813585
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||  || ||| || ||||||| |||||||||||||||| ||||||| |||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 5813585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 18407772 - 18407718
Alignment:
Q  239 cgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||| |||||| || ||||||||||||||||||||  ||||||||| |||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcg 18407718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 21465490 - 21465412
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||| ||||  || |||||||| ||| |||||| || |  ||||||| |||||||||||||||||||| ||||||    
T  21465490 gtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 41831962 - 41832000
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  41831962 actgaattatgtgattttttcaaattattaactgtgtcg 41832000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 31514909 - 31514872
Alignment:
Q  256 ctgaattatgtgatttttt-caaattattagttgtgtc 292  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31514909 ctgaattatgtgatttttttcaaattattagttgtgtc 31514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 31557054 - 31556990
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||| | |||||| || ||||||||||||||| ||||||||||||||  ||||||| |||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgt 31556990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 3951476 - 3951540
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgaca 226  Q
    ||||||| |||||| |||||||||| ||| ||||||||  |||| |||||  |||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgaca 3951540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 27101548 - 27101508
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||||||  |||||| |||||    
T  27101548 aattatgtgattttttcaaattattagcggtgtcggcgtgt 27101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 35519833 - 35519865
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||||||||||||||||||||||| |||||    
T  35519833 aattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 162 - 318
Target Start/End: Original strand, 9107299 - 9107455
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||| ||||||| ||| |||  |||| ||| ||||||||||| || ||||| |||| ||| |||||||||||| |||||| || |||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    | |||||||||||||||||||||| ||||||| ||||||| |||| |||||||||||    
T  9107399 tttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtcc 9107455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 8365447 - 8365603
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||||| |||||| ||| ||| ||||| ||  ||||||||||  |||||||| || | ||| |||||||||||| |||||| || || |||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 8365546  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||| ||||||||||||||||||||||| ||||| | |||| ||||||||||    
T  8365547 ttatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 16766827 - 16766671
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||| || | ||| ||| ||||| ||| ||||||||||  || ||||| |||| ||| |||||||||||| |||||| || |||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||  ||||||||||    
T  16766727 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtcc 16766671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 10770673 - 10770778
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttc 331  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| | ||||| | ||||  |||||||||| ||||| ||||||    
T  10770673 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccgtatccgtgcttc 10770772  T
Q  332 ataggt 337  Q
    ||||||    
T  10770773 ataggt 10770778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 34595193 - 34595108
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtcc 34595108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 16833365 - 16833267
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcat 333  Q
    ||||||||| |||||| || |||||| |||||||||||||||||||||||||||||||| ||||| | |||||||||||||||| ||||  ||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccgtatcagtgcttcat 16833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 192 - 299
Target Start/End: Original strand, 5970067 - 5970174
Alignment:
Q  192 cgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||| ||||||||||| |   |||||||| |||| ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||  |||||    
T  5970067 cgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgt 5970166  T
Q  292 cgacgtgt 299  Q
    ||||||||    
T  5970167 cgacgtgt 5970174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 289
Target Start/End: Complemental strand, 31385048 - 31384923
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||||||||| ||| ||||| ||| ||| ||||||  ||||||||  ||| | | ||||||| |||| |||||| || ||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatt 31384950  T
Q  263 atgtgattttttcaaattattagttgt 289  Q
    |||||||||||||||||||||||||||    
T  31384949 atgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 8714098 - 8713972
Alignment:
Q  174 gacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgatt-tt 272  Q
    ||||||||| ||| | | ||||| ||||||||||| |   |||||||| |||| ||| |||||||| |||||||||| || |||||||||||||||| ||    
T  8714098 gacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttt 8713999  T
Q  273 ttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||||  |||||||||||||    
T  8713998 ttcaaattattaactgtgtcgacgtgt 8713972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 1681811 - 1681734
Alignment:
Q  239 cgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||| |||||| || ||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgt 1681734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 8776973 - 8777058
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||| ||| |||||| || |||||||| |||||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  8776973 cgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8777058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 7801156 - 7801224
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgtta 301  Q
    ||||||||||| |||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgtta 7801224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||| |||||| || | |||||| ||| |||||||||||||||||||||||||||||||||| |||| |||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 17302687 - 17302556
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    |||||||||||||||| || ||||| |||  |||||||||||||||||||  || |||||| | |  || ||||||  |||| |||||| || | |||||    
T  17302687 ctatgaaacacggacattctttggattaggtgtgttccgatgtcggacacgtgttgtgtctaatactgacacgacaatgacacttgtaattacattgaat 17302588  T
Q  262 tatgtga-ttttttcaaattattagttgtgtc 292  Q
    ||||||| ||||||||||||||||||||||||    
T  17302587 tatgtgatttttttcaaattattagttgtgtc 17302556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 12696384 - 12696298
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||| |||| |||||| || |||||||||||| |||||||||||||||||| ||||||| ||||| | |||| |||||||||||    
T  12696384 acgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 12696298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 24645539 - 24645464
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgatt-ttttcaaattattagttgtgtcgacgtgttattgtctg 308  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||| | ||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtcgacatgtcagtgtctg 24645464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 853859 - 853925
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||| |  ||| ||||||||||||||||||||||||||||||||||| |||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgt 853925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 319
Target Start/End: Original strand, 7977830 - 7977916
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    ||||||||||| |||||| || |||||||||||| |||||||||||||||||| ||||||| ||||| | | ||  |||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtcca 7977916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 426514 - 426599
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || | | ||||||||||||||||||||||||||  ||||||| ||||| | |||| |||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtcc 426599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 17841589 - 17841668
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||| || |||||| || ||| ||||||||||||||||||||||||||| ||||||| ||||| | |||| |||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 334
Target Start/End: Complemental strand, 28152157 - 28152062
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttca 332  Q
    ||||||||||| |||||| || ||||||||||||||| ||||||||||||||| | ||||| ||||| | ||||     ||||||||||||| |||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtc-----cgtgtccatatccgtgcttca 28152064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 318
Target Start/End: Complemental strand, 7938174 - 7938090
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||| || ||| || ||| |||||| |||||||||||||||||||| ||||||| ||||| | ||||  ||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtcc 7938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 28715354 - 28715302
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||| |||||| || |||||||||||| ||||||||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 28715302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 9522981 - 9522898
Alignment:
Q  202 tgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||  ||||  || |||| ||| || ||||||||| |||||| || |||||||||||||||||||| ||||||||||    
T  9522981 tgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 319
Target Start/End: Complemental strand, 9629513 - 9629356
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatac-gacaccgacatttgtaactaaactgaa 260  Q
    ||||||| || |||||||||| ||| |||||||||  |  ||||||||||| || ||||| |||| ||| || ||||||||||  | ||| || | ||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgaca-cgacaccgacaccgacacatataattacattgaa 9629415  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||||||||||| |||||||||| |  |||||| ||||| | | || ||||||||||||    
T  9629414 ttatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcca 9629356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 17435303 - 17435177
Alignment:
Q  188 tagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagtt 287  Q
    ||||||||| ||  ||||| ||||  |||||||| |||||||| |  ||||  ||| |||||| || |||||||||||| ||||||| |||||||||| |    
T  17435303 tagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaattatgtaattttttaaaattattagct 17435204  T
Q  288 gtgtcgacgtgttattgtctgtgtcgt 314  Q
     ||||||||| | | |||| |||||||    
T  17435203 atgtcgacgtatcagtgtccgtgtcgt 17435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 299
Target Start/End: Complemental strand, 18367967 - 18367829
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||||||||||||||||  || ||||| ||  |||| ||||   ||||||||||||| ||| ||||||||||||  | ||| || |||| |    
T  18367967 cctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgca 18367868  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    || ||||||||| | |||  ||||| ||||||| |||||    
T  18367867 ttttgtgattttctaaaaaaattagctgtgtcggcgtgt 18367829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 314
Target Start/End: Original strand, 25038030 - 25038152
Alignment:
Q  192 cgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||| | ||||||||||  |||||||| |||| | | || | |||||||||||||| || ||| |||||||| ||||| |||||||||||   ||||    
T  25038030 cgtgttctggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgt 25038129  T
Q  292 cgacgtgttattgtctgtgtcgt 314  Q
    | |||||| | | ||||||||||    
T  25038130 caacgtgtcagtatctgtgtcgt 25038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 293
Target Start/End: Complemental strand, 4040598 - 4040465
Alignment:
Q  160 tcctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactga 259  Q
    |||||||||||| ||||||| ||| || ||   ||||| || ||| ||| ||  ||||||||||| ||||| ||||| ||||||| | ||| || |||||    
T  4040598 tcctatgaaacatggacacttcttagattaagtgtgtttcggtgttggatacgtgtcgtgtctgatatcgagacgacgccgacatatataattatactga 4040499  T
Q  260 attatgtgattttttcaaattattagttgtgtcg 293  Q
    || ||| |||||| | ||||||||||| ||||||    
T  4040498 ataatgcgattttcttaaattattagtggtgtcg 4040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 4878002 - 4877941
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcg 293  Q
    ||||||||||| |||||| || ||| |||||||||| ||||||||||||||||| |||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcg 4877941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 7930365 - 7930304
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| ||| || |  ||| |||||||||||||||||||||||||| ||||||||    
T  7930365 acgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcg 7930304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 25010225 - 25010262
Alignment:
Q  256 ctgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||||||||||||||||||||| |||||||    
T  25010225 ctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 31959213 - 31959152
Alignment:
Q  238 ccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||| |||||| || |||| |||||||||||||||||||||||||| |||| || |||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgt 31959152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 32978842 - 32978966
Alignment:
Q  165 tgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattat 264  Q
    |||| ||||||||||||||||| ||||||||| ||| |||||||||   ||||||||           ||||||||||| |||||| || ||| ||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtc-----------cgacaccgacacttgtaattacacttaattat 32978930  T
Q  265 gtgatttt-ttcaaattattagttgtgtcgacgtgt 299  Q
    ||| |||| ||||||||||||| ||||||| |||||    
T  32978931 gtgttttttttcaaattattagctgtgtcggcgtgt 32978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 34225831 - 34225868
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  34225831 actgaattatgcgattttttcaaattattagttgtgtc 34225868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 316
Target Start/End: Complemental strand, 3398678 - 3398595
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||||||||| | || ||| || |||||||||| |||||||| ||||||||||| ||||||| ||||| | |||| |||||||||    
T  3398678 acgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 7248488 - 7248364
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| | ||||||| ||| ||||||||||| || |||||  ||| ||| ||||| || |||  | ||| ||  ||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 7248389  T
Q  262 tatgtgattttttcaaattattagt 286  Q
    ||||||||||  ||| |||||||||    
T  7248388 tatgtgatttcctcagattattagt 7248364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 9911527 - 9911587
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattt-tttcaaattattagttgtgt 291  Q
    |||||||||||| |||||| || ||||||||||||||||| ||| |||||||||| |||||    
T  9911527 acgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 13360394 - 13360438
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||    
T  13360394 actgaattatgtgattttctcaaattactagtggtgtcgacgtgt 13360438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 24115846 - 24115906
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||| |||| | ||| || | |||||||||||||||||| |||||||||||||||||    
T  24115846 acgacaccaacatatataattatattgaattatgtgattttttgaaattattagttgtgtc 24115906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattatta 284  Q
    ||||||||||| |||||  || ||| ||||||||||||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 3209441 - 3209374
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatttttt-caaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| ||||||  | ||| |||||||||||||||| ||||||||||| ||||||| |||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgt 3209374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 5000557 - 5000692
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    ||||| |||| |||||| | ||| ||||||||| | | ||||||| |   ||||||||||||| ||| | ||||| ||||| |  || || ||||||| |    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 5000656  T
Q  264 tgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||| || |||||||||  ||||||||||||    
T  5000657 tgtgattttctcgaattattagcggtgtcgacgtgt 5000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 33001315 - 33001374
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||| | |||| ||||||    
T  33001315 aattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtcc 33001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 34073278 - 34073399
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| | | |||| |||| ||| |||||| |||| |||||||  |||| ||| |||||||||||   | ||| || |||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaat 34073375  T
Q  262 tatgtgattttttcaaattattag 285  Q
    |||| |||||| ||||||||||||    
T  34073376 tatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 1191706 - 1191760
Alignment:
Q  239 cgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||| |||||| || |||||||| ||||| |||||||||||||||| |||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcg 1191760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 7086828 - 7086770
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||| ||||||||||||  ||| ||||||||   |||||||||||||||    
T  7086828 aattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 8805598 - 8805656
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||| ||||||||||||  ||| ||||||||   |||||||||||||||    
T  8805598 aattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 9027238 - 9027152
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||  | ||| || || ||||||||||||| | ||||||||||||  |||||| ||||| | |||| |||||||||||    
T  9027238 acgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 9027152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 9195727 - 9195821
Alignment:
Q  206 ggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgtt 300  Q
    ||||||| |||||||| |||| | | ||||||||||||  | ||| || ||| |||||||| ||||| ||||||||||||  ||||||| |||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgtt 9195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 9658916 - 9658854
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||||| | ||||||||||  |||||| ||||| | |||| ||||||||||    
T  9658916 actgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 9025493 - 9025546
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||||  | ||| || |||||||||||||||||| ||||||||||||    
T  9025493 acgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 281
Target Start/End: Original strand, 10339053 - 10339174
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaa-actga 259  Q
    |||||||| |||||||||||||  || ||| ||||| ||  |||||||||   |||||||| |||| ||| ||| ||| ||||  | ||| ||| |||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactga 10339152  T
Q  260 attatgtgattttttcaaatta 281  Q
    ||||||||||||| ||||||||    
T  10339153 attatgtgattttctcaaatta 10339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 13851773 - 13851712
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||||||| || ||||| ||||||||||||  |||||||||||| | |||| |||||||||    
T  13851773 actgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 25096477 - 25096416
Alignment:
Q  238 ccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||| ||||| || |||  ||||||||||||| ||||||||||||| |||||| |||||    
T  25096477 ccgacatatgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgt 25096416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 1532277 - 1532214
Alignment:
Q  255 actgaattatgtgattttttcaaattatta--gttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||||||||||| ||||| |||||||||||  | ||||||||||||| | ||| ||||||||||    
T  1532277 actgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgt 1532214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 285
Target Start/End: Complemental strand, 2117111 - 2117083
Alignment:
Q  257 tgaattatgtgattttttcaaattattag 285  Q
    |||||||||||||||||||||||||||||    
T  2117111 tgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 6898281 - 6898333
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||| |||||| || ||| |||||||| |||| |||||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 7265593 - 7265645
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||||||  | ||| || |||||||||||||||||| ||||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattag 7265645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 300
Target Start/End: Original strand, 8931589 - 8931669
Alignment:
Q  220 tctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgtt 300  Q
    ||||||| ||| |||||| |||||  | ||| || |||||||||||| ||||| ||||||| |||| ||||||| ||||||    
T  8931589 tctgacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgtt 8931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 10827557 - 10827617
Alignment:
Q  229 gatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgt 289  Q
    |||||||||| || |||||||| || |||   ||||||||||| |||||||||||||||||    
T  10827557 gatacgacactgatatttgtaattacactatgttatgtgatttcttcaaattattagttgt 10827617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 10842565 - 10842525
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||||||  |||||| |||||    
T  10842565 aattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 16388255 - 16388283
Alignment:
Q  255 actgaattatgtgattttttcaaattatt 283  Q
    |||||||||||||||||||||||||||||    
T  16388255 actgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 19040389 - 19040345
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||| ||||||||||||  |||||| |||||    
T  19040389 actgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 19044501 - 19044457
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||||||| || ||||||||||||| |||||| |||||    
T  19044501 actgaattatgtgatattctcaaattattagtcgtgtcggcgtgt 19044457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 27904037 - 27904077
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgatttttt 274  Q
    ||||||||||||||||| || ||||||||||||| ||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttt 27904077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgatttttt 274  Q
    |||||| |||||||||| || ||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 162 - 317
Target Start/End: Complemental strand, 47989627 - 47989473
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||| ||||| |||||||| ||||   |||||||| |||| ||| |||||||||||| |||||| || |||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||||||| ||||||||| |||||||| ||||| | |||||||||||||||    
T  47989527 tatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtc 47989473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 174 - 318
Target Start/End: Original strand, 6612112 - 6612256
Alignment:
Q  174 gacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttt 273  Q
    ||||||||||||| ||| ||||| | | |||||||||||  ||||||| |||||||| |||||||||||| |||||| || |||||||||||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt 6612211  T
Q  274 tcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||  ||| ||| ||||| |||||| |||||||||||    
T  6612212 tcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtcc 6612256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 299
Target Start/End: Complemental strand, 9828175 - 9828037
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||| ||| ||||||||| ||| ||||||||||  |||||||||||||  || ||||||||||||  |  || || ||||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaa 9828076  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| ||||||||||||| |||||| |||||    
T  9828075 ttatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 336
Target Start/End: Original strand, 28273069 - 28273191
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcg 313  Q
    |||||||| |||||||||| |||||||||| |||||| || |||||||||| |||||||||||||| ||||||||||||  | ||| | ||||  ||||     
T  28273069 gtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtca 28273168  T
Q  314 tgtccatatccctgcttcatagg 336  Q
    ||||| ||||| |||||||||||    
T  28273169 tgtccgtatccgtgcttcatagg 28273191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 170 - 335
Target Start/End: Original strand, 9629837 - 9630002
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    |||||||||| ||||||  |||||||| ||| |||||||||   |||||||| |||||||| |||||||||||| || |||  | |||||||||| ||||    
T  9629837 cacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgat 9629936  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcatag 335  Q
    ||| ||||||||||||  ||||||| ||||   ||||  ||||||| || ||||| ||||||||||    
T  9629937 tttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtggccgtatccgtgcttcatag 9630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 5944413 - 5944255
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||| |||||||| ||| ||| ||| | ||| |||||||||   || ||||| | |||||| |||||||||||| || ||| || |||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  262 tatgtgatt--ttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||  ||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  5944313 tatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtcc 5944255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 318
Target Start/End: Complemental strand, 40917880 - 40917725
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||||||| |||| ||| ||| ||||| ||| ||||||||||  ||||||||  ||| ||| |||||||||| | |||||| || ||| ||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaa 40917781  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||  ||||||||||||||||||||| ||||||| ||||| | | || |||||||||||    
T  40917780 tt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtcc 40917725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 24577185 - 24577245
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  24577185 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 238 - 338
Target Start/End: Original strand, 48450592 - 48450692
Alignment:
Q  238 ccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcataggt 337  Q
    |||||| |||||| || ||| |||||||| |||||||||||||||||| ||||| | ||||| | |||| ||||||||||| ||||| ||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccgtatccatgcttcataggt 48450691  T
Q  338 c 338  Q
    |    
T  48450692 c 48450692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 297
Target Start/End: Original strand, 31694638 - 31694776
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||||||||||||  || ||| ||||||||| ||||| | |   || ||||| |||| ||| |||||||||||| |||||| || ||||||    
T  31694638 cctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 31694737  T
Q  261 ttatgtga--ttttttcaaattattagttgtgtcgacgt 297  Q
    ||||||||  ||||||||||||||||| | |||||||||    
T  31694738 ttatgtgattttttttcaaattattagctatgtcgacgt 31694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 309
Target Start/End: Original strand, 32461393 - 32461539
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||| |||||| ||| ||||| ||  |||| |||||  |||||||| |||| ||| || ||||| ||| |||||| || | | |||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaat 32461491  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgt 309  Q
    ||||||||||||||||||||||||||||| || ||||| | |||||||    
T  32461492 tatgtgattttttcaaattattagttgtgccggcgtgtcactgtctgt 32461539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 318
Target Start/End: Original strand, 5376483 - 5376585
Alignment:
Q  216 cgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtg 315  Q
    |||||| |||||||| |||||||||||| || ||| || |||||||||||| ||||| | ||||||||||  |||||| ||||||| |||| ||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtg 5376582  T
Q  316 tcc 318  Q
    |||    
T  5376583 tcc 5376585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 22881616 - 22881682
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||| |||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgt 22881682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 38078661 - 38078727
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||| || | ||||||||||||||||||||||||||||| |||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgt 38078727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 292
Target Start/End: Original strand, 1486646 - 1486768
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    ||||| ||| ||||||||| ||| ||| ||||| ||| ||||||||||  |||||||| ||||      ||||||||||| || ||| || |||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgaca------cgacaccgacacttataattacactgaatta 1486739  T
Q  264 tgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||||||||||||| ||||||    
T  1486740 tgtgattttttcaaattattagctgtgtc 1486768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 337
Target Start/End: Original strand, 14359529 - 14359625
Alignment:
Q  240 gacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcataggt 337  Q
    |||| |||||| || ||| |||||||||||||| |||||||||||| ||||||| |||||   |||||||||||||||| ||||| ||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccgtatccgtgcttcataggt 14359625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 336
Target Start/End: Original strand, 19058856 - 19058960
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt-tattgtctgtgtcgtgtccatatccctgcttc 331  Q
    ||||||||||| |||||| || |||||||||||| || |||| |||||||||| ||||||| |||||  | ||| |||||||||||| ||||| ||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccgtatccgtgcttc 19058955  T
Q  332 atagg 336  Q
    |||||    
T  19058956 atagg 19058960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 113359 - 113292
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||| ||| |||||| || ||||||||||||||||||||||||||||||| ||||||| |||||    
T  113359 acgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 40258934 - 40258993
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||| ||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcg 40258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 1704991 - 1705052
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| |||||| ||  |||||||||||||||||||||||||||||| |||||||    
T  1704991 acgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcg 1705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 18471355 - 18471276
Alignment:
Q  237 accgacatttgtaactaaactgaattatgtgatttttt--caaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||| |||||| || ||||||||||||||||||||  ||||||||||| |||||||||| || |||||| |||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgt 18471276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 323
Target Start/End: Complemental strand, 21378635 - 21378547
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatc 323  Q
    ||||||||| |||||| || |||||||||||| |||||||||| ||||||| |||||||  ||||   |||| ||||||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtccatatc 21378547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 398787 - 398850
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||||||||||||||||  |||||| ||||| | |||| |||||||||||    
T  398787 actgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 398850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 5898288 - 5898371
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcataggtc 338  Q
    |||||||||||||||||||||| ||||||||  |||||| ||| | | |||||||||| ||||| ||||| |||| ||||||||    
T  5898288 actgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccgtatccgtgctacataggtc 5898371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 7918233 - 7918296
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||| |||||||||||||  ||||  ||||| ||||||||||||||||||    
T  7918233 actgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtcc 7918296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 250
Target Start/End: Complemental strand, 21032335 - 21032248
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaa 250  Q
    |||||| ||| ||||||||||||| ||| ||| |  |||||||||||||| |||||||| |||| | | |||||||||||||||||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaa 21032248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 22515887 - 22515946
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| |||||| || ||| ||||||||||||||||||||||||||| ||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 42359449 - 42359508
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| |||||| || |||||||| |||||||||||||||||||||| ||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtc 42359508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 46348383 - 46348462
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    ||||||||||| |||||| || ||| |||||| |||||||||||||||||||| ||||||| ||||| | |||| |||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 293
Target Start/End: Complemental strand, 6427596 - 6427460
Alignment:
Q  160 tcctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactga 259  Q
    ||||||||| ||||||||||| |  || ||| ||||| ||| ||||||||||  |||||||| |||  | | ||||||| |||| |||||  || | |||    
T  6427596 tcctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattga 6427497  T
Q  260 attatgtgatt---ttttcaaattattagttgtgtcg 293  Q
    |||||||||||   |||||||||||||||||||||||    
T  6427496 attatgtgatttttttttcaaattattagttgtgtcg 6427460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 316
Target Start/End: Original strand, 16927186 - 16927268
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||||| |||| | ||| || |||||||||| |||||||||||||||||||| | || |||||||| | ||||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattatt 283  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 312
Target Start/End: Original strand, 18556385 - 18556535
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||| || ||| ||| ||||| ||  ||||||| ||  |||| |||||||| ||  |||||||| | | |||||| || | | |||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||| ||||||||||||||| ||||||| ||||| | |||| |||||    
T  18556485 tatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 335
Target Start/End: Complemental strand, 36878519 - 36878417
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgt-cgtgtccatatccctgcttca 332  Q
    ||||||||||  | ||| || |||||||||||||||||| ||||||||||||  |||||| ||||| | ||||| ||| ||||||| ||||| |||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtgcttca 36878420  T
Q  333 tag 335  Q
    |||    
T  36878419 tag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 37598890 - 37598825
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||||||||||||||||| |||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgt 37598825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 1815315 - 1815250
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||| |||||| || |||||||||||||||||||| |||| |||| |||||||| |||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt 1815250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 25362012 - 25361885
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||| | ||| |||  |||||||| |||||||||   |||||||| |||| ||| ||||||| ||||  | ||| || |||||||    
T  25362012 ctatgaagcacggacactcttcggattag--gtgttccggtgtcggacat--gtcgtgtccgacaccgacacgacactgacacatataattacactgaat 25361917  T
Q  262 tatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||| ||||||||| ||| ||||||    
T  25361916 tatgtgattttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 51410084 - 51410023
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatt-ttttcaaattattagttgtgtcg 293  Q
    ||||||||||| |||||| || |||||||||||||||| ||||||||||||||| |||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcg 51410023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 2896122 - 2896206
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| | || ||| |||||||||||||||||| ||||||||||||  |||||| ||||| | |||| |||| ||||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtcc 2896206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 6332730 - 6332671
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||| | |||||| || ||||||||||||||| ||||||||||||||||||||||    
T  6332730 acgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 31672895 - 31672955
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||| | |||||| || ||||||||| ||||||||||||||||||||| |||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcg 31672955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 9103698 - 9103633
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||  |||||| ||||||||||||||||||||||||||  ||||||| |||||    
T  9103698 cgacaccgacacttgtat-taaactaaattatgtgattttttcaaattattaactgtgtcggcgtgt 9103633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 18190109 - 18190167
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||| ||||| |||||| || |||||||||||| |||||||||||||||||| ||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 23738715 - 23738677
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  23738715 actgaattatgtgattttttcaaattattagctgtgtcg 23738677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 32434718 - 32434776
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||| |||| |||||| || | |||||||||||| ||||||||||||||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcg 32434776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 31015097 - 31015044
Alignment:
Q  238 ccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    |||||| |||||| || |||||||||||||||||| |||||||||||| |||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 12443482 - 12443526
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||    
T  12443482 actgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 41877470 - 41877554
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||||| |||||| || ||| |||||||| ||||| ||||||||||||  |||||| |||   | |||||||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtc 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 282
Target Start/End: Complemental strand, 44482308 - 44482240
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattat 282  Q
    |||||||| |||| ||| ||||||||||||  | ||| || |||||||||||||||||| |||||||||    
T  44482308 gtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 17778615 - 17778549
Alignment:
Q  223 gacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||| ||| |||||||||||| |||||| || ||||   |||||||||||||||||||||||| ||||||    
T  17778615 gacaccgacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 1262919 - 1262877
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||| |||||||||||| ||||||| |||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgt 1262877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 6414932 - 6415053
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||||| |||  | | ||||  || |||| |||||  |||||||| |||||||| | ||||||||||  | ||| ||||||| |||    
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatt 6415030  T
Q  263 atgtgattttttcaaattattag 285  Q
    |||||||||| |||||| |||||    
T  6415031 atgtgattttctcaaataattag 6415053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 16297295 - 16297349
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||| || |||||||| ||||||||||||| |||||| | |||||||||||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgt 16297349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 34298473 - 34298435
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  34298473 actgaattatgtgattttctcaaattattagtggtgtcg 34298435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 9033029 - 9033074
Alignment:
Q  255 actgaattatgtgatttt-ttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||    
T  9033029 actgaattatgtgatttttttcaaattattagtggtgttgacgtgt 9033074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 9449030 - 9449059
Alignment:
Q  255 actgaattatgtgattttttcaaattatta 284  Q
    ||||||||||||||||||||||||||||||    
T  9449030 actgaattatgtgattttttcaaattatta 9449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 10572614 - 10572655
Alignment:
Q  258 gaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||||||| ||||||||||||| |||||| |||||    
T  10572614 gaattatgtgattttctcaaattattagtggtgtcggcgtgt 10572655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 15449215 - 15449272
Alignment:
Q  216 cgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttt 273  Q
    |||||| |||| ||||||||||| |||| |||||| || ||| |||||||||||||||    
T  15449215 cgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 285
Target Start/End: Original strand, 27471525 - 27471618
Alignment:
Q  192 cgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||| ||| ||||||||||  ||||| ||  ||| ||||| |||||| |||  ||||| || ||||||||||||| |||| ||||||||||||    
T  27471525 cgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 30359421 - 30359356
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatcc 324  Q
    |||||||||||||||||||||||| ||||||| ||  |||| | |||||||  ||||||| |||||    
T  30359421 aattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtctgtcccgtgtccgtatcc 30359356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 2283729 - 2283669
Alignment:
Q  229 gatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgt 289  Q
    ||||||||||| ||| || ||| || | ||||| |||||||||||||||||||| ||||||    
T  2283729 gatacgacaccaacacttataattacattgaatcatgtgattttttcaaattataagttgt 2283669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 28663674 - 28663626
Alignment:
Q  226 atcgatacgacaccgacatttgtaactaaactgaattatgtgatttttt 274  Q
    |||||||||||||||||| |||||| || |  |||||||||||||||||    
T  28663674 atcgatacgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 38743014 - 38743078
Alignment:
Q  252 taaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||||||||| |||||| ||||| ||||| ||||  || ||||||||||| ||| ||||||||||    
T  38743014 taaactgaataatgtgacttttttaaattgttagcggtatcgacgtgttaatgtttgtgtcgtgt 38743078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 5e-32; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 15657992 - 15657838
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    ||||| || |||||||||| ||| ||| ||||| |||  |||||||||  |||| ||| |||||| | ||||||||||||||||||| || |||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  264 tgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||| |||||||||||||| |||| ||||||| |||| |||||||||||    
T  15657892 tgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtcc 15657838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 30717459 - 30717582
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||||||| ||| ||| | ||  ||||| ||||  |||||||| |||| ||| |||||| ||||| |||||| || |||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  262 tatgtgattttttcaaattattag 285  Q
    ||||||||||||||||||||||||    
T  30717559 tatgtgattttttcaaattattag 30717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 19536397 - 19536483
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatttt-ttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtcc 19536483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 37419874 - 37419752
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||   ||||||| |||| ||| ||||||||| || |||||| || ||||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaa 37419775  T
Q  261 ttatgtgattttttcaaattatt 283  Q
    || ||||||||||||||||||||    
T  37419774 ttttgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 30335476 - 30335392
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||||| || ||| |||||||| |||||||||||||||||||||||||| |||| || |||| ||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 232 - 319
Target Start/End: Original strand, 20539673 - 20539760
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||||||||||| |||||| || ||| |||||| |||||||||||||||||||| ||||||||||||| | |||| ||||||||||||    
T  20539673 acgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtcca 20539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 12940941 - 12941019
Alignment:
Q  239 cgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||| || |||||||||| ||||||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 36756343 - 36756425
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    |||||||||||| || ||| || |||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||    
T  36756343 acgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 336
Target Start/End: Original strand, 18841014 - 18841116
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcat 333  Q
    |||||||||| |||||| || ||| |||||||| |||||||||||||||||||||||||  ||||| | ||||  |||||||||| ||| | ||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccgtatacgtgcttcat 18841113  T
Q  334 agg 336  Q
    |||    
T  18841114 agg 18841116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 30404850 - 30404952
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttca 332  Q
    |||| |||||| |||||| || ||||||||||||||||||||||||||||||   |||||| ||||| | |||| ||||| ||||| ||||| |||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccgtatccgtgcttca 30404949  T
Q  333 tag 335  Q
    |||    
T  30404950 tag 30404952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 26769641 - 26769504
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||| ||||| ||  ||||||||||  |||||||| || | ||| | |||||||||| |||||| || ||   ||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccagat 26769542  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
     ||||||| ||||||||||||||||||||||| |||||    
T  26769541 aatgtgatattttcaaattattagttgtgtcggcgtgt 26769504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 285
Target Start/End: Complemental strand, 44860449 - 44860327
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||||| | | |||  |||| ||||||||||||||| ||||||||  ||| | | ||||||||||||  | ||| || ||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  263 atgtgattttttcaaattattag 285  Q
    ||| |||||| ||||||||||||    
T  44860349 atgcgattttctcaaattattag 44860327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 974807 - 974746
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| |||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  974807 acgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 15972932 - 15972851
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||| |||||| || |||||||| ||| ||||||||||||||||| |||||||| ||||| | |||| |||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 18422022 - 18421941
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||| |||||| || ||||||||||||||| |||| ||||||||| |||||||| ||||| | |||| |||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 18421941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 21374706 - 21374778
Alignment:
Q  240 gacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||| |||||| || |||||||||||| |||||||||||||||||| ||||||| ||||||| |||| |||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 2438719 - 2438778
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| |||||| || |||||||||||||||||||| |||||||||| ||||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 12668422 - 12668489
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| || ||| || |||||||||||| |||||||||||||||||||| ||||| |||||    
T  12668422 acgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 37559036 - 37558957
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    ||||||||||| |||||| || | ||||||||||||||||| ||||||||||| ||||||| ||||| | |||| |||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 292
Target Start/End: Original strand, 11223793 - 11223922
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||||||  || ||| ||||| ||| |||| ||||   |||||||| |||| | | | |||||||||| |||||| || |||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagacagt-gtcgtgtccgacacctacatgacaccgacacttgtaattacactgaat 11223891  T
Q  262 tatgtgattttttcaaattattagttgtgtc 292  Q
    ||||| ||||||||||| |||||| ||||||    
T  11223892 tatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 23058441 - 23058527
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||| |||||| || |||| ||||||||| |||||||||||||||| |||||| | ||||| | |||| ||||||||||    
T  23058441 acgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtc 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 299
Target Start/End: Original strand, 4882678 - 4882762
Alignment:
Q  215 tcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| ||| |||||| ||||| |||||| || |||||||||| | |||||||||||| |||||  || |||||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgt 4882762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 11670789 - 11670733
Alignment:
Q  258 gaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||||||||||||||||||||| | |||||||||| | ||||| ||||||    
T  11670789 gaattatgtgattttttcaaattattagtggcgtcgacgtgtcagtgtctatgtcgt 11670733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 313
Target Start/End: Complemental strand, 20473381 - 20473301
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcg 313  Q
    ||||| ||||| |||||| || |||||||||| ||| ||||| |||||||||||||||||| | ||| | |||||||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtcg 20473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 21624326 - 21624242
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaa-ttattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||||||||| |||||| || |||||||||||  ||||||| ||| ||||||| ||||||| ||||| | ||||||||||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgt 21624242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 21782840 - 21782904
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||||||||||||||||| ||||||||||||  |||||| ||||| | ||| |||||||||||||    
T  21782840 actgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtcca 21782904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 38117159 - 38117261
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc--gtgtccatatccctgctt 330  Q
    ||||||| ||| |||||| || || ||| |||||||||||||||||||||||| ||||||| ||||| | |||| |||||  |||||| ||||| |||||    
T  38117159 cgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccggtgtccgtatccgtgctt 38117257  T
Q  331 cata 334  Q
    ||||    
T  38117258 cata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 28412387 - 28412325
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||||| |||||||||||   |||| ||||||||| |||| ||||||||||    
T  28412387 actgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtc 28412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 24894426 - 24894382
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||    
T  24894426 actgaattatgtgatttttttaaattattagctgtgtcggcgtgt 24894382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 292
Target Start/End: Complemental strand, 4207987 - 4207857
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    ||||||||||| | |||||| | ||| || ||||||| || ||||| ||||  |||||||| |||| ||| |||| |||||||  | ||| || ||| ||    
T  4207987 cctatgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaa 4207889  T
Q  261 ttatgtgattttttcaaattattagttgtgtc 292  Q
    ||||| | |||||||||||||||||| |||||    
T  4207888 ttatgcgcttttttcaaattattagtggtgtc 4207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 32749754 - 32749869
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| | |||||||||||| ||  || ||||| ||  ||||||||||| |||  ||| |||||||| ||||||| |||| || | | || |||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaat 32749853  T
Q  262 tatgtgattttttcaa 277  Q
    ||||||||||| ||||    
T  32749854 tatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 33153484 - 33153417
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||| |||| |||||| || |||||||||||||||||||| |||| ||||| ||| ||| |||||    
T  33153484 acgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgt 33153417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 35056998 - 35056883
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||||||  || ||| |||||| |  ||||||||||  |||||||| |||| ||| ||||||||||||  | ||| || |||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T
Q  262 tatgtgattttttcaa 277  Q
    ||| || |||| ||||    
T  35056898 tatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 15349930 - 15349816
Alignment:
Q  202 tgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgtta 301  Q
    ||||||||||  || |||| |||| | ||||||| | ||| |||| ||| || | | |||||||||||||||| |||||| ||   || ||||||||| |    
T  15349930 tgtcggacacgtgttgtgtttgacgttgatacgatatcgatatttataattatattaaattatgtgatttttttaaattactaacagtatcgacgtgtca 15349831  T
Q  302 ttgtctgtgtcgtgt 316  Q
    |||||||||||||||    
T  15349830 ttgtctgtgtcgtgt 15349816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 21616799 - 21616737
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||||| ||||||||||||  |||||| |||||   |||| ||||||||||    
T  21616799 actgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 285
Target Start/End: Complemental strand, 28677946 - 28677916
Alignment:
Q  255 actgaattatgtgattttttcaaattattag 285  Q
    |||||||||||||||||||||||||||||||    
T  28677946 actgaattatgtgattttttcaaattattag 28677916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 5040846 - 5040789
Alignment:
Q  169 acacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgaca 226  Q
    |||||||||||||||||| ||| ||||| |||  |||||||||| |||||||| ||||    
T  5040846 acacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgaca 5040789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 38442366 - 38442309
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtg 290  Q
    ||||||||||| || ||| || | |||||||||||||||||| |||| ||||||||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg 38442309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Complemental strand, 39323316 - 39323259
Alignment:
Q  240 gacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgt 297  Q
    |||| |||||| || |||||||||||| ||||| ||||||||||||  ||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgt 39323259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 14996224 - 14996284
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgatttt-ttcaaattattagttgtgtcg 293  Q
    |||||||||| |||||| || ||| |||||| ||||||| ||||||||||||| |||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcg 14996284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 20242727 - 20242811
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||  | ||| || |||||||||||||||||| | |||  ||||||||||||| ||||| | ||||  |||||||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 36409653 - 36409729
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcatag 335  Q
    |||||||||||||||||||||||| ||  |||||| | ||| | | || ||||||||||  ||||| ||||||||||    
T  36409653 aattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctgtatccgtgcttcatag 36409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 24339772 - 24339616
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||| ||||||| ||| ||| ||||| ||| ||||||| ||  |||||||| |||| ||| |||||||||||| |||||| || |||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||  ||||||||||    
T  24339672 tatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtcc 24339616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 234 - 377
Target Start/End: Complemental strand, 13300468 - 13300320
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcga----cgtgttattgtctgtgtc-gtgtccatatccctgc 328  Q
    |||||||| | | |||| || |||||||||| |||||||||||||||||||||| ||||      |||||  |  || ||||| |||| |||||||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtcagtatccgtgtcgtgttcggtgtccgtgttcatatccctgc 13300369  T
Q  329 ttcataggtctagaataaggattatatagaaagaatatgatatctatat 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13300368 ttcataggtctagaataaggattatatagaaagaatatgatatctatat 13300320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 299
Target Start/End: Complemental strand, 25822785 - 25822648
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    |||||||||||||||||||||| || ||| | ||| |||||||| |||||  |||||||| || | |||||||||||||||| |||||| || |||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaat 25822686  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    | ||   ||||||||||||||||||||||||| |||||    
T  25822685 tgtgattttttttcaaattattagttgtgtcggcgtgt 25822648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 9408316 - 9408394
Alignment:
Q  215 tcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| |||||||||||||||| |||||| || ||| |||||||||||||||||||||||||| ||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcg 9408394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 162 - 319
Target Start/End: Original strand, 43027404 - 43027555
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||| | ||| ||| ||||| ||| ||||||||||  |||||||||||||      ||||||||||| |||||  || |||| ||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgaca------cgacaccgacacttgtatttacactgcat 43027497  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||||||||||||||||||||||| || |||| ||||| | |||| ||||||||||||    
T  43027498 tatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcca 43027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 26033392 - 26033513
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    ||||||||||||||||||| ||| |||  ||||  || | ||||||||  ||| ||||||||| ||| |||| ||||||| |||||| || |||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  264 tgtgattttttcaaattattag 285  Q
    ||||||||||||||||||||||    
T  26033492 tgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 161 - 292
Target Start/End: Complemental strand, 9778625 - 9778500
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||||||| ||| ||||| ||| ||||||||||  || ||||| ||||      ||||||||||| |||||| || ||||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgaca------cgacaccgacacttgtaattatactgaa 9778532  T
Q  261 ttatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||||||||||||||||| || ||||||    
T  9778531 ttatgtgattttttcaaattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 32094019 - 32094105
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| | | ||||| ||| |||||||||||    
T  32094019 acgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtgtc 32094105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 2334379 - 2334256
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||||||||||||||||| ||| |||||||||| |  |||||||||   |||||||| |||| ||| |||||||||||| |||||| || ||| |||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaat 2334281  T
Q  262 tatgtga--ttttttcaaattatta 284  Q
    |||||||  ||||||||||||||||    
T  2334280 tatgtgattttttttcaaattatta 2334256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 3991384 - 3991323
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcg 3991323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 285
Target Start/End: Original strand, 5409770 - 5409888
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||  |||||||| ||||      ||||||||||| |||||| |  ||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgaca------cgacaccgacacttgtaattgcactgaa 5409863  T
Q  261 ttatgtgattttttcaaattattag 285  Q
    |||||||||||||||||||||||||    
T  5409864 ttatgtgattttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 11665370 - 11665499
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| |||||||| |||| | | |||| ||||| || ||||||||||  |||||||  |||| ||| | |||| ||||| || ||| || ||||||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatt 11665469  T
Q  263 atgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||||||||||||||||||||||    
T  11665470 atgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 18215185 - 18215265
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| || |||| ||||||| |||| |||||    
T  18215185 acgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 11831543 - 11831425
Alignment:
Q  181 cttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaatt 280  Q
    |||||| ||| |||| |||| ||||  ||||| |||||||| |||| |||||||||||  | | |||||| || ||| |||||| |||||||||||||||    
T  11831543 cttggattaggcgtgctccggtgtcaaacacatgtcgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaatt 11831444  T
Q  281 attagttgtgtcgacgtgt 299  Q
    |||||||||||||| ||||    
T  11831443 attagttgtgtcgatgtgt 11831425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 27945101 - 27945015
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||| |||||| || |||||||||||| ||||| ||||||||||||| |||||| ||||| | |||| |||||||||||    
T  27945101 acgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtcc 27945015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 25481961 - 25481888
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtc 306  Q
    ||||||| ||| |||||| || ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtc 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 293
Target Start/End: Complemental strand, 7438837 - 7438705
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||||| | ||| ||||| |   ||||| |||   ||||||| ||||| ||| | |||||||||| |||||| || | ||||    
T  7438837 cctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaa 7438738  T
Q  261 ttatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||||||||||||||||  |||||||    
T  7438737 ttatgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 8234205 - 8234145
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcg 8234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 13770807 - 13770665
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||| | ||| ||| ||||||||| ||||||||||  || ||||| ||||      ||||| ||||| |||||| || |||||||||||| ||    
T  13770807 cacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgaca------cgacaacgacacttgtaattacactgaattatgtaat 13770714  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||| |||||||||| ||||||| ||| | | |||| |||||||||||    
T  13770713 ttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 13770665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 11061077 - 11061157
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    |||||||||| |||||| || ||| ||||||||||||||||||||||||||| |||||||  |||| | |||| |||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgt 11061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 293
Target Start/End: Original strand, 11272569 - 11272648
Alignment:
Q  216 cgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattat--gtgattttttcaaattattagttgtgtcg 293  Q
    |||||| |||| ||| |||||||||||| |||||| || ||||||||||  |||||||||||||||||| ||||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcg 11272648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 26733363 - 26733279
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||  | ||| || |||||||||||||||||| ||||||||||||  |||||||||||| | |||| ||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 35861999 - 35861955
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgtta 301  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  35861999 tgaattatgtgattttttcaaattattagttgtgtcggcgtgtta 35861955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 21560580 - 21560521
Alignment:
Q  215 tcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgatttttt 274  Q
    |||||| ||||| |||||||||||||||| |||||| || ||||||||||||||||||||    
T  21560580 tcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 324
Target Start/End: Complemental strand, 24105737 - 24105646
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatcc 324  Q
    |||| |||||| |||||| || ||||||| |||  |||||||||||||||||| ||||||| ||||| | |||| ||||||||||| |||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgtatcc 24105646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 21826310 - 21826248
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||| |||||||||||||| ||||||||||| |||||| ||||||| ||||| |||||||||    
T  21826310 actgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtc 21826248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 28401172 - 28401102
Alignment:
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcat 333  Q
    |||||||||| ||||||||||||| |||||||||||||  || | ||||||||||| ||||| ||||||||    
T  28401172 atgtgattttctcaaattattagtagtgtcgacgtgttggtgcccgtgtcgtgtccgtatccgtgcttcat 28401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 7058542 - 7058429
Alignment:
Q  174 gacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttt 273  Q
    ||||||||||||| ||| |||||  | ||||||||||   || ||||| |  ||||| |||||||| ||| |||||| || |||||||||  ||||||||    
T  7058542 gacactccttggattaggcgtgtgtcaatgtcggacatgtgttgtgtccg--atcgacacgacaccaacacttgtaattacactgaattacatgattttt 7058445  T
Q  274 tcaaattattagttgt 289  Q
    ||||||||||||||||    
T  7058444 tcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 7328690 - 7328774
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||||||||||  | ||| || ||| |||||||| ||||| ||||||||||||  || ||||||||||| ||||||||||||||    
T  7328690 acgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgt 7328774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 334
Target Start/End: Complemental strand, 15902900 - 15902780
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcg 313  Q
    |||||||| || | ||| || |||||||||  | ||| || ||| |||||||||||||| ||||||||||| | |||||| | ||| | |||||||||||    
T  15902900 gtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcg 15902801  T
Q  314 tgtccatatccctgcttcata 334  Q
    ||||| ||| | |||||||||    
T  15902800 tgtccgtattcgtgcttcata 15902780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 7197297 - 7197375
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgt 311  Q
    ||||||||||| |||||| || | |||||||  ||||||||| |||||||||| ||||||| ||||| | |||||||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 26329354 - 26329468
Alignment:
Q  205 cggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattg 304  Q
    |||||||  ||||||||||||| ||| ||||| ||||||  | ||| || |||||||| |||| |||| |||||||||||    ||||| ||||| | ||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  305 tctgtgtcgtgtcca 319  Q
    |||||||||||||||    
T  26329454 tctgtgtcgtgtcca 26329468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 29763187 - 29763257
Alignment:
Q  246 tgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||| |  |||| | ||||| ||||||||    
T  29763187 tgtaactacacttaattatgtgattttttcaaattataagttgtgttggtgtgtcagtgtctatgtcgtgt 29763257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 18039059 - 18039006
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgatt-ttttcaaattatta 284  Q
    |||||||||||| |||||| || |||||||||||||||| ||||||||||||||    
T  18039059 acgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 19992062 - 19992001
Alignment:
Q  231 tacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||||| || ||| || |||||| ||||||||||| |||||||||||| ||||||    
T  19992062 tacgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 19206085 - 19206025
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||| ||||||||||||  |||||| ||||||  |||| ||||||||||    
T  19206085 tgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 21880211 - 21880159
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||| |||||| || |||||||||||| ||||| ||||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 29787391 - 29787447
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgt 311  Q
    |||||||||||||||||| ||||||||||||  |||||| ||||||| |||| ||||    
T  29787391 actgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 41020529 - 41020489
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  41020529 aattatgtgatttttgtaaattattagttgtgtcgacgtgt 41020489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 316
Target Start/End: Complemental strand, 1433578 - 1433430
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||||||||| | | ||||||||||| ||| ||||      ||| ||||||||||||  | ||| || ||  |||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtc------cgacacgacaccgacacatataattacaccaaat 1433485  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
     |||||||||| |||||||||||   |||||| ||||| | |||| |||||||||    
T  1433484 gatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 293
Target Start/End: Complemental strand, 4024105 - 4024026
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||| || |||||||||||||| |||| | || ||| || | | |||||||| ||||||| ||||||||||||||||||    
T  4024105 gtcgtatccgacatcgatacgacgccgatacttataattatattaaattatgtcatttttttaaattattagttgtgtcg 4024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 4793892 - 4793837
Alignment:
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||| |||||||||| ||||||| ||| ||||||||| | ||||||||||||||||    
T  4793892 atgtaattttttcaagttattagctgtatcgacgtgtcagtgtctgtgtcgtgtcc 4793837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 5236046 - 5235959
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||||||||| || | ||| || ||| |||||| | ||||| | ||||||||||  |||||||||||| | |||||||||||||||||    
T  5236046 acgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcca 5235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 22868079 - 22868016
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||| ||| ||||||||| |||||| ||||| | |||| |||| ||||||    
T  22868079 actgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtcc 22868016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 28155629 - 28155562
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgtt 300  Q
    ||||||||||| |||||| || || ||||||||| ||||| ||||||||||||  |||||| ||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgtt 28155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 33994270 - 33994187
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||| |||||| |  ||||||||||||||  ||||||||||| |||||| |||| ||||| | |||  ||||||||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtc 33994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 5307293 - 5307235
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||| ||||||||| ||| |||||| ||||| | ||||||| |||||||    
T  5307293 aattatgtgattttctcaaattataagtggtgtcggcgtgtcaatgtctgtatcgtgtc 5307235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 11722121 - 11722183
Alignment:
Q  256 ctgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||||||| ||||||| ||||  |||||| ||||| | |||| |||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtcc 11722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 13557753 - 13557829
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttc---aaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||| || ||||||||||||||||||||    |||||||||||| ||||| ||||| | |||||||||| |||||    
T  13557753 ttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtcc 13557829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 40287361 - 40287422
Alignment:
Q  237 accgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||| |||||| || ||||||| || |||||||||||||||||| ||||||||| |||||    
T  40287361 accgacacttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgt 40287422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 6028685 - 6028600
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||||||||||||| || | | |||||||| || ||||||||||||||    | |||| |||| | |||||||||||||||    
T  6028685 acgacaccgacatttgtaattacattaaattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtc 6028600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 30813916 - 30813867
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacac 211  Q
    ||||||| ||||||||||||| ||| ||| ||||||| ||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacac 30813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 598327 - 598263
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgaca 226  Q
    ||||||| |||||||||| || ||| ||| ||||| ||| ||||||||||  |||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgaca 598263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 317
Target Start/End: Complemental strand, 2034508 - 2034416
Alignment:
Q  225 catcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||| ||||  | ||  || ||| |||||| |||| || ||||||||||||| |||||||||||| | | || ||||||||||    
T  2034508 catcgatacgacactgacacatatatatacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc 2034416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 9933312 - 9933268
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||| |||||||||||||||||||||||||  ||| |||||||    
T  9933312 actgaaatatgtgattttttcaaattattagtaatgttgacgtgt 9933268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 10042970 - 10042894
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcatag 335  Q
    |||||||||| ||| ||||||||||||| |||||| ||||| | |||| ||||||| ||  ||||  ||||||||||    
T  10042970 aattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgtatcggtatctttgcttcatag 10042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 19213862 - 19213810
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||| |||||  || |||| ||||||||||||||| ||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattattag 19213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 21141004 - 21141048
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||| ||||||| | ||||||||||| ||||||||||||    
T  21141004 actgaattatatgattttcttaaattattagtggtgtcgacgtgt 21141048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 32308157 - 32308113
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||| ||||||||||||  |||||| |||||    
T  32308157 actgaattatgtgattttctcaaattattagcggtgtcggcgtgt 32308113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 42720916 - 42720956
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||||||||||||||||  ||||| ||||||    
T  42720916 aattatgtgattttttcaaattattagcggtgtcaacgtgt 42720956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 48246844 - 48246896
Alignment:
Q  264 tgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||||||| |||||||| ||   |||||||||||| ||||||||||||||||    
T  48246844 tgtgattttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcgtgt 48246896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 161 - 299
Target Start/End: Original strand, 24613629 - 24613767
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||||||||||||| ||| ||||||||| | | |||| |||||  ||||||||||||| ||| | |||||||||| |||||  || | ||||    
T  24613629 cctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaa 24613728  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  24613729 ttatgtgattttctcaaattattagttgtgtcgacgtgt 24613767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 162 - 318
Target Start/End: Original strand, 23292926 - 23293071
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||  ||||||||           ||||||||||| |||||| || |||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc-----------cgacaccgacacttgtaattatactgaat 23293014  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||    
T  23293015 tatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 23293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 161 - 317
Target Start/End: Complemental strand, 19482799 - 19482643
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||| |||||||| ||| |||  |||| ||  ||||||||||  ||||||||  | | ||| |||||||| ||| |||||| || || |||    
T  19482799 cctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaa 19482700  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    ||||||||| ||||||||||||||||||||||| ||||| | |||||||||||||||    
T  19482699 ttatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 30982808 - 30982930
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||| ||||| ||| ||||| ||| ||||||||||  ||||||||||||| ||| |||||||||||| || ||| || |||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  263 atgtgattttttcaaattattag 285  Q
    |||||||||| |||||| |||||    
T  30982908 atgtgattttctcaaatcattag 30982930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 4383445 - 4383361
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||| ||||| ||| ||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||    
T  4383445 gtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgt 4383361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 334
Target Start/End: Original strand, 12797338 - 12797438
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttca 332  Q
    ||||||||||| |||||| || |||||||||||||| |||||||||||||||||| || || ||||| | |||| ||||||| ||| ||||| |||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccgtatccgtgcttca 12797436  T
Q  333 ta 334  Q
    ||    
T  12797437 ta 12797438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 21945562 - 21945477
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || |||||||||||| |||||||||||||||||| ||||||| | ||| | |||||||||| |||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtcc 21945477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 163 - 318
Target Start/End: Complemental strand, 848080 - 847925
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||||||||||||||||||||| |||  |||| ||| |||  |||||   ||||||| |||| | | | |||||||||| |||||| || | ||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatt 847981  T
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||| ||||| ||||||||||||  |  ||| ||||| | ||||||||||||||||    
T  847980 atgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtcc 847925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 335
Target Start/End: Complemental strand, 49431085 - 49430982
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatttttt-caaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttc 331  Q
    ||||||||||| || ||| || |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||| | ||||||||| | ||| ||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccgtgtccgtgcttc 49430986  T
Q  332 atag 335  Q
    ||||    
T  49430985 atag 49430982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 54580023 - 54580082
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 318
Target Start/End: Original strand, 3947702 - 3947851
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| ||||||||||||| ||| |||  |||| | | ||||||||||  |||||||| ||||      |||||| |||| |||||| || ||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgaca------cgacactgacacttgtaattacactgaatt 3947795  T
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||| ||||||||||||||||||| ||||||| | |||   ||||||||| ||||||    
T  3947796 atgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtcc 3947851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 27706158 - 27706261
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcg 313  Q
    |||||||| |||||  | |||||||  ||| |||||| || ||| |||||||||||||||| ||||||||| |||||||||||||| | ||||  |||||    
T  27706158 gtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcg 27706257  T
Q  314 tgtc 317  Q
    ||||    
T  27706258 tgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 11651156 - 11651218
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| | |||| || |||||||    
T  11651156 actgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 314
Target Start/End: Original strand, 12895214 - 12895355
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||| |||||||| ||| ||| ||||| ||||||||||| ||| ||||||||           ||||||||||| || ||| || ||  |||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtc-----------cgacaccgacacttataattacacaaaat 12895302  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||  |||||||    
T  12895303 tatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgt 12895355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 29205501 - 29205451
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 316
Target Start/End: Complemental strand, 47264044 - 47263962
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||| |||||||||||| || || |||||||||||||||| ||||||||||| | ||||||||||| | | | ||||||||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattagctatgtcgacgtgtcaatatttgtgtcgtgt 47263962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 11596351 - 11596404
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||| ||| |||||| || |||||||||||||||||||||||||||||||    
T  11596351 acgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 30299007 - 30298926
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||||||| |||||| || |||||||||||| | ||||||||||||||||| ||||||| ||||| | |||| |||||    
T  30299007 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 30327875 - 30327794
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||||||| |||||| || |||||||||||| | ||||||||||||||||| ||||||| ||||| | |||| |||||    
T  30327875 acgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 40481683 - 40481611
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||| || ||||||||||||||||||| ||||||||||||||| ||| ||||| | |||| |||||||||||    
T  40481683 ttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtcc 40481611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 8423718 - 8423770
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||||||||| ||| || |||||||||||||||||| ||||||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 14126133 - 14126197
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||||||||||||| ||| |||||||||||   |||||| ||||||| |||||||||||||||||    
T  14126133 actgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtcca 14126197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 28964248 - 28964300
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||| |||| |||||| || |||||||||||||||||||||||||||||||    
T  28964248 cgacacagacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 35157986 - 35158070
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||| || ||| || ||| ||||||||||||||| |||||||||||||| |||| ||||| | |||| |||| ||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtcc 35158070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 12895115 - 12895182
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| |||||| ||   ||||||||||||||||||||||||||||| ||| ||| |||||    
T  12895115 acgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 28084582 - 28084495
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgatttttt-caaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||| |||| |||||| || | |||||||||||||||||| |||||| |||| ||||||| ||||| |  |||||||||||||||    
T  28084582 acgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtcc 28084495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 904052 - 903930
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| || ||||| | |||||| |||| |||| ||  ||||||||||| ||||||||  ||| |||||||| || || |  | ||| || |||||||    
T  904052 ctatgaagcaaggacatttcttggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaat 903953  T
Q  262 tatgtgattttttcaaattatta 284  Q
    ||||||||||| |||||||||||    
T  903952 tatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 274
Target Start/End: Complemental strand, 19312463 - 19312353
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    |||||||||||||||| ||  || |||||||||  || ||||||||||  ||||| || |||| ||| |||||||||| | || ||| || ||||||| |    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  264 tgtgatttttt 274  Q
    |||||||||||    
T  19312363 tgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 752934 - 753019
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||| ||| |||||| || |||||||||||||| |||||| |||||||||| |||||||  ||||||  || ||||||||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc 753019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 5832709 - 5832778
Alignment:
Q  248 taactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||| ||| ||| || ||||||| ||||||||||||  |||||||||||||| ||| |||||||||||    
T  5832709 taactatactaaatcatatgattttctcaaattattagcagtgtcgacgtgttaatgtttgtgtcgtgtc 5832778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattatta 284  Q
    ||||||||| |||||| || ||| ||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 715608 - 715692
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||| ||| |||||| || |||||||||||||| |||||| |||||||||| |||||||  ||||||  || |||||||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtc 715692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 2361975 - 2362035
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||||||||||| || ||| || ||| |||||||| |||||||||||||||||| |||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcg 2362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 12708221 - 12708121
Alignment:
Q  218 tgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaa-ttattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    |||| ||||| || |||||| ||||| |||||| || |||||||||| | ||||||| ||| ||||||||||||||  ||||| | |||||| |||||||    
T  12708221 tgtccgacatagacacgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgt 12708122  T
Q  317 c 317  Q
    |    
T  12708121 c 12708121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 38847012 - 38847072
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||| |||| |||||| || ||||||| || |||||||||||||||||||| |||||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcg 38847072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 4157208 - 4157150
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| |||||| |  ||| ||||||||||||||| ||||||||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgattttt-caaattattagttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 161 - 299
Target Start/End: Original strand, 22234818 - 22234957
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||| ||||| || ||| |||  |||| | | ||||||||||  |||||||| |||| ||| ||||||||||||  |  || || ||||||    
T  22234818 cctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaa 22234917  T
Q  261 ttatgtga-ttttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||| |||||||||||| ||||  |||||| |||||    
T  22234918 ttatgtgatttttttcaaatttttagcggtgtcggcgtgt 22234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 291
Target Start/End: Original strand, 32273549 - 32273584
Alignment:
Q  256 ctgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32273549 ctgaattatgttattttttcaaattattagttgtgt 32273584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 36635361 - 36635298
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||| ||||||||||||| |||| | ||||| | |||| | |||||||||    
T  36635361 actgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtcc 36635298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 42640588 - 42640519
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatt---ttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||||| || ||||||||||||||||   |||||||||||| || ||||||| |||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgt 42640519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 291
Target Start/End: Original strand, 14465099 - 14465133
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||||||||||||||||||||||||| |||||    
T  14465099 tgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 291
Target Start/End: Complemental strand, 16073453 - 16073396
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||||||| |||||| || ||||||||||| || ||||||||||||||| ||||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgt 16073396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 34306804 - 34306893
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatc 323  Q
    ||||||||||| |||||| || |||  ||||| ||||||| |||||||||||||||||||| ||| | | ||||||| | |||||| ||||    
T  34306804 cgacaccgacacttgtaattacactacattatctgatttt-tcaaattattagttgtgtcggcgtatcagtgtctgtattgtgtccgtatc 34306893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 292
Target Start/End: Complemental strand, 51701336 - 51701258
Alignment:
Q  214 gtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||||||  |||| ||| |||||||  ||| |||||| || ||| |||||||| |||||||||||||||||| ||||||    
T  51701336 gtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 40179658 - 40179715
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||| | |||| |||||    
T  40179658 actgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 336
Target Start/End: Complemental strand, 24544038 - 24543941
Alignment:
Q  236 caccgacatttgtaactaaactgaattatgtg-attttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcata 334  Q
    |||||||| |||||| || | || |||| ||| ||||||| |||||||||||||||||| ||||| | ||||||    |||||| ||||| |||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtctg----gtgtccgtatccatgcttcata 24543943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 50280914 - 50280874
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||| |||||||||||||||| ||||||| |||||    
T  50280914 aattatgtgaatttttcaaattattagctgtgtcggcgtgt 50280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 318
Target Start/End: Original strand, 15796223 - 15796379
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||| |||||| ||||| ||| ||||||||| ||| ||||||  || ||||| |||| | | |||||||||||| |||||| || |||||||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaat 15796322  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||| |||||||||||||||||||  ||||||| ||||| |||||| |||||||||||    
T  15796323 tatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtcc 15796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 161 - 299
Target Start/End: Complemental strand, 14209244 - 14209106
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||||||||| |||||| |||  || | ||||||||| ||||  |||||||| |||| ||| ||||||| |||| |||||| || ||||||    
T  14209244 cctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaa 14209145  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  14209144 ttatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 299
Target Start/End: Original strand, 34185052 - 34185189
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| ||| ||| ||||| ||| ||||||||||| ||| |||| ||||| || |||||||||||| |||||| || |||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    | ||||||||||| ||||||||||  |||||| |||||    
T  34185152 tgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 318
Target Start/End: Original strand, 41961578 - 41961735
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| |||||||||| || ||| ||| ||||| ||  ||||||||||  |||||||| || | ||| |||||||||||| |||||| || || |||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 41961677  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    | ||||||| |||||||||||||||||||| || ||||| | ||||||||||||||||    
T  41961678 taatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtcc 41961735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 161 - 299
Target Start/End: Complemental strand, 28812646 - 28812508
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||  ||| ||||||||| ||| ||| ||||| | | |||||||||    |||||||||||| | | |||||||||||| ||||||||| ||||||    
T  28812646 cctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaa 28812547  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  28812546 ttatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 171 - 299
Target Start/End: Original strand, 4987229 - 4987357
Alignment:
Q  171 acggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgatt 270  Q
    |||||||||||| ||| ||| ||||| ||| ||||||||||  ||||||||  ||| ||| ||| |||| ||| |||||| || ||||||||||||||||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgatt 4987328  T
Q  271 ttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||||||| ||||||| |||||    
T  4987329 ttttcaaattattagctgtgtcggcgtgt 4987357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 34910391 - 34910310
Alignment:
Q  218 tgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||| |||| |||||||||||||||  |||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  34910391 tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 14979218 - 14979136
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcataggt 337  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||  ||||||  |||||||||| ||||| ||||||||||||    
T  14979218 actgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccgtatccgtgcttcataggt 14979136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 15999958 - 16000099
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||||||||| ||| ||||| ||| ||||||||||  |||||||   || |   | ||||||||||| |||||  || |||||||||||| ||    
T  15999958 cacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt---acgtg--tccgacaccgacacttgtagttacactgaattatgttat 16000052  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgt 316  Q
    ||||| |||||||||||||||||| ||||| | ||||||||||||||    
T  16000053 ttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 318
Target Start/End: Complemental strand, 11666066 - 11665918
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||||||| | ||| ||||||||||| || |||||  ||||||||| ||||| | ||||||||||||  | ||| || ||| |||| ||||||    
T  11666066 cacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgat 11665967  T
Q  270 tttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||| ||||||||||||   |||||  |||||| ||| ||||||||||||    
T  11665966 tttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtcc 11665918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 3164047 - 3164110
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||    
T  3164047 actgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtcc 3164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 335
Target Start/End: Complemental strand, 26508166 - 26508067
Alignment:
Q  236 caccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcatag 335  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||  ||||| | | ||||| |||||||| ||||| | ||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccgtatccgttcttcatag 26508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 10955011 - 10954945
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||| |||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 10954945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 317
Target Start/End: Complemental strand, 14217021 - 14216867
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| |||||||||| || ||| |||  |||| ||  ||||| ||||  |||||||| ||||   | ||||||| |||| |||||| || ||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    || |||| |||| |||||||||||||||||||||||| | |||| ||||||||||    
T  14216921 atatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 317
Target Start/End: Complemental strand, 14223150 - 14222996
Alignment:
Q  163 tatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatt 262  Q
    |||||| |||||||||| || ||| |||  |||| ||  ||||| ||||  |||||||| ||||   | ||||||| |||| |||||| || ||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  263 atgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    || |||| |||| |||||||||||||||||||||||| | |||| ||||||||||    
T  14223050 atatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 28918061 - 28917975
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||| | ||||| ||||| | | || |||||||||||    
T  28918061 acgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtcc 28917975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 55401134 - 55401053
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||| ||| | | |||| |||||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgt 55401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 1509614 - 1509539
Alignment:
Q  217 gtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||| |||| ||| |||||||||||| |||||| || ||| ||||||||||||||||||||||||||| ||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 155 - 293
Target Start/End: Complemental strand, 27505377 - 27505245
Alignment:
Q  155 ttctttcctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaa 254  Q
    |||||| ||||||| ||||||||||||| ||| ||| | ||| ||| ||||||||||  |||||||| ||||      ||||||||||| |||||| ||     
T  27505377 ttctttgctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagaca------cgacaccgacacttgtaattac 27505284  T
Q  255 actgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    ||| |||||||||||||||  |||||||||| |||||||    
T  27505283 acttaattatgtgatttttaaaaattattagctgtgtcg 27505245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 26492205 - 26492307
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttca 332  Q
    ||||||||| | |||||| || |||||||| | |||||||||||||||||||| | ||||| ||||| | |||| ||||||||||| ||| | |||||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccgtattcgtgcttca 26492304  T
Q  333 tag 335  Q
    |||    
T  26492305 tag 26492307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 8587021 - 8587106
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || ||| ||||||||||||||||||||||| ||| ||||||| ||||| | |||| ||||| |||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtcc 8587106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 10335286 - 10335371
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||  || ||| || ||||||| |||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 10335371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 20503522 - 20503458
Alignment:
Q  235 acaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||| |||||| || |||||||||||| |||||||||||||||| ||||||||| |||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgt 20503458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 21256985 - 21257045
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    |||| ||||||| |||||| || ||||||||||||||||||||||||||||||| ||||||    
T  21256985 acgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 14829766 - 14829664
Alignment:
Q  215 tcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    |||||||  ||| ||| |||||||||||| |||||| ||   ||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||| |    
T  14829766 tcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattatgtgattttt-caaattattagctgtgtcggcgtgtcagtgtctgtgtcat 14829668  T
Q  315 gtcc 318  Q
    ||||    
T  14829667 gtcc 14829664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 299
Target Start/End: Complemental strand, 14832199 - 14832092
Alignment:
Q  192 cgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||| ||| ||||||||||  |||||||| || | ||| ||||||| |||| |||||| || | ||| ||||||||||||||||||||||||| ||| |    
T  14832199 cgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtat 14832100  T
Q  292 cgacgtgt 299  Q
    || |||||    
T  14832099 cggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 51206353 - 51206412
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtc 292  Q
    ||||||||||| |||||  || ||||||||||||||||||||||||||||||| ||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 750590 - 750684
Alignment:
Q  205 cggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||  |||||||| || | ||| |||||||||||| |||||| |  |  |||||||||||| ||||||||||||||||||||||| |||||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgt 750684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 8383316 - 8383230
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    ||||||||||| || ||| || |||||||||| ||||||| ||||||||||||  |||||| ||||| | |||| ||||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcca 8383230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 21479177 - 21479111
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| | |||| || |||||||| |||||||||||||||||||||| ||||||| |||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgt 21479111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 49651785 - 49651838
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||||||| |||||| || | |||||||||||||||||||||||||||||    
T  49651785 acgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 25064942 - 25064883
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||||||||||||| |||||  |||||| ||||| | ||||||||||||||||    
T  25064942 aattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 318
Target Start/End: Original strand, 35994744 - 35994822
Alignment:
Q  239 cgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||| |||||| || |||||||||||||||||| |||||||||||| ||||||| | ||| ||||||  ||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtcc 35994822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 335
Target Start/End: Complemental strand, 40052367 - 40052295
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtccatatccctgcttcatag 335  Q
    ||||||||||||||||||||||||||||| ||||||| ||      |||| ||||||||||| ||||| ||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcg------tgtcagtgtcgtgtccgtatccgtgcttcatag 40052295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 11493383 - 11493441
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcg 313  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||| | |||| ||||||    
T  11493383 actgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 18427008 - 18426942
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| | ||| || || ||||||||||||||||| ||||||||||| |||||| |||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgt 18426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 8412964 - 8413005
Alignment:
Q  252 taaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  8412964 taaactgaattatgtgtttttctcaaattattagttgtgtcg 8413005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 10268487 - 10268552
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||| |||| |||||| || ||| ||||||||||||||||||||||||||  ||||||| |||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgt 10268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 11610573 - 11610528
Alignment:
Q  240 gacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattag 11610528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 25948886 - 25948939
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||| ||| || ||| || |||||||||||||||||||||||||||||||    
T  25948886 acgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 7928509 - 7928457
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||||||  | ||| || |||||||||||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 8593196 - 8593136
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatttttt-caaattattagttgtgtc 292  Q
    ||||||||||| |||||| || |||||||||||||||||||| ||||||| ||| ||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 23870581 - 23870625
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||    
T  23870581 actgaattatatgattttttcaaattattagcggtgtcgacgtgt 23870625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 25775568 - 25775516
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgatt-ttttcaaattatta 284  Q
    ||||||||||| |||||| || |||||||||||||||| ||||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 38731277 - 38731225
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    |||||||||||  | |||||| |||||||||||||||||||| ||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattag 38731225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 3610710 - 3610607
Alignment:
Q  216 cgtgtctgacatcgatacg-acaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    |||||| |||| ||||||| ||| ||||| | |||| || ||||| |||||| ||||||| |||||||||  ||||| | ||||| | ||||||||||||    
T  3610710 cgtgtccgacaccgatacggacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgt 3610611  T
Q  315 gtcc 318  Q
    ||||    
T  3610610 gtcc 3610607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 39756296 - 39756229
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||||| |||||| || | | |||||||||||||||| ||||||||| || ||||| |||||    
T  39756296 acgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgt 39756229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 22774071 - 22774149
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||||| || ||| || |||||| ||||||| ||| || |||||||||| ||||||||||||   ||||||||||    
T  22774071 gacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtctgtgtc 22774149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 41319334 - 41319376
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||||||| ||||||||||||||||| | ||||||||||||    
T  41319334 tgaattatgtcattttttcaaattattattggtgtcgacgtgt 41319376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 5441055 - 5441116
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||| ||||||| ||||  ||| || ||||| | ||||||||||||||||    
T  5441055 tgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtcc 5441116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 17005604 - 17005677
Alignment:
Q  218 tgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgt 291  Q
    ||||||||| | | || ||||||||| || ||| || |||||||||| ||||||| ||||||||||||| ||||    
T  17005604 tgtctgacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 25093561 - 25093476
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||  | ||| || |||||||| ||||||||| |||||| ||||   |||||| ||||||| |||| |||||||||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtcc 25093476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 7614415 - 7614475
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||||||| | ||| || |||||||||||||||||| | |||||||||  |||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg 7614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 11252095 - 11252031
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgaca 226  Q
    ||||||| ||| ||||||||| ||| ||| |||||||||||| |||||||  || ||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgaca 11252031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 12704044 - 12704000
Alignment:
Q  255 actgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||||| |||| ||||||||||||| |||||| |||||    
T  12704044 actgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 14747622 - 14747554
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgatttttt-caaattattagttgtgtcgacgtgt 299  Q
    ||||||| |||  |||||| || ||| |||||||||||||||| ||||||||||| ||||||| |||||    
T  14747622 acgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgt 14747554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 46741 - 46656
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||||| ||||| |||||| |||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtcc 46656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 318
Target Start/End: Complemental strand, 241724 - 241568
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| |||||||||| || ||| ||| ||||| ||| ||||||||||  |||||||| |||| | | |||||||||||| |  ||| || ||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  262 tatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||| ||||||||||| ||||||| ||||| | |||| |||||||||||    
T  241624 tatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 241568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 8564 - 8695
Alignment:
Q  162 ctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaat 261  Q
    ||||||| ||||||||||||| | | ||| ||||| ||  ||||||||||   ||||||| || | ||| ||||||||||||||||||| || || ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaat 8663  T
Q  262 tatgtgattttttcaaattattagttgtgtcg 293  Q
    |||||||| |||||||||||||||||||||||    
T  8664 tatgtgatattttcaaattattagttgtgtcg 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 20232 - 20146
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||| |||| |||||| || ||||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||    
T  20232 acgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtcc 20146  T

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Target: scaffold0136 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 317
Target Start/End: Original strand, 3777 - 3933
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| || |||||||||| ||| ||| |||||  ||||||||||||   |||||||| |||| | | ||||||| |||| |||||| || ||||||    
T  3777 cctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaa 3876  T
Q  261 ttatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtc 317  Q
    |||||||||||||| |||||||||   |||||| | | | | |||||||||||||||    
T  3877 ttatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtc 3933  T

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Target: scaffold0011 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 17750 - 17822
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtc 306  Q
    |||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtc 17822  T

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Target: scaffold0036 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 286
Target Start/End: Original strand, 9678 - 9800
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    ||||| ||||||||||||| ||| || |||||| |||||||| ||||   ||||||||||||| | | ||||||||||||  | ||| || |||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  264 tgtgattttttcaaattattagt 286  Q
     |||||||| |||||||||||||    
T  9778 agtgattttctcaaattattagt 9800  T

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Target: scaffold0044 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 283
Target Start/End: Complemental strand, 53302 - 53189
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    |||||||||| |||||| || |||||| ||| ||||||||||  ||| |||| |||| ||| ||| |||||||| || ||| || |||||||||||||||    
T  53302 cacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgat 53203  T
Q  270 tttttcaaattatt 283  Q
    ||| ||||||||||    
T  53202 tttctcaaattatt 53189  T

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Target: scaffold0019 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 299
Target Start/End: Complemental strand, 71856 - 71716
Alignment:
Q  161 cctatgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaa 260  Q
    |||||||| ||| ||||||||| ||| ||| ||||| ||| ||||||||||  || ||||| |||| ||| ||||||| |||| | |||| || ||||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaa 71757  T
Q  261 ttatgtgatt--ttttcaaattattagttgtgtcgacgtgt 299  Q
    || |||||||  ||||||||||||||| ||||||| |||||    
T  71756 ttgtgtgattttttttcaaattattagctgtgtcggcgtgt 71716  T

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Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 178819 - 178904
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatg-tgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||| |||| |||||| || ||||||||||| |||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtcc 178904  T

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Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 14577 - 14523
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  14577 ttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

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Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 130538 - 130456
Alignment:
Q  236 caccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||| |||||| || |||||||||||||||||||||||| |||||  ||||||| | ||| |||||| |||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtcc 130456  T

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Target: scaffold0103 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 51858 - 51769
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgt-cgtgtccatatccctgcttcat 333  Q
    |||||| || ||||||||||||||||||||||||||||||| ||||||| ||||| | |||| |||| ||| ||||||||  ||||||||    
T  51858 ttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatccatatctgtgcttcat 51769  T

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Target: scaffold0053 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 8857 - 8772
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||||| |||||| || ||| ||| || |||||||||||||||||||| ||||||| ||||| | |||| |||||||||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 8772  T

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Target: scaffold0086 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 3050 - 2946
Alignment:
Q  170 cacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgat 269  Q
    ||||||||||||| ||| ||| ||||||||| ||||| ||||  ||||||||||| | ||| ||||||| || | |||||| || ||| |||||||||||    
T  3050 cacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgat 2951  T
Q  270 ttttt 274  Q
    |||||    
T  2950 ttttt 2946  T

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Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 13459 - 13380
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    ||||||||||  |||||| |  |||||||||||||||||| |||||||||||||||||||| ||||| | |||| |||||    
T  13459 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

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Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 21868 - 21947
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    ||||||||||  |||||| |  |||||||||||||||||| |||||||||||||||||||| ||||| | |||| |||||    
T  21868 cgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

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Target: scaffold0085 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 26428 - 26373
Alignment:
Q  257 tgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtc 312  Q
    |||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 319
Target Start/End: Original strand, 263303 - 263458
Alignment:
Q  164 atgaaacacggacactccttggagtagacgtgttccgatgtcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaatta 263  Q
    ||||| ||||||||||||| ||| ||| |||||   | | ||| ||||  ||||||||||||| ||| ||||||| |||| || ||| || |||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  264 tgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||| |||| ||||||||||||  |||| ||| ||| | |||| ||||||| ||||    
T  263403 tgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatcca 263458  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 23480 - 23394
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||||||||| || ||| || ||||||||||||||||||||  | ||||||  ||||||| ||||| | ||||||||||||||||    
T  23480 acgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtcc 23394  T

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Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 23599 - 23484
Alignment:
Q  204 tcggacacaagtcgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgatt-ttttcaaattattagttgtgtcgacgtgttat 302  Q
    |||||||||  ||||||| |||| ||| ||||||| |||| || ||| || |||||||||||||||| |||| || ||||||  |||||||  |||| |     
T  23599 tcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcag 23500  T
Q  303 tgtctgtgtcgtgtcc 318  Q
    ||| ||||||||||||    
T  23499 tgtatgtgtcgtgtcc 23484  T

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Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 19622 - 19550
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||| || ||||||||||||||||||| ||||||||||||||| ||| ||||| | |||| |||||||||||    
T  19622 ttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtcc 19550  T

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Target: scaffold0722 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 7032 - 7096
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgt 297  Q
    ||||||| ||| |||||| || ||| |||||||| |||||||||||||||||| |||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgt 7096  T

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Target: scaffold0652 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 462 - 514
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattag 285  Q
    ||||||||||| |||||| || |||||||| ||||||||||||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 336
Target Start/End: Complemental strand, 70337 - 70233
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtg-tcgtgtccatatccctgcttc 331  Q
    ||||||||||| || ||| || |||||||||||| |||||||||||||||||  ||||||||| |||   |||||||| | |||||| ||||| ||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgtttgtgtccgtatccgtgcttc 70238  T
Q  332 atagg 336  Q
     ||||    
T  70237 gtagg 70233  T

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Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 83236 - 83172
Alignment:
Q  216 cgtgtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaatt 280  Q
    |||||| || ||| ||||||||||||||||||||| || |||||||||||| ||||||| |||||    
T  83236 cgtgtccgatatcaatacgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 8739 - 8640
Alignment:
Q  219 gtctgacatcgatacgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    ||||||||| || |||||||||||| || ||| || |||||| |||||||||||   ||||||||||  |||||||||||| | ||||  ||||||||||    
T  8739 gtctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtcc 8640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 8068 - 8003
Alignment:
Q  233 cgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||| || ||| || |||| ||||| |||||||||||||||||||||||||||| |||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 33375 - 33429
Alignment:
Q  245 ttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    |||||| || |||||||||||| |||||||||||||||||| ||||||| |||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt 33429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 318
Target Start/End: Original strand, 4884 - 4969
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtga-ttttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcc 318  Q
    |||||| ||| |||||| || |||||||||||||| |||||| |||||||||| |||||||  ||||||  || ||||||||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc 4969  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 23830 - 23777
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgatt-ttttcaaattatta 284  Q
    |||||||||||| |||||| || |||||||||||||||| ||||||||||||||    
T  23830 acgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 7337 - 7377
Alignment:
Q  259 aattatgtgattttttcaaattattagttgtgtcgacgtgt 299  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  7337 aattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 135311 - 135393
Alignment:
Q  232 acgacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgt 314  Q
    ||||||||||||  | ||| || || ||||||||||||||| ||||||||||||  ||||||  |||||  ||||||||||||    
T  135311 acgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgt 135393  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 314
Target Start/End: Complemental strand, 63831 - 63750
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtg-tcgacgtgttattgtctgtgtcgt 314  Q
    |||||||||| |||||| |  |||||||||||| ||||| ||||||||||||  ||| | ||||||| |||||| |||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtgtcgt 63750  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 319
Target Start/End: Complemental strand, 90901 - 90816
Alignment:
Q  234 gacaccgacatttgtaactaaactgaattatgtgattttttcaaattattagttgtgtcgacgtgttattgtctgtgtcgtgtcca 319  Q
    |||| |||||| | ||| || |||||||||| ||||||| ||||||||||| | |||| |  |||| | |||||||||||||||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtcca 90816  T

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