View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6860_low_50 (Length: 290)
Name: NF6860_low_50
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6860_low_50 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 287
Target Start/End: Original strand, 2055168 - 2055435
Alignment:
| Q |
20 |
gattgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2055168 |
gattgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaa |
2055267 |
T |
|
| Q |
120 |
gaccatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcagg |
219 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2055268 |
gaccatattggtggcctccaagttctttatgacgataaatggattgatataacacctgtatctggagctctaatagttaatgttggtgatcttttgcagg |
2055367 |
T |
|
| Q |
220 |
caagttttatgcatacttatgtgtatatttccataaactattattagtaatgtacttcctatattctt |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2055368 |
caagttttatgcatacttatgtgtatatttccataaactattattagtaatgtacttcctatattctt |
2055435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 2050760 - 2050995
Alignment:
| Q |
21 |
attgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaag |
120 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2050760 |
attgctctttgccattattatcctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaag |
2050859 |
T |
|
| Q |
121 |
accatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggc |
220 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2050860 |
accatattggtggcctccaagttctttatgaagataaatggattgatataacacctgtatctggagctctcatagttaatgttggtgatcttttgcaggc |
2050959 |
T |
|
| Q |
221 |
aagttttatgcatacttatgtgtatatttccataaa |
256 |
Q |
| |
|
|||||||||| || ||||||||||||| ||| |||| |
|
|
| T |
2050960 |
aagttttatgtattcttatgtgtatatgtccttaaa |
2050995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 21 - 248
Target Start/End: Original strand, 2029469 - 2029696
Alignment:
| Q |
21 |
attgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaag |
120 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| |||| |
|
|
| T |
2029469 |
attgctctttgccattattatcctccttgtcctgaaccagaattgactgtgggaacaacaaagcattgtgacaatgatttcctcacagtgcttctccaag |
2029568 |
T |
|
| Q |
121 |
accatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggc |
220 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2029569 |
accatattggtggcctccaagttctttatgaagataaatggattgatataacacctgtacctggagctctcgtagttaatgttggtgatcttttgcaggc |
2029668 |
T |
|
| Q |
221 |
aagttttatgcatacttatgtgtatatt |
248 |
Q |
| |
|
|||||||||| || ||||||| |||||| |
|
|
| T |
2029669 |
aagttttatgtattcttatgtttatatt |
2029696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 2034027 - 2034265
Alignment:
| Q |
20 |
gattgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2034027 |
gattgctctttgccattactaccctccttgtcctgaaccagaattgactgtaggaacaacaaagcattctgataatgatttcctcacagtgcttctacaa |
2034126 |
T |
|
| Q |
120 |
gaccatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcagg |
219 |
Q |
| |
|
|||||| ||||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||| |
|
|
| T |
2034127 |
gaccatgttggtggtcttcaagttctgtatgacgacaaatggattgatataacacctgtacctggagctctcattgttgatgtcggtgatcttctgcagg |
2034226 |
T |
|
| Q |
220 |
caagttttatgcatacttatgtgtatatttccataaact |
258 |
Q |
| |
|
||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
2034227 |
caagttttatgtattcttatgtttatatttccataaact |
2034265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 33 - 258
Target Start/End: Original strand, 10768505 - 10768730
Alignment:
| Q |
33 |
cattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatattggtg |
132 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
10768505 |
cattattatcctccttgtcctgaaccagaattgactgtgggaacaaccaagcattctgataatgatttcctcactgtgcttctccaagaccatattggtg |
10768604 |
T |
|
| Q |
133 |
gcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggcaagttttatgca |
232 |
Q |
| |
|
||||||||||||| ||| | ||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
10768605 |
gcctccaagttctttatcaggataaatggattgatattacacctgttcctggggctctcatagttaatgttggagatcttttgcaggcaagttttctgca |
10768704 |
T |
|
| Q |
233 |
tacttatgtgtatatttccataaact |
258 |
Q |
| |
|
| |||||||| ||||||||||||||| |
|
|
| T |
10768705 |
ttcttatgtgcatatttccataaact |
10768730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 2057993 - 2058221
Alignment:
| Q |
21 |
attgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaag |
120 |
Q |
| |
|
||||||||||| ||||| || ||| ||| ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
2057993 |
attgctctttgtcattattatccttcttatcccgaaccagaattgactgtgggaacaaccaagcattctgataatgatttcctgacaatgcttctacaag |
2058092 |
T |
|
| Q |
121 |
accatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggc |
220 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| |
|
|
| T |
2058093 |
accatattggtggtctccaagttctttatgaagataaatggattgatataacacctgtacctggagctctcctagttaatgttggtgatcttcttcaggc |
2058192 |
T |
|
| Q |
221 |
aagttttatgcatacttatgtgtatattt |
249 |
Q |
| |
|
||||||||||||| ||||||||||||||| |
|
|
| T |
2058193 |
aagttttatgcattcttatgtgtatattt |
2058221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 1948687 - 1948466
Alignment:
| Q |
20 |
gattgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaa |
119 |
Q |
| |
|
||||||| |||||||||| || ||| ||||||||||||||||| ||||| | |||||||| |||||||| || || ||| |||||||||||||| ||| |
|
|
| T |
1948687 |
gattgctgtttgccattattatccttcttgtcctgaaccagaactgactatgggaacaactaagcattcagaccatagttttctcacagtgcttctacaa |
1948588 |
T |
|
| Q |
120 |
gaccatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcagg |
219 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1948587 |
gaccatattggtggtctccaagttctttatgaagataaatggattgatataacacctgcaactggagctctcatagttaatattggtgatcttttgcagg |
1948488 |
T |
|
| Q |
220 |
caagttttatgcatacttatgt |
241 |
Q |
| |
|
||||||||||| || ||||||| |
|
|
| T |
1948487 |
caagttttatgtattcttatgt |
1948466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 2037593 - 2037798
Alignment:
| Q |
22 |
ttgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaaga |
121 |
Q |
| |
|
|||||||||||||||| || ||| ||||||| ||||||||||||||||| |||||| | |||||||| || ||| ||| |||||||||||| | ||||| |
|
|
| T |
2037593 |
ttgctctttgccattattatccttcttgtccggaaccagaattgactgtgggaacagccaagcattcagaccatggttttctcacagtgcttatccaaga |
2037692 |
T |
|
| Q |
122 |
ccatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggca |
221 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
2037693 |
ccatattggtggtctccaagttctttatgaagataaatggattgatataacacctgtatctggagctctcatagttaatattggtgatcttctgcaggca |
2037792 |
T |
|
| Q |
222 |
agtttt |
227 |
Q |
| |
|
|||||| |
|
|
| T |
2037793 |
agtttt |
2037798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 2046846 - 2047037
Alignment:
| Q |
22 |
ttgctctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaaga |
121 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||| ||||| |
|
|
| T |
2046846 |
ttgctctttgccattattatcctccttgtcctgaaccagaattgactgtgggaacaaccaagtattctga--------------cagtgcttctacaaga |
2046931 |
T |
|
| Q |
122 |
ccatattggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggca |
221 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| | |
|
|
| T |
2046932 |
ccatataggtggtctccaagttctttatgaagataaatggattgatatagcacctgtacctggatctctcatagttaatgttggtgatcttctgcaggta |
2047031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 2022900 - 2023062
Alignment:
| Q |
28 |
tttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatat |
127 |
Q |
| |
|
||||||||||||| ||| | ||||| ||||||||||||||| | |||| ||| |||||| | ||||| || || |||| |||||||| ||||| ||||| |
|
|
| T |
2022900 |
tttgccattactatccttcctgtccagaaccagaattgactttgggaataaccaagcatacggataacgactttatcaccgtgcttctacaagatcatat |
2022999 |
T |
|
| Q |
128 |
tggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctct |
190 |
Q |
| |
|
||| |||||||||||||| |||| ||| ||| ||||| || ||||||| ||||| ||||| |
|
|
| T |
2023000 |
tggcggcctccaagttcttcgtgaaaatagttgggttgatgtatcacctgttcctggtgctct |
2023062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 48906974 - 48906776
Alignment:
| Q |
29 |
ttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatatt |
128 |
Q |
| |
|
||||||||| || ||||| || ||||||||||| |||||||| ||| || |||||||||||| | || |||||| | ||| |||| |||||||||||| |
|
|
| T |
48906974 |
ttgccattattatcctccatgccctgaaccagatttgactgtgggactaaaaaagcattctgacactggtttccttgcggtggttctccaagaccatatt |
48906875 |
T |
|
| Q |
129 |
ggtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggcaagtttt |
227 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| ||||| | | |||| ||| ||| ||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
48906874 |
ggtggcctccaagttctttatcaagataaatgggttgatgtgaaacctatacatgggtctctcgtagttaatgttggtgaccttttgcaggcaagtttt |
48906776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 17183383 - 17183272
Alignment:
| Q |
147 |
tatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggcaagttttatgcatacttatgtgtata |
246 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| || |||| |
|
|
| T |
17183383 |
tatgaaaataaatggattaatataacacctgtaactggagctctcatagttaatgttggcgatcttttgcaggcaagttttatgtactcttacgtttata |
17183284 |
T |
|
| Q |
247 |
tttccataaact |
258 |
Q |
| |
|
||||||||||| |
|
|
| T |
17183283 |
attccataaact |
17183272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 16426072 - 16425975
Alignment:
| Q |
48 |
tgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatattggtggcctccaagttct |
145 |
Q |
| |
|
||||||||||||||||| ||| | |||||| ||| || | |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
16426072 |
tgtcctgaaccagaattaactataggaacagtaaaacacgccgatattgatttcatcacagtgcttctacaagatcatataggtggcctccaagttct |
16425975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 16442350 - 16442253
Alignment:
| Q |
48 |
tgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatattggtggcctccaagttct |
145 |
Q |
| |
|
||||||||||||||||| ||| | |||||| ||| || |||| ||||||| ||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
16442350 |
tgtcctgaaccagaattaactttaggaacagtaaaacacgtcgatattgatttcatcacagtgcttctacaagatcatataggtggcctccaagttct |
16442253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 28742553 - 28742435
Alignment:
| Q |
27 |
ctttgccattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccata |
126 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||| | || || | ||||| | || |||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
28742553 |
ctttgccattactatcctgcttgtcctgaaccacatttaacgatgggaaccgccaaacattctgatagtagtttcctcacagtgcttcttcaagaccata |
28742454 |
T |
|
| Q |
127 |
ttggtggcctccaagttct |
145 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
28742453 |
ttggtggccttcaagttct |
28742435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 28735465 - 28735273
Alignment:
| Q |
33 |
cattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatattggtg |
132 |
Q |
| |
|
|||||||| ||| |||||||||||||||| || || | ||||| || || ||||||||| | ||| |||||||||||||| |||||||||||||||| |
|
|
| T |
28735465 |
cattactatcctgcttgtcctgaaccagatttaacaatgggaaccaccaaacattctgatggtagttttctcacagtgcttctccaagaccatattggtg |
28735366 |
T |
|
| Q |
133 |
gcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggcaagtt |
225 |
Q |
| |
|
| || |||||||| || |||| || ||||| ||| || |||| ||||| | ||||| | |||||| ||||||||||| |||||||||||| |
|
|
| T |
28735365 |
gtcttcaagttctttaccaagaaaagtggatcgatgtaccaccggtacccgaggctcttgttgttaatattggtgatcttctgcaggcaagtt |
28735273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 28783534 - 28783339
Alignment:
| Q |
33 |
cattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaa---gaccatattg |
129 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||| ||| | ||||| ||||| |||||||||| | ||| |||||| ||||||||||| || ||||||| |
|
|
| T |
28783534 |
cattactatcctgcttgtcctgaaccagaattaactatgggaaccacaaaacattctgatagttgttttctcacattgcttcttcaagatgatcatattg |
28783435 |
T |
|
| Q |
130 |
gtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggcaagtt |
225 |
Q |
| |
|
|||||||||||||| | | | | || |||||||||||| | || |||||| ||||| | |||||||||||||||||| | |||||||||| |
|
|
| T |
28783434 |
gtggcctccaagtttttcaccagaacaagtggattgatatacctccaatacctgatgctcttgttgttaatgttggtgatcttctacaggcaagtt |
28783339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 28700464 - 28700269
Alignment:
| Q |
33 |
cattactaccctccttgtcctgaaccagaattgactgtcggaacaacaaagcattctgataatgatttcctcacagtgcttcttcaagaccatatt---g |
129 |
Q |
| |
|
|||||||| ||| |||||||||||||||| || || | ||||| || || ||||||||| | ||| |||||||||||||| ||||||| |||| | |
|
|
| T |
28700464 |
cattactatcctgcttgtcctgaaccagatttaacaatgggaaccaccaaacattctgatgttagttttctcacagtgcttctccaagaccgtattattg |
28700365 |
T |
|
| Q |
130 |
gtggcctccaagttctgtatgaagataaatggattgatataacacctgtacctggagctctcatagttaatgttggtgatcttttgcaggcaagtt |
225 |
Q |
| |
|
||||||| |||||||| | |||| || ||||| ||| || |||| ||||| || ||||| | |||||| | ||||||||| |||||||||||| |
|
|
| T |
28700364 |
gtggccttcaagttcttcaccaagacaagtggatcgatgtaccaccggtacccggggctcttgttgttaatatcggtgatcttctgcaggcaagtt |
28700269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University