View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6860_low_57 (Length: 268)
Name: NF6860_low_57
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6860_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 21 - 255
Target Start/End: Complemental strand, 41698402 - 41698165
Alignment:
| Q |
21 |
aagattcatacgaaatgggtttcttaataggccaaagattctcccaaaggataaaaaacagagtggctgatgacaccatacttcaaaatcagcttagacc |
120 |
Q |
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| T |
41698402 |
aagattcatacgaaatgggtttcttaataggccaaagattctcccaaaggataaaaaacagagtggctgatgacaccatacttcaaaatcagcttagacc |
41698303 |
T |
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| Q |
121 |
ctttgctcaaactcaaact---cctcaatcagaatcacttctcaaagcactttttcataataatcaaaccaaattccctatgtattgggatgaactctcg |
217 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
41698302 |
ctttgctcaaactcaaactcctcctcaatcagaatcacttctcaaagcactttttcataataatcaaaccaaattccctatgtattgggatgaactcttg |
41698203 |
T |
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| Q |
218 |
gggactgcagctggaagtggtgtgcctcttcttgatgt |
255 |
Q |
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| T |
41698202 |
gggactgcagctggaagtggtgtgcctcttcttgatgt |
41698165 |
T |
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