View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6860_low_76 (Length: 228)

Name: NF6860_low_76
Description: NF6860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6860_low_76
NF6860_low_76
[»] chr1 (61 HSPs)
chr1 (1-216)||(26199717-26199928)
chr1 (5-216)||(44513768-44513975)
chr1 (1-215)||(27469475-27469685)
chr1 (3-216)||(52839669-52839878)
chr1 (1-210)||(33703282-33703487)
chr1 (1-216)||(8893430-8893640)
chr1 (5-215)||(12147815-12148021)
chr1 (3-210)||(11121115-11121318)
chr1 (1-216)||(12967499-12967709)
chr1 (1-216)||(21326610-21326821)
chr1 (1-215)||(22344679-22344889)
chr1 (1-216)||(33177364-33177574)
chr1 (1-215)||(37684854-37685067)
chr1 (1-215)||(37700450-37700663)
chr1 (1-216)||(44562515-44562726)
chr1 (1-216)||(6212680-6212891)
chr1 (1-215)||(46589284-46589495)
chr1 (1-216)||(38646721-38646932)
chr1 (5-174)||(5832375-5832540)
chr1 (1-216)||(2350759-2350970)
chr1 (1-216)||(23257225-23257436)
chr1 (1-216)||(36621489-36621699)
chr1 (1-216)||(15276212-15276427)
chr1 (1-174)||(4564653-4564822)
chr1 (1-84)||(28213185-28213267)
chr1 (1-216)||(630550-630761)
chr1 (1-70)||(10264846-10264915)
chr1 (1-216)||(38644563-38644774)
chr1 (1-216)||(45659151-45659362)
chr1 (1-216)||(14717039-14717247)
chr1 (1-215)||(29067186-29067394)
chr1 (1-84)||(23320577-23320659)
chr1 (87-216)||(47551314-47551443)
chr1 (87-210)||(26771325-26771448)
chr1 (1-208)||(32538962-32539167)
chr1 (87-210)||(49652054-49652177)
chr1 (99-216)||(28677897-28678014)
chr1 (87-216)||(34659407-34659536)
chr1 (1-65)||(48654954-48655018)
chr1 (1-84)||(22031986-22032068)
chr1 (1-216)||(34566825-34567029)
chr1 (1-216)||(15698336-15698546)
chr1 (97-210)||(32878937-32879050)
chr1 (1-216)||(47392275-47392484)
chr1 (2-215)||(10877484-10877694)
chr1 (96-216)||(40862592-40862712)
chr1 (15-86)||(35077796-35077866)
chr1 (140-210)||(171292-171362)
chr1 (36-216)||(13691529-13691705)
chr1 (99-209)||(18343849-18343959)
chr1 (143-216)||(1768202-1768275)
chr1 (1-50)||(40488325-40488374)
chr1 (106-170)||(45193441-45193505)
chr1 (99-170)||(15391065-15391136)
chr1 (99-170)||(42276592-42276663)
chr1 (99-170)||(51418221-51418292)
chr1 (1-35)||(49651981-49652015)
chr1 (1-70)||(900231-900299)
chr1 (87-208)||(8224393-8224514)
chr1 (3-48)||(40992447-40992492)
chr1 (96-216)||(10304806-10304926)
[»] chr4 (73 HSPs)
chr4 (1-215)||(14346568-14346778)
chr4 (1-215)||(15729748-15729958)
chr4 (1-216)||(29474094-29474305)
chr4 (1-215)||(46728687-46728897)
chr4 (1-215)||(38434736-38434945)
chr4 (1-216)||(16992009-16992220)
chr4 (2-215)||(29589128-29589337)
chr4 (1-215)||(51646231-51646444)
chr4 (4-216)||(43156916-43157125)
chr4 (1-216)||(26576269-26576479)
chr4 (1-216)||(23067614-23067825)
chr4 (23-210)||(1657338-1657521)
chr4 (1-216)||(46716660-46716871)
chr4 (1-216)||(6408580-6408793)
chr4 (1-199)||(1125078-1125272)
chr4 (1-215)||(4634420-4634630)
chr4 (1-215)||(9661990-9662200)
chr4 (1-215)||(14542279-14542489)
chr4 (1-215)||(30469890-30470100)
chr4 (5-216)||(4959340-4959546)
chr4 (5-216)||(46775624-46775830)
chr4 (1-216)||(6789643-6789853)
chr4 (2-216)||(28990436-28990646)
chr4 (2-216)||(37869183-37869393)
chr4 (1-204)||(29576899-29577099)
chr4 (1-216)||(54420506-54420718)
chr4 (1-84)||(40859811-40859893)
chr4 (4-216)||(52555506-52555714)
chr4 (1-216)||(32189117-32189327)
chr4 (1-216)||(41486712-41486922)
chr4 (40-216)||(34115422-34115594)
chr4 (1-217)||(33020692-33020902)
chr4 (1-210)||(42972175-42972380)
chr4 (1-210)||(50002948-50003153)
chr4 (2-84)||(3169564-3169645)
chr4 (1-121)||(30416454-30416570)
chr4 (1-215)||(53903718-53903926)
chr4 (99-215)||(26742231-26742347)
chr4 (1-67)||(7242680-7242746)
chr4 (2-71)||(1645462-1645531)
chr4 (99-216)||(7083579-7083696)
chr4 (1-208)||(9474313-9474516)
chr4 (97-216)||(5814575-5814694)
chr4 (11-215)||(38169926-38170126)
chr4 (1-216)||(31601122-31601335)
chr4 (113-216)||(6082197-6082300)
chr4 (27-216)||(20961611-20961796)
chr4 (149-215)||(40861219-40861285)
chr4 (99-216)||(626317-626434)
chr4 (5-70)||(12519797-12519862)
chr4 (143-216)||(12716890-12716963)
chr4 (155-216)||(23002698-23002759)
chr4 (5-156)||(46386600-46386747)
chr4 (143-215)||(9549714-9549786)
chr4 (99-215)||(38943916-38944032)
chr4 (16-165)||(2945289-2945434)
chr4 (45-170)||(29257406-29257527)
chr4 (5-83)||(9781704-9781780)
chr4 (1-71)||(35658438-35658507)
chr4 (134-215)||(4622470-4622551)
chr4 (99-216)||(22757331-22757448)
chr4 (99-216)||(26674609-26674726)
chr4 (1-65)||(4622622-4622686)
chr4 (99-206)||(6882193-6882300)
chr4 (99-170)||(30202275-30202346)
chr4 (132-216)||(31311732-31311818)
chr4 (158-216)||(3673778-3673836)
chr4 (142-216)||(27090997-27091071)
chr4 (153-215)||(55600305-55600367)
chr4 (149-210)||(3159258-3159319)
chr4 (143-216)||(23926316-23926389)
chr4 (99-216)||(51152361-51152478)
chr4 (3-51)||(35338533-35338581)
[»] chr7 (66 HSPs)
chr7 (1-216)||(28015494-28015705)
chr7 (1-216)||(38649124-38649334)
chr7 (1-216)||(5024822-5025033)
chr7 (3-210)||(39090227-39090430)
chr7 (1-215)||(41748294-41748504)
chr7 (1-216)||(26017424-26017635)
chr7 (1-210)||(772580-772785)
chr7 (1-215)||(43483737-43483935)
chr7 (16-210)||(34893263-34893449)
chr7 (1-216)||(8611390-8611601)
chr7 (1-216)||(40775404-40775615)
chr7 (1-215)||(49167062-49167272)
chr7 (1-216)||(47749871-47750082)
chr7 (1-210)||(11001980-11002185)
chr7 (1-139)||(9933984-9934114)
chr7 (1-216)||(30992589-30992800)
chr7 (1-216)||(36350305-36350515)
chr7 (1-216)||(37399735-37399946)
chr7 (1-216)||(40476844-40477055)
chr7 (3-216)||(23732159-23732368)
chr7 (1-210)||(46918537-46918741)
chr7 (15-216)||(19895450-19895647)
chr7 (1-216)||(7986029-7986240)
chr7 (1-216)||(10250254-10250460)
chr7 (1-72)||(13008579-13008650)
chr7 (1-84)||(24470530-24470612)
chr7 (1-84)||(24475478-24475560)
chr7 (3-216)||(43806916-43807125)
chr7 (4-216)||(42490843-42491051)
chr7 (1-82)||(22751575-22751655)
chr7 (5-174)||(134953-135118)
chr7 (87-189)||(16273601-16273703)
chr7 (1-217)||(29804444-29804652)
chr7 (5-191)||(14707724-14707905)
chr7 (5-71)||(22379600-22379666)
chr7 (99-216)||(3266623-3266740)
chr7 (14-71)||(37890396-37890453)
chr7 (5-216)||(44681601-44681808)
chr7 (29-215)||(33530242-33530424)
chr7 (104-215)||(37375814-37375925)
chr7 (149-216)||(38273185-38273252)
chr7 (1-173)||(8319452-8319620)
chr7 (1-50)||(23177511-23177560)
chr7 (143-216)||(24470679-24470752)
chr7 (143-216)||(24475627-24475700)
chr7 (132-216)||(32741022-32741106)
chr7 (104-215)||(9137192-9137303)
chr7 (4-70)||(21329206-21329270)
chr7 (133-216)||(22751667-22751750)
chr7 (99-170)||(45457369-45457440)
chr7 (87-202)||(45949459-45949574)
chr7 (1-70)||(24045188-24045257)
chr7 (99-204)||(44482652-44482757)
chr7 (115-216)||(45482317-45482418)
chr7 (5-61)||(15123897-15123953)
chr7 (150-210)||(22379481-22379541)
chr7 (54-215)||(21552222-21552379)
chr7 (1-110)||(25855092-25855197)
chr7 (29-71)||(16263544-16263586)
chr7 (5-83)||(27706485-27706562)
chr7 (155-216)||(25854977-25855038)
chr7 (99-216)||(36719319-36719436)
chr7 (16-65)||(40657770-40657819)
chr7 (143-216)||(47156660-47156733)
chr7 (184-216)||(10094771-10094803)
chr7 (106-170)||(22747322-22747386)
[»] chr5 (53 HSPs)
chr5 (1-216)||(41554624-41554835)
chr5 (1-215)||(18472493-18472703)
chr5 (1-208)||(33486343-33486546)
chr5 (1-216)||(20270851-20271062)
chr5 (11-216)||(34844063-34844264)
chr5 (1-215)||(8811919-8812128)
chr5 (1-210)||(40774897-40775103)
chr5 (1-207)||(22397327-22397525)
chr5 (16-215)||(14910443-14910638)
chr5 (1-215)||(29310121-29310331)
chr5 (1-215)||(31645966-31646176)
chr5 (1-216)||(6647679-6647890)
chr5 (1-215)||(4070688-4070897)
chr5 (1-215)||(6886945-6887155)
chr5 (1-172)||(4726738-4726905)
chr5 (1-215)||(28618739-28618949)
chr5 (1-168)||(37425161-37425319)
chr5 (1-216)||(28500826-28501037)
chr5 (1-215)||(35906406-35906616)
chr5 (1-216)||(40564923-40565132)
chr5 (2-216)||(15710680-15710892)
chr5 (1-216)||(5378439-5378650)
chr5 (93-216)||(37219228-37219351)
chr5 (2-84)||(2415538-2415619)
chr5 (2-210)||(8957344-8957548)
chr5 (1-216)||(32387602-32387812)
chr5 (1-215)||(29154357-29154567)
chr5 (1-71)||(19645948-19646018)
chr5 (1-216)||(28388874-28389086)
chr5 (1-71)||(9034849-9034919)
chr5 (96-156)||(35275819-35275879)
chr5 (1-51)||(13007829-13007878)
chr5 (1-51)||(13079282-13079331)
chr5 (2-68)||(32390557-32390623)
chr5 (97-210)||(25962148-25962261)
chr5 (99-216)||(32347481-32347598)
chr5 (7-51)||(13080298-13080341)
chr5 (99-215)||(23428489-23428605)
chr5 (160-216)||(28662362-28662418)
chr5 (87-163)||(39915712-39915788)
chr5 (5-69)||(41358180-41358244)
chr5 (1-68)||(34893854-34893921)
chr5 (106-170)||(6681689-6681753)
chr5 (3-121)||(34874000-34874114)
chr5 (143-210)||(10923906-10923973)
chr5 (5-210)||(12524436-12524637)
chr5 (104-170)||(28040871-28040937)
chr5 (96-210)||(41358257-41358371)
chr5 (1-71)||(41988289-41988359)
chr5 (149-210)||(11734609-11734670)
chr5 (99-208)||(27241301-27241410)
chr5 (143-216)||(2415675-2415750)
chr5 (106-210)||(29098033-29098137)
[»] chr8 (56 HSPs)
chr8 (1-215)||(16937106-16937316)
chr8 (1-215)||(3925457-3925667)
chr8 (2-216)||(10042910-10043119)
chr8 (1-215)||(12248478-12248691)
chr8 (1-215)||(31712843-31713053)
chr8 (1-207)||(32256496-32256698)
chr8 (1-215)||(23766876-23767086)
chr8 (3-216)||(2629051-2629260)
chr8 (1-216)||(8054574-8054784)
chr8 (1-215)||(44295453-44295663)
chr8 (1-216)||(41996682-41996891)
chr8 (1-130)||(37659103-37659228)
chr8 (4-216)||(12243982-12244190)
chr8 (1-216)||(16996655-16996866)
chr8 (3-216)||(32104603-32104813)
chr8 (1-174)||(5457208-5457377)
chr8 (1-216)||(9270158-9270369)
chr8 (1-208)||(37129449-37129652)
chr8 (1-216)||(5917515-5917719)
chr8 (1-216)||(15665676-15665889)
chr8 (17-207)||(37719993-37720179)
chr8 (12-215)||(13977556-13977757)
chr8 (4-71)||(26937665-26937732)
chr8 (2-174)||(14115636-14115804)
chr8 (87-210)||(7014239-7014362)
chr8 (1-209)||(9992804-9993007)
chr8 (1-81)||(32412927-32413006)
chr8 (5-210)||(5328095-5328291)
chr8 (99-216)||(10338597-10338714)
chr8 (3-84)||(13864498-13864578)
chr8 (99-215)||(10148182-10148298)
chr8 (1-84)||(31874221-31874303)
chr8 (9-71)||(3681068-3681130)
chr8 (97-207)||(32778747-32778857)
chr8 (1-66)||(5989767-5989832)
chr8 (149-210)||(5989894-5989955)
chr8 (1-216)||(32061931-32062142)
chr8 (106-215)||(38545930-38546039)
chr8 (133-217)||(3028281-3028365)
chr8 (16-210)||(18196918-18197108)
chr8 (15-71)||(26582796-26582851)
chr8 (1-84)||(14327616-14327698)
chr8 (14-174)||(14919198-14919354)
chr8 (142-209)||(16809137-16809204)
chr8 (96-210)||(16938044-16938163)
chr8 (149-216)||(17019381-17019448)
chr8 (149-216)||(17549818-17549885)
chr8 (149-210)||(283777-283838)
chr8 (149-210)||(632039-632100)
chr8 (149-210)||(817851-817912)
chr8 (1-216)||(7280895-7281104)
chr8 (1-65)||(7269377-7269441)
chr8 (149-216)||(31874361-31874428)
chr8 (143-216)||(14530682-14530755)
chr8 (2-39)||(16809014-16809051)
chr8 (158-210)||(27534184-27534236)
[»] chr2 (68 HSPs)
chr2 (1-216)||(15673734-15673945)
chr2 (1-216)||(19580768-19580979)
chr2 (1-215)||(10589232-10589442)
chr2 (1-215)||(37883790-37884000)
chr2 (1-210)||(26491439-26491643)
chr2 (1-215)||(4878503-4878713)
chr2 (1-209)||(7443339-7443543)
chr2 (1-216)||(7640122-7640333)
chr2 (1-215)||(27023906-27024116)
chr2 (1-215)||(29734327-29734539)
chr2 (2-216)||(36508067-36508277)
chr2 (1-216)||(43567010-43567221)
chr2 (1-216)||(25516629-25516840)
chr2 (14-216)||(20036532-20036730)
chr2 (1-216)||(41176995-41177206)
chr2 (1-215)||(25771582-25771792)
chr2 (1-216)||(13268709-13268920)
chr2 (1-216)||(43929066-43929277)
chr2 (1-215)||(44167478-44167688)
chr2 (1-217)||(2251112-2251322)
chr2 (1-215)||(27191100-27191314)
chr2 (1-215)||(27840914-27841128)
chr2 (1-216)||(25622810-25623022)
chr2 (1-216)||(3465066-3465277)
chr2 (1-216)||(25237097-25237303)
chr2 (1-215)||(40125526-40125732)
chr2 (3-216)||(6090029-6090237)
chr2 (1-84)||(24500624-24500706)
chr2 (1-210)||(38822209-38822414)
chr2 (15-172)||(42105576-42105727)
chr2 (5-216)||(5930564-5930771)
chr2 (56-216)||(12366060-12366216)
chr2 (1-70)||(19953707-19953776)
chr2 (29-215)||(3390588-3390770)
chr2 (3-205)||(28228361-28228559)
chr2 (1-84)||(16879860-16879942)
chr2 (1-84)||(16991993-16992075)
chr2 (1-84)||(44951556-44951638)
chr2 (1-67)||(11550507-11550573)
chr2 (96-210)||(18141253-18141367)
chr2 (3-209)||(9715317-9715519)
chr2 (1-215)||(16720615-16720825)
chr2 (134-216)||(3603251-3603333)
chr2 (133-215)||(44441644-44441726)
chr2 (3-210)||(3397751-3397954)
chr2 (99-216)||(4732307-4732424)
chr2 (97-216)||(11798295-11798415)
chr2 (1-167)||(29812430-29812592)
chr2 (153-216)||(11931157-11931220)
chr2 (97-216)||(15920103-15920222)
chr2 (1-210)||(17118586-17118790)
chr2 (113-210)||(4604080-4604176)
chr2 (1-216)||(5071136-5071347)
chr2 (1-210)||(17068688-17068892)
chr2 (2-210)||(17056241-17056444)
chr2 (162-216)||(32015562-32015616)
chr2 (36-216)||(35353812-35353988)
chr2 (97-170)||(5754517-5754590)
chr2 (158-210)||(17095258-17095310)
chr2 (132-216)||(34480229-34480313)
chr2 (1-65)||(44441519-44441583)
chr2 (149-216)||(7072732-7072799)
chr2 (99-210)||(8027776-8027887)
chr2 (99-170)||(12704924-12704995)
chr2 (97-207)||(6431184-6431294)
chr2 (99-215)||(25068087-25068203)
chr2 (99-215)||(38384225-38384341)
chr2 (142-210)||(45041095-45041163)
[»] chr3 (63 HSPs)
chr3 (1-215)||(913083-913293)
chr3 (1-215)||(40797170-40797380)
chr3 (1-216)||(22844189-22844400)
chr3 (1-215)||(43029820-43030030)
chr3 (1-216)||(28995075-28995286)
chr3 (1-216)||(50519920-50520131)
chr3 (1-215)||(1165163-1165373)
chr3 (1-216)||(3088430-3088641)
chr3 (1-216)||(22286517-22286728)
chr3 (1-207)||(39340336-39340538)
chr3 (1-210)||(34767123-34767328)
chr3 (1-216)||(4019732-4019946)
chr3 (16-216)||(21586051-21586247)
chr3 (1-216)||(32237762-32237973)
chr3 (5-216)||(45664362-45664569)
chr3 (1-206)||(32089707-32089907)
chr3 (9-215)||(42106283-42106485)
chr3 (1-210)||(29776462-29776667)
chr3 (15-216)||(50460341-50460538)
chr3 (1-216)||(33977691-33977902)
chr3 (3-216)||(20203006-20203215)
chr3 (1-216)||(29182376-29182585)
chr3 (1-204)||(37051733-37051930)
chr3 (3-207)||(53426937-53427137)
chr3 (1-216)||(11846686-11846896)
chr3 (5-216)||(43839283-43839490)
chr3 (1-216)||(54240223-54240434)
chr3 (3-216)||(20200824-20201033)
chr3 (8-210)||(33076428-33076627)
chr3 (1-84)||(41882305-41882387)
chr3 (1-71)||(25939386-25939456)
chr3 (18-216)||(27831253-27831447)
chr3 (1-210)||(2598216-2598420)
chr3 (104-215)||(48652216-48652327)
chr3 (1-71)||(1220154-1220224)
chr3 (149-215)||(10977524-10977590)
chr3 (1-69)||(14741234-14741303)
chr3 (87-216)||(21803750-21803879)
chr3 (6-121)||(36540535-36540646)
chr3 (18-174)||(26412442-26412596)
chr3 (99-215)||(49627871-49627987)
chr3 (99-215)||(55446294-55446410)
chr3 (99-170)||(36691620-36691691)
chr3 (1-71)||(7656422-7656492)
chr3 (3-49)||(22893644-22893690)
chr3 (133-210)||(47587145-47587222)
chr3 (112-216)||(34103523-34103627)
chr3 (99-215)||(55455108-55455224)
chr3 (1-40)||(25374008-25374047)
chr3 (1-68)||(40461905-40461972)
chr3 (106-216)||(30156056-30156166)
chr3 (99-169)||(35174945-35175015)
chr3 (150-216)||(36540463-36540529)
chr3 (1-71)||(40365363-40365432)
chr3 (149-215)||(48401132-48401198)
chr3 (149-215)||(48401388-48401454)
chr3 (87-215)||(105814-105945)
chr3 (97-170)||(4206375-4206448)
chr3 (126-170)||(13701823-13701867)
chr3 (106-210)||(21084510-21084614)
chr3 (1-84)||(47914488-47914571)
chr3 (32-68)||(48060999-48061035)
chr3 (114-170)||(51990696-51990752)
[»] chr6 (38 HSPs)
chr6 (1-215)||(10744720-10744929)
chr6 (3-216)||(20496332-20496541)
chr6 (1-216)||(23843190-23843401)
chr6 (3-216)||(4663586-4663795)
chr6 (1-210)||(12576253-12576458)
chr6 (1-208)||(32804432-32804635)
chr6 (1-215)||(11426078-11426292)
chr6 (1-210)||(19759925-19760130)
chr6 (1-215)||(31804357-31804563)
chr6 (1-216)||(13233874-13234085)
chr6 (1-216)||(15127896-15128106)
chr6 (1-216)||(31748094-31748305)
chr6 (1-216)||(7049382-7049593)
chr6 (1-210)||(1944233-1944438)
chr6 (1-216)||(20845145-20845356)
chr6 (1-82)||(904405-904485)
chr6 (87-216)||(5416990-5417119)
chr6 (1-70)||(8644382-8644451)
chr6 (15-174)||(33194756-33194900)
chr6 (12-166)||(548682-548832)
chr6 (1-210)||(8632968-8633169)
chr6 (149-216)||(8644509-8644576)
chr6 (1-71)||(5544844-5544914)
chr6 (97-215)||(12654077-12654195)
chr6 (155-216)||(16913612-16913673)
chr6 (18-69)||(891742-891793)
chr6 (104-215)||(12481138-12481249)
chr6 (9-70)||(12652105-12652166)
chr6 (87-170)||(13871439-13871522)
chr6 (15-70)||(20744988-20745043)
chr6 (1-71)||(34020742-34020810)
chr6 (142-216)||(2488411-2488485)
chr6 (104-174)||(12652009-12652079)
chr6 (1-71)||(16913464-16913533)
chr6 (96-170)||(29284977-29285051)
chr6 (1-67)||(32457783-32457848)
chr6 (3-84)||(22530419-22530498)
chr6 (1-37)||(5417139-5417175)
[»] scaffold0340 (1 HSPs)
scaffold0340 (4-189)||(11569-11752)
[»] scaffold0722 (1 HSPs)
scaffold0722 (1-209)||(5299-5503)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-215)||(11970-12180)
[»] scaffold0018 (2 HSPs)
scaffold0018 (55-216)||(136840-136997)
scaffold0018 (1-34)||(137002-137035)
[»] scaffold0024 (1 HSPs)
scaffold0024 (29-216)||(36689-36872)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-216)||(244773-244982)
[»] scaffold0045 (1 HSPs)
scaffold0045 (3-216)||(9424-9633)
[»] scaffold0665 (1 HSPs)
scaffold0665 (2-139)||(970-1103)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-71)||(11151-11221)
[»] scaffold0157 (1 HSPs)
scaffold0157 (5-70)||(1049-1114)
[»] scaffold1294 (1 HSPs)
scaffold1294 (1-210)||(917-1117)
[»] scaffold0627 (1 HSPs)
scaffold0627 (7-70)||(6695-6758)
[»] scaffold0150 (2 HSPs)
scaffold0150 (149-216)||(10095-10162)
scaffold0150 (1-50)||(10239-10288)
[»] scaffold0432 (1 HSPs)
scaffold0432 (97-170)||(2255-2328)
[»] scaffold0155 (1 HSPs)
scaffold0155 (99-216)||(35321-35438)
[»] scaffold0009 (1 HSPs)
scaffold0009 (99-207)||(105271-105379)


Alignment Details
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 26199717 - 26199928
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||   |||||||||||    
T  26199717 cgtctttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgttcgattcaggttgtcagatcag-cttcgatccagtac---aaatcaaatca 26199812  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||| |||||||||||||| ||||  | ||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  26199813 atgactttgaagtcgtcaacgatgcagatccgaagacatacgtattatggagacttaaatatagtcatatgtgtaggctttaatactttgttgttttatg 26199912  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  26199913 ctattaacatggatgt 26199928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 44513975 - 44513768
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||   ||| ||||||||||| |    
T  44513975 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcag-cttcgatccagt---gcagatcaaatcaatga 44513880  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    ||||||||||||||||| || ||||  |||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||    
T  44513879 ctttggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgctgttttatgttat 44513780  T
Q  205 taacattgatgt 216  Q
    |||||| |||||    
T  44513779 taacatggatgt 44513768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27469685 - 27469475
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||   |||| |||||||||    
T  27469685 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtaattgttcaatttagattgtcagatca-gcttcgatccag---tgcagatcaaatca 27469590  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    ||  ||||||||||||||||| || ||||  |||||||| | |||||| |||| ||||||||||||||| |||| |||||||||||||||   |||||||    
T  27469589 atggctttggagtcgtcaacgttgcagatccggagacatggatattctagagagttaaatatagtcataagtgtaggctttaatactttgtcattttatg 27469490  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  27469489 ctattaacatggatg 27469475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 52839669 - 52839878
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||   ||| |||||||||||    
T  52839669 tctttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagattgtcagatcag-cttcgatccagt---gcagatcaaatcaat 52839764  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     |||||||||||||||||| || | || ||||||||| ||||||  ||| |||||| ||||||| ||||||| ||||||| |||||||| ||||||||||    
T  52839765 gactttggagtcgtcaacgttgcaaatctggagacatgggtatttcggaaacttaactatagtcgtatgtgtaggctttagtactttgccgttttatgct 52839864  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  52839865 attaacatggatgt 52839878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 33703487 - 33703282
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||| || ||||||||   | | |||||||||    
T  33703487 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcacgtatttgtttgattcagattgtcagatcaggttt-gatccagt---gtagatcaaatca 33703392  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||| |||||||| || ||||  | |||||| | |||||  ||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  33703391 atgactttggagccgtcaacgttggagatccgtagacatggatattccagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 33703292  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  33703291 ctattaacat 33703282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8893430 - 8893640
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||| |||| |||||||   |||||||| |||||    
T  8893430 cgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattttcagatca-gcttagatccag---tgcaaatccaatca 8893525  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  |||||||||| || ||||  |||||||||||||||| ||||| || ||||||||||||||||| ||||||  |||| || |||||||||    
T  8893526 atgactttgacgtcgtcaacgttgtagatccggagacataggtattccggaga-ttgaatatagtcatatgtgtaggcttttgtactctgttgttttatg 8893624  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  8893625 ctattaacatggatgt 8893640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 12148021 - 12147815
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||   ||| || |||  ||| |    
T  12148021 tttgtgcaacattgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcaa-cttcgatctagt---gcagataaaaagaatga 12147926  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    ||||||||||||||||| || | ||  |||||||| ||||||| |||||||||| ||||||||||||||| ||||||| |||||||  |||||||||||     
T  12147925 ctttggagtcgtcaacgttgcaaatccggagacatgggtattccggagacttaagtatagtcatatgtgtaggctttagtactttgtcgttttatgctac 12147826  T
Q  205 taacattgatg 215  Q
    |||||| ||||    
T  12147825 taacatggatg 12147815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 210
Target Start/End: Original strand, 11121115 - 11121318
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||| ||||||||||||   |||| |||||||||||    
T  11121115 tctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattgtcagatca-gcttcgatccag---tgcagatcaaatcaat 11121210  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||||||| |||||  || ||||  ||||||||| |||||| ||||| ||||||| |||||||||||| ||| | | |||||||  ||||||| ||    
T  11121211 gactttggagtcttcaacattgcagatccggagacatatgtattccggagatttaaatacagtcatatgtgtaggcctgagtactttgtcgttttatact 11121310  T
Q  203 attaacat 210  Q
    ||||||||    
T  11121311 attaacat 11121318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 12967709 - 12967499
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  12967709 cgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcatatccaatca 12967614  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || |||| |||||||||   ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  12967613 atgactttggtgtcatccacgttgtagatctggagacatgattattccggaga-ttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 12967515  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  12967514 ctattaacatggatgt 12967499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 21326610 - 21326821
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  21326610 cgtctttgtgcgacgttgtttgtctttcttgtttttctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 21326705  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| | ||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  21326706 atgactttggcgtcatccacgttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 21326805  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  21326806 ctattaacatggatgt 21326821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 22344889 - 22344679
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  22344889 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 22344794  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||   |  |||||| ||||||||||    
T  22344793 atgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggtaattgtactttactgttttatg 22344694  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  22344693 ctattaacatggatg 22344679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33177574 - 33177364
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| ||||||||||| ||| |||||| ||||| ||||||||||  |||||||||||||||||  ||| ||||||||   ||| ||| |||||    
T  33177574 cgtctttgtgcaacgttgtttgtgttt-ttgttttgttcatgtatttgttcggttcagattgtcagatcaa-cttagatccagt---gcagatccaatca 33177480  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| |||||||||  || | ||  ||||||||  ||||| ||||||||| ||||||||||||||||| ||||||  |||||||| ||||||||    
T  33177479 atgactttggtgtcgtcaacattgcaaatccggagacatgagtattatggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatg 33177380  T
Q  201 ctattaacattgatgt 216  Q
    | |||||||| |||||    
T  33177379 caattaacatggatgt 33177364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 37685067 - 37684854
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||  |||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||| ||||||||||||   |||| || |||| |    
T  37685067 cgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattgtcagatca-gcttcgatccag---tgcagattaaatta 37684972  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatacttt---gctgtttt 197  Q
    || |||||||||||||||||| || ||||  |||||||   | ||| | |||||||||||||||||||| |||| ||||||| || |||   || |||||    
T  37684971 atgactttggagtcgtcaacgttgcagatccggagacacgagcattttagagacttaaatatagtcatacgtgtaggctttagtaatttgccgccgtttt 37684872  T
Q  198 atgctattaacattgatg 215  Q
    |||| |||||||| ||||    
T  37684871 atgcaattaacatggatg 37684854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 37700450 - 37700663
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||  |||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||| ||||||||||||   |||| || |||| |    
T  37700450 cgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcagattgtcagatca-gcttcgatccag---tgcagattaaatta 37700545  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatacttt---gctgtttt 197  Q
    || |||||||||||||||||| || ||||  |||||||   | ||| | |||||||||||||||||||| |||| ||||||| || |||   || |||||    
T  37700546 atgactttggagtcgtcaacgttgcagatccggagacacgagcattttagagacttaaatatagtcatacgtgtaggctttagtaatttgccgccgtttt 37700645  T
Q  198 atgctattaacattgatg 215  Q
    |||| |||||||| ||||    
T  37700646 atgcaattaacatggatg 37700663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 44562726 - 44562515
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||| |   ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  44562726 cgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgataggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 44562631  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||||||||   ||||| ||||| |||||||||||||||||||| ||| ||  ||  |||| ||||||||    
T  44562630 atgactttggcgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtatcttgccgttttatg 44562531  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  44562530 ctattaacatggatgt 44562515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6212891 - 6212680
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||| || |||||  ||||||||||| ||||||||| ||   |||| ||| |||||    
T  6212891 cgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgattcatgttgtcagatca-gcttcgatcaag---tgcagatccaatca 6212796  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| ||||||||||||||||| || |||  |  |||||||| ||||||||    
T  6212795 atgactttggcgtcatccacgttgtagatccggagacatggttattccggagatttaaatatagtcatatgggtaggcaattgtactttgccgttttatg 6212696  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  6212695 ctattaacatggatgt 6212680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 46589284 - 46589495
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| || |||||||||||||||||||| ||| ||||||||||  ||||||||||||||||| | ||| || |||| |   ||||||| |||    
T  46589284 cgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgttcggttcagattgtcagatca-gtttcaattcagtgc--aaaatcaattca 46589380  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||| || ||||  ||| ||||  |||||   |||||||||||||| |||||||||| | ||||| |||||||  ||||||||    
T  46589381 atgactttggagtcctcaacgttgcagatccggacacatgagtatttcagagacttaaatatactcatatgtgtagactttagtactttgtcgttttatg 46589480  T
Q  201 ctattaacattgatg 215  Q
     ||||||||| ||||    
T  46589481 ttattaacatggatg 46589495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 38646721 - 38646932
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||   |  ||||||||| |||||||| |||||||| |||   | | |||||||||    
T  38646721 cgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttaaccggttcagattgccagatcag-cttcgatctagt---gtagatcaaatca 38646816  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||||||||| |||||||||||||||||||| | | ||  ||||||||  |||||||    
T  38646817 atgactttggcgtcatccacgttgcagatccggagacatggttattctggagatttaaatatagtcatatgtgtagacatttgtactttgcctttttatg 38646916  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  38646917 ctattaacatggatgt 38646932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 5832375 - 5832540
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||  |||||||||||||| || ||||||||||||   |||| ||| ||||||| |    
T  5832375 tttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagacca-gcttcgatccag---tgcagatctaatcaatga 5832470  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    |||||  ||| || ||| || |||| |||||||||   ||||| ||||| ||||||||||||||||||||    
T  5832471 ctttgacgtcatccacgttgcagatctggagacatgattattccggagatttaaatatagtcatatgtgt 5832540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 2350759 - 2350970
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||| |||||||||||||||||||||    ||| |||||||| |||||||  ||| ||||||||||| || |||| |||||||   ||||||| || ||    
T  2350759 cgtctctgtgcgacgttgtttgtcttttcccttttgttcaggtgtttgttcggttcggattgtcagattag-cttcaatccagt---gcaaatccaacca 2350854  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |||||| || ||||  | || ||||| ||||| ||||| || ||||||||||||| ||| ||||||  |||||||| ||||||||    
T  2350855 atgactttggcgtcatcaacgttgcagatccgaaggcatagctattccggagattttaatatagtcatatttgtaggcttttgtactttgccgttttatg 2350954  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  2350955 ctattaacatggatgt 2350970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 23257225 - 23257436
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| |   | |||||||||  || || ||||||||||   ||||| ||| |||||    
T  23257225 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgattggtccagattgtctaattag-cttcgatcca---ctgcagatccaatca 23257320  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| ||||   ||||| ||||| ||| |||||||||||||||| ||| ||  |||||||||||||| ||    
T  23257321 atgactttggcgtcatccacgttgcagatccggatacatgattattccggagatttagatatagtcatatgtgtaggcatttgtactttgctgttttgtg 23257420  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  23257421 ctattaacatggatgt 23257436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 36621489 - 36621699
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| | |||||| ||||||||||| |||||||||||| ||  |||||||||||| ||||  ||| |||||||   |||||||| |||||    
T  36621489 cgtctttgtgcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagattgtcacatca-actttgatccag---tgcaaatccaatca 36621584  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||  || || ||| || ||||  |||||||| | |||||  |||| ||||||||| |||||||||| ||| ||  ||||||||  |||||||    
T  36621585 atgactttggcatcatccacgttgcagatccggagacat-gttattccagagatttaaatataatcatatgtgtaggcatttgtactttgccattttatg 36621683  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  36621684 ctattaacatggatgt 36621699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15276427 - 15276212
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtct----ttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaa 96  Q
    ||||||||||||| ||||||| | |    ||||||||||  ||||||||||| ||  |||||||||| |||||| ||||||||||||   |||| ||| |    
T  15276427 cgtctttgtgcgatgttgttttttttttcttcttgtttctctcaggtatttgatcggttcagattgtgagatca-gcttcgatccag---tgcagatcca 15276332  T
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||||| ||| || ||| || |||| |||||||||   |||||  |||| |||||||||||||||||||| ||| ||  ||| |||| ||||    
T  15276331 atcaatgactttggcgtcatccacgttgcagatctggagacatgattattccagagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttt 15276232  T
Q  197 tatgctattaacattgatgt 216  Q
    |||||||||||||| |||||    
T  15276231 tatgctattaacatggatgt 15276212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 4564653 - 4564822
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||| ||||  ||||||||||| ||  |||||||||||||||||| ||||||||||||   ||| ||  |||||    
T  4564653 cgtctttgtgcgacgttgtttgtttttcttatttctctcaggtatttgatcgcttcagattgtcagatcag-cttcgatccagt---gcagattcaatca 4564748  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    || ||||||| ||| || ||  || ||||  ||| |||| | ||||| ||||| ||||||||||||||||||||    
T  4564749 atgactttggtgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgt 4564822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28213185 - 28213267
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||||||||| | |||||||||||    
T  28213185 cgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttcagattgtcagatca-gattcgatccagt 28213267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 630761 - 630550
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||| ||||||||||||||  ||| ||||||| ||  |  ||||||||||| || ||||||||||||   |||| ||| |||||    
T  630761 cgtctttgtgcgacgttgttcgtctttcttgtttctctcaagtatttgatcggtcaagattgtcagacca-gcttcgatccag---tgcagatctaatca 630666  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || |||  ||||||||| | ||||| ||||| |||||||||||||||||||| | | ||  ||| ||||   ||||||    
T  630665 atgactttgacgtcatccacgttgcagacctggagacatggttattccggagatttaaatatagtcatatgtgtagacatttgtaccttgccactttatg 630566  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  630565 ctattaacatggatgt 630550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10264846 - 10264915
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  10264846 cgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatca 10264915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 38644774 - 38644563
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||| |    |||||||||||||||||  |||||||||||   ||| ||  ||||     
T  38644774 cgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgattggctcagattgtcagatcagt-ttcgatccagt---gcagattcaatcc 38644679  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | | ||||||| || ||| || ||||   ||||||| | ||||| ||||| ||||| |||||||||||||| ||| ||  |||||||| ||||||||    
T  38644678 atgattgtggagtcatccacgttgcagatccagagacatggttattccggagatttaaaaatagtcatatgtgtaggcatttgtactttgccgttttatg 38644579  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  38644578 ctattaacatggatgt 38644563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 45659151 - 45659362
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||| |||| |||||||||||  | ||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  45659151 cgtctttgtgcgacgttggttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 45659246  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  | | |||| | |||||   ||| |||| ||||||||||||||| ||| ||  ||||||| ||||||||     
T  45659247 atgactttgacgtcatctacgttgtagatccgaaaacatggttattccaaagatttaagtatagtcatatgtgtaggcatttgtactttggtgttttata 45659346  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  45659347 ctattaacatggatgt 45659362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 14717247 - 14717039
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  |||| |||||| ||  ||||||||||||||||||  |||||||||||   ||| ||| |||||    
T  14717247 cgtctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcaga-ttcgatccagt---gcagatccaatca 14717152  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || || |||| ||| || ||| || ||||  ||||| || | ||||  ||||| ||||||||||||||  |||| |||  |  |||||||| ||||||||    
T  14717151 atgacattggcgtcatccacgttgcagatccggagaaatggttatttcggagatttaaatatagtcat--gtgtaggcaattgtactttgc-gttttatg 14717055  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  14717054 ctattaacatggatgt 14717039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29067186 - 29067394
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||  ||||||||||||||||||||| ||||| |||||| |||  |||| ||| ||||||||| |||||||| |||   ||||||  |||||    
T  29067186 cgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaattttcagatcag-cttcgatcaagt---gcaaattcaatca 29067281  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    ||  |||||| ||||| ||   || ||||   ||||||| | |||||||||| ||| || |||||||||||||| ||||||  |||||||  ||||||||    
T  29067282 atg-ctttggcgtcgttaatt-tgcagatcctgagacatggatattctggaggcttgaaaatagtcatatgtgtaggcttttgtactttgtcgttttatg 29067379  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  29067380 ctattaacatggatg 29067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23320577 - 23320659
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||||||| |||||||||||||||||  ||| ||||||| ||  ||||||||||||||||| |||||||||||||    
T  23320577 cgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttgatcggttcagattgtcagatca-gcttcgatccagt 23320659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 47551314 - 47551443
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||| ||||||| ||||||  |||||||||| || ||||  ||| ||||  ||||||||||||||| ||||||||||||| ||| ||| |  ||||    
T  47551314 tgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatagatac 47551413  T
Q  187 tttgctgttttatgctattaacattgatgt 216  Q
    |||||  ||||||||||||||||| |||||    
T  47551414 tttgccattttatgctattaacatagatgt 47551443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 26771325 - 26771448
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||| ||||||||||||||  |||||||||| || ||||  | ||||||   ||||  |||||||| ||||||||||||||||| ||||||  |||    
T  26771325 tgcagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcatatgtgtaggcttttgtac 26771424  T
Q  187 tttgctgttttatgctattaacat 210  Q
    ||||  ||||||||||||||||||    
T  26771425 tttgtcgttttatgctattaacat 26771448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 32539167 - 32538962
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaa-ttcagattgtcagatcaggcttcgatccagtactgcaaatcaaatc 99  Q
    ||||||||||||||||||||||| ||| |||||| || || |||||||||    |||||||||||||||| | ||||||| ||||   ||||||| ||||    
T  32539167 cgtctttgtgcgacgttgtttgtttttattgttttgtccatgtatttgttttggttcagattgtcagatctg-cttcgattcagt---gcaaatccaatc 32539072  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtatt-ctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    ||| ||||||| || ||| |   || ||||| ||||||||  ||||| | ||| |||| ||||||||||| || || ||||||  |||||||||||  ||    
T  32539071 aatgactttggcgttgtccatattgcagattcggagacatgcgtatttcgggaaacttgaatatagtcatttgcgtaggcttttgtactttgctgtcgta 32538972  T
Q  199 tgctattaac 208  Q
    ||||||||||    
T  32538971 tgctattaac 32538962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 49652054 - 49652177
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||||||| ||||||| ||||||| ||| || ||  || ||||   ||||||| | ||| ||||||| |||||||||||||||||||| ||| ||  |||    
T  49652054 tgcaaatccaatcaatgactttggcgtcatctacattgcagatcctgagacatggttatcctggagatttaaatatagtcatatgtgtaggcatttgtac 49652153  T
Q  187 tttgctgttttatgctattaacat 210  Q
     |||||||||||||||||||||||    
T  49652154 cttgctgttttatgctattaacat 49652177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 28678014 - 28677897
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || |||| |||||||||  ||||||  ||||| ||||||||||||||| ||| ||| |   |||||| | ||||||    
T  28678014 caatgactttggtgtcgtcaacgttgcagatatggagacatgagtattcgagagacataaatatagtcatatttgtaggcataggtacttttccgtttta 28677915  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  28677914 tgctattaacatggatgt 28677897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 34659536 - 34659407
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||| ||||||| ||||||| |||||||||  || ||||  ||||| || |||||||   |||||| |||||||||||| |||| ||||||  |||    
T  34659536 tgcagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattccaaagacttgaatatagtcataagtgtaggcttttttac 34659437  T
Q  187 tttgctgttttatgctattaacattgatgt 216  Q
    |||||  ||||||||||||||||| |||||    
T  34659436 tttgccattttatgctattaacatggatgt 34659407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48655018 - 48654954
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtca 65  Q
    ||||||||| | ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||    
T  48655018 cgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgtttagttcagattgtca 48654954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22032068 - 22031986
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||| || | ||||||||| |||||||||||||||| |||||||||||| |||| ||||||||| || | |||||||||||    
T  22032068 cgtctttatgtggcgttgtttgcctttcttgtttcgttccggtatttgttcagttcatattgtcagacca-gtttcgatccagt 22031986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 34566825 - 34567029
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||  |   | ||||| || ||||||| |||||||||||||||||||  |||||||||||   ||| ||| || ||    
T  34566825 cgtctttgtgcgacgttgtttgtcttt--tccctggttcaagtgtttgttcgattcagattgtcagatcagt-ttcgatccagt---gcagatccaacca 34566918  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| | ||||      ||| |||| ||| | ||||  ||||| || ||||||||||||| ||| |||||   |||||||| ||||||||    
T  34566919 atgactttggcgtcattaacgt-----attcggaggcatggctatttcggagattttaatatagtcatatttgtaggcttatgtactttgccgttttatg 34567013  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  34567014 ctattaacatggatgt 34567029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 15698336 - 15698546
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||| |||||||||||||| ||| |||||||  ||||||||||| |   ||||||||||||||||| |||||||||| |   |||| ||  |||||    
T  15698336 cgtctttgggcgacgttgtttgt-tttgttgtttctctcaggtatttgattggttcagattgtcagatca-gcttcgatccgg---tgcagattcaatca 15698430  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||    | |||| | ||||| | ||| ||||| |||||||||||||| |||  |  ||  |||| ||||||||    
T  15698431 atgactttggcgtcatccacgttgcagatccaaaaacatggttattccgaagatttaaaaatagtcatatgtgtaggcaattgtatgttgccgttttatg 15698530  T
Q  201 ctattaacattgatgt 216  Q
    ||||||||||||||||    
T  15698531 ctattaacattgatgt 15698546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 32878937 - 32879050
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||||| |||||||||| || ||||  ||||||||  |||||| | | |||| ||||||||||||| ||| ||| | | |||||||  ||||    
T  32878937 atcaatgactttggtgtcgtcaacgttgtagatccggagacatgagtattccgaaaacttgaatatagtcatatttgtaggcataagtactttgtcgttt 32879036  T
Q  197 tatgctattaacat 210  Q
    ||||||||||||||    
T  32879037 tatgctattaacat 32879050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 47392275 - 47392484
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||||||||  || || || |||||||| |||| |||||||   || | ||| ||| |    
T  47392275 cgtctttgtgcggcgttgtttgtcttt-ttgtttcgttcagatatttgttcggtttaggttttcagatca-gctt-gatccag---tgtagatccaataa 47392368  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| |||||| ||| || ||||  | |||||| |||  |   ||||||| |||||||||||||||||  |||||  |||||||  |||||| |    
T  47392369 atgactttggcgtcgtccacgttgtagatccgaagacattggttcttcagagacttgaatatagtcatatgtgtatgcttttgtactttgtcgttttacg 47392468  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  47392469 ttattaacatggatgt 47392484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 10877484 - 10877694
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    ||||||||| | |||||||||||||||||||||| || | ||||| ||||  |||| ||||||| ||||   ||| ||||||   |||| ||  ||||||    
T  10877484 gtctttgtgtggcgttgtttgtctttcttgtttcatttatgtattggttcggttcatattgtcatatca-ttttcaatccag---tgcagattcaatcaa 10877579  T
Q  102 taactttgg-agtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    | |||||||  |||| ||||| || | || |||||||||  ||||||  |||| || ||| ||||||||||||| ||||||  |||||||  ||||||||    
T  10877580 tgactttggccgtcggcaacgttgtaaatctggagacatgtgtattccagagaattgaatgtagtcatatgtgtaggcttttgtactttgtcgttttatg 10877679  T
Q  201 ctattaacattgatg 215  Q
    |||||| ||| ||||    
T  10877680 ctattagcatcgatg 10877694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 40862712 - 40862592
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtt 195  Q
    ||||||| | ||||| |||||||||| || ||||   |||||||  |||||||| ||||| |||||||||||||| ||| ||| | | |||| ||  |||    
T  40862712 aatcaatgattttggcgtcgtcaacgttgcagatccagagacatgagtattctgaagactaaaatatagtcatatttgtaggcataagtactctgtcgtt 40862613  T
Q  196 ttatgctattaacattgatgt 216  Q
    ||||||||||||||| |||||    
T  40862612 ttatgctattaacatggatgt 40862592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 35077866 - 35077796
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtac 86  Q
    ||||||||||||||||| |||||||| ||||||||||| || ||||||||| ||| ||||| |||| |||||    
T  35077866 gttgtttgtctttcttgattcgttcaagtatttgttcagtttagattgtcatatc-ggcttagatctagtac 35077796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 210
Target Start/End: Original strand, 171292 - 171362
Alignment:
Q  140 aggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| |||||||| |||||| |||||| ||| ||||||  |||||||  ||||||||||||||||||    
T  171292 aggtattccggagacttgaatataatcatatatgtaggcttttgtactttgtcgttttatgctattaacat 171362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 216
Target Start/End: Complemental strand, 13691705 - 13691529
Alignment:
Q  36 gttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggag 135  Q
    |||||||| ||||||| ||||||||||||| ||||  |||||||| |||   ||||||| ||  ||| ||||||  ||| |||||| || |||| |||||    
T  13691705 gttcaggtgtttgttcgattcagattgtcaaatcat-cttcgatctagt---gcaaatccaactaatgactttgacgtcatcaacgttgcagatctggag 13691610  T
Q  136 acataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
     |||   |||||  |||| || ||||||||||||| ||| |||||   || ||||| |||||||||||||||||| |||||    
T  13691609 gcatgactattccagagattttaatatagtcatatttgtaggcttatgtattttgccgttttatgctattaacatggatgt 13691529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 18343849 - 18343959
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||||||||  | |||| |||||||| ||||||||||||| ||| ||| |   ||| |||| ||||||    
T  18343849 caatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcatgggtaccttgccgtttta 18343948  T
Q  199 tgctattaaca 209  Q
    |||||||||||    
T  18343949 tgctattaaca 18343959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 1768202 - 1768275
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| ||||| ||||| |||||||||| ||| ||| ||  |||||||| |||||||||||||||||| |||||    
T  1768202 tattcaggagatttaaacatagtcatatttgtaggcatttgtactttgccgttttatgctattaacatggatgt 1768275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40488374 - 40488325
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgtt 50  Q
    ||||||||||||||||| | |||||||||||||| || ||||||||||||    
T  40488374 cgtctttgtgcgacgttatctgtctttcttgtttagtccaggtatttgtt 40488325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 45193505 - 45193441
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||| |||||||||| || ||||  ||||||||  ||||| |||||||||||||||||||||||    
T  45193505 tttggcgtcgtcaacgttgcagatccggagacatgagtattttggagacttaaatatagtcatat 45193441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 15391136 - 15391065
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| ||||||| |||||||||| || |||| |||||||||  |||||| |||||| | |||||||||||||    
T  15391136 caatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccggagacatgaatatagtcatat 15391065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 42276592 - 42276663
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| ||||||| |||||||||| || ||||| ||||||||  |||||| |||||| | |||||||||||||    
T  42276592 caatgactttggcgtcgtcaacgttgcagattcggagacatgagtattccggagacatgaatatagtcatat 42276663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 51418221 - 51418292
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| ||||||| |||||||||| || ||||  ||||||| | ||||||||||||||| ||||||| |||||    
T  51418221 caatgactttggcgtcgtcaacgttgtagatccggagacagaagtattctggagacttgaatataggcatat 51418292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 49651981 - 49652015
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttc 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  49651981 cgtctttgtacgacgttgtttgtctttcttgtttc 49652015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 900231 - 900299
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    ||||||||||| || |||||||||||| ||||||||| ||| ||| |||||  |||||||||||| ||||    
T  900231 cgtctttgtgcaac-ttgtttgtcttttttgtttcgtccagatatctgttcggttcagattgtcatatca 900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 8224393 - 8224514
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||| ||| ||| ||||||| ||||||||||||| |||| | ||| |||  |||||  ||||| || |||||||||| || ||  |||||| ||||    
T  8224393 tgcatatctaattaatgactttggcgtcgtcaacgatgcagatctagaggcatgagtatttcggagatttgaatatagtcaaatttgcaggcttttatac 8224492  T
Q  187 tttgctgttttatgctattaac 208  Q
    ||||  |||||||| |||||||    
T  8224493 tttgtcgttttatgttattaac 8224514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 40992447 - 40992492
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttg 48  Q
    |||| |||||||||||||||| |||||||||||  |||||||||||    
T  40992447 tcttcgtgcgacgttgtttgtgtttcttgtttctctcaggtatttg 40992492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 10304806 - 10304926
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtt 195  Q
    ||||||| ||||| |  ||||||||| || ||||| |||||||| | ||||| | |||||| ||||||||||||| |||  || |  ||||| |||  ||    
T  10304806 aatcaatgactttagcatcgtcaacgttgcagattcggagacatggatattccgaagacttgaatatagtcatatttgtatgcatagatactctgcaatt 10304905  T
Q  196 ttatgctattaacattgatgt 216  Q
    |||||||||||| || |||||    
T  10304906 ttatgctattaaaatggatgt 10304926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14346568 - 14346778
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||   |||||||||||||    
T  14346568 cgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgctcgattcagattgtcagatcag-cttcgatccagt---gcaaatcaaatca 14346663  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||  |||| |||  ||||||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  14346664 atgactttggagtcgtcaacgttgcagatccggagccatgtgtattctagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 14346763  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  14346764 ctattaacatggatg 14346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 15729958 - 15729748
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||   ||| |||||||||    
T  15729958 cgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagattgtcagatcaa-cttcgatccagt---gcagatcaaatca 15729863  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | |||||||||||||| | || ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||| |||| | |    
T  15729862 atgattttggagtcgtcaatgttgcagattcggagacataggtatttcggagacttaaatatagtcatatgtgtaggctttagtactttgccgtttcacg 15729763  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  15729762 ctattaacatggatg 15729748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 29474305 - 29474094
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||| ||  ||||||||||||   ||| |||||||||    
T  29474305 cgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagattgtcagaccat-cttcgatccagt---gcagatcaaatca 29474210  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||  |||||||| ||||||| |||| ||||||||||||||||||||| | ||||| |||||||| ||||||||    
T  29474209 atgactttggagtcgtcaacgttgcagatccggagacatgggtattccggaggcttaaatatagtcatatgtgtagtctttagtactttgccgttttatg 29474110  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  29474109 ctattaacatggatgt 29474094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 46728897 - 46728687
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||   ||| |||||||||    
T  46728897 cgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcag-cttcgatccagt---gcagatcaaatca 46728802  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||| ||||||||||| || | ||| |||||||| |||||||  ||||||||||||||||||||||||| ||||||| |||||||| |||||||     
T  46728801 atgactttgaagtcgtcaacgttgcaaattcggagacatgggtattccagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttata 46728702  T
Q  201 ctattaacattgatg 215  Q
     ||||||||| ||||    
T  46728701 ttattaacatggatg 46728687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 38434736 - 38434945
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||   |||| || ||||||    
T  38434736 cgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattactagatca-gcttcgatccag---tgcagataaaatca 38434831  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||  || ||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||   |||||||    
T  38434832 atgactttggagtcgtcaacgttgcagatccgg-gacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgtcattttatg 38434930  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  38434931 ctattaacatggatg 38434945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 16992009 - 16992220
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||  |||  |||||||| ||||||||| ||||||||||||   ||| |||||||||    
T  16992009 cgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagattatcagatcag-cttcgatccagt---gcatatcaaatca 16992104  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||| |||||| |||  || ||||  |||||||| |||||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  16992105 atgactttgaagtcgtaaacattgcagatccggagacatgggtattccagagacttaaatattgtcatatgtgtaggctttaatactttgctgttttatg 16992204  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  16992205 ctattaacatggatgt 16992220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 29589337 - 29589128
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||  ||||||||||||   ||| ||||| ||||    
T  29589337 gtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagattgtttgatcaa-cttcgatccagt---gcagatcaactcaa 29589242  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    | ||||||||||| |||||| || ||||  ||||||||  |||||||||||||||||||||||||||||||||  |||||| |||||||  |||||||||    
T  29589241 tgactttggagtcttcaacgttgcagatccggagacatgagtattctggagacttaaatatagtcatatgtgtatgctttagtactttgtcgttttatgc 29589142  T
Q  202 tattaacattgatg 215  Q
    ||||||||| ||||    
T  29589141 tattaacatggatg 29589128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 51646231 - 51646444
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||  |||||||| |||||||| ||||||||||||   |||| ||||||||     
T  51646231 cgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgttcggttcagattatcagatca-gcttcgatccag---tgcagatcaaatcg 51646326  T
Q  101 ataactttggagtcgtcaacgat---gaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttt 197  Q
    || |||||||| ||||||||| |   | ||||  | |||||| |||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  51646327 atgactttggaatcgtcaacgttgcagcagatccgaagacatgggtattccagagacttaaatatagtcatatgtgtaggctttaatactttgccgtttt 51646426  T
Q  198 atgctattaacattgatg 215  Q
    ||||||||||||| ||||    
T  51646427 atgctattaacatggatg 51646444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 43156916 - 43157125
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaa-atcaaatcaat 102  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||| ||||||| ||||   |||| |||||||||||    
T  43156916 ctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagattgttagatcag-cttcgattcagt---gcaagatcaaatcaat 43157011  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||||||| |||||| || ||||  ||| ||||  ||||||   |||||||||||||||||||||||| ||||||| |||||||  ||||||||||    
T  43157012 gactttggagtcctcaacgttgcagatccggacacatgagtattccatagacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgct 43157111  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  43157112 attaacatggatgt 43157125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 26576479 - 26576269
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||   ||| |||||||||    
T  26576479 cgtcgttgtgcgac-ttgtttgtctttcctgtttcgttcaggtatttgttcgattcagattgtcaaatcag-cttcgatctagt---gcagatcaaatca 26576385  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||||||||||||| ||||  | ||||||  |||||| ||||||| |||||||||||||||||| ||||||| |||||| | || |||||    
T  26576384 atgactttggagtcgtcaacgatgcagatccgaagacatgagtattccggagactcaaatatagtcatatgtgtaggctttagtactttaccgtattatg 26576285  T
Q  201 ctattaacattgatgt 216  Q
     ||||| ||| |||||    
T  26576284 ttattatcatggatgt 26576269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 23067825 - 23067614
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  23067825 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 23067730  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||| |||||||| | ||||| ||| | |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  23067729 atgactttggcgtcatccacgttgcagattcggagacatggctattccggatatttaaatatagtcatatgtgtaggcctttgtaccttgccgttttatg 23067630  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  23067629 ctattaacatggatgt 23067614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 210
Target Start/End: Complemental strand, 1657521 - 1657338
Alignment:
Q  23 tctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacga 122  Q
    |||| ||||||| ||| |||||||||||| |||||||| ||||||| || ||||||||||||   ||||||||||||||| ||||||||||||||||||     
T  1657521 tcttccttgttttgtttaggtatttgttcgattcagatagtcagattag-cttcgatccagt---gcaaatcaaatcaatgactttggagtcgtcaacgt 1657426  T
Q  123 tgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    || ||||  |||||||| |||||||  ||||||||||||||||||||||||| || || | || ||||| ||||||||||||||||||    
T  1657425 tgcagatccggagacatgggtattccagagacttaaatatagtcatatgtgtaggattcagtattttgccgttttatgctattaacat 1657338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 46716871 - 46716660
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  46716871 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 46716776  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||||| || | ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  46716775 atgactttggcgtcatccacgttgcagatccggagatatggctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 46716676  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  46716675 ctattaacatggatgt 46716660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 6408580 - 6408793
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||| ||||||| |||| ||||||| ||||| |||||||| ||   || | |||||||||    
T  6408580 cgtctttgtgcgacattgtttgtcttacttgtttcgtttaggtaattgttcagttcaaattgtcaaatcag-cttcgatctagg--tgtagatcaaatca 6408676  T
Q  101 ataactttgg-agtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    || | ||||| ||| ||||||| |  || | |||| |||| ||||||| |||||||||||||||||||| ||||| ||||||  ||||||||||||||||    
T  6408677 atgagtttgggagttgtcaacgtttcaggtctggaaacatgggtattccggagacttaaatatagtcatctgtgtaggctttggtactttgctgttttat 6408776  T
Q  200 gctattaacattgatgt 216  Q
    |||||||| || |||||    
T  6408777 gctattaaaatggatgt 6408793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1125078 - 1125272
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||   |||| |||||||||||| ||||||||||||   |||| |||||||||    
T  1125078 cgtctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcagatca-gcttcgatccag---tgcagatcaaatca 1125173  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    || | |||| ||||||||||| |||||||   |||||||   | ||| | ||||||| ||||||||||||||||  ||||||||||||||  |||||||    
T  1125174 atgattttgaagtcgtcaacgttgaagatccagagacatgaatgttccgtagacttacatatagtcatatgtgtatgctttaatactttgtcgttttat 1125272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 4634420 - 4634630
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  4634420 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 4634515  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||| | |||||||||||||||||||| |||  |  |||||||  ||||||||    
T  4634516 atgactttggtgtcatccacgttgcagatccggatacatggttattccggatatttaaatatagtcatatgtgtaggcaattgtactttgtcgttttatg 4634615  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  4634616 ctattaacatggatg 4634630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 9661990 - 9662200
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| |||||||||| |||||| ||||||||||||   |||| ||  |||||    
T  9661990 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatca-gcttcgatccag---tgcagatgcaatca 9662085  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||||||||| |||||||||||||||||||| | |  |  |||||||| ||||||||    
T  9662086 atgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagtcatatgtgtagacaattgtactttgccgttttatg 9662185  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  9662186 ctattaacatggatg 9662200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 14542489 - 14542279
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||   ||| ||| |||||    
T  14542489 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcag-cttcgatccagt---gcagatccaatca 14542394  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||  || ||||  ||| |||| | ||||| ||||| |||||||||||||||| ||| |||  |  |||||||| ||||||||    
T  14542393 atgactttgttgtcatccactttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtaggcaattgtactttgccgttttatg 14542294  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  14542293 ctattaacatggatg 14542279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 30470100 - 30469890
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||| |||| ||  ||||||||||||||||| |||||||||   || |||| ||| |||||    
T  30470100 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcagatca-gcttcgatc---tagtgcagatccaatca 30470005  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||| | ||||||||    
T  30470004 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtacttttccgttttatg 30469905  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  30469904 ctattaacatggatg 30469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 4959546 - 4959340
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||  |||  | ||||||||||| ||| |||    || |||| ||| ||||||| |    
T  4959546 tttgtgcgacgttgtttgtctttcttgtttcgttcctgtatttgttcggttcgaaatgtcagatcag-cttagat----tagtgcagatccaatcaatga 4959452  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    |||||| ||||||| || || ||||  |||||||| ||||||| | |||||| |||||||||||  |||| | ||||  |||||||| ||||||||||||    
T  4959451 ctttggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatatagtcatgggtgtagacttttgtactttgcagttttatgctat 4959352  T
Q  205 taacattgatgt 216  Q
    ||||||||||||    
T  4959351 taacattgatgt 4959340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 46775830 - 46775624
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||| |||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||| |||||||||   || |||| ||| ||||||| |    
T  46775830 tttgtgcggcgttgtttgtcttttttgcttcgttcatgtatttgttcgattcagattgtcagatca-gcttcgatc---tagtgcagatccaatcaatga 46775735  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
     ||||  ||| |||||| || ||||  ||| ||||| |||||| |||||||| |||||| |||||||||| ||||||  | |||||  ||||||||||||    
T  46775734 atttgacgtcatcaacgttgcagatacggatacata-gtattccggagacttgaatataatcatatgtgtaggcttttgtgctttgtcgttttatgctat 46775636  T
Q  205 taacattgatgt 216  Q
    |||||| |||||    
T  46775635 taacatagatgt 46775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6789853 - 6789643
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||  ||| ||| ||| |||||    
T  6789853 cgtctttgtgcgccattgtttgtctttcttgtttcgttaaggtatttgttcaattcagaatgtcagatca-gcttcgatcc--tac-gcagatccaatca 6789758  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||  || || | | || ||||| | ||||||   |||| | ||||||| |||||||| |||||||| || ||| | |||||| |||||||||    
T  6789757 atgactttggcatcatccatgttgcagattagaagacatttatattatagagactttaatatagtgatatgtgtaggttttga-actttgttgttttatg 6789659  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  6789658 ctattaacatggatgt 6789643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 28990436 - 28990646
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||||||||  ||||| |||||||||||||||||||||| ||||||||  ||||||||||||||| | |||||||||   || |||| ||| ||||||    
T  28990436 gtctttgtgcggtgttgtctgtctttcttgtttcgttcaggcatttgttccgttcagattgtcagatta-gcttcgatc---tagtgcatatccaatcaa 28990531  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    | | ||||  |||||| ||| || |||| || ||||||  ||||||||||||||| |||||  |||||||||  | ||||  ||||||| ||||||||||    
T  28990532 tgattttgacgtcgtccacgttgcagatctgaagacatgtgtattctggagactttaatattatcatatgtgcagacttttgtactttgttgttttatgc 28990631  T
Q  202 tattaacattgatgt 216  Q
    ||||||||| |||||    
T  28990632 tattaacatggatgt 28990646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 37869393 - 37869183
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||||||||||||| ||| | |||||||||||  | ||||||||| ||| |||||||||||||||||| ||||||||||||   ||||||| ||||||    
T  37869393 gtctttgtgcgacgttatttatttttcttgtttctctaaggtatttgatcagttcagattgtcagatcag-cttcgatccagt---gcaaatccaatcaa 37869298  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    | ||||||| ||| || ||| || ||||  | |||||| | ||| | ||||| |||||||||||||||||||| ||| ||  |||||||  ||||||||     
T  37869297 tgactttggcgtcatccacgttgcagatccgaagacatggttatcccggagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatgt 37869198  T
Q  202 tattaacattgatgt 216  Q
    ||||||||| |||||    
T  37869197 tattaacatggatgt 37869183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 29577099 - 29576899
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatc- 99  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||||||| ||| ||||| |||||||    ||| ||| ||||     
T  29577099 cgtctttgtgcggcgttgtttgtcttttttgtttcgttcaggtatttgttcggttcagattgtcatatc-ggcttagatccag---cgcatatccaatca 29577004  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    ||| | ||||| |||||||||| || ||||  | ||||||   ||||| |||||||| ||||||||||||||||| ||||||  ||| |||| |||||||    
T  29577003 aatgattttggcgtcgtcaacgttgcagatccgaagacatgaatattccggagacttgaatatagtcatatgtgtaggcttttgtaccttgccgttttat 29576904  T
Q  200 gctat 204  Q
     ||||    
T  29576903 actat 29576899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 54420718 - 54420506
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||| ||  |||||||||||||||||   |||||||   || |||| ||  |||||    
T  54420718 cgtctttgtgcgacgttgtttgtttttcttgtttctctgaggtatttgatcgcttcagattgtcagatcaactttcgatc---tagtgcagattcaatca 54420622  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  ||| |||| | ||||| ||||| ||||||||||||||||||||  || ||  ||||||| |||||||||    
T  54420621 atgactttgacgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtaagcatttgtactttgatgttttatg 54420522  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  54420521 ctattaacatggatgt 54420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 40859811 - 40859893
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||||| |||||||||||||    
T  40859811 cgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatca-gcttcgatccagt 40859893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 52555714 - 52555506
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaata 103  Q
    |||||| |||||||||||||||||||||||||  | ||||||||  ||  |||||||||||| |||| ||||||||||||   |||| ||| |||||||     
T  52555714 ctttgtacgacgttgtttgtctttcttgtttctcttaggtatttaatcggttcagattgtcaaatca-gcttcgatccag---tgcagatccaatcaatg 52555619  T
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||||||| ||| || | | || ||||| ||||||||   ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||   ||||||||||    
T  52555618 actttggcgtcatccatgttgcagattcggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgtacttttatgcta 52555519  T
Q  204 ttaacattgatgt 216  Q
    ||||||| |||||    
T  52555518 ttaacatggatgt 52555506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 32189117 - 32189327
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||| |||| |   ||||||||||||||||| ||||||| ||||   |||| ||| |||||    
T  32189117 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgattggttcagattgtcagatca-gcttcga-ccag---tgcagatccaatca 32189211  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || |||| ||||||| |   || || ||||| ||||||||| |||||||||| ||| ||  |||||||| ||||||||    
T  32189212 atgactttggcgtcatccacgttgcagatctggagacgtgtttactccggagatttaaatataatcatatgtgtaggcatttgtactttgccgttttatg 32189311  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  32189312 atattaacatggatgt 32189327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 41486712 - 41486922
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| ||||||||||| |||||||||||  |||| |||||| ||  |||||||||||| || | |||||||| |||   |||||||| |||||    
T  41486712 cgtctttgtgcaacgttgtttgtttttcttgtttctctcagctatttgatcggttcagattgtcaaatta-gcttcgatacag---tgcaaatccaatca 41486807  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || |||| ||||||||| | ||||| |||||  ||||| ||||||||||||| ||| ||  ||||||| |  ||||||    
T  41486808 atgactttggcgtcatccacgttgcagatctggagacatggttattccggagatctaaatctagtcatatgtgtaggcatttgtactttg-tcgtttatg 41486906  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  41486907 ctattaacatggatgt 41486922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 216
Target Start/End: Complemental strand, 34115594 - 34115422
Alignment:
Q  40 aggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacat 139  Q
    ||||||||| ||  |||||||||||||||||| |||| |||||||   | | ||| ||||||| | ||||| ||| |||||| || ||||  ||||||||    
T  34115594 aggtatttgatcggttcagattgtcagatcag-cttcaatccagt---gtagatccaatcaatgattttggcgtcatcaacgttgcagatccggagacat 34115499  T
Q  140 aggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
     | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| |||||||||||||||||| |||||    
T  34115498 ggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgt 34115422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33020902 - 33020692
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| ||||||||||||||    ||  ||| |||| | ||||| |||||||||||||||||||  |||||||||||   ||||||| || ||    
T  33020902 cgtctttgtgcggcgttgtttgtcttttccctt--gttgaggtgtctgttcgattcagattgtcagatcagt-ttcgatccagt---gcaaatccaacca 33020809  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |||||| || ||||| ||||||||   ||||| ||||| || ||||||||||||| ||| |||||   |||||||   |||||||    
T  33020808 atgactttggcgtcatcaacgttgtagattcggagacatgattattccggagattttaatatagtcatatttgtaggcttatgtactttgtcattttatg 33020709  T
Q  201 ctattaacattgatgtc 217  Q
    |||||||||| ||||||    
T  33020708 ctattaacatggatgtc 33020692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 42972175 - 42972380
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||| ||||||||| ||| |||||||||||||  ||||||||||| ||  |||||||||||||||||  ||||||||||||   ||| ||| |||||    
T  42972175 cgtctttatgcgacgttatttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcaa-cttcgatccagt---gcagatccaatca 42972270  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  ||||||||   |||||   ||| |||||||||||||||||||| ||| ||  ||| |||| ||||| ||    
T  42972271 atgactttgacgtcatccacgttgcagatccggagacatgactattccaaagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttgtg 42972370  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  42972371 ctattaacat 42972380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 50003153 - 50002948
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||| | | | | ||||||||||||||| ||||||||||||   |||||||  |||||    
T  50003153 cgtctttgtgcgacgatgtttgtctttcttgtttctctcaggtattagattagtccagattgtcagatca-gcttcgatccag---tgcaaattcaatca 50003058  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |  ||||||| ||  |||||| |  |||||  ||||||| | ||||| | ||| |||||||||||||||  ||| ||| ||   ||||||| ||||||||    
T  50003057 acgactttggcgttatcaacgttacagattcagagacatggttattccgaagatttaaatatagtcatagttgtaggcatttgcactttgccgttttatg 50002958  T
Q  201 ctattaacat 210  Q
     |||||||||    
T  50002957 ttattaacat 50002948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 3169564 - 3169645
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||  |||| |||||||||||| ||||| |||||||    
T  3169564 gtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgttcggttcaaattgtcagatca-gcttcaatccagt 3169645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30416570 - 30416454
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||| |||||||||||| ||||| |||||| |||  |||||||||||  ||||||||||||||||| |||| |||||||   |||| |||||||||    
T  30416570 cgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagattgtcagatca-gctttgatccag---tgcagatcaaatca 30416475  T
Q  101 ataactttggagtcgtcaacg 121  Q
    || ||||||||||| ||||||    
T  30416474 atgactttggagtcatcaacg 30416454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 53903718 - 53903926
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| || ||||||||||||| |||| ||||||  ||||||||||| ||  ||||||||| ||||||| ||||||||||||   |||| ||| |||||    
T  53903718 cgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgccagatca-gcttcgatccag---tgcagatccaatca 53903813  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| |  |||| |||| ||||   ||||| ||| | |||||||||||||||||||| ||| ||  |||||||  |||||||     
T  53903814 atgactttggcgtcatccacgttacagatctggaaacat--ttattccggatatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatt 53903911  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  53903912 ctattaacatggatg 53903926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 26742347 - 26742231
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| |||||||||||||||||| || |||| |||| |||| |||||| ||||||| | ||||||||||||| ||| ||| |  ||| ||||| ||||||    
T  26742347 caatgactttggagtcgtcaacgttgcagatctggacacatgggtattttggagacatgaatatagtcatatttgtaggcatatatattttgccgtttta 26742248  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  26742247 tgctattaacatggatg 26742231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7242746 - 7242680
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcaga 67  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  7242746 cgtctttgtgcgaagttgtttgtctttcttatttcgttcaagtatttgttcggttcagattgtcaga 7242680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 1645531 - 1645462
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||   |||| |||||||||||||    
T  1645531 gtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgtttggttcaaattgtcagatcag 1645462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 7083696 - 7083579
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || |||| |||||||||  |||||| |||||| ||||||||||||||| | | ||| |   |||||||| ||||||    
T  7083696 caatgactttggtgtcgtcaacgttgcagatctggagacatgagtattccggagacataaatatagtcatatttataggcataggtactttgccgtttta 7083597  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  7083596 tgctattaacatggatgt 7083579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 9474516 - 9474313
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||| |   ||||||||||| |||||  |||||||||||   || | ||| |||||    
T  9474516 cgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgattggttcagattgtctgatca-acttcgatccag---tgtagatccaatca 9474421  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||  || ||||   ||||||| | ||||| ||| | |||||||||||||||||||| ||| ||  ||||||||  |||||||    
T  9474420 atgactttgacgtcatccacattgcagatcctgagacatggttattccggatatttaaatatagtcatatgtgtaggcatttgtactttgccattttatg 9474321  T
Q  201 ctattaac 208  Q
    ||||||||    
T  9474320 ctattaac 9474313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 5814575 - 5814694
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||||| ||| |||||| || ||||   |||||||  ||||||||||||||| ||||||||||||| ||| ||| | |||||||| |  |||    
T  5814575 atcaatgactttggcgtcatcaacgttgcagatccagagacatgagtattctggagacttgaatatagtcatatttgtaggcataaatacttttccattt 5814674  T
Q  197 tatgctattaacattgatgt 216  Q
    |||||||||||||| |||||    
T  5814675 tatgctattaacatggatgt 5814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 38170126 - 38169926
Alignment:
Q  11 cgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttgg 110  Q
    |||||||||||||||||||||||| |||||||||||| |||  |||||||||||| ||||  ||| |||| ||| |||   ||| ||||||| |||||||    
T  38170126 cgacgttgtttgtctttcttgttt-gttcaggtatttattccgttcagattgtcatatca-actttgatctagtgctg---atccaatcaatgactttgg 38170032  T
Q  111 agtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggc-tttaatactttgctgttttatgctattaaca 209  Q
     ||| |||||| || | ||   ||  |||  |||||| |||||||| |||||||||||| |||| ||| |||  ||||||| | ||||||||||||||||    
T  38170031 cgtcatcaacgttgcaaatcctgatgcatgagtattccggagacttgaatatagtcatacgtgtaggctttttctactttgttattttatgctattaaca 38169932  T
Q  210 ttgatg 215  Q
    | ||||    
T  38169931 tggatg 38169926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 31601335 - 31601122
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtat--ttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaat 98  Q
    |||||||||||||| |||||| |||||||||||||  ||||||||  ||| |   |||||||||||||||||  |||||||||||   |||| ||| |||    
T  31601335 cgtctttgtgcgacattgtttatctttcttgtttctctcaggtatatttgattggttcagattgtcagatca-acttcgatccag---tgcagatccaat 31601240  T
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||  ||| || ||| || |||    ||||||| | ||||  ||||| ||||||||||| |||||||| ||| ||  ||| |||| | ||||    
T  31601239 caatgactttgacgtcatccacgttgcagacccagagacatggttatttcggagatttaaatatagttatatgtgtaggcatttgtaccttgccgcttta 31601140  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  31601139 tgctattaacatggatgt 31601122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 6082300 - 6082197
Alignment:
Q  113 tcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattg 212  Q
    ||||||||| || ||||  ||| ||||  ||||||||||||||| ||||||||||||| ||| ||| |   |||||||| |||||||||||||||||| |    
T  6082300 tcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacatgg 6082201  T
Q  213 atgt 216  Q
    ||||    
T  6082200 atgt 6082197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 20961611 - 20961796
Alignment:
Q  27 tcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaa 126  Q
    |||||||||  ||||||||||| ||  |||||||||||||||||  ||||||||||||   ||| ||  ||||||| ||||||  ||| || ||| || |    
T  20961611 tcttgtttctctcaggtatttgatcgcttcagattgtcagatcaa-cttcgatccagt---gcagattcaatcaatgactttgacgtcatccacgttgca 20961706  T
Q  127 gatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||  ||| ||||   ||||| ||||| ||||||||| |||||||||| ||| ||  |||||||| ||||||||||| |||||| |||||    
T  20961707 gatacggaaacatgattattccggagatttaaatatattcatatgtgtaggcatttgtactttgccgttttatgctaataacatggatgt 20961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 40861219 - 40861285
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    ||||||||||||||||||| ||||||  |||||| |||||||  |||||||||||||||||| ||||    
T  40861219 ggagacttaaatatagtcagatgtgtaagctttagtactttgtcgttttatgctattaacatggatg 40861285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 626434 - 626317
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||| ||  || |||| || ||||||  |||||| |||||| ||||||||||||||| ||| ||| |   |||||||| ||||||    
T  626434 caatgactttggtgtcgtcgacattgcagatctgaagacatgagtattccggagacataaatatagtcatatttgtaggcatgggtactttgccgtttta 626335  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  626334 tgctattaacatggatgt 626317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12519797 - 12519862
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||   |||| ||||||||||||    
T  12519797 tttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatca 12519862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 12716963 - 12716890
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||| ||||||| ||||||||||||||||| ||| | ||||||||| |||||||| ||||||| || |||||    
T  12716963 tattctagagactttaatatagtcatatgtgtaggcataaatactttgttgttttatactattaatatggatgt 12716890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 23002759 - 23002698
Alignment:
Q  155 ttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||||||||||||||| ||| ||  |||||||| |||||||||||||||||| |||||    
T  23002759 ttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgt 23002698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 46386747 - 46386600
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||| | |||||||| |||||||||||||| ||||||||||||  |||| ||||||| ||||  |||||||| ||| |||   ||| ||||||| |    
T  46386747 tttgtgcgtcattgtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtcatatca-acttcgatctagtgctg---atccaatcaatga 46386652  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagactt 156  Q
    |||||| || ||||||| || ||||   || ||||| ||||||| |||||||    
T  46386651 ctttggcgttgtcaacgttgcagatccagatacataagtattctagagactt 46386600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 9549714 - 9549786
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    ||||||||||| |||||||||||||||||| | | | ||  |||||||| |||||||||||||||||| ||||    
T  9549714 tattctggagatttaaatatagtcatatgtatagacatttgtactttgccgttttatgctattaacatggatg 9549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 38944032 - 38943916
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| || ||||||| || ||||  |||||||   |||||| |||||| | ||||||||||||| ||| ||| | |||||||||  ||||||    
T  38944032 caatgactttggcgttgtcaacgttgcagatccggagacacgagtattccggagacatgaatatagtcatatttgtaggcataaatactttgtcgtttta 38943933  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  38943932 tgctattaacatggatg 38943916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 2945289 - 2945434
Alignment:
Q  16 ttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcg 115  Q
    ||||| || ||| |||||||||||||||||||||||  |||||||||||||||||   ||||||||||   || | |   ||||||| ||||||| ||||    
T  2945289 ttgttagtgttttttgtttcgttcaggtatttgttcggttcagattgtcagatca-atttcgatccag---tgaagacacaatcaatgactttggcgtcg 2945384  T
Q  116 tcaacgatgaagatttggagacataggtattctggagacttaaatatagt 165  Q
    | |||  || ||||  |||||||||||||||  |||||||| ||||||||    
T  2945385 ttaacattgcagatccggagacataggtatttcggagacttgaatatagt 2945434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 29257406 - 29257527
Alignment:
Q  45 tttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggta 144  Q
    |||||||| |||||||||||||||||  ||| ||| |||||   |||||| ||||||| ||||||| |||||||||| || ||||  ||||||||  |||    
T  29257406 tttgttcagttcagattgtcagatca-actttgatacagta---caaatccaatcaatgactttggtgtcgtcaacgttgcagatacggagacatgtgta 29257501  T
Q  145 ttctggagacttaaatatagtcatat 170  Q
    ||| | | |||| |||||||||||||    
T  29257502 ttccgaatacttgaatatagtcatat 29257527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 9781780 - 9781704
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccag 83  Q
    |||||| | |||||||||||||| |||||| ||||||||||||||||  |||||||||||| || | ||||||||||||    
T  9781780 tttgtgggtcgttgtttgtcttt-ttgttttgttcaggtatttgttcggttcagattgtcatatta-gcttcgatccag 9781704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35658507 - 35658438
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||||||||||||||||||  | ||| |||| ||| |||||||| || |||||||||||||||    
T  35658507 cgtctttgtgcgacgttgtttgtcttttctcttttgttc-ggtgtttgttcagtttagattgtcagatcag 35658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 4622551 - 4622470
Alignment:
Q  134 agacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    |||||| |||||||  ||||||| ||||||||||| ||||| ||| ||  |||||||  |||||||||||||||||| ||||    
T  4622551 agacatgggtattccagagactttaatatagtcatgtgtgtaggcgttcgtactttgtcgttttatgctattaacatggatg 4622470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 22757331 - 22757448
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || | ||  ||||||||  |||||| |||||| | ||||||||||||| ||| ||| |   ||||| || ||||||    
T  22757331 caatgactttggcgtcgtcaacgttgcaaatccggagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtacttagccgtttta 22757430  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  22757431 tgctattaacatggatgt 22757448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 26674609 - 26674726
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  | ||||||  |||||  |||||| |||||| |||||||| ||| ||| |   |||||| ||||||||    
T  26674609 caatgactttggcgtcgtcaacgttgcagatccgaagacatgagtatttcggagacataaatacagtcatatttgtaggcataggtacttttctgtttta 26674708  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  26674709 tgctattaacatggatgt 26674726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4622686 - 4622622
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtca 65  Q
    |||||||||| | || |||||||||||||||||| | ||||||||| ||||  ||||||||||||    
T  4622686 cgtctttgtgtggcgctgtttgtctttcttgttttgctcaggtattggttcggttcagattgtca 4622622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 6882193 - 6882300
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||||||||||  |||||||||| || ||||  ||||||||  ||||    ||||||| ||||||||||||| ||| | | | |||||||||| ||||||    
T  6882193 caataactttgtcgtcgtcaacgttgcagatccggagacatgagtataacagagacttgaatatagtcatatttgtagacataaatactttgccgtttta 6882292  T
Q  199 tgctatta 206  Q
    ||||||||    
T  6882293 tgctatta 6882300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 30202275 - 30202346
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| ||||||| |||||||||| || ||||  ||||||||   |||||||||||||| |||||||||||||    
T  30202275 caatgactttggcgtcgtcaacgttgcagatccggagacatgattattctggagacttgaatatagtcatat 30202346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 31311732 - 31311818
Alignment:
Q  132 ggagacataggtattctggagacttaaatata--gtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||| |||||  |||||||| ||||||  ||||| ||||| ||||||  |||||||  |||||||||||||||||| |||||    
T  31311732 ggagacatatgtatttcggagacttgaatatatagtcatgtgtgtaggcttttgtactttgtcgttttatgctattaacatggatgt 31311818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 3673778 - 3673836
Alignment:
Q  158 aatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||||||| ||| |||||   |||||||| |||||||||||||||||| |||||    
T  3673778 aatatagtcatatttgtaggcttgtgtactttgccgttttatgctattaacatggatgt 3673836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 27090997 - 27091071
Alignment:
Q  142 gtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||||||||||||| ||||||| || |||  || |  ||||||||  |||||||||||||||||| |||||    
T  27090997 gtattctggagacttaaacatagtcacatttgtaagcatagatactttgtcgttttatgctattaacatagatgt 27091071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 55600367 - 55600305
Alignment:
Q  153 acttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    |||| |||||| |||||| ||| ||| | |||||||||| |||||||||||||||||| ||||    
T  55600367 acttgaatataatcatatttgtaggcataaatactttgccgttttatgctattaacatggatg 55600305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 3159258 - 3159319
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| || |||||||||| ||| ||| | | ||||||||||||| |||||||||||||    
T  3159258 ggagacttgaacatagtcatatttgtaggcataagtactttgctgtttcatgctattaacat 3159319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 23926316 - 23926389
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| ||||| || ||||||||||||| ||| |||||   |||||||| |||| ||||||||||||| |||||    
T  23926316 tattccggagattttaatatagtcatatttgtaggcttatgtactttgccgtttgatgctattaacatagatgt 23926389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 51152361 - 51152478
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| |||||||  ||||||||| || ||||  ||||| ||  |||||| |||||| | ||||||||||||| ||| |||     |||||||| ||||||    
T  51152361 caatgactttggcatcgtcaacgttgcagatccggagatatgagtattccggagacatgaatatagtcatatttgtaggcaaatgtactttgccgtttta 51152460  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  51152461 tgctattaacatggatgt 51152478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 35338533 - 35338581
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttc 51  Q
    |||||||||| ||||  ||||||||||||||| |||||| |||||||||    
T  35338533 tctttgtgcggcgttacttgtctttcttgttttgttcagatatttgttc 35338581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28015494 - 28015705
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||   ||| |||||||||    
T  28015494 cgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgttagatcag-cttcgatccagt---gcagatcaaatca 28015589  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||  || ||||  ||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||||| ||||||||    
T  28015590 atgactttggagtcgtcaacattgcagatccggagacataggtattctggaggcttaaatatattcatatgtgtaggctttagtactttgccgttttatg 28015689  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  28015690 ctattaacatggatgt 28015705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 38649334 - 38649124
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||| || |||||||| ||||||| ||||||||||    |||| |||||||||    
T  38649334 cgtctttgtgcgacgttgtttgcctttcttttttcgttcaagtatttgttcgat-cagattgttagatcag-cttcgatcca----tgcatatcaaatca 38649241  T
Q  101 ataactttggagtcgtcaacgatgaagatttgga-gacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    || |||||||||||||||||  || |||| |||| ||||| ||||||| ||||||||||||||||||||||||||  |||||| |||||||| ||||| |    
T  38649240 atgactttggagtcgtcaacattgtagatctggaagacatgggtattccggagacttaaatatagtcatatgtgtaagctttagtactttgccgtttttt 38649141  T
Q  200 gctattaacattgatgt 216  Q
    ||||||||||| |||||    
T  38649140 gctattaacatggatgt 38649124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5025033 - 5024822
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||  ||||||| |||| || ||||||||||||  ||||||||||||||||||  ||||||||||| | |   |||||||||    
T  5025033 cgtctttgtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagattgtcagatcaga-ttcgatccagtccag---atcaaatca 5024938  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||| | || ||||  |||||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||  |||| |||    
T  5024937 atgactttggagtcgtcaatgttgcagatccggagacataggtattctggagacttaaatatagtcaaatgtgtaggctttagtattttgtcgtttcatg 5024838  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  5024837 ctattaacatggatgt 5024822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 210
Target Start/End: Original strand, 39090227 - 39090430
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| ||||||||||||   |||||||||| |||||    
T  39090227 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatca-gcttcgatccag---tgcaaatcaattcaat 39090322  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||||||| |||| | || |||||  |||||||  |||||   | ||||||||||||||||||||||| ||||||| ||||||||  ||||||| |    
T  39090323 gactttggagtcatcaatgttgcagattcagagacatgagtattacagtgacttaaatatagtcatatgtgtaggctttagtactttgccattttatgat 39090422  T
Q  203 attaacat 210  Q
    ||||||||    
T  39090423 attaacat 39090430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 41748504 - 41748294
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||  ||||||| |||||||||  |||||||| | |   ||| |||||||||    
T  41748504 cgtcttagtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagatcgtcagatcaa-cttcgatcaaat---gcagatcaaatca 41748409  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||   | |||| ||||||||  ||||||| ||||||||||||||||| |||||||| || |||| |||||||| ||||||||    
T  41748408 atgactttggagtcatcaacatcgcagatctggagacaagggtattccggagacttaaatatagttatatgtgtaggttttagtactttgccgttttatg 41748309  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  41748308 ctattaacatggatg 41748294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 26017635 - 26017424
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  |||||||||||| |||| ||||||||||||   |||| ||| |||||    
T  26017635 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcatatca-gcttcgatccag---tgcagatccaatca 26017540  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |  ||| || | ||| |||||||| | ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  26017539 atgactttggcgtcattcacgttgcaaattcggagacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 26017440  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  26017439 ctattaacatggatgt 26017424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 772580 - 772785
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||   || |||| ||| |||||    
T  772580 cgtctttgtgcgatattgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatca-gcttcaatc---tagtgcagatccaatca 772675  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| |||||||||  |||||||   |||||||  |||||  ||||| | ||| |||||||||||||| ||||||  |||||||  |||||||     
T  772676 atgactttggcgtcgtcaacattgaagatccagagacatgagtatttcggagaatgaaaaatagtcatatgtgtaggcttttgtactttgtcgttttata 772775  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  772776 ctattaacat 772785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 43483737 - 43483935
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| |||| |            |||||||||||| ||||| | ||||||||||   ||| |||||||||    
T  43483737 cgtctttgtgcgacgttgtttgtctttcttgttttgttcgg------------ttcagattgtcaaatcag-catcgatccagt---gcatatcaaatca 43483820  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||| ||||| |||||| || ||||  ||||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||  ||||||||    
T  43483821 atgacttttgagtcatcaacgttgcagatccggagacaaaggtattccggagacataaatatagtcatatgtgtaggctttaatactttgtcgttttatg 43483920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 34893263 - 34893449
Alignment:
Q  16 ttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcg 115  Q
    ||||||||||||||||||||||  |||||||||||  |||||| |||||||||||| ||| ||||||||   ||| ||||||| ||| |||||||||||     
T  34893263 ttgtttgtctttcttgtttcgt--aggtatttgtttcattcagtttgtcagatcag-ctttgatccagt---gcagatcaaattaatgactttggagtcc 34893356  T
Q  116 tcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||| || | ||  |||||| ||  ||||||| || ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  34893357 tcaacgttgcaaatccggagacgta--tattctgcaggcttaaatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacat 34893449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 8611601 - 8611390
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||| |||| ||  |||||||||||| ||||| ||||||||||||   ||| ||| |||||    
T  8611601 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcatatcag-cttcgatccagt---gcagatccaatca 8611506  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |||||||||| ||| || ||| || ||||  ||| |||| | |||||  |||| |||||||||||||||||||| ||  ||  |||||||| ||||||||    
T  8611505 ataactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggtatttgtactttgccgttttatg 8611406  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  8611405 ctattaacatggatgt 8611390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 40775404 - 40775615
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| |||||||||   || |||| ||| |||||    
T  40775404 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatc---tagtgcagatccaatca 40775499  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||   ||||||| | ||||| ||||| |||||||||||||||||||| | |  |  |||||||| ||||||||    
T  40775500 atgactttggcgtcatccacgttgcagatccagagacatggttattccggagatttaaatatagtcatatgtgtagacaattgtactttgccgttttatg 40775599  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  40775600 ctattaacatggatgt 40775615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 49167062 - 49167272
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||   |||||||||| ||  |||||||||| ||||||| ||||||||||||   ||| ||| |||||    
T  49167062 cgtctttgtgcgacgttgtttgtttttcttgtttctcccaggtatttgatcgcttcagattgttagatcag-cttcgatccagt---gcagatctaatca 49167157  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||| | ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  49167158 atgactttagcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 49167257  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  49167258 ctattaacatggatg 49167272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 47749871 - 47750082
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| | ||||||||||   |||| ||| ||||     
T  47749871 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gtttcgatccag---tgcagatccaatcg 47749966  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||| || | | || | | || |||| ||||||||| | ||||| | ||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  47749967 atgacttcggcggcatccatgttgcagatctggagacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 47750066  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  47750067 ctattaacatggatgt 47750082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 11001980 - 11002185
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| |||||||| |||   |||| ||| |||||    
T  11001980 cgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgattcag---tgcagatctaatca 11002075  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |  ||| || ||||  | | |||| | ||||| ||||| |||||||||||||||||||| ||| ||  ||||||||  |||||||    
T  11002076 atgactttggcgtcattcacgttgtagatccgaaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccattttatg 11002175  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  11002176 ctattaacat 11002185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9933984 - 9934114
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||||||   |||| |||||||||    
T  9933984 cgtctttgtgcgacgtt---tgtctttcttgtttcgttcaggtatttgtt-gattcagattgtcagatca-gctttgatccag---tgcagatcaaatca 9934075  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacat 139  Q
    || |||||||||||||||||| || ||||  ||||||||    
T  9934076 atgactttggagtcgtcaacgttgcagatccggagacat 9934114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 30992800 - 30992589
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||| ||  |||||||||||||||||  ||||||||   || |||| ||| |||||    
T  30992800 cgtctttgtgcgacgttgtttgtctttcttggttctctcaggtatttgatcggttcagattgtcagatca-acttcgatc---tagtgcagatccaatca 30992705  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||   || || ||| || ||||  |||| ||| | ||||| ||||| ||||||||||||||||||||  || ||  ||| |||| ||||||||    
T  30992704 atgactttgacatcatccacgttgcagatccggaggcatggctattccggagatttaaatatagtcatatgtgtatgcatttgtaccttgccgttttatg 30992605  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  30992604 ctattaacatagatgt 30992589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 36350305 - 36350515
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| ||| |||||||||||||||| |||||| |||||| ||||||||| | | ||||||||| ||||| ||| ||| |||| | |   ||| |||||    
T  36350305 cgtcttagtgtgacgttgtttgtcttttttgtttggttcagatatttgttcgacttagattgtcatatcag-ctttgattcagtgcgg---atccaatca 36350400  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    ||  |||||| |||||||||| || ||||| |||||||||| |||||||||||||| ||||| || |||||||| || |||  |||||||   |||||||    
T  36350401 atggctttggcgtcgtcaacgttgcagattcggagacatag-tattctggagacttgaatatggttatatgtgtaggtttttgtactttgtcattttatg 36350499  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  36350500 ctattaacatggatgt 36350515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 37399735 - 37399946
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| |  ||||| |||||| ||| | ||||||||||||   |||| ||| |||||    
T  37399735 cgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttgattgattcaaattgtccgatta-gcttcgatccag---tgcagatccaatca 37399830  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| |  | ||| |||||||| | |||||  |||| |||||||||||||||||||| | | ||  |||||||  ||||||||    
T  37399831 atgactttgacgtcatccacgttacaaattcggagacatggttattcatgagatttaaatatagtcatatgtgtagacatttgtactttgtcgttttatg 37399930  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  37399931 ctattaacatagatgt 37399946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 40476844 - 40477055
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||| ||||||||| ||   |||| ||| |||||    
T  40476844 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattgtcagatca-gcttcgatcaag---tgcagatccaatca 40476939  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  ||| | ||   ||||| ||||| ||||||||||| |||||||| | | ||  |||||||| ||||||||    
T  40476940 atgactttgacgtcatccacgttgtagatccggaaatatgattattccggagatttaaatatagtaatatgtgtagacatttgtactttgccgttttatg 40477039  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  40477040 ttattaacatggatgt 40477055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 23732368 - 23732159
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||| || |||||||||||||||||||||||||||||||| ||  |||||||||||| || | ||||||||||||   |||| ||| |||||||    
T  23732368 tctttgtgcgtcgctgtttgtctttcttgtttcgttcaggtatttggtcggttcagattgtcaaatta-gcttcgatccag---tgcagatccaatcaat 23732273  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| |||||| ||| || |||| |||||| |    ||||   || |||| |||||| ||||||||||  |||||  |||||||  ||||||||||    
T  23732272 gactttggcgtcgtccacgttgcagatctggagaaacgactatttcagatacttgaatataatcatatgtgtatgcttttgtactttgtcgttttatgct 23732173  T
Q  203 attaacattgatgt 216  Q
    ||||| ||||||||    
T  23732172 attaaaattgatgt 23732159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 46918537 - 46918741
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||||||||  ||||||||||||||||| |||| |||||   | |||||||  |||||    
T  46918537 cgtctttgtgcggtgttgtttgtcattcttgtttcgttcagg-atttgttcggttcagattgtcagatca-gcttagatcc---aatgcaaattcaatca 46918631  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||| | || ||  | | || ||||   |||||||  ||||| ||||||||| ||||||||||||||| | ||||||  |||||||| ||||||||    
T  46918632 atgactttagtgttgtgcatgttgcagatccagagacatgagtattttggagacttgaatatagtcatatgtataggcttttgtactttgccgttttatg 46918731  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  46918732 ctattaacat 46918741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 19895647 - 19895450
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtc 114  Q
    ||||||||| |||||||||||  ||||||||||| ||  |||||||||||| ||||| ||||||||||||   ||| ||  ||||||| ||||||| |||    
T  19895647 gttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcag-cttcgatccagt---gcagattcaatcaatgactttggcgtc 19895552  T
Q  115 gtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgat 214  Q
     || ||| || ||||| ||||||||   ||||||||||| ||||||||||||||||| || | |  |  |||| ||| |||||||||||||||||| |||    
T  19895551 atccacgttgtagattcggagacatgattattctggagatttaaatatagtcatatgggtagacaattgtactgtgccgttttatgctattaacatggat 19895452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 7986029 - 7986240
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||||| ||  |||||||||||| ||||| ||||||||||||   ||| ||| |||||    
T  7986029 cgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttgatccgttcagattgtcaaatcag-cttcgatccagt---gcagatccaatca 7986124  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  | | |||| | ||||| ||||| |||||||||||| || |||| | | ||  |||||||  ||||||||    
T  7986125 atgactttgacgtcatccacgttgcagatccgaatacatggttattccggagatttaaatatagtcctaagtgtagacatttgtactttgtcgttttatg 7986224  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  7986225 ctattaacatggatgt 7986240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 10250460 - 10250254
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| | |||||||||||||| || ||||||||||| ||||||||  |||||||||||||| || ||||||||| ||   |||| |||||||||    
T  10250460 cgtctttgtgtggcgttgtttgtcttttttatttcgttcaggaatttgttccgttcagattgtcagaaca-gcttcgatcgag---tgcagatcaaatca 10250365  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||| |  | ||||  | ||||||  ||||| ||||||||| |||||| |||||    | |||| ||||||||||  ||| ||||    
T  10250364 atgactttggagtcatcaatgtagtagatccgaagacatgtgtattttggagactt-aatatattcata----taggctataatactttgtcgttatatg 10250270  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  10250269 ctattaacatggatgt 10250254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13008650 - 13008579
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcagg 72  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  13008650 cgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttgttcggttcagattgtcatatcagg 13008579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24470530 - 24470612
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| |||||||||||||    
T  24470530 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgatccagt 24470612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24475478 - 24475560
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| |||||||||||||    
T  24475478 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgatccagt 24475560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 43807125 - 43806916
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||||||||||||||||||||||||||  |||||| |||| ||  |||||||||| |||||| |||||||||   || |||| ||| |||||||    
T  43807125 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtgtttgatcggttcagattgtaagatca-gcttcgatc---tagtgcagatccaatcaat 43807030  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| | | || ||| || ||||  ||||| || | ||||| ||| | ||||||||||||||||||||  || ||  ||  |||| ||||||| ||    
T  43807029 gactttggcggcatccacgttgcagatccggagatatggctattccggatatttaaatatagtcatatgtgtaagcatttgtatcttgccgttttatact 43806930  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  43806929 attaacatggatgt 43806916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 42490843 - 42491051
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaata 103  Q
    ||||||||||| |||||||| |||||||||||  ||||||||||| ||  |||||| |||||||||| |||||||||   || |||| ||| | |||||     
T  42490843 ctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagactgtcagatca-gcttcgatc---tagtgcagatccagtcaatg 42490938  T
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||| ||| ||| || ||| || ||||  |||||||  | ||||| ||| | ||||||||||| |||||||| | | ||  |||||||| |||||||||||    
T  42490939 actgtggcgtcatccacgttgcagatccggagacacggttattccggatatttaaatatagtaatatgtgtagacatttgtactttgccgttttatgcta 42491038  T
Q  204 ttaacattgatgt 216  Q
    ||||||| |||||    
T  42491039 ttaacatggatgt 42491051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22751575 - 22751655
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatcca 82  Q
    ||||||| |||| ||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||| |||||||||||    
T  22751575 cgtctttatgcggcgttgtttgcctttcttgtttcgttcaactatttgttcagttcagattgtcagatca-gcttcgatcca 22751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 135118 - 134953
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    ||||||||||||||||||  |||||||||||  | ||||||||| ||  |||||||||||| |||| ||||||||||||   |||| ||| ||||||| |    
T  135118 tttgtgcgacgttgtttgattttcttgtttctcttaggtatttgatcggttcagattgtcaaatca-gcttcgatccag---tgcagatccaatcaatga 135023  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    |||||| ||| || ||| || |||| ||||||||| | ||||  | | | ||||||||||||||||||||    
T  135022 ctttggcgtcatccacgttgcagatctggagacatggttatttcgaatatttaaatatagtcatatgtgt 134953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 16273601 - 16273703
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||||||||||| ||| |||| ||||||||| || ||||  |||||||| | ||||| ||||||||||||||| |||||||||| ||||||| |||    
T  16273601 tgcagatcaaatcaatgactctggactcgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatgtgtaggctttagtac 16273700  T
Q  187 ttt 189  Q
    |||    
T  16273701 ttt 16273703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 29804652 - 29804444
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||| | |||    | | |||||||| ||||||| ||||||||| ||||||||| |||||||||  |   ||| ||| || ||    
T  29804652 cgtctttgtgcgacgttgttttttttt----tcttgttcaggtgtttgttcgattcagattatcagatcag-cttcgatccgat---gcagatccaacca 29804561  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||  || |||||| || ||||  |||| ||| | ||||| ||| | |||||||||||||||| ||| |||||   |||||||| ||||||||    
T  29804560 atgactttggcatcatcaacgttgcagatccggaggcatggctattccggatatttaaatatagtcatatttgtaggcttatgtactttgccgttttatg 29804461  T
Q  201 ctattaacattgatgtc 217  Q
    |||||||||| ||||||    
T  29804460 ctattaacatggatgtc 29804444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 191
Target Start/End: Original strand, 14707724 - 14707905
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||| |||||||||||||||||||||| || |||||||||||| ||||| |||||| |||||  |||||||||   | |||| ||| ||| ||| |    
T  14707724 tttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattcaaattgtctgatca-tcttcgatcc---aatgcagatccaattaatga 14707819  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgc 191  Q
    ||||    ||||| | | || |||| || |||||| ||||||||||| || | ||||||||||||||||| ||||||  ||||||||    
T  14707820 ctttatcatcgtccatgttgcagatctgaagacat-ggtattctggatacatgaatatagtcatatgtgtaggcttttgtactttgc 14707905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 22379666 - 22379600
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||| |||||||||| |||||||| ||||||||||| |||||||| ||| |||||||||||||||    
T  22379666 tttgtgtgacgttgtttttctttcttatttcgttcaggcatttgttcgatttagattgtcagatcag 22379600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 3266623 - 3266740
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||||||||  ||| |  |||||||||||||||||||||| ||| ||| | | |||||||  ||||||    
T  3266623 caatgactttggtgtcgtcaacgttgtagatccggagacatgagtacttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgtttta 3266722  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  3266723 tgctattaacatggatgt 3266740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 37890453 - 37890396
Alignment:
Q  14 cgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||| |||||||||||||||| ||||||||||  ||||||||||||||||||    
T  37890453 cgttgtttgtttttcttgtttcgttcacgtatttgttcgtttcagattgtcagatcag 37890396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 44681601 - 44681808
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||| ||||||||||||||||||||||||||| || ||||| ||   |||||||||||| | ||| ||||||||| ||   | | ||| ||||||| |    
T  44681601 tttgtgggacgttgtttgtctttcttgtttcgtttagatatttattatgttcagattgtcaaaccag-cttcgatccggt---gtagatccaatcaatga 44681696  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    |||||   |  || | | || ||||| |||||||| |||||||  |||||||||| |||||||||| ||| | ||||  |||||||  |||||| |||||    
T  44681697 ctttgacataatccaggttgcagattcggagacatgggtattccagagacttaaaaatagtcatatatgtagacttttgtactttgtcgttttaagctat 44681796  T
Q  205 taacattgatgt 216  Q
    |||||| |||||    
T  44681797 taacatggatgt 44681808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 33530424 - 33530242
Alignment:
Q  29 ttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaaga 128  Q
    |||||| ||||| ||||||||||  |||||||||||| ||||| ||| ||||||||   ||||||| ||||||| | ||||| ||| |||||| || |||    
T  33530424 ttgttttgttcatgtatttgttcggttcagattgtcaaatcag-cttagatccagt---gcaaatccaatcaatgaatttggcgtcatcaacgttgcaga 33530329  T
Q  129 tttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    |   |||||||  |||||  |||||||| |||||||||||| |||| || |||  || ||||| || ||||| ||||||||| ||||    
T  33530328 tcctgagacatgagtatttcggagacttgaatatagtcataagtgtaggtttttgtattttgccgtgttatgttattaacatggatg 33530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 37375925 - 37375814
Alignment:
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||||||| |||||||||| || |||| |||||||||  |||||| |||||| | ||||||||||||| ||| ||| |   |||||||  |||||||||||    
T  37375925 actttggcgtcgtcaacgttgcagatctggagacatgagtattcaggagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatgcta 37375826  T
Q  204 ttaacattgatg 215  Q
    ||||||| ||||    
T  37375825 ttaacatggatg 37375814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 38273185 - 38273252
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||| ||||||||||||| ||||||| |   ||||||||||||||||||||||||||| |||||    
T  38273185 ggagacttgaatatagtcatatttgttggcatatgtactttgctgttttatgctattaacatggatgt 38273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8319452 - 8319620
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| || ||||||||||||||||||||  ||||| ||||| ||  |||||||||| |||||| |||| |||||||   |||| | | |||||    
T  8319452 cgtctttgtgcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagattgttagatca-gctttgatccag---tgcagacccaatca 8319547  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtg 173  Q
    || ||||||| ||| || ||| || ||||  |||||||| | | ||| ||||| || ||||||| ||||||||    
T  8319548 atgactttggcgtcatccacgttgcagatccggagacatggttgttccggagatttgaatatagccatatgtg 8319620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23177560 - 23177511
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgtt 50  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  23177560 cgtctttgtgcggcgttgtctgtctttcttgttttgttcaggtatttgtt 23177511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 24470679 - 24470752
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| ||||| |||||||||||||||||||  ||| ||  |||||||| |||||||||||||||||| |||||    
T  24470679 tattccggagatttaaatatagtcatatgtgaaggcatttgtactttgccgttttatgctattaacatggatgt 24470752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 24475627 - 24475700
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| ||||| |||||||||||||||||||  ||| ||  |||||||| |||||||||||||||||| |||||    
T  24475627 tattccggagatttaaatatagtcatatgtgaaggcatttgtactttgccgttttatgctattaacatggatgt 24475700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 32741022 - 32741106
Alignment:
Q  132 ggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||  ||||||  ||||| ||||||||||||||| ||| ||| |  |||||||| ||||||||||||||||||| |||||    
T  32741022 ggagacatgagtattccagagacataaatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatggatgt 32741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 215
Target Start/End: Original strand, 9137192 - 9137303
Alignment:
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||||||| |||||||||| || ||||  ||||||||| |||||| |||||||| ||| ||||||||| ||| | | | | |||||||   ||||||||||    
T  9137192 actttggcgtcgtcaacgttgcagatccggagacataagtattccggagacttgaatttagtcatatttgtagacataagtactttgtcattttatgcta 9137291  T
Q  204 ttaacattgatg 215  Q
    ||||||| ||||    
T  9137292 ttaacatggatg 9137303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 21329270 - 21329206
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    |||||||||| |||||||||||||  |  || |||||||| ||||||||||||||||||||||||||    
T  21329270 ctttgtgcgatgttgtttgtcttt--tcctttgttcaggtgtttgttcaattcagattgtcagatca 21329206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 22751667 - 22751750
Alignment:
Q  133 gagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||| | ||| ||||| || ||||||||||||||||| ||||||  |||||| | |||||||| ||||||||| |||||    
T  22751667 gagacatagcttttccggagaattgaatatagtcatatgtgtaggcttttgtactttaccgttttatgttattaacatagatgt 22751750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 45457440 - 45457369
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| |||||||||||||||||| || ||||  ||||||||  ||||||||||||| | |||||||||||||    
T  45457440 caatgactttggagtcgtcaacgttgcagatccggagacatgagtattctggagacatgaatatagtcatat 45457369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 45949574 - 45949459
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||| ||||||| ||||||| |||||||||| || ||||  |||| |||   ||||| ||||| || ||||||||||||| ||| |||||   |||    
T  45949574 tgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgactattccggagattttaatatagtcatatttgtaggcttatgtac 45949475  T
Q  187 tttgctgttttatgct 202  Q
    ||||||||||||||||    
T  45949474 tttgctgttttatgct 45949459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24045257 - 24045188
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    |||||||||| | | |||||||| |||||||||| | ||| ||||||| || ||||||||||||||||||    
T  24045257 cgtctttgtgtggcattgtttgtatttcttgttttgctcatgtatttgatcgattcagattgtcagatca 24045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 204
Target Start/End: Complemental strand, 44482757 - 44482652
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||||||||  |||||| |||||| | ||||||||||||| ||| ||| |   |||||||| ||||||    
T  44482757 caatgactttggtgtcgtcaacgttgcagatccggagacatgagtattccggagacattaatatagtcatatttgtaggcatatgtactttgccgtttta 44482658  T
Q  199 tgctat 204  Q
    ||||||    
T  44482657 tgctat 44482652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 45482317 - 45482418
Alignment:
Q  115 gtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgat 214  Q
    ||||||| || ||||  ||||||||  |||||| |||||||| ||||||||||||| ||| ||  |  ||||||||  |||||||||||||||||| |||    
T  45482317 gtcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggtatagatactttgtcgttttatgctattaacatggat 45482416  T
Q  215 gt 216  Q
    ||    
T  45482417 gt 45482418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15123953 - 15123897
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagatt 61  Q
    ||||||| ||||||||||||||||||||||| |||   |||||||||| ||||||||    
T  15123953 tttgtgcaacgttgtttgtctttcttgtttcattcgactatttgttcagttcagatt 15123897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 22379541 - 22379481
Alignment:
Q  150 gagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    ||||||| ||||||||||||||||  || |||  |||||||| ||||||||||||||||||    
T  22379541 gagacttgaatatagtcatatgtgcaggtttttttactttgccgttttatgctattaacat 22379481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 21552379 - 21552222
Alignment:
Q  54 ttcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggaga 153  Q
    |||||||||||||||| | ||||||||||   ||||| ||| || |||| ||||||| ||| |||||| || ||||  | || |||   ||||  |||||    
T  21552379 ttcagattgtcagatccg-cttcgatcca---ctgcagatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatgactatttcggaga 21552284  T
Q  154 cttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
     || ||||||||||||| ||| |||||   ||||||||||||||||| ||||||||| ||||    
T  21552283 ttttaatatagtcatatttgtaggcttatgtactttgctgttttatgttattaacatggatg 21552222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25855197 - 25855092
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||| | ||| |||||  ||||  ||||||||||| ||  ||||| ||||||||| | ||||||||||||   |||||||| |||||    
T  25855197 cgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcaggttgtcagatta-gcttcgatccag---tgcaaatccaatca 25855102  T
Q  101 ataactttgg 110  Q
    || |||||||    
T  25855101 atgactttgg 25855092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 16263544 - 16263586
Alignment:
Q  29 ttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||||||||||||||  |||||||||||| |||||    
T  16263544 ttgtttcgttcaggtatttgttcggttcagattgtcaaatcag 16263586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 27706562 - 27706485
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccag 83  Q
    |||||||||  ||||||||||||||  | | ||||| || ||||||| ||||||||||||| |||| ||||||||||||    
T  27706562 tttgtgcgatattgtttgtctttctcatcttgttcaagtgtttgttcgattcagattgtcaaatca-gcttcgatccag 27706485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 25855038 - 25854977
Alignment:
Q  155 ttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||||||||||||||  ||  |  ||||||| ||||||||||||||||||| |||||    
T  25855038 ttaaatatagtcatatgtgtaagcaattgtactttgttgttttatgctattaacatggatgt 25854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 36719436 - 36719319
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| ||| |||||| |  ||||  ||||||||  |||||  |||||| | ||||||||||||| ||| ||| | | ||||| || ||||||    
T  36719436 caatgactttggcgtcatcaacgttccagatccggagacatgagtatttcggagacatgaatatagtcatatttgtaggcataagtacttcgccgtttta 36719337  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  36719336 tgctattaacatggatgt 36719319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 40657819 - 40657770
Alignment:
Q  16 ttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtca 65  Q
    |||||||||||||||||||| ||||| |||||||| | ||| ||||||||    
T  40657819 ttgtttgtctttcttgtttctttcagatatttgttaagttcggattgtca 40657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 47156660 - 47156733
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| ||||| |||||||||||||||||||| | | ||  |||||||  |||||||| ||||||||| |||||    
T  47156660 tattccggagatttaaatatagtcatatgtgtagacatttgtactttgtcgttttatgttattaacatggatgt 47156733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Original strand, 10094771 - 10094803
Alignment:
Q  184 tactttgctgttttatgctattaacattgatgt 216  Q
    |||||||| ||||||||||||||||||||||||    
T  10094771 tactttgccgttttatgctattaacattgatgt 10094803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 22747386 - 22747322
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||| |||||||||| || ||||||| ||| ||  |||||| |||||||| |||||||||||||    
T  22747386 tttggcgtcgtcaacgttgcagatttgtagaaatgagtattccggagacttgaatatagtcatat 22747322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 41554624 - 41554835
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||| ||||||||||||   ||| |||||||||    
T  41554624 cgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagattgtcagatcag-cttcgatccagt---gcagatcaaatca 41554719  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||| ||||||||| || ||||  |||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  41554720 atgactttggaatcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 41554819  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  41554820 ctattaacatggatgt 41554835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18472703 - 18472493
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||   ||| |||||||||    
T  18472703 cgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattgtcagatcaa-cttcgatccagt---gcagatcaaatca 18472608  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||| ||||||||||| || |||| |||||||||  |||||| ||||||||| |||||||||||||||| ||||||| ||||||| |||||||||    
T  18472607 atgactttgtagtcgtcaacgttgtagatctggagacatgagtattccggagacttacatatagtcatatgtgtaggctttagtactttgttgttttatg 18472508  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  18472507 ctattaacatggatg 18472493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 33486546 - 33486343
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| ||||||||||||   ||| |||||| ||    
T  33486546 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcaaatcag-cttcgatccagt---gcagatcaaacca 33486451  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||  |||| ||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||    
T  33486450 atgactttggagtcgtcaacgttgcagatccggaggcatgggtattctggagacttaaatatggtcatatgtgtaggctttagtactttgccgttttatg 33486351  T
Q  201 ctattaac 208  Q
    ||||||||    
T  33486350 ctattaac 33486343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20270851 - 20271062
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||||||   ||| |||||||||    
T  20270851 cgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcag-cttcaatccagt---gcagatcaaatca 20270946  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||| || ||||  |||||||| | ||||  |||||||||||||||||||||||||| | ||||| |||||||  ||||||||    
T  20270947 atgactttggagtcttcaacgttgcagatccggagacatggatatttcggagacttaaatatagtcatatgtgtagactttagtactttgtcgttttatg 20271046  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  20271047 ctattaacatggatgt 20271062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 34844063 - 34844264
Alignment:
Q  11 cgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttgg 110  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||   ||| ||||||||||| |||||||    
T  34844063 cgacgttgtttgtcttttttgtttcgttcaggtatttgctcgattcagattgtcagatcag-cttcgatccagt---gcagatcaaatcaatgactttgg 34844158  T
Q  111 agtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    ||||||||| | || |||   ||||| || |||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||    
T  34844159 agtcgtcaatgttgcagacccggagatatgggtattctggcgacttaaatatagtcatatgtgtaggctttagtactttgccgttttatactattaacat 34844258  T
Q  211 tgatgt 216  Q
     |||||    
T  34844259 ggatgt 34844264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 8812128 - 8811919
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| || |||||||||||||||||||| |||| |||||||||||  |||||||||||||||||| ||||| ||||||   ||| |||||||||    
T  8812128 cgtctttgtggga-gttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcag-cttcggtccagt---gcagatcaaatca 8812034  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||| ||||| |||||| || |||| ||||||||  ||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  8812033 atgactttagagtcatcaacgttgcagatctggagacaatggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 8811934  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  8811933 ctattaacatggatg 8811919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 40774897 - 40775103
Alignment:
Q  1 cgtctttgtgcgacgttgt-ttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatc 99  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||   | | ||||||||    
T  40774897 cgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcag-cttcgatccagt---gtagatcaaatc 40774992  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    ||| ||||||||||| |||||| || ||||  |||||||| ||||||| ||| |||||||||||||||||||||| ||||||| |||||||  |||||||    
T  40774993 aatgactttggagtcttcaacgttgcagatccggagacatgggtattccggaaacttaaatatagtcatatgtgtaggctttagtactttgtcgttttat 40775092  T
Q  200 gctattaacat 210  Q
    |||||||||||    
T  40775093 gctattaacat 40775103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22397525 - 22397327
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||   || |||| |||||||||    
T  22397525 cgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagattgtcagatca-gcttcgatc---tagtgcagatcaaatca 22397430  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||||||     || |||| ||||||||| | ||||| ||||||||||||||||||||||||||   |||| ||  ||||||||||||||    
T  22397429 atgactttggagtcgtc----ttgcagatctggagacattgatattccggagacttaaatatagtcatatgtgtaaactttgattttttgctgttttatg 22397334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 14910638 - 14910443
Alignment:
Q  16 ttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcg 115  Q
    ||||||||||||||||||||||||| ||||||||||  || ||||||||||||||  ||||||||||     ||| ||||||||||| |||||| ||| |    
T  14910638 ttgtttgtctttcttgtttcgttcatgtatttgttcgttttagattgtcagatcaa-cttcgatccatc---gcatatcaaatcaatgactttgaagttg 14910543  T
Q  116 tcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    ||||||||| ||||  ||||||||  |||||| ||||||||||||||||| |||||||| || |||| || ||||| |||||||||||||||||| ||||    
T  14910542 tcaacgatgcagatccggagacatgagtattccggagacttaaatatagttatatgtgtaggttttagtattttgccgttttatgctattaacatggatg 14910443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 29310331 - 29310121
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| |||| ||| |||||||| ||||||||||||   |||| ||| |||||    
T  29310331 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcaaattatcagatca-gcttcgatccag---tgcagatccaatca 29310236  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| |||  |  |||||||| ||||||||    
T  29310235 atgactttggcgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggcaattctactttgccgttttatg 29310136  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  29310135 ctattaacatggatg 29310121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 31645966 - 31646176
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||| ||| |||||||||||||||||  |||||||||||   |||| ||| |||||    
T  31645966 cgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcagttcagattgtcagatca-acttcgatccag---tgcagatccaatca 31646061  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| |||  |  |||||||| ||||||||    
T  31646062 atgactttggtgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggcaattgtactttgccgttttatg 31646161  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  31646162 ctattaacatggatg 31646176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6647890 - 6647679
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| |||||||||||||||||||||  ||||| |||||||||  ||||||||||||| |||| ||| |||| |||   ||| ||| |||||    
T  6647890 cgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagattgtcaggtcag-cttagatcaagt---gcagatccaatca 6647795  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||| || ||| |||||| || ||||  |||||||| | ||||| |||||||| ||||||||||||||||| ||||||  |||||| | |||||| |    
T  6647794 atgacttcggcgtcatcaacgttgcagatccggagacatggatattccggagactttaatatagtcatatgtgtaggcttttgtacttttccgttttaag 6647695  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  6647694 ctattaacatggatgt 6647679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 4070688 - 4070897
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| |||||||||   || |||| ||| |||||    
T  4070688 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgtttcagattgtcagatca-gcttcgatc---tagtgcagatccaatca 4070783  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||  ||  |||||||| ||||||||    
T  4070784 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggtatttgtactttgc-gttttatg 4070882  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  4070883 ctattaacatggatg 4070897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 6887155 - 6886945
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| ||||||| |||  ||||||||||| ||| |||||||||| |||| | ||||||||||||   |||| ||| |||||    
T  6887155 cgtctttgtgcgacgttgtttgtttttcttgcttctctcaggtatttgatcagttcagattgttagatta-gcttcgatccag---tgcagatccaatca 6887060  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| |  |||| ||||| |||||||||||||||||||| |||  |  |||||||| ||||||||    
T  6887059 atgactttggcgtcatccacgttgcagatccggatacatggtaattccggagatttaaatatagtcatatgtgtaggcaattgtactttgccgttttatg 6886960  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  6886959 ctattaacatggatg 6886945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 4726905 - 4726738
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||| ||||||   |||| ||| |||||    
T  4726905 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcaatccag---tgcagatccaatca 4726810  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgt 172  Q
    || ||||||| ||| || ||| || ||||  ||||||||   ||||| ||||| ||||||||||||||||||    
T  4726809 atgactttggtgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgt 4726738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 28618739 - 28618949
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||| ||||| |||||||||||  ||||||||||| ||  || |||||||||||||| ||||||||||||   |||| ||| |||||    
T  28618739 cgtctttgtgcgacgttatttgtttttcttgtttctctcaggtatttgatcgctttagattgtcagatca-gcttcgatccag---tgcagatccaatca 28618834  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||  ||| | |||||||||||||||||||| ||| ||  |||||||  ||||||||    
T  28618835 atgactttggcgtcatccacgttgcagatccggaaacatggttatttcggaaatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatg 28618934  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  28618935 ctattaacatggatg 28618949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 37425161 - 37425319
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||      |||| |||||||   || | |||||||||    
T  37425161 cgtctttgtgcgacgttgtttgtcattcttgtttcgtacaggtatttgttcagtttagattgtca------gctttgatccag---tgtagatcaaatca 37425251  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcat 168  Q
    || ||||||||||| |||||| || ||||| |||  ||| | ||||| ||||||||||||||||||||    
T  37425252 atgactttggagtcctcaacgttgcagattcggatgcatggttattccggagacttaaatatagtcat 37425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28500826 - 28501037
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| ||||| | ||||||||||||||| |||||||| |||||||||||  |||||||||||| ||||  |||||||||||||| |   ||| |||||    
T  28500826 cgtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcatatca-acttcgatccagtacgg---atccaatca 28500921  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  |||||||| |||||||||||||| | ||||||||||||| ||| ||  ||  |||||||  ||||| ||    
T  28500922 atgactttgtcgtcctccacgttgcagatccggagacatgggtattctggagacatgaatatagtcatatctgtaggtgtttgtactttgtcgttttttg 28501021  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  28501022 ctattaacatggatgt 28501037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 35906406 - 35906616
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| |||||||| || ||||| ||||||||||||   |||| ||| |||||    
T  35906406 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattatcggatca-gcttcgatccag---tgcagatccaatca 35906501  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||  || ||||  ||| |||| | ||||  ||||| |||||||||||||||||||| |||  |  || ||||  ||||||||    
T  35906502 atgactttggcgtcatccacattgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtaggcaattgtattttgtcgttttatg 35906601  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  35906602 ctattaacatggatg 35906616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 40565132 - 40564923
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||  |   | |||||||| ||||||  ||||| |||||||||||||  |||||||||||   ||||||| || ||    
T  40565132 cgtctttgtgcgacgttgtttgtcttt--tccctagttcaggtgtttgtttgattcatattgtcagatcagt-ttcgatccagt---gcaaatccaacca 40565039  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |||||| || ||||  |||||||| | ||||| ||||| || ||||||||||||| ||| |||||   |||||||  ||||||||    
T  40565038 atgactttggcgtcatcaacgttgcagatccggagacatggctattccggagattttaatatagtcatatttgtaggcttatgtactttgtcgttttatg 40564939  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  40564938 ctattaacatagatgt 40564923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 15710680 - 15710892
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||  |||  |||||||||||| |||| ||||   || |||| ||| ||||||    
T  15710680 gtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgtcagatca-gcttagatc---tagtgcagatccaatcaa 15710775  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaat---atagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |  | |||| ||| |||||| || |||| | |||||||| |||||| ||| | ||||||   ||||||||||| || | ||||  ||||||| |||||||    
T  15710776 tggc-ttggcgtcatcaacgttgcagatctagagacatatgtattccggatatttaaatataatagtcatatgcgtagtcttttgtactttgttgtttta 15710874  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  15710875 tgctattaacatggatgt 15710892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5378439 - 5378650
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||| ||||||||||||||||  |||| | |||| ||  ||||||||||| ||||||  ||||||||| |   ||| |||||||||    
T  5378439 cgtctttgtgcgacattgcttgtctttcttgtttctctcagatgtttgatcggttcagattgtcggatcagt-ttcgatccaat---gcagatcaaatca 5378534  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||||||||   ||||| ||||| |||||| ||||||||||||| ||  ||  ||| ||| |||||||||    
T  5378535 atgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatgtagtcatatgtgtaggaatttgtaccttgttgttttatg 5378634  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  5378635 ctattaacatggatgt 5378650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 37219228 - 37219351
Alignment:
Q  93 tcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgct 192  Q
    |||||||||| |||||||||||||||| | || ||||  ||||||||  |||||  ||||||||| |   |||||||||||| ||||||| ||||||||     
T  37219228 tcaaatcaatgactttggagtcgtcaatgttgcagatccggagacatgtgtattgcggagacttagaaccagtcatatgtgtaggctttagtactttgcc 37219327  T
Q  193 gttttatgctattaacattgatgt 216  Q
    |||||||||||||||||| |||||    
T  37219328 gttttatgctattaacatggatgt 37219351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 2415538 - 2415619
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||| |||||||||||| ||||| | |||||||||||||||  ||||||||||||||||| |||||||||||||    
T  2415538 gtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagattgtcagatca-gcttcgatccagt 2415619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 210
Target Start/End: Original strand, 8957344 - 8957548
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    ||||||||||||||||||||||||||  | | | |||||||| |||||||| ||||||||||||||||| ||||||||||   | |||| ||  || |||    
T  8957344 gtctttgtgcgacgttgtttgtcttttctctcttgttcaggtgtttgttcagttcagattgtcagatca-gcttcgatcc---aatgcagattcaaccaa 8957439  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    | ||||| | ||| |||||| || ||||  ||||| || | ||||  ||||| || ||||||||||||| |||||||||   |||||||  ||||||||     
T  8957440 tgacttttgcgtcatcaacgttgcagatccggagatatggctatttcggagattttaatatagtcatatttgttggcttgtgtactttgtcgttttatgt 8957539  T
Q  202 tattaacat 210  Q
    |||||||||    
T  8957540 tattaacat 8957548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 32387602 - 32387812
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| ||||||||| |||||||||||  ||||||||||||||| ||||| ||||||||| || |||||||||   || |||| ||| |||||    
T  32387602 cgtctttgtgcggcgttgtttgcctttcttgttttattcaggtatttgttcgattca-attgtcagacca-gcttcgatc---tagtgcagatccaatca 32387696  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||   ||||  ||| || ||||  |||||||||||| |||  || |||| ||||||||||||||||| ||||||  ||| |||  ||||||||    
T  32387697 atgattttgacatcgttcacgttgcagatccggagacataggtgttccagatacttgaatatagtcatatgtgtaggcttttgtaccttgtcgttttatg 32387796  T
Q  201 ctattaacattgatgt 216  Q
     |||||| || |||||    
T  32387797 ttattaatatggatgt 32387812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29154357 - 29154567
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||| |||| ||||||||||| ||||||| ||| ||||||||  || ||||||||| || |||||||||| |||   |||| ||| ||| |    
T  29154357 cgtctttgtgcgatgttggttgtctttcttttttcgtttaggcatttgttcggtttagattgtcaaat-aggcttcgattcag---tgcagatccaatta 29154452  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| ||| || | | || ||||  ||||||||  |||||| ||||| ||||||||| || ||||||| || |||  |||||||  ||||||||    
T  29154453 atgattttggtgtcatccatgttgcagatccggagacatgagtattccggagagttaaatataatcgtatgtgtaggtttttgtactttgtcgttttatg 29154552  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  29154553 ctattaacatggatg 29154567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19646018 - 19645948
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||| |||||||||||||||||||||||| || | |||||||||  |||||||||||||||||||    
T  19646018 cgtctttgtgtgacgttgtttgtctttcttgtttctttgaagtatttgttagattcagattgtcagatcag 19645948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 28389086 - 28388874
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggt-atttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatc 99  Q
    |||||||  ||| ||||||||||| || ||||||| |||| || ||||||||| |||||||||||| |||| |||| |||||||   || | ||||||||    
T  28389086 cgtctttacgcggcgttgtttgtcatttttgtttctttcaagtcatttgttcagttcagattgtcatatca-gcttagatccag---tgaagatcaaatc 28388991  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    ||| ||||||| |||||| | | || ||||   |||| || ||||||| |||||||| |||||| |||||||||| | ||||  || |||| ||||||||    
T  28388990 aatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatataatcatatgtgtagacttttgtattttgttgttttat 28388891  T
Q  200 gctattaacattgatgt 216  Q
    | |||||| || |||||    
T  28388890 gttattaaaatagatgt 28388874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9034919 - 9034849
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||||| |||| |||||||||||||||  ||||||||||| ||  ||||||||||||||||||    
T  9034919 cgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcag 9034849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 35275879 - 35275819
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagactt 156  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| | ||||||||||||||    
T  35275879 aatcaataactttggcgtcgtcaacgatgcagatatggagacatggttattctggagactt 35275819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13007829 - 13007878
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttc 51  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  13007829 cgtctttgtgcgacgttgtttgtctttcttg-ttcgctcaggtatttgttc 13007878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13079282 - 13079331
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttc 51  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  13079282 cgtctttgtgcgacattgtttgtctttcttg-ttcgttcaggtatttgttc 13079331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 32390623 - 32390557
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagat 68  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||||||||  |||| ||| ||||||    
T  32390623 gtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttcaaattatcagat 32390557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 25962148 - 25962261
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||| | |||||||||| || ||||  |||||||| | ||||| ||| |||| ||||||||||||| ||| ||| |  ||||||||  ||||    
T  25962148 atcaatgacttttgcgtcgtcaacgttgtagatccggagacatggatattccggaaacttgaatatagtcatatttgtaggcatagatactttgtcgttt 25962247  T
Q  197 tatgctattaacat 210  Q
    ||||||||||||||    
T  25962248 tatgctattaacat 25962261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 32347598 - 32347481
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||||||||||| |||||||||  || ||||  ||||||||  |||||| | | || | ||||||||||||| ||| ||| | | |||||||| ||||||    
T  32347598 caataactttggcgtcgtcaacattgcagatccggagacatgagtattccgaaaacatgaatatagtcatatttgtaggcataactactttgccgtttta 32347499  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  32347498 tgctattaacatggatgt 32347481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 13080298 - 13080341
Alignment:
Q  7 tgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttc 51  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  13080298 tgtgcgacgttgtttgtctttcttg-ttcgttcaggtatttgttc 13080341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 23428489 - 23428605
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||||||||  |||||  |||||| ||||||||||||||| ||| ||| |   |||||| | ||||||    
T  23428489 caatgactttggcgtcgtcaacgttgtagatccggagacatgagtatttcggagacataaatatagtcatatttgtaggcataggtacttttccgtttta 23428588  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  23428589 tgctattaacatggatg 23428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 28662362 - 28662418
Alignment:
Q  160 tatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||||||||| ||||||| || ||||| |||||||||||||||||| |||||    
T  28662362 tatagtcatatgtgtaggctttagtattttgccgttttatgctattaacatggatgt 28662418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 39915712 - 39915788
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatata 163  Q
    |||| ||| ||||||||||||||  |||||||||| |||||||| ||||||||  ||||||| ||||||| ||||||    
T  39915712 tgcatatccaatcaataactttgacgtcgtcaacgttgaagattcggagacatgtgtattctagagacttgaatata 39915788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41358180 - 41358244
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatc 69  Q
    |||||||| |||||||||||||||||||||   | ||||||||||||  ||||||||||||||||    
T  41358180 tttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagattgtcagatc 41358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34893921 - 34893854
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagat 68  Q
    ||||||||||||||||||||||| |||||||||||  |||| |||||| ||  |||| ||||||||||    
T  34893921 cgtctttgtgcgacgttgtttgtttttcttgtttccctcagctatttgatcggttcatattgtcagat 34893854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 6681753 - 6681689
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||| |||||||||| || ||||| ||||||||  |||||| |||||||| |||||||||||||    
T  6681753 tttggtgtcgtcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatat 6681689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 34874000 - 34874114
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||| | |||||||||||||||||||||| ||||| ||||| | | ||||| ||||||| ||||  ||||||||   || |||| ||| ||| |||    
T  34874000 tctttgtgtggcgttgtttgtctttcttgtttctttcagatatttatccgattcaaattgtcatatca-acttcgatc---tagtgcagatccaatgaat 34874095  T
Q  103 aactttggagtcgtcaacg 121  Q
     ||||||| ||||||||||    
T  34874096 gactttggcgtcgtcaacg 34874114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 10923973 - 10923906
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    ||||| ||||| |||||||||||||||||| | ||| ||  |||||||  ||||||||||||||||||    
T  10923973 tattcaggagatttaaatatagtcatatgtataggcatttgtactttgtcgttttatgctattaacat 10923906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 210
Target Start/End: Complemental strand, 12524637 - 12524436
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    ||||| ||||||||||||| ||||||| || |||||||| ||  | ||||| ||||||||||||||  ||| |||||||   || | ||| ||||||| |    
T  12524637 tttgtacgacgttgtttgtttttcttgctttgttcaggtgttaatccaatttagattgtcagatca-actttgatccag---tgtagatccaatcaatga 12524542  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    |||||| ||| |||||| || ||||    ||||||   | ||  |||||||| |||||| |||||| ||| ||||||  |||||||   |||||||||||    
T  12524541 ctttggtgtcatcaacgttgtagatccaaagacatgattgtttaggagactttaatataatcatatttgtaggcttttgtactttgtcattttatgctat 12524442  T
Q  205 taacat 210  Q
    ||||||    
T  12524441 taacat 12524436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 28040871 - 28040937
Alignment:
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||||| |||||||||  || ||||| ||||||||  ||||| ||||||| |||||||||||||||    
T  28040871 actttggcgtcgtcaacattgcagattcggagacatgtgtattatggagacataaatatagtcatat 28040937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 41358257 - 41358371
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtt 195  Q
    ||||||| ||||||  |||||||||| |  ||||  | |||||||| |||||  || |||| ||||||||||||||| | | ||||  |||||||| |||    
T  41358257 aatcaatgactttgacgtcgtcaacgttacagatccgaagacatagttattccagatactttaatatagtcatatgtttagacttttgtactttgcggtt 41358356  T
Q  196 ttatgctattaacat 210  Q
    | |||||||||||||    
T  41358357 taatgctattaacat 41358371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41988289 - 41988359
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||| | |||||||||||| |||||||||| | |||||||||   ||||| |||||| |||||    
T  41988289 cgtctttgtgcggctttgtttgtcttttttgtttcgtttaagtatttgtttgtttcaggttgtcatatcag 41988359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 11734670 - 11734609
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| ||||||||||||| ||| ||| |   |||||||| ||||||||||||||||||    
T  11734670 ggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacat 11734609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 208
Target Start/End: Original strand, 27241301 - 27241410
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||| ||| | |||||| ||||||  |||||||||||||| ||| ||| |   || ||||| ||||||    
T  27241301 caatgactttggcgtcgtcaacgttgcagatccggatacagaagtattccggagacaaaaatatagtcatatttgtaggcctaggtattttgccgtttta 27241400  T
Q  199 tgctattaac 208  Q
    ||||||||||    
T  27241401 tgctattaac 27241410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 2415675 - 2415750
Alignment:
Q  143 tattctggagacttaaatatagtcatat--gtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| | |||| |||||||||||||||  |||| ||| || ||||||||  |||||||||||||||||| |||||    
T  2415675 tattccgaagacataaatatagtcatatatgtgtaggcatttatactttgtcgttttatgctattaacatggatgt 2415750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 29098033 - 29098137
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctatt 205  Q
    ||||| |||||||||| || ||||   |||||||  | |||| |||||||| ||||||||||||| ||| ||| |   ||| |||| |||||||||||||    
T  29098033 tttggcgtcgtcaacgttgcagatcaagagacatgaggattccggagacttgaatatagtcatatttgtaggcatatgtaccttgccgttttatgctatt 29098132  T
Q  206 aacat 210  Q
    |||||    
T  29098133 aacat 29098137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16937316 - 16937106
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||   ||| |||||||||    
T  16937316 cgtctttgtgcgacattgtttgcctttcgtgtttcgttcaggtatttgtttagttcagattgtcagatcag-cttcgatccagt---gcatatcaaatca 16937221  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || |||| | ||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  16937220 atgactttggagtcgtcaacgttgcagatctagagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgttgttttatg 16937121  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  16937120 ctattaacatggatg 16937106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 3925667 - 3925457
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||| |||   ||| |||||||||    
T  3925667 cgtctttgtgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagatagtcagatcag-cttcgatcaagt---gcagatcaaatca 3925572  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||||||||||||  |||||| ||||||||||||||| |||||||||| ||||||| |||||||| ||||||||    
T  3925571 atgactttggagtcgtcaacgttgcagatttggagacatgagtattccggagacttaaatataatcatatgtgtaggctttagtactttgccgttttatg 3925472  T
Q  201 ctattaacattgatg 215  Q
     ||||||||| ||||    
T  3925471 ttattaacatggatg 3925457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 10042910 - 10043119
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||   || |||| ||||||||||    
T  10042910 gtcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgttcagttcaaattgtcagatca-gcttcgatc---tagtgcagatcaaatcaa 10043005  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    |||||||||||||||||||| || ||||  ||||||||  |||||| ||||||||||||||||| ||||||| | |||||| |||||||  |||||||||    
T  10043006 taactttggagtcgtcaacgttgcagatccggagacatgtgtattccggagacttaaatatagttatatgtg-tagctttagtactttgtcgttttatgc 10043104  T
Q  202 tattaacattgatgt 216  Q
    ||||||||| |||||    
T  10043105 tattaacatggatgt 10043119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12248691 - 12248478
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcagg--cttcgatccagtactgcaaatcaaat 98  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |    |||||| |||||   ||| |||||||    
T  12248691 cgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattatcagatgatcaacttcgaaccagt---gcagatcaaat 12248595  T
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| |||||||||||||||||  || |||||  ||||||| |||||||  ||||||||||||||||||||||||| ||||||| || ||||| ||||||    
T  12248594 caatgactttggagtcgtcaactttgcagattcagagacatgggtattccagagacttaaatatagtcatatgtgtaggctttagtattttgccgtttta 12248495  T
Q  199 tgctattaacattgatg 215  Q
    || ||||||||| ||||    
T  12248494 tgttattaacatggatg 12248478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 31713053 - 31712843
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||  |||||||||||| ||||| ||||||||||||   ||| |||||||||    
T  31713053 cgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcag-cttcgatccagt---gcagatcaaatca 31712958  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||| || |||| | || |||| |||||||||  |||||| || ||||||||||||||||||||||| ||||||| |||||  | ||||||||    
T  31712957 atgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgtaggctttagtacttgaccgttttatg 31712858  T
Q  201 ctattaacattgatg 215  Q
     ||||||||| ||||    
T  31712857 ttattaacatggatg 31712843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 32256698 - 32256496
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  || ||||||| | |||| |||||||||  |   |||| |||||||||    
T  32256698 cgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagattgttaaatca-gcttcgatcatg---tgcagatcaaatca 32256603  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||| || ||||  |||||||  ||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  32256602 atgactttggagtcatcaacgttgcagatccggagacaagggtattccggagacttaaatatagtcatatgtgtcggctttagtactttgccgttttatg 32256503  T
Q  201 ctattaa 207  Q
     ||||||    
T  32256502 ttattaa 32256496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23766876 - 23767086
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttctt-gtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatc 99  Q
    ||||||||||||||||||||||| ||| || | ||| |||| |||||||||| ||||||||||||||||||| ||||||||||||   | | || |||||    
T  23766876 cgtctttgtgcgacgttgtttgtatttttttggttcattcatgtatttgttcgattcagattgtcagatcag-cttcgatccagt---gtagattaaatc 23766971  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    ||| |||||||||||||||||| || ||||  ||| |||| ||||| | |||| | ||||||||||||||||||| |||||||||||| ||| |||||||    
T  23766972 aatgactttggagtcgtcaacgttgcagatccggaaacatgggtatcc-ggaggcataaatatagtcatatgtgtaggctttaatactctgccgttttat 23767070  T
Q  200 gctattaacattgatg 215  Q
    |||| |||||| ||||    
T  23767071 gctactaacatggatg 23767086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 2629051 - 2629260
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||    |||||||||||||||| ||||||||||||   |||| |||||||||||    
T  2629051 tctttgtgcgacattgtttgtctttcttgtttcgttcaggcatttgtt-tggtcagattgtcagatca-gcttcgatccag---tgcagatcaaatcaat 2629145  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt--tatg 200  Q
     ||||||||||| ||||   || ||| | ||||||||  |||||| |||||||||||||||||||||||||| || |||| |||||||  ||||  ||||    
T  2629146 gactttggagtcctcaatattgtaga-tcggagacatgtgtattccggagacttaaatatagtcatatgtgtaggatttagtactttgtcgttttatatg 2629244  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  2629245 ctattaacatggatgt 2629260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 8054784 - 8054574
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  8054784 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 8054689  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||  || ||||  |||||||| | ||||| | ||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  8054688 atgactttggcgtcatccac-ttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 8054590  T
Q  201 ctattaacattgatgt 216  Q
    ||||||| || |||||    
T  8054589 ctattaaaatggatgt 8054574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 44295453 - 44295663
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  44295453 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 44295548  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||| ||| |||  |  |||||||| |||||||     
T  44295549 atgactttgacgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtaggcaattgtactttgccgttttatc 44295648  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  44295649 ctattaacatggatg 44295663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 41996682 - 41996891
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||  |||||||||||| |||  ||||||||||| ||  |||||||||||||||||| ||||||| ||||   ||| ||| |||||    
T  41996682 cgtctttgtgcgacgtt--ttgtctttcttgattctctcaggtatttgatcggttcagattgtcagatcag-cttcgattcagt---gcagatccaatca 41996775  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||||| ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||  ||||||||    
T  41996776 atgactttggcgtcatccacgttgcagatccggagacatagctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgtcgttttatg 41996875  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  41996876 ctattaacatggatgt 41996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 37659103 - 37659228
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||| ||||||||||||   |||| |||||||||    
T  37659103 cgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagattgtcagatca-gcttcgatccag---tgcagatcaaatca 37659198  T
Q  101 ataactttggagtcgtcaacgatgaagatt 130  Q
    || |||||| ||||||||||| || |||||    
T  37659199 atgactttgaagtcgtcaacgttgcagatt 37659228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 12244190 - 12243982
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaata 103  Q
    ||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||   | |||| ||| |||||||     
T  12244190 ctttgtgcggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattgtcatatca-gctttgatcc---aatgcagatccaatcaatg 12244095  T
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||||||  |||||||| | || || |  ||||| || |||||||  ||||||| |||||||| |||||||| ||||||  |||||||  |||||||| ||    
T  12244094 actttgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatatagttatatgtgtaggcttttgtactttgtcgttttatgtta 12243995  T
Q  204 ttaacattgatgt 216  Q
    ||||||| |||||    
T  12243994 ttaacatggatgt 12243982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 16996866 - 16996655
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||| ||||||  ||||||||||| ||  ||||||||||||| || |||||||||||||   |||| ||| |||||    
T  16996866 cgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgtcagttc-ggcttcgatccag---tgcagatccaatca 16996771  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || | || || | |||| | ||||| ||| | |||||||||||||||| ||| ||| ||  |||||||| ||||||||    
T  16996770 atgactttggcgtcatccacgttgcaaatctgaaaacatggttattccggatatttaaatatagtcatatatgtaggcatttgtactttgccgttttatg 16996671  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  16996670 ctattaacatggatgt 16996655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 32104813 - 32104603
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| | ||||||||||   |||| ||  |||||||    
T  32104813 tctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gtttcgatccag---tgcagattcaatcaat 32104718  T
Q  103 aactttg-gagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    |||||||   ||| || ||| || ||||  |||||||| | ||||| ||||| ||||||||||||||||||||  || ||  ||| |||| |||||||||    
T  32104717 aactttgaccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtatgcatttgtaccttgccgttttatgc 32104618  T
Q  202 tattaacattgatgt 216  Q
    ||||||||| |||||    
T  32104617 tattaacatggatgt 32104603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 5457208 - 5457377
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| ||||||||||||||||||||||||||||  ||| ||||||| ||  ||||||||||||||||| |||||||||   || |||| ||| |||||    
T  5457208 cgtcttcgtgcgacgttgtttgtctttcttgtttctctcaagtatttgatcggttcagattgtcagatca-gcttcgatc---tagtgcagatccaatca 5457303  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    |||||||||  ||| || ||| || ||||  |||||||| | ||||| ||||| ||||||||||||||||||||    
T  5457304 ataactttgccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgt 5457377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 9270158 - 9270369
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  |||||||||||| |||| ||||||||||||   |||| ||| ||||     
T  9270158 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatca-gcttcgatccag---tgcagatccaatcg 9270253  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    ||  ||| || | | || | | || |||| ||||||||| | ||||||| ||| |||||||||||||||||||| ||| ||  ||||||||  |||||||    
T  9270254 atggcttcggcggcatctatggtgcagatctggagacatggttattctgaagatttaaatatagtcatatgtgtaggcatttgtactttgccattttatg 9270353  T
Q  201 ctattaacattgatgt 216  Q
    || ||||||| |||||    
T  9270354 ctgttaacatggatgt 9270369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 37129652 - 37129449
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| |||||||| |||||||||||  |||||||||||  |  ||||||||||||||||| ||||||||| ||   |||| ||| |||||    
T  37129652 cgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgaacgcttcagattgtcagatca-gcttcgatcaag---tgcagatccaatca 37129557  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| | ||| |||||||||||||||||||| ||| ||  |||||||  ||||||||    
T  37129556 atgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgacgttttatg 37129457  T
Q  201 ctattaac 208  Q
    ||||||||    
T  37129456 ctattaac 37129449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5917719 - 5917515
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||  |||||||||||||||        |||||||   |||| ||| |||||    
T  5917719 cgtctttgtgcgacgttgtttgtctttcctattttgttcaggtatttgttcggttcagattgtcagat--------gatccag---tgcagatccaatca 5917631  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||||||| |  || |||   | |||||| |||||| ||||||||| |||||| |||||||||| |||| |  |||||||   |||||||    
T  5917630 atgactttggcgtcgtcagcattgcagacccgaagacatgggtattttggagacttgaatatattcatatgtgtaggctattgtactttgtcattttatg 5917531  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  5917530 ctattaacatggatgt 5917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 15665676 - 15665889
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||  |||||||||||| || ||||| ||||||||||||||||  ||||||||||||| ||| |||| |||||||   |||| ||| |||||    
T  15665676 cgtctttgtgcagcgttgtttgtctatcctgttttgttcaggtatttgttcggttcagattgtcaggtca-gcttagatccag---tgcagatccaatca 15665771  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatag--tcatatgtgttggctttaatactttgctgtttta 198  Q
    || ||||||| ||| ||| || || ||||  |||||||| ||||||  |||||||| |||||||  ||||||  || ||||||   ||| ||| ||||||    
T  15665772 atgactttggtgtcatcagcgttgcagatccggagacatgggtatttcggagacttgaatatagtctcatattggtaggcttttgcactatgccgtttta 15665871  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  15665872 tgctattaacatggatgt 15665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 37719993 - 37720179
Alignment:
Q  17 tgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgt 116  Q
    ||||||||||||||||||||||| |||||||||||  || ||| | ||||| ||  ||||||||||||   ||| ||| ||||||  |||||||  || |    
T  37719993 tgtttgtctttcttgtttcgttcgggtatttgttcggtttagaatatcagaccaa-cttcgatccagt---gcagatctaatcaaagactttggcttcat 37720088  T
Q  117 caacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaa 207  Q
    ||||| || ||||   ||||||||||||||| | |||||| ||||||||||||||||| ||||||  |||||||  |||||||||||||||    
T  37720089 caacgttgcagatccagagacataggtattccgtagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaa 37720179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 13977556 - 13977757
Alignment:
Q  12 gacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttgga 111  Q
    |||||||||||||||||||||||||||||||||||||  |  |||||||| ||||||||  ||||||| |||   |||||||  ||||||  ||||||      
T  13977556 gacgttgtttgtctttcttgtttcgttcaggtatttgaccggttcagattatcagatca-acttcgattcag---tgcaaattcaatcaacgactttgac 13977651  T
Q  112 gtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtt--ttatgctattaaca 209  Q
     ||||||||| || ||||  ||||| ||  ||||||||||||||| |||||| |||||||||  ||||||  ||| |||| |||  ||||||||||||||    
T  13977652 atcgtcaacgttgcagatccggagatatgagtattctggagacttgaatataatcatatgtgcaggcttttgtaccttgccgttaattatgctattaaca 13977751  T
Q  210 ttgatg 215  Q
    | ||||    
T  13977752 tagatg 13977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 26937665 - 26937732
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  26937665 ctttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagattgtcagatcag 26937732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 14115804 - 14115636
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||| |||||  |||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| ||||||    
T  14115804 gtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatcaa 14115709  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    | ||||||| ||| || ||| || |||| || |||||| | ||||| || || ||||||||||| ||||||||    
T  14115708 tgactttggcgtcatccacgttgcagatctgaagacattgttattcaggcgatttaaatatagttatatgtgt 14115636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 7014362 - 7014239
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||||||||||| |||||| || |||||||| || ||||| |||||||| | ||||   || |||||| ||||||||||||||| || |||| |||    
T  7014362 tgcatatcaaatcaatgactttgaagccgtcaacgttgcagattcggagacatggatatttcagatacttaattatagtcatatgtgtaggttttagtac 7014263  T
Q  187 tttgctgttttatgctattaacat 210  Q
    |||| ||||||||| |||||||||    
T  7014262 tttgttgttttatgttattaacat 7014239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 9992804 - 9993007
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| ||| |||||||| |||||||||||  | || |||||| ||  |||| |||||||||| || |||| ||||| |   ||| ||| |||||    
T  9992804 cgtctttgtgtgacattgtttgtttttcttgtttctcttagatatttgatcggttcaaattgtcagataag-cttcaatccaat---gcagatccaatca 9992899  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |  ||||||| ||| || ||| || ||||  | |||||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||||||||||||    
T  9992900 acgactttggcgtcatccacgttgcagatccg-agacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgctgttttatg 9992998  T
Q  201 ctattaaca 209  Q
    |||||||||    
T  9992999 ctattaaca 9993007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32412927 - 32413006
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatcc 81  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||| |   ||||||||||||||||| ||||||||||    
T  32412927 cgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttgattggttcagattgtcagatca-gcttcgatcc 32413006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 5328095 - 5328291
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    ||||||||||||||||||| |||||||| ||  ||| ||||||| ||  ||||||||||||||||| |||| ||||   || |||| ||| ||||||| |    
T  5328095 tttgtgcgacgttgtttgtttttcttgtctc--tcaagtatttgatcggttcagattgtcagatca-gctttgatc---tagtgcagatccaatcaatga 5328188  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    ||||||   |||| ||| || ||||  ||| |||| | ||||| ||||| ||||||||||| ||||||||  || ||  |||||||| ||||||| ||||    
T  5328189 ctttgg---cgtccacgttgcagatccggatacatggttattccggagatttaaatatagttatatgtgtatgcatttgtactttgccgttttatactat 5328285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 10338714 - 10338597
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||||||||  |||||| ||||||  |||||||||||||| ||| ||| |   |||||||| ||||||    
T  10338714 caatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacaaaaatatagtcatatttgtaggcataggtactttgccgtttta 10338615  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  10338614 tgctattaacatggatgt 10338597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 13864498 - 13864578
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||| |||| |||||||||||||||||||||  | ||||||||| |||| ||||||||||||||||| |||||||| ||||    
T  13864498 tctttctgcggcgttgtttgtctttcttgttttatgcaggtatttcttcagttcagattgtcagatca-gcttcgatacagt 13864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 10148182 - 10148298
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||| | |||||||||| || ||||  ||||||||  |||||  |||||||||||||||||||||| ||| ||| | | |||||||  ||||||    
T  10148182 caatgactttagcgtcgtcaacgttgcagatccggagacatgagtatttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgtttta 10148281  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  10148282 tgctattaacatggatg 10148298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31874221 - 31874303
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||| ||  |||||||||||||| ||  ||||||||||||    
T  31874221 cgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagaaca-tcttcgatccagt 31874303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 3681068 - 3681130
Alignment:
Q  9 tgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  || ||||||||| |||||    
T  3681068 tgcgacgttgtttgtctttcttgtttctttctggtatttgttcggtttagattgtcatatcag 3681130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 32778857 - 32778747
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||| | |||||||||  || |||| |||||||||  ||||||||||||||| ||||||||||||| ||| | | |   |||||||| ||||    
T  32778857 atcaatgacttttgcgtcgtcaactttgcagatctggagacatgagtattctggagacttgaatatagtcatatttgtagccataggtactttgccgttt 32778758  T
Q  197 tatgctattaa 207  Q
    |||||||||||    
T  32778757 tatgctattaa 32778747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5989767 - 5989832
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcag 66  Q
    |||||||||||| ||||||||||||||||| ||||| ||| |||||| |||  |||||||||||||    
T  5989767 cgtctttgtgcggcgttgtttgtctttcttatttcgctcaagtatttcttcggttcagattgtcag 5989832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 5989894 - 5989955
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| ||||||||||||||||| ||||||  |||||||  ||||||||||||||||||    
T  5989894 ggagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacat 5989955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 32061931 - 32062142
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||||||    | | |||||||| |||||||  ||||||||||||||||| ||||||||| ||   |||| ||| || ||    
T  32061931 cgtctttgtgcgacattgtttgtcttttccctcttgttcaggtgtttgttcggttcagattgtcagatca-gcttcgatcaag---tgcagatccaacca 32062026  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |||||| || ||||  |||| ||| | |||||   ||| || ||||||||||||| |||  ||||    ||||||  ||||||||    
T  32062027 atgactttggcgtcatcaacgttgcagatccggaggcatggctattccaaagattttaatatagtcatatttgtatgcttatgcactttgtcgttttatg 32062126  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  32062127 ctattaacatggatgt 32062142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 38546039 - 38545930
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctatt 205  Q
    ||||| |||||||||| || ||||  ||||||||| |||||| |||||||| ||||||||||| |  || ||| |  ||||||||| ||||||||||||     
T  38546039 tttggcgtcgtcaacgttgcagatccggagacataagtattccggagacttgaatatagtcatgttagtaggcatagatactttgccgttttatgctatg 38545940  T
Q  206 aacattgatg 215  Q
    ||||| ||||    
T  38545939 aacatggatg 38545930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 217
Target Start/End: Original strand, 3028281 - 3028365
Alignment:
Q  133 gagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgtc 217  Q
    |||||||  ||||||||||||||| ||||||||||||||||| | ||||  |||||||   ||||||| ||||||||| ||||||    
T  3028281 gagacatgagtattctggagacttgaatatagtcatatgtgtagacttttgtactttgtcattttatgttattaacatggatgtc 3028365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 18197108 - 18196918
Alignment:
Q  16 ttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcg 115  Q
    ||||||||||| || || | |||||||| ||||||||||||| ||| || |||| || ||||||| |||   ||| ||| || |||| ||||||  ||||    
T  18197108 ttgtttgtcttcctcgtcttgttcaggtgtttgttcaattcaaattttcggatc-ggtttcgatctagt---gcagatccaaccaatgactttgacgtcg 18197013  T
Q  116 tcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||| || ||||  |||||||| | |||||   |||||| ||||||||||||| ||| | |||   |||||||| ||||||||| ||||||||    
T  18197012 tcaacgttgcagatccggagacatcgctattccaaagactttaatatagtcatatttgtagtcttctgtactttgccgttttatgcgattaacat 18196918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 26582851 - 26582796
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||||| ||||||||||||||| | ||||||||| |||||||||||||||||||    
T  26582851 gttgtttgt-tttcttgtttcgttcggatatttgttcgattcagattgtcagatcag 26582796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14327616 - 14327698
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    |||||||||||||||||||||||||||    ||| ||||| || |||||||  ||||||||||||||||| |||||||| ||||    
T  14327616 cgtctttgtgcgacgttgtttgtcttttcccttttgttcaagtgtttgttcggttcagattgtcagatca-gcttcgatacagt 14327698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 174
Target Start/End: Complemental strand, 14919354 - 14919198
Alignment:
Q  14 cgttgtttgtctttcttgtttcgttcaggtat-ttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggag 112  Q
    |||||||||||||| |||||||||||||| || || ||  ||||||||||||||||||  ||| |||||||   |||||||  ||| ||| |||||||      
T  14919354 cgttgtttgtcttttttgtttcgttcaggaatattatttgattcagattgtcagatca-actttgatccag---tgcaaattcaattaatgactttggca 14919259  T
Q  113 tcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    ||||||||| |||| |   ||||||||| ||||||||  || || |||||||||||||||||    
T  14919258 tcgtcaacgttgaaaacccggagacata-gtattctgatgatttgaatatagtcatatgtgt 14919198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 16809137 - 16809204
Alignment:
Q  142 gtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaaca 209  Q
    |||||| |||||||| ||||||||||||||||| |||||   ||||||| ||||||||| ||||||||    
T  16809137 gtattccggagacttgaatatagtcatatgtgtaggcttctgtactttgttgttttatgttattaaca 16809204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 16938163 - 16938044
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtca-----tatgtgttggctttaatactttg 190  Q
    ||||||| ||||| | |||||||||| || ||||  ||||| || ||||||| | |||||||||||||||||     ||||||| ||||||  |||||||    
T  16938163 aatcaatgacttttgtgtcgtcaacgttgcagatccggagatatgggtattccgaagacttaaatatagtcaagtcatatgtgtaggcttttgtactttg 16938064  T
Q  191 ctgttttatgctattaacat 210  Q
     ||||||||| |||||||||    
T  16938063 ttgttttatggtattaacat 16938044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 17019381 - 17019448
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||| || |||||||||||||| || |||  ||||||||| ||||||||||||||||| |||||    
T  17019381 ggagacttgaagatagtcatatgtgtaggattttgtactttgctattttatgctattaacatggatgt 17019448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 17549818 - 17549885
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||| || |||||||||||||| || |||  ||||||||| ||||||||||||||||| |||||    
T  17549818 ggagacttgaagatagtcatatgtgtaggattttgtactttgctattttatgctattaacatggatgt 17549885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 283838 - 283777
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| ||||||||||||||||| ||||||  |||||| |  |||||||||||||||||    
T  283838 ggagacttgaatatagtcatatgtgtaggcttttttacttttccattttatgctattaacat 283777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 632039 - 632100
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| ||||||||||||||||| ||||||  |||||| |  |||||||||||||||||    
T  632039 ggagacttgaatatagtcatatgtgtaggcttttttacttttccattttatgctattaacat 632100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 817851 - 817912
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||| ||||||||||||||||| ||||||  |||||| |  |||||||||||||||||    
T  817851 ggagacttgaatatagtcatatgtgtaggcttttttacttttccattttatgctattaacat 817912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 7281104 - 7280895
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| || |||||||||||  ||||||| | |||||||||||||  || ||||||||| ||| | |||||| |||||   ||| ||  ||||     
T  7281104 cgtctttgtgcaacattgtttgtcttatttgtttcatgcaggtatttgttcggtttagattgtcatatccg-cttcga-ccagt---gcagattcaatct 7281010  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  |||||| ||| || |||| | ||||||| ||||||| ||| |||| |||||||||||||  ||  | |||  ||||||| |||||||||    
T  7281009 atgactttgc-gtcgtccacgttgcagatctagagacatgggtattccggatacttgaatatagtcatataagtatgtttttgtactttgttgttttatg 7280911  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  7280910 atattaacatggatgt 7280895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7269441 - 7269377
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtca 65  Q
    ||||||||||| || |||||||||||||||||||| | || ||||||||||  || |||||||||    
T  7269441 cgtctttgtgcaacattgtttgtctttcttgtttcatgcaagtatttgttcggtttagattgtca 7269377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 31874361 - 31874428
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| |||||||||||||||||||| |||  |  |||||||  |||||||||||||||||| |||||    
T  31874361 ggagatttaaatatagtcatatgtgtaggcaattgtactttgtcgttttatgctattaacatggatgt 31874428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 14530755 - 14530682
Alignment:
Q  143 tattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||| ||||| || ||||||||||||| | | |||||   |||||||| |||||||||||||||||| |||||    
T  14530755 tattccggagattttaatatagtcatatttataggcttgtgtactttgccgttttatgctattaacatggatgt 14530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 16809014 - 16809051
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttc 39  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  16809014 gtctttgtgcggcgttgtttgtctttcttgttttgttc 16809051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 27534236 - 27534184
Alignment:
Q  158 aatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    ||||||||||||| ||| |||||   |||||||| ||||||||||||||||||    
T  27534236 aatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacat 27534184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15673945 - 15673734
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||||  |   |||||||||    
T  15673945 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcag-cttcgatccagtatag---atcaaatca 15673850  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||| | || |||| ||||||||| | ||||| |||||||||||||||||||||||||| ||||||| || ||||| ||||||||    
T  15673849 atgactttggagtcgtcaatgttgcagatctggagacatggatattccggagacttaaatatagtcatatgtgtaggctttagtattttgccgttttatg 15673750  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  15673749 ctattaacatggatgt 15673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 19580979 - 19580768
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||   ||| |||||||||    
T  19580979 cgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagattgtcagatcag-cttcgatccagt---gcatatcaaatca 19580884  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||| ||||||| || ||||  |||||||| | ||||| ||||||||||||||| |||||| ||| | ||||| |||||||| ||||||||    
T  19580883 atgactttggagttgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatctgtagactttagtactttgcagttttatg 19580784  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  19580783 ctattaacatggatgt 19580768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 10589232 - 10589442
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||| ||||||||||| ||| ||||||||   ||| |||||||||    
T  10589232 cgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcagatcag-ctttgatccagt---gcagatcaaatca 10589327  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||| || ||||  |||||||  ||||||| | |||||||||||||||||||||| | |||||||||||||||| ||||||||    
T  10589328 atgactttggagtcatcaacgttgcagatccggagacaagggtattccgaagacttaaatatagtcatatgtataggctttaatactttgccgttttatg 10589427  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  10589428 ctattaacatggatg 10589442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 37883790 - 37884000
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||| ||| |||||| |   ||| |||||||||    
T  37883790 cgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcag-ctttgatccaat---gcagatcaaatca 37883885  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||  ||||||||  ||||||| || |||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  37883886 atgactttggagtcgtcaacgttgcagatacggagacatgagtattctagatacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 37883985  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  37883986 ctattaacatggatg 37884000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 26491439 - 26491643
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||   ||| |||||||||    
T  26491439 cgtctttgtgtgacgttgtttgtgtttcttgtttcgttcag-tatttgttcgattcagattgtcagatcag-cttcgatctagt---gcagatcaaatca 26491533  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || ||||  |||||||| || |||| |||||||||||||||||||||||||| ||||||| |||||||  || ||||     
T  26491534 atgactttggagtcgtcaacgttgcagatccggagacatgggcattccggagacttaaatatagtcatatgtgtaggctttagtactttgtcgtgttata 26491633  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  26491634 ctattaacat 26491643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4878713 - 4878503
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||  |||||||||||| ||||| ||||||||||||   ||| |||||||||    
T  4878713 cgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcag-cttcgatccagt---gcagatcaaatca 4878618  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||| || |||| | || |||| |||||||||  |||||| || ||||||||||||||||||||||| ||||||| |||||  | ||||||||    
T  4878617 atgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgtaggctttagtacttgaccgttttatg 4878518  T
Q  201 ctattaacattgatg 215  Q
     ||||||||| ||||    
T  4878517 ttattaacatggatg 4878503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 7443543 - 7443339
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||| ||||||| |||| |||||||   ||| |||||||||    
T  7443543 cgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtaagatcag-cttcaatccagt---gcagatcaaatca 7443448  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||| || ||||  ||||| |  ||||||| ||| ||||||||||| |||||||||| ||||||| |||||| | ||||||||    
T  7443447 atgactttggagtcatcaacgttgcagatccggagataagggtattccggaaacttaaatataatcatatgtgtaggctttagtactttacagttttatg 7443348  T
Q  201 ctattaaca 209  Q
    |||||||||    
T  7443347 ctattaaca 7443339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 7640333 - 7640122
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  7640333 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 7640238  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  7640237 atgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 7640138  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  7640137 ctattaacatggatgt 7640122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27024116 - 27023906
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  27024116 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcaattcagattgtcagatca-gcttcgatccag---tgcagatccaatca 27024021  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| |||  |  ||||||||  |||||||    
T  27024020 atgactttggagtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtgggcaattgtactttgccattttatg 27023921  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  27023920 ctattaacatggatg 27023906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29734327 - 29734539
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||| |||| |||||||||||||| |||| |||||||||| | |||||||| ||||||||||||||||||  ||||||||||||   ||| |||||||||    
T  29734327 cgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagattgtcagatcaa-cttcgatccagt---gcagatcaaatca 29734422  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaa--atatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    || |||||||||||||||||| |||||||  ||||||||  |||||| ||||||||||  |||||||||||||  | | ||||| |||||||| ||||||    
T  29734423 atgactttggagtcgtcaacgttgaagatccggagacatgagtattccggagacttaaatatatagtcatatggctagactttagtactttgccgtttta 29734522  T
Q  199 tgctattaacattgatg 215  Q
    | |||||||||| ||||    
T  29734523 tactattaacatggatg 29734539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 36508067 - 36508277
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||| ||||||||||||   |||| ||| ||||||    
T  36508067 gtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattgtcagatca-gcttcgatccag---tgcagatccaatcaa 36508162  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    | ||||||| ||| || ||| || ||||  ||| |||| | |||||  |||| |||||||||||||||||||| ||| ||  |||||||| |||||||||    
T  36508163 tgactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgc 36508262  T
Q  202 tattaacattgatgt 216  Q
    ||||||||| |||||    
T  36508263 tattaacatggatgt 36508277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 43567010 - 43567221
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||  ||  |||||||||||||||||| ||||||||||||   ||| ||| |||||    
T  43567010 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattgtcagatcag-cttcgatccagt---gcagatccaatca 43567105  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  43567106 atgactttggtgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 43567205  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  43567206 ctattaacatggatgt 43567221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 25516629 - 25516840
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| |||||||| |||||||||||  ||||||||||| ||  |||||||||||||||||| |||| |||||||   ||| ||| |||||    
T  25516629 cgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcag-cttcaatccagt---gcagatccaatca 25516724  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  25516725 atgactttggcgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 25516824  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  25516825 ctattaacatggatgt 25516840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 20036532 - 20036730
Alignment:
Q  14 cgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagt 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||   |||| ||| ||||||| ||||||| |     
T  20036532 cgttgtttgtctttcttgtttcgttcaggtatttgttcagttcagattgtcagat-tggcttcgatccag---tgcagatccaatcaatgactttggcgc 20036627  T
Q  114 cgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattga 213  Q
    |||||||| || ||||  | |||||| ||||||| | ||||||  ||||||||  |||||| |||||   |||||| | |||||||||||||||||| ||    
T  20036628 cgtcaacgttgcagatccgaagacatgggtattccgtagacttggatatagtctaatgtgtaggcttctgtactttaccgttttatgctattaacatgga 20036727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 41176995 - 41177206
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||| ||  |||| ||||||||||||| ||||||||||||   ||| ||| |||||    
T  41176995 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcaaattgtcagatcag-cttcgatccagt---gcagatccaatca 41177090  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||| | | |||| | ||||| ||||| ||||||||| |||||||||| ||| ||  |||||||| ||||||||    
T  41177091 atgactttggcgtcatccacgttgcagattcgaaaacatggttattccggagatttaaatatattcatatgtgtaggcatttgtactttgccgttttatg 41177190  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  41177191 ctattaacatggatgt 41177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 25771582 - 25771792
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| |||||||||| |||||| ||||||||||||   || | ||| |||||    
T  25771582 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatca-gcttcgatccag---tgtagatccaatca 25771677  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| ||| || ||| || |||| |||| |||| | ||||| ||||| |||||||||||||||||||| | |  |  |||||||| ||||||||    
T  25771678 atgattttggcgtcatccacgttgcagatctggatacatggttattccggagatttaaatatagtcatatgtgtagacaattgtactttgccgttttatg 25771777  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  25771778 ctattaacatggatg 25771792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13268709 - 13268920
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||||||| | |||||||  |||||||| ||| ||||||||||||||||||  ||| |||||   | |||| ||| |||||    
T  13268709 cgtctttgtgcgacgttgtttgtctttttcgtttcgtctaggtatttattcgattcagattgtcagatca-actttgatcc---aatgcatatccaatca 13268804  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |  ||||||| ||| |||||| |||||||  || |||||  ||||||  ||||||| |||||||||| ||||||  |||||  |||||||||||||||||    
T  13268805 acgactttggcgtcttcaacgttgaagatccggggacatgagtattccagagacttgaatatagtcacatgtgtaagcttttgtactttgctgttttatg 13268904  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  13268905 atattaacatggatgt 13268920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 43929277 - 43929066
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  |||||||||| |||||| | ||||||| ||   |||| ||  |||||    
T  43929277 cgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttgatcggttcagattgttagatca-gtttcgatcaag---tgcagattcaatca 43929182  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||||||||   ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||| ||||||||    
T  43929181 atgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgccgttttatg 43929082  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  43929081 ctattaacatggatgt 43929066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 44167688 - 44167478
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||| ||  |||| |||||||||||| ||||| ||||||   |||| ||| |||||    
T  44167688 cgtctttgtgcgacgttgtttgtttttcttgtttcgctcagctatttgatcgcttcaaattgtcagatca-gcttcaatccag---tgcagatccaatca 44167593  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || ||||  ||| |||| | |||||  |||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  44167592 atgactttgacgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 44167493  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  44167492 ctattaacatggatg 44167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 2251322 - 2251112
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||    ||  ||| |||| ||||||||||||||||||||||||||| ||||||||||||   ||||||| || ||    
T  2251322 cgtctttgtgcgacgttgtttgtcttttccctt--gttgaggtgtttgttcaattcagattgtcagatcag-cttcgatccagt---gcaaatccaacca 2251229  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |||||| || ||||  | || ||| | ||||| ||||| || ||||||||||||| ||| |||||   |||||||| ||||||||    
T  2251228 atgactttggcgtcatcaacgttgcagatccgaaggcatggttattccggagattttaatatagtcatatttgtaggcttatgtactttgcagttttatg 2251129  T
Q  201 ctattaacattgatgtc 217  Q
    |||||||||| ||||||    
T  2251128 ctattaacatggatgtc 2251112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27191314 - 27191100
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   || | ||| |||||    
T  27191314 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgatccag---tgtagatccaatca 27191219  T
Q  101 ataactttggagtcgtcaacgatgaagatttggaga----cataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    || ||||||| ||| || ||| || |||| |||| |    ||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||| | ||||    
T  27191218 atgactttggcgtcatccacgttgcagatctggaaacatgcatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttaccgttt 27191119  T
Q  197 tatgctattaacattgatg 215  Q
    |||||||||||||| ||||    
T  27191118 tatgctattaacatggatg 27191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27841128 - 27840914
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   || | ||| |||||    
T  27841128 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgatccag---tgtagatccaatca 27841033  T
Q  101 ataactttggagtcgtcaacgatgaagatttggaga----cataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    || ||||||| ||| || ||| || |||| |||| |    ||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||| | ||||    
T  27841032 atgactttggcgtcatccacgttgcagatctggaaacatgcatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttaccgttt 27840933  T
Q  197 tatgctattaacattgatg 215  Q
    |||||||||||||| ||||    
T  27840932 tatgctattaacatggatg 27840914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 25623022 - 25622810
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttc-ttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatc 99  Q
    |||||||||||| ||||||||||||||| ||||||   |||||||||| |||  |||||||||||| ||||| ||| ||| ||||   ||| ||  ||||    
T  25623022 cgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagattgtcatatcag-cttagattcagt---gcagattcaatc 25622927  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    ||| ||||||  |||||||||| |  ||||| | ||||||  |||||| |||||||| ||||||||||||||||| ||||||  |||||||  |||||||    
T  25622926 aatgactttgacgtcgtcaacgttacagattcgaagacatgagtattccggagactttaatatagtcatatgtgtaggcttttgtactttgacgttttat 25622827  T
Q  200 gctattaacattgatgt 216  Q
    ||||||||||| |||||    
T  25622826 gctattaacatggatgt 25622810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 3465066 - 3465277
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  3465066 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 3465161  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| ||| || ||| || ||||   || |||| | ||||  ||||| |||||||||||||||||||| | | ||  |||||||  ||||||||    
T  3465162 atgattttggcgtcatccacgttgcagatccagaaacatggttatttcggagatttaaatatagtcatatgtgtagacatttgtactttgtcgttttatg 3465261  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  3465262 ctattaacatggatgt 3465277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 25237303 - 25237097
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||     || |||||||| ||||||||||| |||||| ||| ||||||| ||||| ||||||   |||| ||  |||||    
T  25237303 cgtctttgtgcgacattgtttgt-----ttttttcgttcgggtatttgttcgattcaggttgccagatca-gcttcaatccag---tgcagattcaatca 25237213  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||| |||||||||||| || | ||| ||||||||  |||||| || |||||||||||| |||||||||| ||||||  || ||||| ||||||||    
T  25237212 atgacttttgagtcgtcaacgttgcaaattcggagacatgagtattcgggggacttaaatataatcatatgtgtaggcttttctattttgccgttttatg 25237113  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  25237112 ttattaacatggatgt 25237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 40125526 - 40125732
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||   ||||| | |     |||||||||    
T  40125526 cgtctttgtgcgacgttctttgtctttcttgtttcgttcaggtatttattcgattcagattgtcagatca-gctctaatccaatgc-----atcaaatca 40125619  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||| |||||||| ||  || ||||  | |||||| | ||||    | |||||||||||||||||||||| ||||||| |||||||| ||||  ||    
T  40125620 atgattttagagtcgtcgacattgcagatccgaagacatggatatttcatacacttaaatatagtcatatgtgtaggctttagtactttgccgttt--tg 40125717  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  40125718 ctattaacatggatg 40125732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 6090029 - 6090237
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    ||||||||||||||||||||| |||||||||||  |||| |||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||||    
T  6090029 tctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcgcttcagattgtcagatca-gcttcgatccag---tgcatatccaatcaat 6090124  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||| | ||| || ||| || ||||  ||| |||| | |||||  |||| |||||||||||||| |||||  || ||  |||||||| ||||||||||    
T  6090125 gactttagtgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcat-tgtgtatgcatttgtactttgccgttttatgct 6090223  T
Q  203 attaacattgatgt 216  Q
    |||| ||| |||||    
T  6090224 attagcatggatgt 6090237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24500624 - 24500706
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||| |||||||| |||||||||||||    
T  24500624 cgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagattatcagatca-gcttcgatccagt 24500706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 38822209 - 38822414
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||| |||||   ||||||||||||   |||| ||| |||||    
T  38822209 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgccagat-ttgcttcgatccag---tgcagatccaatca 38822304  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || | | || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| |||| |||    
T  38822305 atgactttgacgtcatccatgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgtttcatg 38822404  T
Q  201 ctattaacat 210  Q
     |||||||||    
T  38822405 ttattaacat 38822414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 42105727 - 42105576
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtc 114  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||| ||||||| |||| |||||||| |||   |||| ||||||||||| ||||||||||     
T  42105727 gttgtttgt-tttgttgtttcgttcaggtatttgttcgattcaaattgtcaaatca-gcttcgattcag---tgcagatcaaatcaatgactttggagtt 42105633  T
Q  115 gtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgt 172  Q
    ||||||| || ||| | | |||||| | ||||| ||||||||||||||| ||||||||    
T  42105632 gtcaacgttgcaga-tcgaagacatggttattccggagacttaaatataatcatatgt 42105576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 5930564 - 5930771
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    ||||||||||||||||||| |||||||||||  ||| ||||||| ||  |||||||||| |||||| ||||||||||||   |||| ||| ||||||| |    
T  5930564 tttgtgcgacgttgtttgtttttcttgtttctatcatgtatttgatcggttcagattgtgagatca-gcttcgatccag---tgcagatccaatcaatga 5930659  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
     ||||| ||  || ||| || ||||  |||||||| | ||||| ||||| |||||||| ||||||||||| ||| ||  || ||||  ||||||||||||    
T  5930660 ttttggtgttatccacgttgcagatccggagacatggttattccggagatttaaatatggtcatatgtgtaggcatttgtattttgtcgttttatgctat 5930759  T
Q  205 taacattgatgt 216  Q
    ||| || |||||    
T  5930760 taatatggatgt 5930771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 12366060 - 12366216
Alignment:
Q  56 cagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagact 155  Q
    |||||||||| ||||| ||||||| ||||   ||||||||| ||||| |||||||||||  ||| | || ||||  ||||||||  |||||| || ||||    
T  12366060 cagattgtcaaatcag-cttcgatgcagt---gcaaatcaattcaatgactttggagtcaccaatgttgcagatccggagacatgagtattccggtgact 12366155  T
Q  156 taaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||| ||||||||||| ||||||| ||||||   |||||||||||||||||| |||||    
T  12366156 taaatattgtcatatgtgtaggctttagtactttttcgttttatgctattaacatggatgt 12366216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19953707 - 19953776
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||    
T  19953707 cgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagattgtcagatca 19953776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 3390588 - 3390770
Alignment:
Q  29 ttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaaga 128  Q
    |||||||  ||||||||||| ||| ||||||||||||||| || ||||||||||||   ||| ||| ||||||| ||||||| ||| || ||| || |||    
T  3390588 ttgtttctctcaggtatttgatcagttcagattgtcagataag-cttcgatccagt---gcagatccaatcaatgactttggcgtcatccacgttgcaga 3390683  T
Q  129 tttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    |  ||| |||| | ||||| ||||| ||||||||||  |||||||| |||  |  |||||||| |||||||||||||||||| ||||    
T  3390684 tccggatacatggttattccggagatttaaatatagctatatgtgtaggcaattgtactttgccgttttatgctattaacatggatg 3390770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 28228361 - 28228559
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    ||||||||||   ||||||||||||||||||||||||| ||||||||||  |||||||||||| ||||| ||| |||||| |   ||| ||| |||||||    
T  28228361 tctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcatatcag-ctttgatccaat---gcagatccaatcaat 28228456  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| |||| | ||| || ||||  | ||||||  |||||   ||| ||| ||||||||||||||||| ||||||  |||||||  || |||||||    
T  28228457 gactttggcgtcgcccacgttgtagatccgaagacatgagtatttcagaggcttgaatatagtcatatgtgtaggcttttttactttgtcgtattatgct 28228556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16879942 - 16879860
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  |||||||||||||||||  ||||||||||||    
T  16879942 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-acttcgatccagt 16879860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16992075 - 16991993
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  |||||||||||||||||  ||||||||||||    
T  16992075 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-acttcgatccagt 16991993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44951556 - 44951638
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| |||||||||||||    
T  44951556 cgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccagt 44951638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11550573 - 11550507
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcaga 67  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  11550573 cgtctttgtgcggcgttttttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcaga 11550507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 18141367 - 18141253
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtt 195  Q
    ||||||| ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| |||    
T  18141367 aatcaatgactttggcgtcctccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgtt 18141268  T
Q  196 ttatgctattaacat 210  Q
    |||||||||||||||    
T  18141267 ttatgctattaacat 18141253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 9715519 - 9715317
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||   |||| ||||||| |||| | ||| ||||||   |||| ||| |||||||    
T  9715519 tctttgtgcggcattgtttgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcatatca-gattcaatccag---tgcatatccaatcaat 9715424  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| ||  || ||| || | ||   ||||||||| ||||| | |||||| |||||||||| | |||| ||||||  |||||||  ||| |||| |    
T  9715423 gactttggcgttctccacgttgtaaatccagagacatagatattccgcagacttgaatatagtcaaacgtgtaggcttttgtactttgtcgttatatgtt 9715324  T
Q  203 attaaca 209  Q
    |||||||    
T  9715323 attaaca 9715317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16720825 - 16720615
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| |||||||||||| ||||||||| | |||||||||||||||  |||||||| ||| ||||| ||| ||||  ||   ||| ||| |||||    
T  16720825 cgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgttcggttcagattatcaaatcag-ctttgatctcgt---gcagatccaatca 16720730  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |  | |||||  || || ||| || ||||   || ||||   |||||||||||||||||||||||||||||||| ||| ||  |||||||   |||||||    
T  16720729 acgattttggcttcatccacgttgcagatccagatacatgattattctggagacttaaatatagtcatatgtgtaggcatttgtactttgtcattttatg 16720630  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  16720629 ctattaacatggatg 16720615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 3603251 - 3603333
Alignment:
Q  134 agacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| |||||||||||||||||| |||||    
T  3603251 agacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgt 3603333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 44441644 - 44441726
Alignment:
Q  133 gagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    ||||||| ||||||| |||||||| ||||||||||||||||| | ||||  |||||||| |||||| ||||||||||| ||||    
T  44441644 gagacattggtattccggagacttgaatatagtcatatgtgtggacttttgtactttgccgttttaagctattaacatggatg 44441726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 210
Target Start/End: Complemental strand, 3397954 - 3397751
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||||| |||||| |||||    | | |||||||| ||||||||||||||||||||||||||  ||||||||||||   ||| ||  || ||||    
T  3397954 tctttgtgcgactttgtttatcttttccctcttgttcaggtgtttgttcaattcagattgtcagatcat-cttcgatccagt---gcagattcaaccaat 3397859  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| ||| |||||  || ||||  |||||||| | ||||  ||||| || ||||||||||||| |||  ||||   |||||||  ||||||||||    
T  3397858 gactttggcgtcatcaacattgcagatccggagacatggctatttcggagattttaatatagtcatatttgtatgcttatgtactttgtcgttttatgct 3397759  T
Q  203 attaacat 210  Q
    ||||||||    
T  3397758 attaacat 3397751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 4732307 - 4732424
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||| | |||||||||| || ||||  ||||||||  |||||| |||||||| ||||||||||||| ||| ||| | |||  |||| |||||||    
T  4732307 caatgactttagcgtcgtcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggcataaattttttgttgtttta 4732406  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  4732407 tgctattaacatggatgt 4732424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 11798415 - 11798295
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagattt-ggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtt 195  Q
    |||||| ||||| | |||||||||| || |||||| ||||||||  ||||| ||||||||| ||||||||||||| ||| ||| |   |||||||  |||    
T  11798415 atcaatgacttttgcgtcgtcaacgttgcagatttcggagacatgagtattatggagacttgaatatagtcatatttgtaggcataggtactttgtcgtt 11798316  T
Q  196 ttatgctattaacattgatgt 216  Q
    ||||||||||||||| |||||    
T  11798315 ttatgctattaacatggatgt 11798295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 29812592 - 29812430
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||  ||||||| ||||||||||||| ||||||||| |||||  ||| |||||| | |||| | || |||||||   |||| ||| |||||    
T  29812592 cgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggattgttatatca-gtttagatccag---tgcagatccaatca 29812497  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtca 167  Q
    || | |||||| ||||||||| || ||||  | |||||| |||||||  ||||| ||||||||||||    
T  29812496 atgattttggaatcgtcaacgttgcagatccgaagacatgggtattccagagacataaatatagtca 29812430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 11931157 - 11931220
Alignment:
Q  153 acttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||| ||||||||||||||||| ||||||  |||||||| |||||||||||||||||| |||||    
T  11931157 acttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgctattaacatggatgt 11931220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 15920103 - 15920222
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||||| |||||||||| || ||||  ||| ||||  |||||  | |||||| ||||||||||||| ||| ||| |   |||||||| ||||    
T  15920103 atcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgtactttgccgttt 15920202  T
Q  197 tatgctattaacattgatgt 216  Q
    ||||||||||||||||||||    
T  15920203 tatgctattaacattgatgt 15920222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 17118790 - 17118586
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||  ||||||||||||| ||||||||||  ||||||| |||  || |||||||||||||| ||||| |||   || |||| |||||| ||    
T  17118790 cgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattc-ctttagattgtcagatca-gcttcaatc---tagtgcagatcaaaaca 17118696  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||  || ||||||| || | ||| | |||||| ||||||   ||  ||| ||||||||||||||||| ||| ||  |||||||  ||||||||    
T  17118695 atgattttgacgttgtcaacgttgcatattcgtagacatgggtatttcagaagcttgaatatagtcatatgtgtaggcgtttgtactttgtcgttttatg 17118596  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  17118595 ctattaacat 17118586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 4604176 - 4604080
Alignment:
Q  113 tcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    ||||||||| || |||| | ||||||||| |||||| ||||||| ||||||||||||| ||| ||| |  ||| ||||| ||||||||||||||||||    
T  4604176 tcgtcaacgttgcagatctagagacatag-tattctagagacttgaatatagtcatatttgtaggcatagatattttgccgttttatgctattaacat 4604080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5071347 - 5071136
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||| ||||||||||||  | | | |||||||| |||||||  |||||||||||||||||  ||||||||   || || | ||| || |     
T  5071347 cgtctttgtgcgactttgtttgtcttttctctcttgttcaggtgtttgttcggttcagattgtcagatca-acttcgatc---tagtgtagatccaaccg 5071252  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| |||||| || ||||  |||| ||| | ||||| ||| | || ||||||||||||| ||| |||||   || | ||| ||||||||    
T  5071251 atgactttggcgtcatcaacgttgcagatccggaggcatggctattccggatattttaatatagtcatatttgtaggcttatgtattatgccgttttatg 5071152  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  5071151 ctattaacatggatgt 5071136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 17068892 - 17068688
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||  ||||||||||||| ||||||||||  ||||||| |||  || | ||||| ||||||| |||| |||||||   ||| |||||| ||    
T  17068892 cgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaa-attgttagatcag-cttcaatccagt---gcagatcaaaaca 17068798  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||  |||||| ||| || | ||  | |||||| ||||||   ||  ||| ||||||||||||||||| | ||||  |||||||| ||||||||    
T  17068797 atgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactttgccgttttatg 17068698  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  17068697 ctattaacat 17068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 210
Target Start/End: Complemental strand, 17056444 - 17056241
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||||||||  ||||||||||||| ||||||||||  ||||||| |||  || | ||||| ||||||| |||| |||||||   ||| |||||| |||    
T  17056444 gtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtatttattcctttaa-attgttagatcag-cttcaatccagt---gcagatcaaaacaa 17056350  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgc 201  Q
    | | ||||  |||||| ||| || | ||  | |||||| ||||||   ||  ||| ||||||||||||||||| | ||||  |||||||| |||||||||    
T  17056349 tgattttgacgtcgtcgacgttgcatatccgtagacatgggtatttcagaagcttgaatatagtcatatgtgtagacttttgtactttgccgttttatgc 17056250  T
Q  202 tattaacat 210  Q
    |||||||||    
T  17056249 tattaacat 17056241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 216
Target Start/End: Original strand, 32015562 - 32015616
Alignment:
Q  162 tagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||| ||| ||| | ||||||||||||||||||||||||||||| |||||    
T  32015562 tagtcatatttgtaggcataaatactttgctgttttatgctattaacatggatgt 32015616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 216
Target Start/End: Original strand, 35353812 - 35353988
Alignment:
Q  36 gttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggag 135  Q
    |||||||| ||||||||  | ||||||||||||||  ||||||||||||   ||| ||| || |||| ||||||| ||| |||||| || ||||  ||||    
T  35353812 gttcaggtgtttgttcagattagattgtcagatcat-cttcgatccagt---gcagatccaaccaatgactttggcgtcatcaacgttgcagatccggag 35353907  T
Q  136 acataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
     |||   ||||  ||||| || ||||||||||||| | | |||||   ||||||| ||||||||||||||||||| |||||    
T  35353908 gcatgactatttcggagattttaatatagtcatatttataggcttatgtactttgttgttttatgctattaacatggatgt 35353988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 5754517 - 5754590
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||||| ||||||| |||||||||| || ||||  ||||||||| |||||| |||||| | |||||||||||||    
T  5754517 atcaatgactttggtgtcgtcaacgttgcagatccggagacataagtattccggagacatgaatatagtcatat 5754590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 17095310 - 17095258
Alignment:
Q  158 aatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    ||||||||||||||||| | ||||  |||||||| ||||||||||||||||||    
T  17095310 aatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacat 17095258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 34480229 - 34480313
Alignment:
Q  132 ggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||  |||||| || ||||| ||||||||||||||||| || |||  |||||||  ||||||| |||||||||| |||||    
T  34480229 ggagacatgagtattccggcgacttgaatatagtcatatgtgtaggtttttgtactttgtcgttttattctattaacatggatgt 34480313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44441519 - 44441583
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtca 65  Q
    |||||| || || |||||||||||||  ||||||||||||| ||||||||| ||| |||||||||    
T  44441519 cgtcttcgtacggcgttgtttgtcttatttgtttcgttcagatatttgttcgatttagattgtca 44441583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 7072799 - 7072732
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||| | ||||||||||||| ||| ||| |  ||||||||| |||||||||||||||||| |||||    
T  7072799 ggagacatgaatatagtcatatttgtaggcatatatactttgccgttttatgctattaacatggatgt 7072732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 8027887 - 8027776
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||||||||||| |||||||| | |  |||| || ||||||  ||||||  || ||||||||||| |||||| ||| ||| |  ||||| ||| ||||||    
T  8027887 caataactttggtgtcgtcaatgttacagatctgaagacatgagtattcgagatacttaaatataatcatatttgtaggcatagatactatgccgtttta 8027788  T
Q  199 tgctattaacat 210  Q
    ||||||||||||    
T  8027787 tgctattaacat 8027776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 12704924 - 12704995
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| ||||||| |||||||||| || ||||| ||||||||  ||||||||||||| | |||||| ||||||    
T  12704924 caatgactttggcgtcgtcaacgctgcagattcggagacatgagtattctggagacatgaatataatcatat 12704995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 6431294 - 6431184
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||| | |||||||| | || |||| || ||||||  |||||| |||||||||||||||||||||| |||  || |   |||||||| ||||    
T  6431294 atcaatgacttttgcgtcgtcaatgttgcagatctgaagacatgagtattccggagacttaaatatagtcatatttgtatgcatatgtactttgccgttt 6431195  T
Q  197 tatgctattaa 207  Q
    ||||| |||||    
T  6431194 tatgcgattaa 6431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 25068087 - 25068203
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  |||||||   | |||| | |||||| ||||||||||||| ||| ||| |   ||| |||| ||||||    
T  25068087 caatgactttggcgtcgtcaacgttgcagatccggagacaagaggattccgaagacttgaatatagtcatatttgtaggcataggtaccttgccgtttta 25068186  T
Q  199 tgctattaacattgatg 215  Q
    ||||||||||| |||||    
T  25068187 tgctattaacactgatg 25068203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 38384341 - 38384225
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||||||||||| ||| |||||  || ||||  ||||||||  | |||| |||||||||||||||||||||| | | ||| |   ||| |||| ||||||    
T  38384341 caataactttggcgtcatcaacattgcagatccggagacatgaggattccggagacttaaatatagtcatatttataggcataggtaccttgccgtttta 38384242  T
Q  199 tgctattaacattgatg 215  Q
     ||||||||||| ||||    
T  38384241 ggctattaacatggatg 38384225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 45041095 - 45041163
Alignment:
Q  142 gtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||||||| | || |||||||| |||| ||| |||||  ||| ||||||| ||||||||||||||||    
T  45041095 gtattctggatagttcaatatagttatatttgtaggcttgtatattttgctggtttatgctattaacat 45041163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 9e-60; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 913293 - 913083
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| |||  |||||||||||  |||||||||||||||||| ||||||||||||   ||| |||||||||    
T  913293 cgtctttgtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcag-cttcgatccagt---gcagatcaaatca 913198  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||| || ||||  ||||||| |||||||  |||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  913197 atgactttggagtcatcaacgttgcagatccggagacaaaggtatttcggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 913098  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  913097 ctattaacatggatg 913083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 40797170 - 40797380
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||| |||   ||| |||||||||    
T  40797170 cgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagattgtcagatcag-cttcgatctagt---gcagatcaaatca 40797265  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| |||||  || ||||  |||||||  ||||||| |||||||||||||||||||||||||| ||||||| |||||||  ||||||||    
T  40797266 atgactttggagtcatcaacattgtagatccggagacaagggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatg 40797365  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  40797366 ctattaacatagatg 40797380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 22844189 - 22844400
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||  |||||||| ||   |||| |||||||||    
T  22844189 cgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattgtcagatca-acttcgatcaag---tgcagatcaaatca 22844284  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||| ||||||  || ||||  | |||||| ||||||| |||||| |||||||||||||||| || ||||||| |||||||  ||||||||    
T  22844285 atgactttggagttgtcaacattgcagatccgaagacatgggtattccggagacctaaatatagtcatatgcgtaggctttagtactttgtcgttttatg 22844384  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  22844385 ctattaacatggatgt 22844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 43029820 - 43030030
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  43029820 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 43029915  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| |||  |  ||||||||  |||||||    
T  43029916 atgactttggagtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtaggcaattgtactttgccattttatg 43030015  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  43030016 ctattaacatggatg 43030030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 28995286 - 28995075
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||| ||  |||||||||||| ||||| ||||||||||||   ||| ||| |||||    
T  28995286 cgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcgcttcagattgtcatatcag-cttcgatccagt---gcagatccaatca 28995191  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  28995190 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 28995091  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  28995090 ctattaacatggatgt 28995075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 50519920 - 50520131
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||  |||||    
T  50519920 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgatccag---tgcagattcaatca 50520015  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| ||| || ||| || |||| |||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||  ||||||||    
T  50520016 atgattttggcgtcatccacgttgcagatctggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatg 50520115  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  50520116 ctattaacatggatgt 50520131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 1165373 - 1165163
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| ||||||||||| |||||||||||  ||||||||||| ||| |||||||||| |||||| ||||||||||||   |||| ||| |||||    
T  1165373 cgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatca-gcttcgatccag---tgcagatccaatca 1165278  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||||||||| |||||||||||||||||||| | |  |  |||||||| ||||||||    
T  1165277 atgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagtcatatgtgtagacaattgtactttgccgttttatg 1165178  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  1165177 ctattaacatggatg 1165163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 3088641 - 3088430
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||  ||  |||||||||||||||||  ||||||||||||   ||| ||| |||||    
T  3088641 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattgtcagatcat-cttcgatccagt---gcagatccaatca 3088546  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  ||||||| |||||||||    
T  3088545 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgttgttttatg 3088446  T
Q  201 ctattaacattgatgt 216  Q
    ||||||| || |||||    
T  3088445 ctattaatatggatgt 3088430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 22286728 - 22286517
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||| ||||| ||  |||| ||||||||||||| ||||||||||||   ||| ||| |||||    
T  22286728 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggcatttgatcgcttcatattgtcagatcag-cttcgatccagt---gcagatccaatca 22286633  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  ||| || ||| || |||| |||| |||| | |||||  |||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  22286632 atgactttgacgtcatccacgttgcagatctggaaacatggttattccagagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 22286533  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  22286532 ctattaacatggatgt 22286517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 39340336 - 39340538
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||||  || ||||||||| ||||  ||| |||| ||| |||   ||  |||||    
T  39340336 cgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgttcggtttagattgtcatatcaa-cttagatctagtgctg---attcaatca 39340431  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  |||||||||| || ||||  ||||||||  |||||| |||||||| ||||||||||||||||| |||||| ||||||| | ||||||||    
T  39340432 atgactttgtcgtcgtcaacgttgcagatccggagacatgtgtattccggagacttgaatatagtcatatgtgtaggcttttatacttttccgttttatg 39340531  T
Q  201 ctattaa 207  Q
    |||||||    
T  39340532 ctattaa 39340538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 34767123 - 34767328
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| || |||||||||||||||||||||||||| ||||||||||| |||| ||||||||| ||  |||||||| ||   |||| ||| ||| |    
T  34767123 cgtctttgtgtgatgttgtttgtctttcttgtttcgttcaagtatttgttcagttcaaattgtcagaaca-acttcgatcaag---tgcagatctaatta 34767218  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| |||||| ||  || | ||  |||||||| ||||||| |||||||| ||||||||| ||||||| ||||||  |||||||| ||||||||    
T  34767219 atgattttggtgtcgtccacattgcatatccggagacatgggtattccggagacttgaatatagtcttatgtgtaggcttttgtactttgccgttttatg 34767318  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  34767319 ctattaacat 34767328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 4019732 - 4019946
Alignment:
Q  1 cgtctttgtgcgacgttgttt---gtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaa 97  Q
    |||||||||||| ||||||||   |||||| |||||| ||||||||||||||||  |||||||||||||||||| ||| ||||||||   ||| ||| ||    
T  4019732 cgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcagattgtcagatcag-cttagatccagt---gcagatccaa 4019827  T
Q  98 tcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttt 197  Q
    ||||| ||||||| |||||||||| || ||||  |||| |||  ||||||||||||||| |||||||| || ||| | |||||   |||||||  |||||    
T  4019828 tcaatgactttggcgtcgtcaacgttgcagatccggaggcatgagtattctggagacttgaatatagtaatctgtataggcttatgtactttgtcgtttt 4019927  T
Q  198 atgctattaacattgatgt 216  Q
    ||||||||||||| |||||    
T  4019928 atgctattaacatggatgt 4019946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 21586051 - 21586247
Alignment:
Q  16 ttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcg 115  Q
    |||||||||||| |||||| ||||||||| ||||||  |||||||||||||| ||| ||||||| ||||   ||||||| ||||||| ||||||  ||||    
T  21586051 ttgtttgtcttttttgttttgttcaggtacttgttcggttcagattgtcagaccag-cttcgattcagt---gcaaatccaatcaatgactttgacgtcg 21586146  T
Q  116 tcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    || ||| || ||||  ||||||||  |||||| ||||| || |||||||| |||||||| | ||||  ||||||||||||||||||||||||||| ||||    
T  21586147 tccacgttggagatccggagacatgtgtattccggagagttgaatatagtgatatgtgtagccttttgtactttgctgttttatgctattaacatcgatg 21586246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 32237973 - 32237762
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||| |||| |||||||   |||| ||  |||||    
T  32237973 cgtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagattgtcagatca-gcttagatccag---tgcacattcaatca 32237878  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||  || ||| ||| || ||||  | |||||| | ||||  ||||| || ||| ||||||||||||| ||||||  | |||||| ||||||||    
T  32237877 atgactttgatgttgtccacgttgcagatccgaagacatggatatttcggagatttgaatttagtcatatgtgtaggcttttgtgctttgcagttttatg 32237778  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  32237777 ctattaacatggatgt 32237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 45664362 - 45664569
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| ||||||| |    
T  45664362 tttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatcaatga 45664457  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    |||||| ||| || ||| || ||||  ||||| || | ||| | ||||| |||||||||||| |||||||  || ||  ||| ||||  |||||||||||    
T  45664458 ctttggcgtcatccacgttgcagatccggagatatggttatcccggagatttaaatatagtcgtatgtgtatgcatttgtaccttgcaattttatgctat 45664557  T
Q  205 taacattgatgt 216  Q
    |||||| |||||    
T  45664558 taacatggatgt 45664569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 32089907 - 32089707
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| | | ||||||||||||||||||||||||| |||||||||   || ||||||||| ||||| ||||||||||||   ||| ||| |||||    
T  32089907 cgtctttgtggggcattgtttgtctttcttgtttcgttcatgtatttgtttggtttagattgtcatatcag-cttcgatccagt---gcagatccaatca 32089812  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||  |||||||||| |||| ||  | |||||||||||||| |||||||| |||||||||| |||||| ||||||  |||||||  |||||||     
T  32089811 atgattttgacgtcgtcaacgttgaatatccg-agacataggtattccggagacttgaatatagtcacatgtgtaggcttttgtactttgtcgttttata 32089713  T
Q  201 ctatta 206  Q
    ||||||    
T  32089712 ctatta 32089707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 215
Target Start/End: Original strand, 42106283 - 42106485
Alignment:
Q  9 tgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataacttt 108  Q
    ||||||||| |||||||||||||||| |||  |||||||||||  ||||||||||||||||| ||||||||||||   |||| ||||||||||| |||||    
T  42106283 tgcgacgttatttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatca-gcttcgatccag---tgcagatcaaatcaatgacttt 42106378  T
Q  109 ggagtcgtc-aacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaa 207  Q
    || ||| || || | || | ||  |||||||  ||||||| ||||||||||||| |||||||||||| || |||| |||| |   |||||||||||||||    
T  42106379 gg-gtcatcaaaagttgcaaatccggagacaagggtattccggagacttaaatacagtcatatgtgtaggttttagtactctctcgttttatgctattaa 42106477  T
Q  208 cattgatg 215  Q
    ||| ||||    
T  42106478 catggatg 42106485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 29776667 - 29776462
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||| ||| |||   |||||||| |||||    
T  29776667 cgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttttgattgtcagatca-gcttagattcag---tgcaaatccaatca 29776572  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |||||||||| || ||| |||    | ||  |||||||  ||||||   ||||||| ||||||||||||||||  ||||||  |||||||  |||||| |    
T  29776571 ataactttggtgttgtccacgtcacaaatccggagacaagggtatttcagagacttgaatatagtcatatgtgcaggcttttgtactttgtcgttttacg 29776472  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  29776471 ctattaacat 29776462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 216
Target Start/End: Original strand, 50460341 - 50460538
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtc 114  Q
    |||||||||||||||| |||||||||| |||||||||  || |||||||||||||| | ||||||||   | |||||||| ||||||||||||||  ||     
T  50460341 gttgtttgtctttcttatttcgttcagttatttgttcggtttagattgtcagatca-gtttcgatcc---aatgcaaatccaatcaataactttgacgtt 50460436  T
Q  115 gtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgat 214  Q
    ||||||| || | ||  | ||||||  ||||||   |||||| ||||||||||||||||| ||||||  ||||||| ||||||||| | ||||||| |||    
T  50460437 gtcaacgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcatatgtgtaggcttttgtactttgttgttttatgttgttaacatggat 50460536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33977902 - 33977691
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| | |||||||||  ||||||||||| ||  ||||| |||| |||||| | |||||| |||   |||| ||| |||||    
T  33977902 cgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttgatcgcttcagtttgttagatca-gtttcgattcag---tgcagatccaatca 33977807  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| | || | ||||||||| | ||||||||||| |||||||| ||| ||  |||||||| ||||||||    
T  33977806 atgactttggtgtcatccacgttgcagatccggaaatatggttattctggaaatttaaatatagttatatgtgtaggcatttgtactttgccgttttatg 33977707  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  33977706 ttattaacatggatgt 33977691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 20203215 - 20203006
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||| || ||||||||| |||||||||||  |||| |||||| ||  |||||||||||||||||| |||| ||| |||   ||| ||| |||||||    
T  20203215 tctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcag-cttcaatcaagt---gcagatccaatcaat 20203120  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     |||| || ||| || ||| || | ||| ||||||||   ||||  ||||| |||||||||||||||||||| ||| ||  |||||||| ||||||| ||    
T  20203119 gacttcggcgtcttccacgttgcaaattcggagacatgattatttcggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatact 20203020  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  20203019 attaacatggatgt 20203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 29182585 - 29182376
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||| ||  |||||||||||  |||| |||| |||||||   |||| ||| |||||    
T  29182585 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcggttcagattgtc--atca-gctttgatccag---tgcagatccaatca 29182492  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    ||  |||| | ||| || ||| || |||| |||||||||   |||| |||||| |||||||||||||||||||| ||| ||  || ||||   |||||||    
T  29182491 atggctttagcgtcatccacgctgtagatctggagacatgattattttggagatttaaatatagtcatatgtgtaggcatttgtattttgtcattttatg 29182392  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  29182391 ctattaacatggatgt 29182376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 37051733 - 37051930
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| ||||||||||||||||||||  |   | |||||||| |||| || |||||||||||||||||||  |||||||||||   ||| ||| || ||    
T  37051733 cgtcttagtgcgacgttgtttgtcttt--tccatggttcaggtgtttgctcgattcagattgtcagatcagt-ttcgatccagt---gcagatccaacca 37051826  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |||||||||| ||| |||||| || ||||  |||| ||||| ||||| | ||| || ||||||||||||| ||| |||||   |||||||| ||||||||    
T  37051827 ataactttggcgtcatcaacgttgcagatccggaggcatagctattccgaagattttaatatagtcatatttgtaggcttatgtactttgccgttttatg 37051926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 207
Target Start/End: Original strand, 53426937 - 53427137
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||| | | ||||||||||||||||||| ||||||||||||||||  || |||||||||||| | |||| |||    || |||| ||| |||||||    
T  53426937 tctttgtgtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagattgtcagat-aagcttagat---atagtgcagatccaatcaat 53427032  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| |||||||||| || ||||  | |||| |  |||||| | |||||| ||||||||||||||||| ||||||  |||||||   ||||||| |    
T  53427033 gactttggcgtcgtcaacgttgcagatccgaagacttgagtattccgaagacttgaatatagtcatatgtgtaggcttttgtactttgtgattttatgtt 53427132  T
Q  203 attaa 207  Q
    |||||    
T  53427133 attaa 53427137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 11846686 - 11846896
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||| ||| |||||||||||||  ||||||||||| ||  ||||||||||||||||| |||| |||||     |||| ||| |||||    
T  11846686 cgtctttgtgcgacgtttttt-tctttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gctttgatcc---gatgcatatccaatca 11846780  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| ||| || ||| || ||||  |||||||| | ||||||||| | |||||||||||||||||||| ||| ||  || ||| | |||||||     
T  11846781 atgattttggcgtcatccacgttgcagatccggagacatggttattctggatatttaaatatagtcatatgtgtaggcatttgtatttttccgttttata 11846880  T
Q  201 ctattaacattgatgt 216  Q
    ||||||| || |||||    
T  11846881 ctattaaaatggatgt 11846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 43839490 - 43839283
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataa 104  Q
    |||||||||| |||||||| |||||||||||  ||||||||||  ||| || ||||||||||||||  ||||||| |||   |||| ||| |||||||||    
T  43839490 tttgtgcgacattgtttgtttttcttgtttctctcaggtatttaatcagtttagattgtcagatca-acttcgattcag---tgcagatccaatcaataa 43839395  T
Q  105 ctttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctat 204  Q
    || ||| ||| || ||| || ||||  | |||| | | ||||| | ||| ||||||||| |||||||||| ||| ||  |||||||| |||||||| |||    
T  43839394 ctctggcgtcatccacgttgcagatccgaagacgtggttattccgaagatttaaatataatcatatgtgtaggcatttgtactttgccgttttatgatat 43839295  T
Q  205 taacattgatgt 216  Q
    |||||| |||||    
T  43839294 taacatggatgt 43839283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 54240223 - 54240434
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||| ||||||||| |||||||||||  ||||||||||| ||  |||||||||| |||||| |||||||| |||   |||||||| |||||    
T  54240223 cgtctttgtgcgatgttgtttgtttttcttgtttctatcaggtatttgatcggttcagattgtgagatca-gcttcgattcag---tgcaaatccaatca 54240318  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| | | || | | || ||||  ||||||||   ||||  | ||| |||||||||||||||||||| ||| ||  || ||||  |||||||     
T  54240319 atgactttggcgacatccatgttgcagatccggagacatgattattacgaagatttaaatatagtcatatgtgtaggcatttgtattttgtcgttttata 54240418  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  54240419 ctattaacatagatgt 54240434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 20201033 - 20200824
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||| || ||||||||| |||||||||||  |||| |||||| ||  |||||||||||||||||| |||| ||| |||   ||| ||| |||||||    
T  20201033 tctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcag-cttcaatcaagt---gcagatccaatcaat 20200938  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     |||| || ||| || ||| || | ||  ||||||||   ||||  ||||| |||||||||||||||||||| ||| ||  |||||||| ||||||| ||    
T  20200937 gacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatact 20200838  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  20200837 attaacatggatgt 20200824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 33076428 - 33076627
Alignment:
Q  8 gtgcgacgttgtttgtctttcttgt--ttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataac 105  Q
    ||||||| |||||||| ||||||||  ||| |||||||||||| ||  |||||||||| |||| || ||| ||||||||   ||| ||| ||||||| ||    
T  33076428 gtgcgaccttgtttgt-tttcttgtgtttctttcaggtatttgatcggttcagattgttagattag-ctttgatccagt---gcagatccaatcaatgac 33076522  T
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctatt 205  Q
    ||||  ||| || ||| || ||||  |||| ||| | ||||| ||||| || ||||||||||||||||||||| ||  |||||||| |||||||||||||    
T  33076523 tttgacgtcatccacgttgcagatccggaggcatggttattccggagatttgaatatagtcatatgtgttggcatttgtactttgccgttttatgctatt 33076622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41882387 - 41882305
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||| |||||||    
T  41882387 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcaatccagt 41882305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25939456 - 25939386
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||||||   |||||||||| |||||||    
T  25939456 cgtctttgtgcggcgttgtttgtctttgttgtttcgttcagatatttgttatgttcagattgttagatcag 25939386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 27831253 - 27831447
Alignment:
Q  18 gtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtc 117  Q
    ||||||||||||||||| |||||  ||||||||  |||||||||||||||||| |||| ||||   || |||| ||| |||| || ||||||| ||||||    
T  27831253 gtttgtctttcttgttttgttcatatatttgtttgattcagattgtcagatca-gctttgatc---tagtgcagatctaatccatgactttggcgtcgtc 27831348  T
Q  118 aacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
     ||| || ||||  |||||||  ||||||| |||||||| ||| |  ||| |||||| | ||||  || ||||  ||||||||||||| |||| |||||    
T  27831349 cacgctgtagatccggagacacgggtattccggagacttgaatgtgatcacatgtgtagtcttttgtattttgtcgttttatgctattgacatggatgt 27831447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 2598216 - 2598420
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||||||  || ||| | | ||||||  ||| |||    || |||| ||| |||||    
T  2598216 cgtctttgtgcaacgttgtttctctttcttgtttcgttcatgtatttgttcggtttagagt-ttagatca-actttgat---ttagtgcagatccaatca 2598310  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| |||||||| | || | ||| | ||||||  |||||  |||||||  ||||||||||||||||| ||| ||  |||||||  || |||||    
T  2598311 atgactttggtgtcgtcaatgttgcaaattcgaagacatgagtatttcggagactagaatatagtcatatgtgtaggcatttgtactttgtcgtgttatg 2598410  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  2598411 ctattaacat 2598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 48652327 - 48652216
Alignment:
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||||||| |||||||||| || ||||  ||||||||  | |||| |||||||| ||||||||||||| ||| ||| |   ||| ||||||||||||||||    
T  48652327 actttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgctgttttatgcta 48652228  T
Q  204 ttaacattgatg 215  Q
    ||||||| ||||    
T  48652227 ttaacatggatg 48652216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1220224 - 1220154
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||| | |||||||||||| ||||||||||  |||||||||||| ||||| |||||| |||||    
T  1220224 cgtctttgtgcggctttgtttgtcttttttgtttcgtttgggtatttgttcatttcaggttgtcatatcag 1220154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 10977524 - 10977590
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    ||||| |||||||||||||||||||| |||  |  ||||||||||||||||||||||||||| ||||    
T  10977524 ggagatttaaatatagtcatatgtgtaggcaattgtactttgctgttttatgctattaacatggatg 10977590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14741303 - 14741234
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttg-tttcgttcaggtatttgttcaattcagattgtcagatc 69  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||||||||| | | ||||||||||||||||    
T  14741303 cgtctttgtgcgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagattgtcagatc 14741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 21803750 - 21803879
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||||||| ||||||| ||||||  ||| || ||| || ||||  |||||||| | ||||| ||||| ||||||| |||||||||||| |||  |  |||    
T  21803750 tgcaaatccaatcaatgactttgacgtcatccacgttgcagatccggagacatggttattccggagatttaaatacagtcatatgtgtaggcacttgtac 21803849  T
Q  187 tttgctgttttatgctattaacattgatgt 216  Q
    |||| ||||| ||||||||||||| |||||    
T  21803850 tttgatgtttcatgctattaacatggatgt 21803879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 36540646 - 36540535
Alignment:
Q  6 ttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataac 105  Q
    ||||| || ||||||||||||||||||||| |||| |||||||| |  |||||||||||||||||  ||||||| |||||   || || |||||||| ||    
T  36540646 ttgtgggatgttgtttgtctttcttgtttcattcaagtatttgtccggttcagattgtcagatca-acttcgattcagta---cagattaaatcaatgac 36540551  T
Q  106 tttggagtcgtcaacg 121  Q
    | ||||||| ||||||    
T  36540550 tctggagtcctcaacg 36540535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 26412442 - 26412596
Alignment:
Q  18 gtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtc 117  Q
    |||||||| |||||||||||||| ||||||||||  ||||||||||||||| |   ||||||||||| |  || ||| ||||||| | ||||| ||||||    
T  26412442 gtttgtctctcttgtttcgttcaagtatttgttcggttcagattgtcagatta-aattcgatccagtgc-acatatccaatcaatgagtttggcgtcgtc 26412539  T
Q  118 aacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    |||| || | ||  ||||||||   ||||    ||||||||||||||||||||||||    
T  26412540 aacgttgcaaatccggagacatgaatatttcaaagacttaaatatagtcatatgtgt 26412596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 49627987 - 49627871
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||||||||  ||||||  ||||| | ||||||||||||| ||| ||| |   |||||||| ||||||    
T  49627987 caatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccagagacatgaatatagtcatatttgtaggcataggtactttgccgtttta 49627888  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  49627887 tgctattaacatggatg 49627871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 55446294 - 55446410
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||| | |||||||||| || ||||  |||| |||  |||||||| |||||| ||||||||||||| | |  || |  ||||||||||||||||    
T  55446294 caatgactttagcgtcgtcaacgttgcagatccggagtcatgagtattctgaagacttgaatatagtcatatttatatgcatagatactttgctgtttta 55446393  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  55446394 tgctattaacatagatg 55446410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 36691691 - 36691620
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||| ||||||| |||||||||| || |||| |||||||||  |||||| |||||||| |||||||||||||    
T  36691691 caatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccggagacttgaatatagtcatat 36691620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7656492 - 7656422
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||||||  ||||||||||||||||||||  ||||||||||| ||  || ||||||| |||||||    
T  7656492 cgtctttgtgcgatattgtttgtctttcttgtttctctcaggtatttgatcggtttagattgttagatcag 7656422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 22893690 - 22893644
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgt 49  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||    
T  22893690 tctttgtacggcgttgtttgtctttcttgtttcgttcagatatttgt 22893644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 47587222 - 47587145
Alignment:
Q  133 gagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacat 210  Q
    |||||| | ||||| |||| ||||||| |||||||||| ||| |||||| ||||| ||  ||||||||||||||||||    
T  47587222 gagacaaaagtattatggatacttaaaaatagtcatatttgtaggcttttatactctgtcgttttatgctattaacat 47587145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 34103627 - 34103523
Alignment:
Q  112 gtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacatt 211  Q
    |||||||||| || ||||  ||||| ||  |||||| ||||||||  |||||||||||| ||| | | | |||||||||| ||||| ||||||||||||     
T  34103627 gtcgtcaacgttgcagatacggagaaatgagtattccggagacttggatatagtcatatttgtagtcataaatactttgccgttttgtgctattaacatg 34103528  T
Q  212 gatgt 216  Q
    |||||    
T  34103527 gatgt 34103523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 55455108 - 55455224
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| ||||| |||| || ||||  ||||||||  |||||| |||||| | ||||||||||||| |||  || |   |||||||| ||||||    
T  55455108 caatgactttggcgtcgttaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatatttgtaagcatatgtactttgccgtttta 55455207  T
Q  199 tgctattaacattgatg 215  Q
    |||||||||||| ||||    
T  55455208 tgctattaacatggatg 55455224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25374047 - 25374008
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttca 40  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  25374047 cgtctatgtgcgacgttgtttttctttcttgtttcgttca 25374008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40461972 - 40461905
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagat 68  Q
    |||||||||||| |||||||||||||||||||||| | ||  |||||| |   |||||||||||||||    
T  40461972 cgtctttgtgcggcgttgtttgtctttcttgtttcatacatatatttgattggttcagattgtcagat 40461905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 30156166 - 30156056
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctatt 205  Q
    ||||| |||||||| | || ||||  || ||||| ||||||  |||||| | ||||||||||||| ||| ||| |  ||||||||  |||||||||||||    
T  30156166 tttggcgtcgtcaaggttgcagatccggggacatgggtatttcggagacatgaatatagtcatatttgtaggcatatatactttgtcgttttatgctatt 30156067  T
Q  206 aacattgatgt 216  Q
    ||||| |||||    
T  30156066 aacatggatgt 30156056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 35174945 - 35175015
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcata 169  Q
    |||| ||||||| ||| |||||| || |||| |||||||||  ||||||||||||| | ||||||||||||    
T  35174945 caatgactttggcgtcatcaacgttgcagatatggagacatgagtattctggagacatgaatatagtcata 35175015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 36540529 - 36540463
Alignment:
Q  150 gagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||| ||||||||||| ||||| ||||| | |||||||| |||||||| |||||| || |||||    
T  36540529 gagacttgaatatagtcatttgtgtaggcttcagtactttgccgttttatgttattaatatagatgt 36540463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40365363 - 40365432
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||||| || |||||||||| ||| | | |||||| ||||||||||||| || |||||||||||||||    
T  40365363 cgtctttgtacggcgttgtttgttttt-tagattcgtttaggtatttgttcagtttagattgtcagatcag 40365432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 48401132 - 48401198
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    |||||| ||||||||||||||| ||| ||| |   |||||||||||| |||||||||||||| ||||    
T  48401132 ggagacataaatatagtcatatttgtaggcatatgtactttgctgttatatgctattaacatggatg 48401198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 48401388 - 48401454
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatg 215  Q
    |||||| ||||||||||||||| ||| ||| |   |||||||||||| |||||||||||||| ||||    
T  48401388 ggagacataaatatagtcatatttgtaggcatatgtactttgctgttatatgctattaacatggatg 48401454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 105945 - 105814
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaat---atagtcatatgtgttggctttaa 183  Q
    ||||||||  |||||| ||||| | |||||||||| || ||||| ||||||||  |||||| ||| |||| |||   |||||||||| ||| ||| |       
T  105945 tgcaaatccgatcaatgacttttgtgtcgtcaacgttgcagattcggagacatgagtattccggaaacttcaattatatagtcatatttgtaggcatagg 105846  T
Q  184 tactttgctgttttatgctattaacattgatg 215  Q
    |||||||  |||||||||||||||||| ||||    
T  105845 tactttgtcgttttatgctattaacatggatg 105814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 4206448 - 4206375
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||||| ||||||| |||||||||| || ||||  ||||||||| |||||  |||||| | |||||||||||||    
T  4206448 atcaatgactttggcgtcgtcaacgttgtagatcgggagacataagtatttcggagacatgaatatagtcatat 4206375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 13701867 - 13701823
Alignment:
Q  126 agatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||||||||||||  |||||| |||||| |||||||||||||||    
T  13701867 agatttggagacatgagtattccggagacataaatatagtcatat 13701823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 21084614 - 21084510
Alignment:
Q  106 tttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctatt 205  Q
    ||||| |||||||||  || |||| |||||| || ||||||||  |||| | ||||||||||||| ||  ||||| | || ||||  |||||||||||||    
T  21084614 tttggtgtcgtcaacattgcagatctggagatatgggtattctaaagacctgaatatagtcatatatgcaggcttaagtattttgtcgttttatgctatt 21084515  T
Q  206 aacat 210  Q
    |||||    
T  21084514 aacat 21084510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 47914571 - 47914488
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttg-tttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||| ||||||||||||| ||||||| ||||  ||||||||||| | | |||||||||| | |||| |||||||| ||||    
T  47914571 cgtctttgtccgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagattgttatatca-gcttcgattcagt 47914488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 48061035 - 48060999
Alignment:
Q  32 tttcgttcaggtatttgttcaattcagattgtcagat 68  Q
    ||||||||||||||||||||  |||||||||||||||    
T  48061035 tttcgttcaggtatttgttcggttcagattgtcagat 48060999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 51990752 - 51990696
Alignment:
Q  114 cgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||||||| || ||||  ||||||||  ||||||||||||| |||||||||||||||    
T  51990752 cgtcaacgttgcagatccggagacatgagtattctggagacataaatatagtcatat 51990696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 8e-51; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 10744720 - 10744929
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||||  ||||||||||||||||| |||||||||| || |    |||||||| |    
T  10744720 cgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcagattgtcagatca-gcttcgatccggtgc----aatcaaatta 10744814  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||||||||||||||||| || | ||  |||||||  ||||||| |||||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10744815 atgactttggagtcgtcaacgttgcaaatccggagacaagggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatg 10744914  T
Q  201 ctattaacattgatg 215  Q
    |||||| ||| ||||    
T  10744915 ctattagcatggatg 10744929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 216
Target Start/End: Original strand, 20496332 - 20496541
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    ||||||| |||| |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||| ||| ||||||||   ||||||| |||||||    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcag-cttagatccagt---gcaaatccaatcaat 20496427  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| |||||||||| || | || | |||| || ||||||| |||||||| ||||||||||||||||| ||||||  |||||||| ||||||||||    
T  20496428 gactttggtgtcgtcaacgttgcatatcttgagagatgggtattccggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgct 20496527  T
Q  203 attaacattgatgt 216  Q
    ||||| || |||||    
T  20496528 attaatatggatgt 20496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 23843401 - 23843190
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  | ||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||  |||||    
T  23843401 cgtctttgtgcgacgttgtttgtctttcttgtttctcttaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagattcaatca 23843306  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| |||||||||||||||| ||| ||| ||  ||| |||| ||||||||    
T  23843305 atgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatatgtaggcatttgtaccttgccgttttatg 23843206  T
Q  201 ctattaacattgatgt 216  Q
    |||||| ||| |||||    
T  23843205 ctattagcatggatgt 23843190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 4663795 - 4663586
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    |||||||||||| |||||| | ||| ||||||||||||||||||||||   ||| |||||||| |||||  | |||||||||   ||| |||||||||||    
T  4663795 tctttgtgcgactttgtttttttttattgtttcgttcaggtatttgtttggttctgattgtcatatcagt-tacgatccagt---gcatatcaaatcaat 4663700  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||||||| |||| | ||  |||| ||||| ||| ||||||| ||||||||||||| |||||||||||  |||||| |||| |||  |||||||||    
T  4663699 gactttggagtcatcaatgttgctgattcggagaaatatgtattcttgagacttaaatatggtcatatgtgtaagctttagtactatgccattttatgct 4663600  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  4663599 attaacatggatgt 4663586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 12576458 - 12576253
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  12576458 cgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcgcttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 12576363  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  ||| |||  ||||||||    
T  12576362 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtaccttgtcgttttatg 12576263  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  12576262 ctattaacat 12576253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 32804432 - 32804635
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||  | ||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||  |||||||| ||   |||| ||| |||||    
T  32804432 cgtctttgtatggcgttgtttgtctttcttgtttcgttcatgtatttgtttgattcagattgtgagatca-acttcgatcaag---tgcagatccaatca 32804527  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| |||||| | | || ||||| ||||||||   |||||  ||||||| |||||||| |||||||| ||||||  ||||||| |||||||||    
T  32804528 atgactttggtgtcgtccatgttgtagattcggagacatgaatattccagagacttgaatatagttatatgtgtaggcttttgtactttgttgttttatg 32804627  T
Q  201 ctattaac 208  Q
    ||||||||    
T  32804628 ctattaac 32804635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 11426078 - 11426292
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  |||||||||||||||||| ||||||||||||   ||| ||  |||||    
T  11426078 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatctcttcagattgtcagatcag-cttcgatccagt---gcagattcaatca 11426173  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatat----agtcatatgtgttggctttaatactttgctgttt 196  Q
    || ||||||| ||| || ||| || ||||  | | |||| | ||||| ||||| ||||||||    |||||||||||| ||| ||  ||||||| |||||    
T  11426174 atgactttggcgtcatccacgttgtagatccgaaaacatggttattccggagatttaaatatagtcagtcatatgtgtaggcatttgtactttgttgttt 11426273  T
Q  197 tatgctattaacattgatg 215  Q
    |||||||||||||| ||||    
T  11426274 tatgctattaacatggatg 11426292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 19759925 - 19760130
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||| ||  ||||||||||||||||| | ||||||||||   |||| ||| |||||    
T  19759925 cgtctttgtgcgacgttgtttgtatttcttgtttctctcatgtatttgatcggttcagattgtcagatca-gtttcgatccag---tgcagatccaatca 19760020  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| |||||||||||||||||||  | | ||  ||| ||||  |||||||    
T  19760021 atgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgcagacatttgtaccttgccattttatg 19760120  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  19760121 ctattaacat 19760130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 31804357 - 31804563
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||| ||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||  ||||||| |||   ||| ||||||| |    
T  31804357 cgtcttagtgcgacattgtttgtctttcttgtttcgctcaagtatttgctcaattcagattgtcagatcaga-ttcgatctagt---gcagatcaaatga 31804452  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||||  |||||||| || ||||| | | ||||  |||||   |||||||||||||| ||||    || | ||||| |||||||| ||||||||    
T  31804453 atgactttggaaccgtcaacgttgcagattcgaaaacatgagtatttcagagacttaaatataatcat----gtagactttagtactttgccgttttatg 31804548  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  31804549 ctattaacatggatg 31804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 13234085 - 13233874
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  |||| |||||||||||| | |||||||   || |||| ||| |||||    
T  13234085 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcaaattgtcagatca-gtttcgatc---tagtgcagatccaatca 13233990  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || | ||||| ||| || ||| || ||||  |||||||| | ||||| ||||| |||||||||||||||||||| |||     || ||||  ||||||||    
T  13233989 atgattttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtaggcaactgtattttgtcgttttatg 13233890  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  13233889 ctattaacatggatgt 13233874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15128106 - 15127896
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||| |||||||||||||||| |||| |||| ||||||||||  ||||||||||||  |||  |||||||||   |||||| |||||||||    
T  15128106 cgtctttgtgcgatgttgtttgtctttcttctttcattcaagtatttgttctgttcagattgtcaattca-acttcgatcc---actgcagatcaaatca 15128011  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| || ||| ||| || ||||  |||| | ||  ||||||| |||||| || |||||||||||||| |||||   |||| || |||||||||    
T  15128010 atgactttggcgttgtccacgttgcagatccggaggc-taaatattctgaagacttgaacatagtcatatgtgtaggcttctgtactctgttgttttatg 15127912  T
Q  201 ctattaacattgatgt 216  Q
     ||||||||| |||||    
T  15127911 ttattaacatggatgt 15127896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 31748094 - 31748305
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||| ||||||| ||| | |||||||||||||||| |||||||| |||   ||| ||  |||||    
T  31748094 cgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttgatcagtacagattgtcagatcag-cttcgatcaagt---gcagattcaatca 31748189  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
     | ||||  | ||| ||  || || | ||  ||||| || | ||||||||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||    
T  31748190 ttgacttcagcgtcatcctcgttgcaaatacggagatatggttattctggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatg 31748289  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  31748290 ctattaacatggatgt 31748305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 7049382 - 7049593
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||||| ||  |||||||||||||||||  |||||||||||   |||| ||  |||||    
T  7049382 cgtctttgtgagacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-acttcgatccag---tgcagatgcaatca 7049477  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||   || || ||| || ||||  ||||| ||   ||||| | ||| |||||||||||||||||||| ||| ||  |||||||  ||||||||    
T  7049478 atgactttgacatcatccacgttgcagatccggagatatgattattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatg 7049577  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  7049578 ctattaacatggatgt 7049593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 1944233 - 1944438
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| |||||   |||| ||||||| |||| ||||||||||   | |||  ||| |||||    
T  1944233 cgtctttgtgcggcgttgtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatca-gcttcgatcc---aatgcggatccaatca 1944328  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    |||| ||||| |||||| ||| || | ||  | ||||||   ||||||| ||| || ||||||||  ||||||| ||||||  |  |||| |||||||||    
T  1944329 ataattttggcgtcgtccacgttgcatatccgaagacatgaatattctgaagatttgaatatagtactatgtgtgggcttttgtgttttgttgttttatg 1944428  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  1944429 ctattaacat 1944438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20845145 - 20845356
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||| ||||||| |||||||||||  |||| |||||| ||  |||||||||||||||||  |||||||||||   |||| ||| |||||    
T  20845145 cgtctttgtgcgacgctgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatca-acttcgatccag---tgcagatccaatca 20845240  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || |||| || ||| || ||| || | ||   || |||| | ||||| ||| | |||||||||||||||| ||| | | ||  |||||||  ||||||||    
T  20845241 atgacttcggcgtcatccacgttgcaaatccagaaacatggttattccggatatttaaatatagtcatatttgtagacatttgtactttgtcgttttatg 20845340  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  20845341 ctattaacatggatgt 20845356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 904405 - 904485
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatcca 82  Q
    |||||||||| ||||||||||||||||||||||| |||||  ||| |||||  |||||| |||||||||| |||||||||||    
T  904405 cgtctttgtgtgacgttgtttgtctttcttgttttgttcaactatatgttcggttcagactgtcagatca-gcttcgatcca 904485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 5417119 - 5416990
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatac 186  Q
    |||| ||| ||||||  ||||||| |||||| ||| || ||||   || |||| ||||||  |||||||| |||||||||||||||||  |||||  |||    
T  5417119 tgcagatccaatcaaagactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatatagtcatatgtgtatgcttttgtac 5417020  T
Q  187 tttgctgttttatgctattaacattgatgt 216  Q
    ||||| |||||||||||||||||| |||||    
T  5417019 tttgccgttttatgctattaacatggatgt 5416990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8644382 - 8644451
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||   ||||||||||| |||||    
T  8644382 cgtctttgtgcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatca 8644451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 33194756 - 33194900
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtc 114  Q
    |||||||||||||||| |||| ||| |||||||||||  ||||||||||||||||||               |||||||| ||||||| |||||||  ||    
T  33194756 gttgtttgtctttcttatttccttcgggtatttgttcggttcagattgtcagatcag---------------tgcaaatctaatcaatgactttggtttc 33194840  T
Q  115 gtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
     || ||| || ||||| |||||||| |||||||||||||||| ||||||||| |||||||    
T  33194841 ttccacgttgtagattcggagacatgggtattctggagacttgaatatagtcttatgtgt 33194900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 548832 - 548682
Alignment:
Q  12 gacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttgga 111  Q
    |||||||||| | |||||||||||  ||||||||||| ||  |||||||||||| |||| |||||||||   || |||| ||| ||||||| |||||||     
T  548832 gacgttgtttctttttcttgtttctatcaggtatttgatcggttcagattgtcatatca-gcttcgatc---tagtgcagatccaatcaattactttggc 548737  T
Q  112 gtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtc 166  Q
    ||| || ||| || |||| |||||||||   ||||| ||||| ||||||||||||    
T  548736 gtcatccacgctgcagatctggagacatgattattccggagatttaaatatagtc 548682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 8633169 - 8632968
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||   ||| |||||||||||  ||||||||| | ||  |||||||||||||||||| ||||||||||  || ||| ||| |||||    
T  8633169 cgtctttgtgcgacgtt---tgtttttcttgtttctctcaggtatt-gatcgcttcagattgtcagatcag-cttcgatcca--ac-gcagatccaatca 8633078  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||  || ||||  ||| |||| | ||||| ||||| |||||||||||||||||||| ||| ||  |||||||   ||| |||    
T  8633077 attactttggcgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgtcatttcatg 8632978  T
Q  201 ctattaacat 210  Q
    ||||||||||    
T  8632977 ctattaacat 8632968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 8644509 - 8644576
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||| ||||||||||||||||| ||||||  |||||||  |||||||||||||||||| |||||    
T  8644509 ggagactttaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggatgt 8644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5544844 - 5544914
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||||||||| ||||||||||||||||||| |||||||||||| ||||||   |||||| ||||| |||||    
T  5544844 cgtctttgtgtgacgttgtttgtctttcttatttcgttcaggtgtttgtttggttcagaatgtcatatcag 5544914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 12654195 - 12654077
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttt 196  Q
    |||||| ||||||| ||| |||||| || ||||| ||||||||  |||||| |||||||| ||||||||||||| ||| ||| |   || ||||  ||||    
T  12654195 atcaatgactttggcgtcatcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgtattttgtcgttt 12654096  T
Q  197 tatgctattaacattgatg 215  Q
    |||||||||||||| ||||    
T  12654095 tatgctattaacatggatg 12654077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 16913612 - 16913673
Alignment:
Q  155 ttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||||||||||||||| ||| ||  |||||||| |||||||||||||||||| |||||    
T  16913612 ttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatggatgt 16913673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 891742 - 891793
Alignment:
Q  18 gtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatc 69  Q
    ||||||||||||| ||||||||||||||||||||  || |||||||||||||    
T  891742 gtttgtctttcttatttcgttcaggtatttgttcggtttagattgtcagatc 891793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 12481249 - 12481138
Alignment:
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgcta 203  Q
    ||||||| |||||||||| || ||||  ||||||||  | |||| |||||||| ||||||||||||| ||| ||| |   ||| |||| |||||||||||    
T  12481249 actttggcgtcgtcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgccgttttatgcta 12481150  T
Q  204 ttaacattgatg 215  Q
    ||||||| ||||    
T  12481149 ttaacatggatg 12481138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 12652166 - 12652105
Alignment:
Q  9 tgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||  ||  |||||||||||||    
T  12652166 tgcgatgttgtttttctttcttgtttcgttcatgtatttgttcggttaggattgtcagatca 12652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 13871522 - 13871439
Alignment:
Q  87 tgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||||||  |||||| ||||||| |||||||||| || ||||  ||||||||  |||||| |||||| | |||||||||||||    
T  13871522 tgcaaatctgatcaatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatat 13871439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 20745043 - 20744988
Alignment:
Q  15 gttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    |||||||||||||||||||||||| | ||||||||||  ||||||||  |||||||    
T  20745043 gttgtttgtctttcttgtttcgtttatgtatttgttcggttcagattaacagatca 20744988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34020742 - 34020810
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||||| ||||||||||||| |||| | ||  |||||||| ||||||||  |||||||||||||||||    
T  34020742 cgtctttgtacgacgttgtttgtttttcctctt--gttcaggtgtttgttcagatcagattgtcagatcag 34020810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 2488411 - 2488485
Alignment:
Q  142 gtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||||||||||||| ||||||| || |||  || |  ||||||||  |||||||||||||||||| |||||    
T  2488411 gtattctggagacttaaacatagtcacatttgtaagcatagatactttgtcgttttatgctattaacatagatgt 2488485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 12652079 - 12652009
Alignment:
Q  104 actttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgt 174  Q
    ||||||| |||||||||| || ||||  |  ||| ||||||||| |||||||| |||||||||||||||||    
T  12652079 actttggcgtcgtcaacgttgcagatccgacgacttaggtattccggagacttgaatatagtcatatgtgt 12652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16913464 - 16913533
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    |||| |||||||||||||||||| |||| ||||||  ||| ||||||| ||  ||||||||||||||||||    
T  16913464 cgtccttgtgcgacgttgtttgtttttc-tgtttctctcatgtatttgatctgttcagattgtcagatcag 16913533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 29284977 - 29285051
Alignment:
Q  96 aatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    ||||||| ||||||  ||| |||||| || |||| || ||||||| ||||||| ||||||| |||||||||||||    
T  29284977 aatcaatgactttgatgtcatcaacgttgcagatatgaagacatatgtattctagagacttgaatatagtcatat 29285051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32457783 - 32457848
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcaga 67  Q
    |||||||||||||| |||||| | |||||||||||  ||||||||||| ||  ||||||||||||||    
T  32457783 cgtctttgtgcgacattgtttat-tttcttgtttctctcaggtatttgatcggttcagattgtcaga 32457848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 22530419 - 22530498
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagt 84  Q
    ||||||||||| |||||||||||||||| ||| ||| | |||||||||| |||  ||| |||||||||  ||||||||||||    
T  22530419 tctttgtgcgatgttgtttgtctttctt-ttttgtttaagtatttgttcgattttgatggtcagatca-acttcgatccagt 22530498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5417175 - 5417139
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgt 37  Q
    |||||||||||| |||||||| |||||||||||||||    
T  5417175 cgtctttgtgcggcgttgtttctctttcttgtttcgt 5417139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 11752 - 11569
Alignment:
Q  4 ctttgtgcgacgttgtttgtctttcttgttt--cgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||||||||||| ||||||||| || |||  |||||| |||||||||||||||||||||||| ||||| ||||||||||||   ||| ||||||||||    
T  11752 ctttgtgcgacgttatttgtcttttttttttttcgttcatgtatttgttcaattcagattgtcaaatcag-cttcgatccagt---gcagatcaaatcaa 11657  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatacttt 189  Q
    | | |||||||||||||||| || ||||   || |||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11656 tgattttggagtcgtcaacgttgcagatccagaaacatgggtattctggagacttaaatatagtcatatgtgtaggctttaatacttt 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 5503 - 5299
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| ||  |||| ||||||| |||| ||||||||||||   |||| ||| |||||    
T  5503 cgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcatattgtcatatca-gcttcgatccag---tgcagatccaatca 5408  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| |||||||||||||||||||| |||  |  ||| |||| ||||||||    
T  5407 atgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtaggcacttgtaccttgccgttttatg 5308  T
Q  201 ctattaaca 209  Q
    |||||||||    
T  5307 ctattaaca 5299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12180 - 11970
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||    || |||| ||| |||||    
T  12180 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgat---ttagtgcagatccaatca 12085  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||  |||||||| | ||||| ||||| ||||||||||||| ||| || ||| ||  |||||||   |||||||    
T  12084 atgactttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagtcacatgcgtaggcatttgtactttgtcattttatg 11985  T
Q  201 ctattaacattgatg 215  Q
    |||||||||| ||||    
T  11984 ctattaacatggatg 11970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 136997 - 136840
Alignment:
Q  55 tcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagac 154  Q
    ||||||||||||||||  |||||||| |||   ||| ||||||||||  |||||||||||||||||| || ||||   ||||||| ||||||| ||||||    
T  136997 tcagattgtcagatcaa-cttcgatcaagt---gcagatcaaatcaacgactttggagtcgtcaacgttgcagatccagagacatgggtattccggagac 136902  T
Q  155 ttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    ||||||||||||||||| ||  |||| | ||| ||||||||||||||||||||||| |||||    
T  136901 ttaaatatagtcatatgcgtaagcttcagtaccttgctgttttatgctattaacatggatgt 136840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 137035 - 137002
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgttt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  137035 cgtctttgtgcgacgttgtttgtttttcttgttt 137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 216
Target Start/End: Original strand, 36689 - 36872
Alignment:
Q  29 ttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaataactttggagtcgtcaacgatgaaga 128  Q
    |||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||||   ||| ||| ||||||| ||||||| ||| || ||| || |||    
T  36689 ttgtttctctcaggtatttgatcagttcagattgtcagatcag-cttcgatccagt---gcagatccaatcaatgactttggcgtcatccacgttgcaga 36784  T
Q  129 tttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |  ||| |||  | ||||||||||| |||||||||||||||||||| |||  |  ||||||||  ||||||||||||||||| |||||    
T  36785 tccggatacagggttattctggagatttaaatatagtcatatgtgtaggcaattgtactttgccattttatgctattaacatggatgt 36872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 244773 - 244982
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatca 100  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||  |  ||||||||||||||||| ||||||||||||   |||| ||| |||||    
T  244773 cgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgaccggttcagattgtcagatca-gcttcgatccag---tgcagatccaatca 244868  T
Q  101 ataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatg 200  Q
    || ||||||| ||| || ||| || ||||| ||||| ||   ||||| ||||| ||||   |||  |||||||| |||  |  |||||||| ||||||||    
T  244869 atgactttggcgtcatccacgttgtagattcggagatatgattattccggagatttaa--ttagcgatatgtgtaggcaattgtactttgccgttttatg 244966  T
Q  201 ctattaacattgatgt 216  Q
    |||||||||| |||||    
T  244967 ctattaacatggatgt 244982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 9633 - 9424
Alignment:
Q  3 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaat 102  Q
    ||||||||||||||| ||||| || ||||||||  | ||||||||  ||| || ||||| ||| ||||| ||||||||||||   ||| ||  |||||||    
T  9633 tctttgtgcgacgttttttgttttccttgtttctcttaggtatttaatcactttagattatcatatcag-cttcgatccagt---gcagattcaatcaat 9538  T
Q  103 aactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgct 202  Q
     ||||||| ||| || ||| || ||||  ||| |||| | ||||| | ||| |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  9537 gactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgct 9438  T
Q  203 attaacattgatgt 216  Q
    |||||||| |||||    
T  9437 attaacatggatgt 9424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 1103 - 970
Alignment:
Q  2 gtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatccagtactgcaaatcaaatcaa 101  Q
    |||||| |||||  |||||||| |||||||||||  ||||||||||| ||  ||||||||||||||||| ||||||||||||   |||| ||| ||||||    
T  1103 gtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatca-gcttcgatccag---tgcagatccaatcaa 1008  T
Q  102 taactttggagtcgtcaacgatgaagatttggagacat 139  Q
    | ||||||| ||| || ||| || |||| || ||||||    
T  1007 tgactttggcgtcatccacgttgcagatctgaagacat 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11151 - 11221
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcag 71  Q
    ||||||| ||||||||||||||| |||||||||||  ||||||||||| || ||| ||||||||| |||||    
T  11151 cgtctttatgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgatttagattgtcaaatcag 11221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 1114 - 1049
Alignment:
Q  5 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||   |||| ||||||||||||    
T  1114 tttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatca 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 917 - 1117
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatcaggcttcgatc-cagtactgcaaatcaaatc 99  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||||| |||||     |||||||||||||  |||||||  ||||   ||| ||| ||||    
T  917 cgtctttgtgcggcgttgtttgtctttcttgtta-gttcacgtattggttca-----gattgtcagatcaa-cttcgatttcagt---gcacatccaatc 1006  T
Q  100 aataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgttttat 199  Q
    ||| ||||||  |||||||| | || | ||  | | |||| ||||||| |  ||||| ||||||||||||||||| ||||||  |||||||  |||||||    
T  1007 aatgactttgacgtcgtcaatgttgcatatccgcatacatgggtattccgatgacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttat 1106  T
Q  200 gctattaacat 210  Q
    |||||||||||    
T  1107 gctattaacat 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 6758 - 6695
Alignment:
Q  7 tgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattgtcagatca 70  Q
    |||||| |||| |||||||||||||||||||||||| ||||| ||  || ||||||||||||||    
T  6758 tgtgcggcgttatttgtctttcttgtttcgttcaggcatttgatcggtttagattgtcagatca 6695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 10162 - 10095
Alignment:
Q  149 ggagacttaaatatagtcatatgtgttggctttaatactttgctgttttatgctattaacattgatgt 216  Q
    |||||||| || |||||||||||||| || |||  ||||||||| ||||||||||||||||| |||||    
T  10162 ggagacttgaagatagtcatatgtgtaggattttgtactttgctattttatgctattaacatggatgt 10095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10288 - 10239
Alignment:
Q  1 cgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgtt 50  Q
    |||||||||||   |||||||||||||||||||||||  |||||||||||    
T  10288 cgtctttgtgcattgttgtttgtctttcttgtttcgtctaggtatttgtt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 2328 - 2255
Alignment:
Q  97 atcaataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatat 170  Q
    |||||| ||||||| |||||||| | || ||||  ||||||||  ||||||||||||||| |||||||||||||    
T  2328 atcaatgactttggcgtcgtcaatgttgcagatccggagacatgagtattctggagacttgaatatagtcatat 2255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 35321 - 35438
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| |||||||||| || ||||  ||| ||||  |||||| |||||||| ||||| ||||||| | | ||| |   |||||| ||||||||    
T  35321 caatgactttggcgtcgtcaacgttgcagatccggatacatgagtattccggagacttgaatattgtcatatttataggcatatgtactttactgtttta 35420  T
Q  199 tgctattaacattgatgt 216  Q
    |||||||||||| |||||    
T  35421 tgctattaacatggatgt 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 207
Target Start/End: Original strand, 105271 - 105379
Alignment:
Q  99 caataactttggagtcgtcaacgatgaagatttggagacataggtattctggagacttaaatatagtcatatgtgttggctttaatactttgctgtttta 198  Q
    |||| ||||||| ||| |||||| || ||||  |||| ||| | ||||  ||||| || ||||||||||||| ||| |||||  |||||||| |||||||    
T  105271 caatgactttggcgtcatcaacgttgcagatccggaggcatggctatttcggagattttaatatagtcatatttgtaggcttatatactttgttgtttta 105370  T
Q  199 tgctattaa 207  Q
    |||||||||    
T  105371 tgctattaa 105379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University