View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6861_low_2 (Length: 618)
Name: NF6861_low_2
Description: NF6861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6861_low_2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 526; Significance: 0; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 19 - 608
Target Start/End: Original strand, 10599105 - 10599689
Alignment:
| Q |
19 |
gaaacaacagctacaatggaaacattccacaagaattgggtcgtttgtcaaaattagggtatctccttctactcaacaactcgttggttggggaatttcc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599105 |
gaaacaacagctacaatggaaacattccacaagaattgggtcgtttgtcaaaattagggtatctccttctactcaacaactcgttggttggggaatttcc |
10599204 |
T |
|
| Q |
119 |
tataaacttgacaaagtgctatgagctcaaaaccatagacttggaaggaaacaatttgattggtaaattacctagccaaattggttctcttcaaaagctt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599205 |
tataaacttgacaaagtgctatgagctcaaaaccatagacttggaaggaaacaatttgattggtaaattacctagccaaattggttctcttcaaaagctt |
10599304 |
T |
|
| Q |
219 |
caaaatttcttcattgagagaaacaatttatccggaaaaatcccaccatccataggtaatctttcatcccttgatattttatcgatcagttataataact |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
10599305 |
caaaatttcttcattgagagaaacaatttatccagaaaaatcccaccatccataggtaatctttcatcccttgctgttttatcgatcagttataataact |
10599404 |
T |
|
| Q |
319 |
tggtgggaaatattccacaggaaatgtgcttcctaaaacagttatgggctatagcagtgcatgccaacaatttgtctggtacatttccttcttgtcttta |
418 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10599405 |
tggtgggaaatattccacaggaaatgtgtttcctaaaacatttatgggctatagcagtggatgtcaacaaattgtctggtacatttccttcttgtcttta |
10599504 |
T |
|
| Q |
419 |
taatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccacactctccccaatctccaatatttt |
518 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10599505 |
taatatgtcatc-----aagttatctcagttgcagcgaataactttagtggctctcttccacccaatatgttctacactctccccaatctccaatatttt |
10599599 |
T |
|
| Q |
519 |
acggtcggatcaaataaattctcaggtcgaatccctacttcaatttcaaatgcttcttctttgacattatttgaaatcggtgacaaccat |
608 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10599600 |
acggtcggatcaaataaattctcaggtccaatccctacttcaatttcaaatgcttcttctttgacattatttgaaatcggtgacaaccat |
10599689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 19 - 608
Target Start/End: Original strand, 10602765 - 10603354
Alignment:
| Q |
19 |
gaaacaacagctacaatggaaacattccacaagaattgggtcgtttgtcaaaattagggtatctccttctactcaacaactcgttggttggggaatttcc |
118 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10602765 |
gaaataacagcttcaatggaaacattccacaagaattgggtcgtttgtcaaaattaaggtatctccttctactcaacaactcgttggttggggaatttcc |
10602864 |
T |
|
| Q |
119 |
tataaacttgacaaagtgctatgagctcaaaaccatagacttggaaggaaacaatttgattggtaaattacctagccaaattggttctcttcaaaagctt |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10602865 |
tataaacttgacaaagtgctatgagctcaaaaccatagacttagaaggaaacaaatttattggtaaattacctagccaaattggttctcttcaaaagctt |
10602964 |
T |
|
| Q |
219 |
caaaatttcttcattgagagaaacaatttatccggaaaaatcccaccatccataggtaatctttcatcccttgatattttatcgatcagttataataact |
318 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||| |
|
|
| T |
10602965 |
caaaatttcttcatcgagagaaacaatttatccggaaaaatcccaccatcaataggtaatctttcatcccttgctattttatcaatcggttataataact |
10603064 |
T |
|
| Q |
319 |
tggtgggaaatattccacaggaaatgtgcttcctaaaacagttatgggctatagcagtgcatgccaacaatttgtctggtacatttccttcttgtcttta |
418 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10603065 |
tgatgggaaatattccacaagaaatgtgcttcctaaaacagttatgggctatagcaatggatgtcaacaaattgtctggtacatttccttcttgtcttta |
10603164 |
T |
|
| Q |
419 |
taatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccacactctccccaatctccaatatttt |
518 |
Q |
| |
|
||||||| |||||||| |||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10603165 |
taatatgacatctcttcaagtgatctcagttgcagtgaatagctttagtggctctcttccacccaatatgttccacactctccccaatctccaatatttt |
10603264 |
T |
|
| Q |
519 |
acggtcggatcaaataaattctcaggtcgaatccctacttcaatttcaaatgcttcttctttgacattatttgaaatcggtgacaaccat |
608 |
Q |
| |
|
|| || ||||||||| |||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10603265 |
acagttggatcaaatcaattcttaggtccaatccccacttcaatttcgaatgcttcttctttgacattatttgaaattggtgacaaccat |
10603354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 32 - 502
Target Start/End: Complemental strand, 10590611 - 10590141
Alignment:
| Q |
32 |
caatggaaacattccacaagaattgggtcgtttgtcaaaattagggtatctccttctactcaacaactcgttggttggggaatttcctataaacttgaca |
131 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||| | ||| | |||||| ||||||||| ||||||| ||||||||| ||||||||||| |
|
|
| T |
10590611 |
caatggaaacattccacaagagttgggtcgtttgtcaagattaagatattttcttctatccaacaactctctggttggagaatttcctttaaacttgaca |
10590512 |
T |
|
| Q |
132 |
aagtgctatgagctcaaaaccatagacttggaaggaaacaatttgattggtaaattacctagccaaattggttctcttcaaaagcttcaaaatttcttca |
231 |
Q |
| |
|
|| |||| ||||||||||| | ||||||| ||||||||||| | |||| ||| ||||||||||| |||| ||||||||||||||||| | ||||| | |
|
|
| T |
10590511 |
aactgctctgagctcaaaagcgtagacttagaaggaaacaaactttttggaaaaatacctagccaatttggctctcttcaaaagcttcacattttctata |
10590412 |
T |
|
| Q |
232 |
ttgagagaaacaatttatccggaaaaatcccaccatccataggtaatctttcatcccttgatattttatcgatcagttataataacttggtgggaaatat |
331 |
Q |
| |
|
| | | |||||||||||| ||||||||||||||||||||| | ||||||||||| ||| ||||||| || || |||||||||||||||| |||||||| |
|
|
| T |
10590411 |
tcggaacaaacaatttatctggaaaaatcccaccatccataaggaatctttcatctcttaatattttttcaattggttataataacttggtaggaaatat |
10590312 |
T |
|
| Q |
332 |
tccacaggaaatgtgcttcctaaaacagttatgggctatagcagtgcatgccaacaatttgtctggtacatttccttcttgtctttataatatgtcatct |
431 |
Q |
| |
|
||||| ||||| |||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10590311 |
tccacgtgaaatttgcttcttaaaacagttgaagtttatagcagtgcatgccaacaaattgtctggtacatttctttcttgtctttataatatgtcatct |
10590212 |
T |
|
| Q |
432 |
cttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccacactctccc |
502 |
Q |
| |
|
|||| | ||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||||||| |
|
|
| T |
10590211 |
cttacggggatctcagttgcagcgaatagctttagtggctctcttccgcccaatatgttcaacactctccc |
10590141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 36 - 502
Target Start/End: Original strand, 10579036 - 10579502
Alignment:
| Q |
36 |
ggaaacattccacaagaattgggtcgtttgtcaaaattagggtatctccttctactcaacaactcgttggttggggaatttcctataaacttgacaaagt |
135 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| |||| | ||| | |||||| ||||||||| ||||||| ||||||||| ||| ||||||||| | |
|
|
| T |
10579036 |
ggaaacattccacaagaaacgggtcgtttatcacgattaagatattttcttctatccaacaactctctggttggagaatttcctttaaccttgacaaact |
10579135 |
T |
|
| Q |
136 |
gctatgagctcaaaaccatagacttggaaggaaacaatttgattggtaaattacctagccaaattggttctcttcaaaagcttcaaaatttcttcattga |
235 |
Q |
| |
|
||| ||||||||||| | ||||||| ||||||||||| | |||| ||| ||||||||||| |||| ||||||||||||||||| | ||||| || | |
|
|
| T |
10579136 |
gctctgagctcaaaagcgtagacttagaaggaaacaaactttttggaaaaatacctagccaatttggctctcttcaaaagcttcacattttctatatcgg |
10579235 |
T |
|
| Q |
236 |
gagaaacaatttatccggaaaaatcccaccatccataggtaatctttcatcccttgatattttatcgatcagttataataacttggtgggaaatattcca |
335 |
Q |
| |
|
| |||||||||||| ||||||||||||||||||||| | ||||||||||| ||| ||||||| || || |||||||||||||||| |||||||||||| |
|
|
| T |
10579236 |
aacaaacaatttatcgggaaaaatcccaccatccataaggaatctttcatctcttaatattttttcaattggttataataacttggtaggaaatattcca |
10579335 |
T |
|
| Q |
336 |
caggaaatgtgcttcctaaaacagttatgggctatagcagtgcatgccaacaatttgtctggtacatttccttcttgtctttataatatgtcatctctta |
435 |
Q |
| |
|
| ||||| |||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10579336 |
cgtgaaatttgcttcttaaaacagttgaagtttatagcagtgcatgccaacaagttgtctggtacatttctttcttgtctttataatatgtcatctctta |
10579435 |
T |
|
| Q |
436 |
aagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccacactctccc |
502 |
Q |
| |
|
| |||||||||| |||||||| ||||| ||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
10579436 |
cggggatctcagttgaagcgaatagctttagtggttctcttccacccaatatgttcaacactctccc |
10579502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 577
Target Start/End: Original strand, 7191404 - 7191575
Alignment:
| Q |
406 |
cttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccacactctccccaa |
505 |
Q |
| |
|
|||||||||||||||||||||||||||||| | || || | |||| ||||| |||| ||| ||||||||||||||||||||| |||| ||| |||| |
|
|
| T |
7191404 |
cttcttgtctttataatatgtcatctcttactttcatttccgctgcattcaataattttaatggatctcttccacccaatatgttcaacaccctctccaa |
7191503 |
T |
|
| Q |
506 |
tctccaatattttacggtcggatcaaataaattctcaggtcgaatccctacttcaatttcaaatgcttcttc |
577 |
Q |
| |
|
||| |||||||| | ||||| |||| ||||||||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
7191504 |
tcttcaatatttagcaatcggaggaaatcaattctcaggtacaatccctatttccatttcaaatgcttcttc |
7191575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 577
Target Start/End: Complemental strand, 10661906 - 10661724
Alignment:
| Q |
395 |
tggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccac |
494 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| | | |||||||||| | | ||| | |||| ||| ||||||||| ||||||||||| || |
|
|
| T |
10661906 |
tggttcatttccttcttgtctttataatatgtcatctctaactgggatctcagttggacccaatgattttaatggatctcttccatccaatatgttcaac |
10661807 |
T |
|
| Q |
495 |
actctccccaatctccaatattttacggtcggatcaaataaattctcaggtcgaatccctacttcaatttcaaatgcttcttc |
577 |
Q |
| |
|
|| ||| ||||||| |||||||| | ||||| |||| |||| |||||| |||||||| ||| ||| ||||||||||||| |
|
|
| T |
10661806 |
accctctccaatcttcaatatttcgcaatcggaagaaatgaattttcaggtacaatccctatttccattgcaaatgcttcttc |
10661724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 508
Target Start/End: Complemental strand, 19607698 - 19607573
Alignment:
| Q |
383 |
caacaatttgtctggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccaccc |
482 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||| |||||||||||||||| | || |||| |||||| ||| |||||| |||||||||||| | |
|
|
| T |
19607698 |
caacaaattatctggtacatttccttcttgtcttttcaatatgtcatctcttactatgatatcagctgcagctaatcactttaatggctctcttcctcat |
19607599 |
T |
|
| Q |
483 |
aatatgttccacactctccccaatct |
508 |
Q |
| |
|
|| |||||| | ||||||| |||||| |
|
|
| T |
19607598 |
aacatgttcaatactctccgcaatct |
19607573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 396 - 592
Target Start/End: Complemental strand, 9838148 - 9837952
Alignment:
| Q |
396 |
ggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttccaca |
495 |
Q |
| |
|
||||||||||| ||||||| || |||||||||||||||| | | |||||| |||| ||| |||||| ||||||||||||| | ||||||||||| | |
|
|
| T |
9838148 |
ggtacatttccaccttgtctctacaatatgtcatctcttacattgatctcaacagcagataatcactttagtggctctcttccatcaaatatgttccaaa |
9838049 |
T |
|
| Q |
496 |
ctctccccaatctccaatattttacggtcggatcaaataaattctcaggtcgaatccctacttcaatttcaaatgcttcttctttgacattatttga |
592 |
Q |
| |
|
||||||| ||||||| || |||| | ||| |||||| ||| |||| |||||| ||||| ||| |||||||||| ||||||||| |||||| |
|
|
| T |
9838048 |
ctctccctaatctccgatcttttgaaataggagggaataaaatcttaggttcaatcccaacttccattgtaaatgcttctactttgacatcatttga |
9837952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 577
Target Start/End: Complemental strand, 10654025 - 10653841
Alignment:
| Q |
393 |
tctggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttcc |
492 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| || ||||| |||| ||| ||||||||| | ||||||||| |
|
|
| T |
10654025 |
tctggtacatttcattcttgtttttataatatgtcatctcttacttatatctcagtaacactcaataaatttaatggatctcttccatcaaatatgttca |
10653926 |
T |
|
| Q |
493 |
acactctccccaatctccaatattttacggtcggatcaaataaattctcaggtcgaatccctacttcaatttcaaatgcttcttc |
577 |
Q |
| |
|
|||| || ||||||| |||| ||| | | ||| ||| ||||||||||| |||||||| ||| ||| ||||||||||||| |
|
|
| T |
10653925 |
acaccctttccaatcttcaatgtttctatattgcatccaatcaattctcaggtacaatccctatttccattgcaaatgcttcttc |
10653841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 512
Target Start/End: Original strand, 10594144 - 10594263
Alignment:
| Q |
393 |
tctggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttcc |
492 |
Q |
| |
|
|||||||||||||| |||||||| | |||||| ||||||||| | ||||||| |||| |||| ||| |||||||||||||||| | ||||||| |
|
|
| T |
10594144 |
tctggtacatttccaccttgtcttcacaatatgacatctcttactggcatctcagccccagcaaatagcttcggtggctctcttccacccgacatgttcc |
10594243 |
T |
|
| Q |
493 |
acactctccccaatctccaa |
512 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
10594244 |
aaactctccccaatctccaa |
10594263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 509
Target Start/End: Complemental strand, 10748847 - 10748722
Alignment:
| Q |
384 |
aacaatttgtctggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccaccca |
483 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||| || | ||||| | | | ||||| |||||||||||||||||| ||| |
|
|
| T |
10748847 |
aacaatttgtctggtatgtttccttcttgtctttataatatctcatcactaactcaactctcactaaccgaaaataaatttattggctctcttccatcca |
10748748 |
T |
|
| Q |
484 |
atatgttccacactctccccaatctc |
509 |
Q |
| |
|
| ||||| ||||||||||||||||| |
|
|
| T |
10748747 |
acttgttcaacactctccccaatctc |
10748722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 502
Target Start/End: Original strand, 10549179 - 10549288
Alignment:
| Q |
393 |
tctggtacatttccttcttgtctttataatatgtcatctcttaaagttatctcagttgcagcgaataactttattggctctcttccacccaatatgttcc |
492 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||| | ||||||| |||| | ||| | ||| |||||| |||||| |||| ||||| |
|
|
| T |
10549179 |
tctggtacatttcctttgtgtctttacaatatgtcatctcttactatgatctcagctgcatcaaatcagtttgatggctcacttccatccaacatgttta |
10549278 |
T |
|
| Q |
493 |
acactctccc |
502 |
Q |
| |
|
|||||||||| |
|
|
| T |
10549279 |
acactctccc |
10549288 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 455 - 513
Target Start/End: Complemental strand, 10218487 - 10218429
Alignment:
| Q |
455 |
gaataactttattggctctcttccacccaatatgttccacactctccccaatctccaat |
513 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||| || | |||||||||||||||| |
|
|
| T |
10218487 |
gaataacttttatggctctcttccacccaacatgtttcatgccctccccaatctccaat |
10218429 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 33; Significance: 0.000000004; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 575
Target Start/End: Original strand, 12930736 - 12930844
Alignment:
| Q |
467 |
tggctctcttccacccaatatgttccacactctccccaatctccaatattttacggtcggatcaaataaattctcaggtcgaatccctacttcaatttca |
566 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||||| | ||| || | | | | ||||| |||||||||||| |||||||||||| ||| || |
|
|
| T |
12930736 |
tggctcttttccacccaacatgttccacaccctccccaatattcaaatattcgcttttgcagcaaatcaattctcaggtccaatccctacttcgattgca |
12930835 |
T |
|
| Q |
567 |
aatgcttct |
575 |
Q |
| |
|
||||||||| |
|
|
| T |
12930836 |
aatgcttct |
12930844 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 12898025 - 12898066
Alignment:
| Q |
467 |
tggctctcttccacccaatatgttccacactctccccaatct |
508 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
12898025 |
tggctcttttccacccaacatgttccacaccctccccaatct |
12898066 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 12905647 - 12905688
Alignment:
| Q |
467 |
tggctctcttccacccaatatgttccacactctccccaatct |
508 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
12905647 |
tggctcttttccacccaacatgttccacaccctccccaatct |
12905688 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 12956538 - 12956579
Alignment:
| Q |
467 |
tggctctcttccacccaatatgttccacactctccccaatct |
508 |
Q |
| |
|
||||||| |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
12956538 |
tggctcttttccacccaacatgttccacaccctccccaatct |
12956579 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 12897941 - 12897993
Alignment:
| Q |
383 |
caacaatttgtctggtacatttccttcttgtctttataatatgtcatctctta |
435 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||| ||||| |||| |
|
|
| T |
12897941 |
caacaatttgtccggtaagattccttcttgtctttataatatctcatcactta |
12897993 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 17925166 - 17925114
Alignment:
| Q |
456 |
aataactttattggctctcttccacccaatatgttccacactctccccaatct |
508 |
Q |
| |
|
||||||||| | |||||| |||||||||| || |||||||| ||||||||||| |
|
|
| T |
17925166 |
aataactttctcggctcttttccacccaacatcttccacaccctccccaatct |
17925114 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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