View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6861_low_8 (Length: 351)

Name: NF6861_low_8
Description: NF6861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6861_low_8
NF6861_low_8
[»] scaffold0021 (11 HSPs)
scaffold0021 (11-351)||(95798-96138)
scaffold0021 (17-351)||(49187-49525)
scaffold0021 (8-351)||(39258-39600)
scaffold0021 (9-328)||(50265-50583)
scaffold0021 (35-351)||(34511-34826)
scaffold0021 (8-85)||(41063-41140)
scaffold0021 (10-82)||(40899-40971)
scaffold0021 (9-85)||(51404-51480)
scaffold0021 (9-85)||(51576-51652)
scaffold0021 (264-351)||(96207-96294)
scaffold0021 (9-83)||(40724-40798)
[»] scaffold0055 (17 HSPs)
scaffold0055 (9-351)||(12178-12512)
scaffold0055 (9-351)||(34401-34742)
scaffold0055 (17-351)||(74581-74919)
scaffold0055 (9-351)||(53573-53912)
scaffold0055 (17-351)||(19486-19824)
scaffold0055 (17-351)||(55909-56247)
scaffold0055 (17-351)||(43195-43532)
scaffold0055 (9-351)||(35525-35859)
scaffold0055 (9-85)||(11191-11267)
scaffold0055 (9-85)||(11363-11439)
scaffold0055 (9-85)||(30004-30080)
scaffold0055 (9-85)||(18699-18775)
scaffold0055 (9-85)||(30178-30254)
scaffold0055 (9-85)||(36570-36646)
scaffold0055 (9-85)||(44232-44308)
scaffold0055 (9-85)||(56957-57033)
scaffold0055 (9-85)||(75619-75695)
[»] scaffold0052 (16 HSPs)
scaffold0052 (9-351)||(72023-72357)
scaffold0052 (9-351)||(61322-61663)
scaffold0052 (17-351)||(3368-3706)
scaffold0052 (17-351)||(17893-18231)
scaffold0052 (17-351)||(41384-41722)
scaffold0052 (17-326)||(53515-53828)
scaffold0052 (17-181)||(30306-30474)
scaffold0052 (9-85)||(65985-66061)
scaffold0052 (9-85)||(73096-73172)
scaffold0052 (9-85)||(73268-73344)
scaffold0052 (9-85)||(2581-2657)
scaffold0052 (9-85)||(17117-17193)
scaffold0052 (9-85)||(40598-40674)
scaffold0052 (9-85)||(42522-42598)
scaffold0052 (9-85)||(54561-54637)
scaffold0052 (9-85)||(65811-65887)
[»] chr2 (1 HSPs)
chr2 (155-351)||(30422382-30422578)
[»] scaffold0515 (2 HSPs)
scaffold0515 (9-257)||(11514-11760)
scaffold0515 (9-85)||(10639-10715)
[»] scaffold0152 (6 HSPs)
scaffold0152 (9-257)||(19084-19330)
scaffold0152 (9-257)||(33382-33628)
scaffold0152 (9-226)||(37941-38156)
scaffold0152 (9-85)||(28259-28335)
scaffold0152 (9-85)||(37035-37111)
scaffold0152 (9-85)||(18207-18283)
[»] chr6 (1 HSPs)
chr6 (9-179)||(9477454-9477623)
[»] chr5 (1 HSPs)
chr5 (10-168)||(21098509-21098666)
[»] scaffold1084 (1 HSPs)
scaffold1084 (9-85)||(2879-2955)


Alignment Details
Target: scaffold0021 (Bit Score: 241; Significance: 1e-133; HSPs: 11)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 11 - 351
Target Start/End: Original strand, 95798 - 96138
Alignment:
Q  11 acatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  95798 acatcataaggacctccagcgagaaattttagcaaatttgcacgcgggattcgttacttgcgaatattttaagcgtcattagccgaagaaacgaaaaagc 95897  T
Q  111 aaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaac 210  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||| | ||| |||||  | |||||||||||||    
T  95898 aaaccccccgtttggctcccgaattgcaaaatgtcaccttgccttggcttggcacgggcaggggaaggtctagcccaagccgcaaaaaaaaatttcaaac 95997  T
Q  211 cggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggcc 310  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||    
T  95998 cggtatgaccttaataacacgggcgcgcaggcgcgctcgaggaatttctgccccccgacgtggtttggcccgagcacgtgctcccgacgtgatttggccc 96097  T
Q  311 cccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
     ||||||||||||||||||  ||||||||||||||||||||    
T  96098 accgcaaaaatttcgatagtacgggagcgcgctggagattt 96138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 49187 - 49525
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49187 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 49286  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggc-----ttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
    || || ||||||| ||||||||||||||||||||||| ||||     ||||||||||||||||||||||| |||||||||||| | ||||| | ||||||    
T  49287 cc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaacc 49385  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  49386 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccagcgagatttggccta 49485  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  49486 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 49525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 351
Target Start/End: Original strand, 39258 - 39600
Alignment:
Q  8 tggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaa 107  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  39258 tggacatcaagaggacctccagcgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagctttattagccgaagaaacgaaaa 39357  T
Q  108 agcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcg-gagaaaaatttc 206  Q
    |||||| |||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||  | |||||||||    
T  39358 agcaaa-cccctgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctcgtccaggccacgaaacaaaaatttc 39456  T
Q  207 aaaccggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttg 306  Q
     |||||||||||||||||||   |||| |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  39457 -aaccggtatgaccttaataatacgggtgcgcaggctcgcgcgaggaatttctgccccccgacgtggtttggccagagcacgtgctcccggcgtgatttg 39555  T
Q  307 ggcccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    | |  || |||||||||||||| | |||| |||||||||||||||    
T  39556 gcctaccacaaaaatttcgataacacgggcgcgcgctggagattt 39600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 9 - 328
Target Start/End: Original strand, 50265 - 50583
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||| ||||| |||||| |||| ||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50265 ggacatcaaaaggatctccagagagagattttggcaattatgcacgcggaaatcgttaactgcgaatattttaagcgtcattagctgaagaaacgaaaaa 50364  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcg-gagaaaaatttca 207  Q
    ||||| ||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| | |  | |||||||||     
T  50365 gcaaa-cccccgtttggctcccgaattgcaacatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggctgagaaacaaaaatttc- 50462  T
Q  208 aaccggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgg 307  Q
    |||||||||||||||||||   |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  50463 aaccggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttctgccccccgacgtagtttggcccgagcacgtgctcccggcgtgatttgg 50562  T
Q  308 gcccccgcaaaaatttcgata 328  Q
     |  || ||||||||||||||    
T  50563 cctaccacaaaaatttcgata 50583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 35 - 351
Target Start/End: Original strand, 34511 - 34826
Alignment:
Q  35 aattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccccccgtatggctccggaat 134  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||    
T  34511 aattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcttcattagccgaagaaacgaaaaagcaaacccccc-tttggctcccgaat 34609  T
Q  135 tgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcg-gagaaaaatttcaaaccggtatgaccttaatatatcggg 233  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||  | ||| ||||| |||||||| |||||| |||   ||||    
T  34610 tgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctaggccaggccgcgaaacaaatatttc-aaccggtacgaccttcataatacggg 34708  T
Q  234 cgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggcccccgcaaaaatttcgatagcccg 333  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |  || |||||||||||||| |  |    
T  34709 tgcgcaggcgcgcgcgaggaatttctgccccccgacgtggtttggcccgagcacgtgctcccggtgtgatttggcctaccacaaaaatttcgataacgtg 34808  T
Q  334 ggagcgcgctggagattt 351  Q
    || | |||||||||||||    
T  34809 ggtgtgcgctggagattt 34826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 41063 - 41140
Alignment:
Q  8 tggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    |||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  41063 tggacatcataaggaccttcaccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 41140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 40899 - 40971
Alignment:
Q  10 gacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaa 82  Q
    |||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  40899 gacatcataaggaccttcaccgagaaattttggcaagtttgcacgcgggaatcgttaactgcgaatattttaa 40971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 51404 - 51480
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  51404 ggacatcataaggaccttcactgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 51480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 51576 - 51652
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  51576 ggacatcataaggaccttcaccgagaaattttggcaattttgcatgcgggaatcgttaactgcgaatattttaagcg 51652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 351
Target Start/End: Original strand, 96207 - 96294
Alignment:
Q  264 cccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggcccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    ||||| ||| |||||||||||||||||||||||||||| ||| | || || |||||||||||||||  ||||||||||||||||||||    
T  96207 cccgaagtgatttggcccgagcacgtgctcccggcgtgatttagcccaccacaaaaatttcgatagtacgggagcgcgctggagattt 96294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 40724 - 40798
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaag 83  Q
    ||||||||||||||||| || ||||||||||| || | |||||||| | ||||||||||||||||||||||||||    
T  40724 ggacatcataaggaccttcaccgagaaattttggcgattttgcacgagagaatcgttaactgcgaatattttaag 40798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 233; Significance: 1e-129; HSPs: 17)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 9 - 351
Target Start/End: Complemental strand, 12512 - 12178
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12512 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattcgccgaagaaacgaaaaa 12413  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  12412 gcaaaccccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcgaagaaaaatttcaa 12313  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttggg 308  Q
    || ||||| |||| |||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||       
T  12312 acgggtatcacctaaata-at-------acaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgtgatttttc 12221  T
Q  309 cccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || || ||||||||| |||||| ||||||||||||||||||||    
T  12220 ccaccacaaaaattttgatagcacgggagcgcgctggagattt 12178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 351
Target Start/End: Original strand, 34401 - 34742
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34401 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 34500  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
    |||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||| | |||    
T  34501 gcaaaccccc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaa 34599  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttggg 308  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| | |||||     
T  34600 accggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgcccctcgacgtagtttggcccgagcacgtgctccccgcgagatttggc 34699  T
Q  309 cccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    |  || |||||||||||| | | |||| |||||||||||||||    
T  34700 ctaccacaaaaatttcgacaacgcgggcgcgcgctggagattt 34742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 74581 - 74919
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  74581 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 74680  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggc-----ttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
    || || ||||||| ||||||||||||||||||||||| ||||     ||||||||||||||||||||||| |||||||||||| | ||||| | ||||||    
T  74681 cc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaacc 74779  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  74780 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 74879  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  74880 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 74919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 9 - 351
Target Start/End: Original strand, 53573 - 53912
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53573 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 53672  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
    |||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||| | |||    
T  53673 gcaaaccccc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaa 53771  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttggg 308  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| | |||||     
T  53772 accggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgcccctcgacgtagtttggcccgagcacgtgctccccgcgagatttgg- 53870  T
Q  309 cccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
     ||   | |||||||||| | | |||| |||||||||||||||    
T  53871 -cctacccaaaatttcgacaacgcgggcgcgcgctggagattt 53912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 351
Target Start/End: Complemental strand, 19824 - 19486
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19824 taaggacctccagcgagaaattttggaaaatttgcacgcgggattcgttaattgccaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 19725  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggcttggc-----atgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
    || || ||||||| ||||||||||||||||||||||| |||||||||     |||||||||||||||||| |||||||||||| | ||||| | ||||||    
T  19724 cc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaacc 19626  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  19625 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 19526  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  19525 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 19486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 55909 - 56247
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55909 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 56008  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggc-----ttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
     | || ||||||| ||||||||||||||||||||||| ||||     ||||||||||||||||||||| | |||||||||||| | ||||| | ||||||    
T  56009 tc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtgtagtccaggccgcgaaaaaaaaatccaaacc 56107  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  56108 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 56207  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  56208 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 56247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 43195 - 43532
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  43195 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 43293  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
    ||||| ||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| |||||||||||| | ||||| | || |||    
T  43294 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccagacc 43393  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  43394 ggtatgaccttaataatacgggtgcgca-gcacgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 43492  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  43493 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 43532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 351
Target Start/End: Original strand, 35525 - 35859
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35525 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 35624  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||| |||||||||||       ||||||||| |||||||||||| | ||||| | |||    
T  35625 gcaaa-cccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcat-------ggaaggtctagtccaggccgcgaaaaaaaaatccaa 35716  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttggg 308  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| | |||||     
T  35717 accggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgcccctcgaggtggtttggcccgagcacgtgctccccgcgagatttggc 35816  T
Q  309 cccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    |  || |||||||||||| | | |||| |||||||||||||||    
T  35817 ctaccacaaaaatttcgacaacgcgggcgcgcgctggagattt 35859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 11267 - 11191
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  11267 ggacatcataaggaccttcaccgagaaattttggcaattttgcatgcgggaatcgttaactgcgaatattttaagcg 11191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 11439 - 11363
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  11439 ggacatcataaggaccttcactgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30080 - 30004
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  30080 ggacatcataaggaccttcaccgagaaattttggcaattttgcacgcgggaatcgtaaactgcgaatattttaagcg 30004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 18775 - 18699
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  18775 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 18699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30254 - 30178
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||    
T  30254 ggacatcataaggaccttcaccgagaaatttgggcaattttgcacgcgggaatcgtcaactgcgaatattctaagcg 30178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 36570 - 36646
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  36570 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 36646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 44232 - 44308
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  44232 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 44308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 56957 - 57033
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  56957 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 57033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 75619 - 75695
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| |  ||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||    
T  75619 ggacatcataaggaccttctccgagaaattttggcaattttgcacgtgggaatcgttaactgcgaatatcttaagcg 75695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 233; Significance: 1e-129; HSPs: 16)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 9 - 351
Target Start/End: Original strand, 72023 - 72357
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  72023 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattcgccgaagaaacgaaaaa 72122  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  72123 gcaaaccccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcgaagaaaaatttcaa 72222  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttggg 308  Q
    || ||||| |||| |||| ||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||       
T  72223 acgggtatcacctaaata-at-------acaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgtgatttttc 72314  T
Q  309 cccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || || ||||||||| |||||| ||||||||||||||||||||    
T  72315 ccaccacaaaaattttgatagcacgggagcgcgctggagattt 72357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 351
Target Start/End: Complemental strand, 61663 - 61322
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  61663 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 61564  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
    |||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||| | |||    
T  61563 gcaaaccccc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaa 61465  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttggg 308  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| | |||||     
T  61464 accggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgcccctcgacgtagtttggcccgagcacgtgctccccgcgagatttggc 61365  T
Q  309 cccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    |  || |||||||||||| | | |||| |||||||||||||||    
T  61364 ctaccacaaaaatttcgacaacgcgggcgcgcgctggagattt 61322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 351
Target Start/End: Complemental strand, 3706 - 3368
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3706 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 3607  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggcttggc-----atgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
    || || ||||||| ||||||||||||||||||||||| |||||||||     |||||||||||||||||| |||||||||||| | ||||| | ||||||    
T  3606 cc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaacc 3508  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  3507 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 3408  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  3407 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 3368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 351
Target Start/End: Complemental strand, 18231 - 17893
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18231 taaggacctccagcgagaaattttggaaaatttgcacgcgggattcgttaattgccaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 18132  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggcttggc-----atgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
    || || ||||||| ||||||||||||||||||||||| |||||||||     |||||||||||||||||| |||||||||||| | ||||| | ||||||    
T  18131 cc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaacc 18033  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  18032 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 17933  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  17932 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 17893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 351
Target Start/End: Complemental strand, 41722 - 41384
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41722 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 41623  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggcttggc-----atgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
     | || ||||||| ||||||||||||||||||||||| |||||||||     |||||||||||||||| | |||||||||||| | ||||| | ||||||    
T  41622 tc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtgtagtccaggccgcgaaaaaaaaatccaaacc 41524  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  41523 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 41424  T
Q  312 ccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    || |||||||||||| | | |||| |||||||||||||||    
T  41423 ccacaaaaatttcgacaacgcgggcgcgcgctggagattt 41384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 326
Target Start/End: Original strand, 53515 - 53828
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53515 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 53614  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctggc-----ttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaacc 211  Q
     | || ||||||| ||||||||||||||||||||||| ||||     ||||||||||||||||||||||| |||||||||||| | ||||| | ||||||    
T  53615 tc-gtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaacc 53713  T
Q  212 ggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggccc 311  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |      
T  53714 ggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaatttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggccta 53813  T
Q  312 ccgcaaaaatttcga 326  Q
    || ||||||||||||    
T  53814 ccacaaaaatttcga 53828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 30306 - 30474
Alignment:
Q  17 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 116  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30306 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 30404  T
Q  117 cccgtatggctccggaattgcaaaatgccaccttgccctgg-----cttggcatgggcaggggaaggtct 181  Q
    ||||| ||||||| ||||||||||||||||||||||| |||     ||||||||||||||||||||||||    
T  30405 cccgtttggctcccgaattgcaaaatgccaccttgccttggctaaacttggcatgggcaggggaaggtct 30474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 65985 - 66061
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  65985 ggacatcataaggaccttcaccgagaaattttggcaattttgcacgcgggaatcgtaaactgcgaatattttaagcg 66061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 73096 - 73172
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  73096 ggacatcataaggaccttcactgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 73172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 73268 - 73344
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  73268 ggacatcataaggaccttcaccgagaaattttggcaattttgcatgcgggaatcgttaactgcgaatattttaagcg 73344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 2657 - 2581
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  2657 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 2581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 17193 - 17117
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  17193 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 17117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 40674 - 40598
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  40674 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 40598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 42522 - 42598
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| |  ||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||    
T  42522 ggacatcataaggaccttctccgagaaattttggcaattttgcacgtgggaatcgttaactgcgaatatcttaagcg 42598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 54561 - 54637
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  54561 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 54637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 65811 - 65887
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||    
T  65811 ggacatcataaggaccttcaccgagaaatttgggcaattttgcacgcgggaatcgtcaactgcgaatattctaagcg 65887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 155 - 351
Target Start/End: Original strand, 30422382 - 30422578
Alignment:
Q  155 tggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaaaccggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaa 254  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||||| | |||||||||||||||||||||   |||| ||||||||||||||||||||    
T  30422382 tggcttggcatgggcaggggaaggtctagtccaggccgcgaaaaaaaaatccaaaccggtatgaccttaataatacgggtgcgcaggcgcgcgcgaggaa 30422481  T
Q  255 tttccgccccccgacgtggtttggcccgagcacgtgctcccggcgtggtttgggcccccgcaaaaatttcgatagcccgggagcgcgctggagattt 351  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||| |  || |||||||||||| | | |||| |||||||||||||||    
T  30422482 tttccgccccccgacgtggtttggcccgagcacgtgctccccgcgagatttggcctaccacaaaaatttcgacaacgcgggcgcgcgctggagattt 30422578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 11760 - 11514
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  11760 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 11661  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
     |||| ||||  | ||||||| ||||| ||||||| | ||||||| ||||||||||||||||  |||||||   ||||  |||| | | ||||||||| |    
T  11660 acaaa-ccccaatttggctcccgaattccaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggttgagtcccagccgtgaacaaaaatttc-a 11563  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaattt 257  Q
    | ||||||||||||||||   | |  |||||||||||||||||||||||    
T  11562 atcggtatgaccttaataatacagatgcgcaggcgcgcgcgaggaattt 11514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 10715 - 10639
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| ||||||| ||||||| |||||||||||||||||    
T  10715 ggacatcataaggacctccaccgagaaattttggcgtttttgctcgcgggattcgttaagtgcgaatattttaagcg 10639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 93; Significance: 3e-45; HSPs: 6)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 19330 - 19084
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  19330 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 19231  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
     |||| ||||  | ||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||   ||||  |||| | | ||||||||| |    
T  19230 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggttgagtcccagccgtgaacaaaaatttc-a 19133  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaattt 257  Q
    | ||||||||||||||||   |    |||||||||||||||||||||||    
T  19132 atcggtatgaccttaataatacatatgcgcaggcgcgcgcgaggaattt 19084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 9 - 257
Target Start/End: Original strand, 33382 - 33628
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  33382 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 33481  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
     |||| ||||  | ||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||   ||||  |||| | | ||||||||| |    
T  33482 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggttgagtcccagccgtgaacaaaaatttc-a 33579  T
Q  209 accggtatgaccttaatatatcgggcgcgcaggcgcgcgcgaggaattt 257  Q
    | ||||||||||||||||   | |  ||||| |||||||||||||||||    
T  33580 atcggtatgaccttaataatacagatgcgcaagcgcgcgcgaggaattt 33628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 38156 - 37941
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  38156 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 38057  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggtccaggccgcggagaaaaatttcaa 208  Q
     |||| ||||  | ||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||   ||||  |||| | | ||||||||| |    
T  38056 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggttgagtcccagccgtgaacaaaaatttc-a 37959  T
Q  209 accggtatgaccttaata 226  Q
    | ||||||||||||||||    
T  37958 atcggtatgaccttaata 37941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 28335 - 28259
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| ||||||| ||||||| |||||||||||||||||    
T  28335 ggacatcataaggacctccaccgagaaattttggcgtttttgctcgcgggattcgttaagtgcgaatattttaagcg 28259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 37111 - 37035
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| ||||||| ||||||| |||||||||||||||||    
T  37111 ggacatcataaggacctccaccgagaaattttggcgtttttgctcgcgggattcgttaagtgcgaatattttaagcg 37035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 18283 - 18207
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| | ||||| ||||||| |||||||||||||||||    
T  18283 ggacatcataaggacctccaccgagaaattttggcgtttttgctcacgggattcgttaagtgcgaatattttaagcg 18207  T

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Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 179
Target Start/End: Original strand, 9477454 - 9477623
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 108  Q
    |||||||||||||| ||||| ||||||| ||| |||  |||||||| ||||   ||||| | |||||||||||||||||| |||||||||||| ||||||    
T  9477454 ggacatcataaggatctccatcgagaaactttggcatttttgcacgagggatgagttaattacgaatattttaagcgtcaatagccgaagaaatgaaaaa 9477553  T
Q  109 gcaaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggt 179  Q
     |||| ||||  | ||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||    
T  9477554 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggt 9477623  T

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Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 168
Target Start/End: Original strand, 21098509 - 21098666
Alignment:
Q  10 gacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaag 109  Q
    ||||||||||||||||||| ||||||||||| |||| |||||| | | || || |||| | |||||||||||||||||| |||||||| | | ||||||     
T  21098509 gacatcataaggacctccaccgagaaattttggcaattttgcatgagagattcattaattacgaatattttaagcgtcaatagccgaatatatgaaaaaa 21098608  T
Q  110 caaaccccccgtatggctccggaattgcaaaatgccaccttgccctggcttggcatggg 168  Q
    |||| |||  || || |||| ||||||||||||||| | | | | ||||||||||||||    
T  21098609 caaa-ccctagtttgcctcccgaattgcaaaatgccgcatcgtcgtggcttggcatggg 21098666  T

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Target: scaffold1084 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1084
Description:

Target: scaffold1084; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 2955 - 2879
Alignment:
Q  9 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 85  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| |||| |||||| ||||| ||||||||||||||    
T  2955 ggacatcataaggaccttcaccgagaaattttggcaattttgcaggcggaaatcgtcaactgtgaatattttaagcg 2879  T

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