View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6863A_low_185 (Length: 249)

Name: NF6863A_low_185
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6863A_low_185
NF6863A_low_185
[»] chr1 (29 HSPs)
chr1 (24-232)||(16058267-16058478)
chr1 (44-232)||(19676598-19676790)
chr1 (44-232)||(21046022-21046214)
chr1 (64-232)||(42912936-42913105)
chr1 (44-232)||(20633604-20633799)
chr1 (64-191)||(24723347-24723475)
chr1 (64-225)||(51324398-51324560)
chr1 (64-172)||(13302849-13302958)
chr1 (64-191)||(7051918-7052046)
chr1 (64-189)||(7320590-7320716)
chr1 (44-189)||(22350646-22350791)
chr1 (64-149)||(21239045-21239130)
chr1 (67-171)||(42697732-42697837)
chr1 (64-158)||(4595849-4595944)
chr1 (64-222)||(21168831-21168989)
chr1 (126-191)||(44822079-44822145)
chr1 (67-120)||(51336479-51336532)
chr1 (60-120)||(28476726-28476786)
chr1 (67-120)||(12327742-12327795)
chr1 (67-120)||(29763631-29763684)
chr1 (67-171)||(45755468-45755573)
chr1 (67-120)||(46197744-46197797)
chr1 (60-120)||(12710867-12710927)
chr1 (91-138)||(45499374-45499421)
chr1 (60-138)||(8306588-8306666)
chr1 (108-169)||(11946391-11946453)
chr1 (67-120)||(50001476-50001529)
chr1 (157-216)||(8276079-8276139)
chr1 (157-216)||(38056762-38056822)
[»] chr3 (55 HSPs)
chr3 (27-232)||(17518829-17519038)
chr3 (27-232)||(17533691-17533900)
chr3 (60-241)||(49900608-49900790)
chr3 (44-232)||(17044853-17045045)
chr3 (64-232)||(40807883-40808052)
chr3 (51-232)||(40812720-40812901)
chr3 (44-230)||(22306556-22306746)
chr3 (44-232)||(17047013-17047205)
chr3 (60-232)||(17538993-17539166)
chr3 (64-232)||(44274305-44274474)
chr3 (60-230)||(41172363-41172534)
chr3 (44-232)||(11259318-11259510)
chr3 (83-232)||(50348041-50348191)
chr3 (64-232)||(10563596-10563764)
chr3 (44-232)||(17693954-17694146)
chr3 (72-232)||(10311415-10311575)
chr3 (60-232)||(35354489-35354662)
chr3 (44-232)||(15931481-15931672)
chr3 (44-216)||(14508749-14508926)
chr3 (93-184)||(35064566-35064658)
chr3 (64-225)||(19568204-19568366)
chr3 (60-189)||(11563654-11563785)
chr3 (64-213)||(9510912-9511062)
chr3 (64-213)||(9518887-9519037)
chr3 (64-187)||(33565018-33565143)
chr3 (64-187)||(35960924-35961049)
chr3 (24-120)||(15566744-15566843)
chr3 (64-172)||(13185842-13185951)
chr3 (67-172)||(16050875-16050980)
chr3 (66-189)||(42323969-42324094)
chr3 (60-129)||(17541425-17541494)
chr3 (67-172)||(24177735-24177840)
chr3 (174-232)||(5200277-5200335)
chr3 (170-232)||(35064683-35064745)
chr3 (71-169)||(11885560-11885658)
chr3 (67-154)||(12509349-12509436)
chr3 (68-189)||(49968859-49968981)
chr3 (90-189)||(37038978-37039080)
chr3 (67-120)||(15446867-15446920)
chr3 (67-136)||(36528851-36528920)
chr3 (24-87)||(53646012-53646078)
chr3 (64-171)||(14250078-14250185)
chr3 (25-138)||(6159387-6159503)
chr3 (65-109)||(5200240-5200284)
chr3 (112-164)||(40957186-40957238)
chr3 (64-120)||(17208524-17208580)
chr3 (110-169)||(31223887-31223945)
chr3 (24-58)||(6820229-6820263)
chr3 (67-136)||(3263962-3264031)
chr3 (67-120)||(16979912-16979965)
chr3 (118-189)||(45530652-45530725)
chr3 (68-120)||(22652773-22652825)
chr3 (60-120)||(29907639-29907699)
chr3 (60-120)||(29948805-29948865)
chr3 (60-120)||(29997959-29998019)
[»] scaffold0111 (2 HSPs)
scaffold0111 (24-225)||(12486-12691)
scaffold0111 (71-232)||(5270-5432)
[»] chr5 (25 HSPs)
chr5 (24-232)||(21299997-21300209)
chr5 (78-232)||(19921525-19921680)
chr5 (72-232)||(7484890-7485050)
chr5 (64-225)||(20566448-20566602)
chr5 (60-216)||(31622028-31622177)
chr5 (63-191)||(36508628-36508757)
chr5 (67-191)||(31456888-31457013)
chr5 (64-185)||(21617924-21618047)
chr5 (64-179)||(20469172-20469288)
chr5 (67-171)||(10954038-10954142)
chr5 (64-120)||(6551286-6551342)
chr5 (126-190)||(17876132-17876197)
chr5 (108-187)||(31251931-31252011)
chr5 (67-169)||(10774663-10774764)
chr5 (67-149)||(25249827-25249910)
chr5 (67-149)||(25313611-25313694)
chr5 (72-138)||(22111810-22111876)
chr5 (67-120)||(17011728-17011781)
chr5 (118-189)||(21405678-21405751)
chr5 (71-120)||(30616614-30616663)
chr5 (68-120)||(266038-266090)
chr5 (64-120)||(18744874-18744930)
chr5 (60-138)||(32607308-32607386)
chr5 (171-220)||(22111715-22111764)
chr5 (44-120)||(23199180-23199259)
[»] scaffold1941 (1 HSPs)
scaffold1941 (64-232)||(25-194)
[»] chr2 (37 HSPs)
chr2 (64-232)||(24516073-24516242)
chr2 (60-232)||(17307373-17307546)
chr2 (60-235)||(5031121-5031297)
chr2 (44-232)||(24780813-24781005)
chr2 (44-232)||(9975816-9976008)
chr2 (67-232)||(40912207-40912373)
chr2 (60-232)||(19201192-19201365)
chr2 (60-219)||(22251440-22251600)
chr2 (44-232)||(24436535-24436727)
chr2 (60-232)||(2523739-2523912)
chr2 (72-232)||(37270587-37270747)
chr2 (105-232)||(27484514-27484642)
chr2 (116-232)||(36841151-36841268)
chr2 (64-189)||(25142133-25142260)
chr2 (67-191)||(357809-357934)
chr2 (64-191)||(1383539-1383667)
chr2 (46-225)||(27852561-27852741)
chr2 (24-191)||(22501897-22502070)
chr2 (24-191)||(22509831-22510004)
chr2 (64-189)||(3539766-3539893)
chr2 (24-116)||(149454-149549)
chr2 (67-149)||(25046088-25046171)
chr2 (64-184)||(22259974-22260094)
chr2 (67-171)||(5986125-5986230)
chr2 (63-179)||(14694266-14694383)
chr2 (126-190)||(24884399-24884464)
chr2 (67-168)||(44072509-44072610)
chr2 (83-169)||(18390229-18390315)
chr2 (118-189)||(19358820-19358893)
chr2 (67-120)||(21080968-21081021)
chr2 (126-189)||(18388248-18388312)
chr2 (67-142)||(25184166-25184242)
chr2 (26-133)||(12626381-12626491)
chr2 (60-138)||(23801478-23801556)
chr2 (64-120)||(21315472-21315528)
chr2 (64-120)||(21335262-21335318)
chr2 (118-169)||(39683162-39683214)
[»] chr7 (60 HSPs)
chr7 (44-232)||(12465233-12465425)
chr7 (60-225)||(12127155-12127321)
chr7 (68-232)||(20620173-20620338)
chr7 (44-232)||(8851132-8851324)
chr7 (44-232)||(12322903-12323095)
chr7 (44-232)||(13147445-13147637)
chr7 (44-232)||(11067355-11067547)
chr7 (44-232)||(12372161-12372353)
chr7 (44-232)||(32433562-32433754)
chr7 (64-232)||(14180394-14180563)
chr7 (63-232)||(20214034-20214204)
chr7 (64-232)||(20586239-20586408)
chr7 (64-232)||(46386084-46386253)
chr7 (44-232)||(16999320-16999515)
chr7 (72-232)||(10277215-10277375)
chr7 (64-232)||(24269943-24270112)
chr7 (67-191)||(47974819-47974944)
chr7 (64-225)||(48807321-48807483)
chr7 (67-172)||(35771440-35771546)
chr7 (64-189)||(15095633-15095759)
chr7 (67-172)||(12754611-12754716)
chr7 (64-172)||(14218891-14219000)
chr7 (68-225)||(33002055-33002205)
chr7 (64-189)||(13698634-13698761)
chr7 (64-189)||(8135234-8135359)
chr7 (64-189)||(15140143-15140269)
chr7 (68-168)||(16078281-16078382)
chr7 (60-129)||(44374834-44374903)
chr7 (60-129)||(44383699-44383768)
chr7 (60-120)||(4690655-4690715)
chr7 (110-225)||(13132363-13132478)
chr7 (67-172)||(4071767-4071873)
chr7 (64-188)||(15623950-15624074)
chr7 (67-154)||(10658850-10658937)
chr7 (72-196)||(25943041-25943166)
chr7 (63-154)||(36704566-36704657)
chr7 (67-172)||(15289052-15289158)
chr7 (94-187)||(12557853-12557947)
chr7 (110-169)||(36685187-36685246)
chr7 (72-138)||(13744662-13744728)
chr7 (67-120)||(18955330-18955383)
chr7 (44-120)||(19195611-19195690)
chr7 (108-187)||(41284963-41285043)
chr7 (60-138)||(8930757-8930835)
chr7 (67-189)||(11054642-11054766)
chr7 (67-120)||(18990847-18990900)
chr7 (67-120)||(29052181-29052234)
chr7 (44-120)||(43276717-43276796)
chr7 (65-133)||(16250219-16250287)
chr7 (60-120)||(38299748-38299808)
chr7 (44-114)||(18074620-18074693)
chr7 (60-138)||(58405-58483)
chr7 (60-138)||(13315074-13315152)
chr7 (64-140)||(14928285-14928362)
chr7 (64-140)||(15351751-15351828)
chr7 (67-120)||(16550004-16550057)
chr7 (67-120)||(16615605-16615658)
chr7 (64-133)||(20252178-20252247)
chr7 (64-120)||(3287744-3287800)
chr7 (60-120)||(43745656-43745716)
[»] chr6 (30 HSPs)
chr6 (44-232)||(7827859-7828051)
chr6 (44-232)||(19655204-19655396)
chr6 (44-232)||(23150260-23150452)
chr6 (64-232)||(15890708-15890877)
chr6 (67-217)||(27329980-27330131)
chr6 (67-217)||(27390720-27390871)
chr6 (44-232)||(27125450-27125642)
chr6 (44-232)||(18703451-18703647)
chr6 (44-232)||(18709386-18709582)
chr6 (64-168)||(24267801-24267905)
chr6 (64-225)||(28948468-28948631)
chr6 (71-191)||(18585733-18585854)
chr6 (64-185)||(18928614-18928737)
chr6 (62-171)||(24550162-24550271)
chr6 (64-222)||(19235021-19235179)
chr6 (68-185)||(19401028-19401146)
chr6 (68-143)||(27572122-27572198)
chr6 (64-222)||(30673398-30673550)
chr6 (157-222)||(19167926-19167992)
chr6 (67-172)||(31731903-31732009)
chr6 (67-131)||(15998878-15998942)
chr6 (64-189)||(23501601-23501728)
chr6 (24-87)||(23431400-23431466)
chr6 (67-120)||(12041619-12041672)
chr6 (64-138)||(19167849-19167923)
chr6 (67-120)||(15173452-15173505)
chr6 (60-138)||(10446199-10446277)
chr6 (63-120)||(23658089-23658146)
chr6 (118-169)||(26923709-26923761)
chr6 (72-112)||(29625191-29625231)
[»] chr4 (36 HSPs)
chr4 (60-232)||(25091540-25091713)
chr4 (64-232)||(15115109-15115278)
chr4 (60-232)||(53630466-53630639)
chr4 (68-237)||(11425825-11425995)
chr4 (63-232)||(10356431-10356601)
chr4 (64-225)||(37019564-37019726)
chr4 (60-232)||(42875684-42875857)
chr4 (60-232)||(16998412-16998585)
chr4 (60-232)||(19610211-19610384)
chr4 (72-232)||(6633541-6633701)
chr4 (72-232)||(46001535-46001695)
chr4 (64-187)||(9924085-9924210)
chr4 (64-184)||(14549695-14549816)
chr4 (64-180)||(19434555-19434672)
chr4 (64-189)||(9870440-9870568)
chr4 (64-185)||(11478649-11478772)
chr4 (67-154)||(15613056-15613143)
chr4 (67-154)||(51993527-51993614)
chr4 (67-171)||(21144-21249)
chr4 (154-220)||(26921707-26921774)
chr4 (60-120)||(2424379-2424439)
chr4 (44-120)||(10694218-10694297)
chr4 (44-120)||(10907984-10908063)
chr4 (60-133)||(25513838-25513911)
chr4 (68-120)||(35811376-35811428)
chr4 (67-149)||(21062611-21062694)
chr4 (67-171)||(32466193-32466299)
chr4 (44-120)||(9639010-9639089)
chr4 (67-124)||(14186955-14187011)
chr4 (67-120)||(15008963-15009016)
chr4 (64-120)||(16296938-16296994)
chr4 (67-142)||(40620509-40620585)
chr4 (44-98)||(19022366-19022423)
chr4 (26-87)||(33243249-33243313)
chr4 (44-120)||(12424263-12424342)
chr4 (157-216)||(9638912-9638972)
[»] scaffold0737 (1 HSPs)
scaffold0737 (44-232)||(4687-4879)
[»] scaffold1283 (1 HSPs)
scaffold1283 (60-232)||(460-633)
[»] scaffold1766 (1 HSPs)
scaffold1766 (67-232)||(695-861)
[»] scaffold1633 (1 HSPs)
scaffold1633 (60-232)||(1092-1265)
[»] scaffold0001 (3 HSPs)
scaffold0001 (44-232)||(31881-32073)
scaffold0001 (44-232)||(37188-37380)
scaffold0001 (60-232)||(77574-77747)
[»] chr8 (45 HSPs)
chr8 (44-228)||(19140656-19140843)
chr8 (64-232)||(6101749-6101918)
chr8 (78-232)||(5082222-5082377)
chr8 (68-241)||(20083638-20083812)
chr8 (44-232)||(42817880-42818072)
chr8 (60-232)||(5761421-5761593)
chr8 (72-232)||(6573060-6573221)
chr8 (60-232)||(39935999-39936175)
chr8 (72-232)||(37292593-37292753)
chr8 (72-232)||(6202664-6202824)
chr8 (64-225)||(22532128-22532290)
chr8 (64-225)||(22536813-22536975)
chr8 (64-221)||(20397506-20397656)
chr8 (64-235)||(31722489-31722661)
chr8 (132-241)||(20178593-20178704)
chr8 (64-189)||(45469215-45469342)
chr8 (60-189)||(20022032-20022155)
chr8 (67-172)||(17906848-17906953)
chr8 (89-225)||(39694298-39694435)
chr8 (64-189)||(22317907-22318033)
chr8 (64-172)||(36727034-36727143)
chr8 (60-120)||(4380609-4380669)
chr8 (67-185)||(23419374-23419494)
chr8 (64-172)||(23899983-23900092)
chr8 (67-149)||(19700131-19700214)
chr8 (67-144)||(22254741-22254819)
chr8 (44-120)||(18761448-18761527)
chr8 (67-171)||(23948211-23948316)
chr8 (67-135)||(22583659-22583727)
chr8 (67-135)||(23889784-23889852)
chr8 (118-189)||(42265559-42265631)
chr8 (67-120)||(26454708-26454761)
chr8 (60-120)||(22208269-22208329)
chr8 (64-136)||(22610263-22610335)
chr8 (67-105)||(16198851-16198889)
chr8 (67-105)||(17158962-17159000)
chr8 (60-138)||(22345146-22345224)
chr8 (60-138)||(22356806-22356884)
chr8 (67-105)||(23479097-23479135)
chr8 (65-142)||(25657511-25657589)
chr8 (72-138)||(36305837-36305903)
chr8 (68-172)||(17218649-17218754)
chr8 (67-104)||(19880838-19880875)
chr8 (68-116)||(21514695-21514743)
chr8 (72-112)||(34758875-34758915)
[»] scaffold0407 (1 HSPs)
scaffold0407 (60-232)||(11266-11439)
[»] scaffold0241 (2 HSPs)
scaffold0241 (64-232)||(3069-3238)
scaffold0241 (126-232)||(2451-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (64-232)||(13388-13557)
[»] scaffold0077 (2 HSPs)
scaffold0077 (60-232)||(34226-34399)
scaffold0077 (67-154)||(5916-6003)
[»] scaffold0004 (6 HSPs)
scaffold0004 (60-232)||(328280-328455)
scaffold0004 (72-220)||(75691-75834)
scaffold0004 (72-172)||(110121-110222)
scaffold0004 (155-222)||(72841-72909)
scaffold0004 (60-138)||(73069-73147)
scaffold0004 (60-134)||(66064-66138)
[»] scaffold0080 (1 HSPs)
scaffold0080 (44-232)||(21766-21958)
[»] scaffold0064 (1 HSPs)
scaffold0064 (44-232)||(58633-58825)
[»] scaffold0020 (2 HSPs)
scaffold0020 (67-232)||(168998-169164)
scaffold0020 (68-232)||(143498-143663)
[»] scaffold0334 (1 HSPs)
scaffold0334 (64-232)||(405-574)
[»] scaffold0026 (1 HSPs)
scaffold0026 (64-232)||(146610-146779)
[»] scaffold0632 (1 HSPs)
scaffold0632 (67-232)||(1052-1218)
[»] scaffold0149 (2 HSPs)
scaffold0149 (64-206)||(29569-29711)
scaffold0149 (64-191)||(21539-21667)
[»] scaffold0019 (1 HSPs)
scaffold0019 (44-172)||(24104-24235)
[»] scaffold0036 (1 HSPs)
scaffold0036 (60-180)||(78177-78298)
[»] scaffold0113 (1 HSPs)
scaffold0113 (64-193)||(35418-35546)
[»] scaffold0285 (1 HSPs)
scaffold0285 (64-225)||(19655-19809)
[»] scaffold0037 (3 HSPs)
scaffold0037 (64-225)||(112962-113125)
scaffold0037 (68-185)||(81501-81619)
scaffold0037 (67-225)||(117806-117958)
[»] scaffold0956 (1 HSPs)
scaffold0956 (60-151)||(2524-2615)
[»] scaffold0156 (1 HSPs)
scaffold0156 (77-191)||(16532-16647)
[»] scaffold0230 (1 HSPs)
scaffold0230 (71-191)||(6688-6809)
[»] scaffold0047 (1 HSPs)
scaffold0047 (60-225)||(78958-79109)
[»] scaffold0083 (2 HSPs)
scaffold0083 (62-225)||(10749-10911)
scaffold0083 (62-143)||(5039-5120)
[»] scaffold0628 (1 HSPs)
scaffold0628 (60-235)||(1050-1226)
[»] scaffold0203 (1 HSPs)
scaffold0203 (24-120)||(17893-17992)
[»] scaffold0040 (1 HSPs)
scaffold0040 (64-191)||(106047-106175)
[»] scaffold0802 (1 HSPs)
scaffold0802 (64-187)||(4705-4830)
[»] scaffold0032 (1 HSPs)
scaffold0032 (24-120)||(61801-61900)
[»] scaffold0008 (1 HSPs)
scaffold0008 (67-188)||(135503-135625)
[»] scaffold0056 (1 HSPs)
scaffold0056 (64-172)||(67068-67177)
[»] scaffold0175 (1 HSPs)
scaffold0175 (64-189)||(8571-8698)
[»] scaffold0848 (1 HSPs)
scaffold0848 (68-189)||(2021-2143)
[»] scaffold0112 (1 HSPs)
scaffold0112 (64-222)||(2793-2945)
[»] scaffold0003 (1 HSPs)
scaffold0003 (64-149)||(96369-96454)
[»] scaffold0174 (6 HSPs)
scaffold0174 (78-221)||(19605-19748)
scaffold0174 (72-207)||(5182-5310)
scaffold0174 (72-207)||(11302-11430)
scaffold0174 (60-120)||(5454-5514)
scaffold0174 (60-138)||(19838-19916)
scaffold0174 (60-133)||(11603-11676)
[»] scaffold0010 (1 HSPs)
scaffold0010 (75-171)||(126311-126407)
[»] scaffold0028 (1 HSPs)
scaffold0028 (64-189)||(3048-3174)
[»] scaffold0256 (1 HSPs)
scaffold0256 (77-138)||(1856-1917)
[»] scaffold0220 (2 HSPs)
scaffold0220 (67-179)||(19895-20007)
scaffold0220 (157-216)||(13851-13911)
[»] scaffold0213 (1 HSPs)
scaffold0213 (59-120)||(19207-19268)
[»] scaffold0123 (1 HSPs)
scaffold0123 (67-189)||(7205-7330)
[»] scaffold0075 (1 HSPs)
scaffold0075 (67-171)||(60843-60948)
[»] scaffold1256 (1 HSPs)
scaffold1256 (60-120)||(2192-2252)
[»] scaffold0439 (1 HSPs)
scaffold0439 (112-190)||(12323-12403)
[»] scaffold0251 (1 HSPs)
scaffold0251 (67-216)||(20085-20234)
[»] scaffold0676 (1 HSPs)
scaffold0676 (24-120)||(2881-2980)
[»] scaffold0589 (1 HSPs)
scaffold0589 (67-171)||(4333-4438)
[»] scaffold0100 (1 HSPs)
scaffold0100 (64-218)||(26630-26779)
[»] scaffold0671 (1 HSPs)
scaffold0671 (67-149)||(4910-4993)
[»] scaffold0002 (1 HSPs)
scaffold0002 (67-149)||(398532-398615)
[»] scaffold0379 (1 HSPs)
scaffold0379 (72-138)||(10780-10846)
[»] scaffold0071 (1 HSPs)
scaffold0071 (67-120)||(15272-15325)
[»] scaffold0042 (1 HSPs)
scaffold0042 (67-167)||(29340-29441)
[»] scaffold0041 (1 HSPs)
scaffold0041 (77-122)||(5716-5761)
[»] scaffold0516 (1 HSPs)
scaffold0516 (60-116)||(5297-5353)
[»] scaffold0859 (1 HSPs)
scaffold0859 (106-225)||(4577-4696)
[»] scaffold0065 (1 HSPs)
scaffold0065 (67-171)||(52543-52648)
[»] scaffold0819 (1 HSPs)
scaffold0819 (66-169)||(5318-5420)
[»] scaffold0515 (1 HSPs)
scaffold0515 (67-142)||(5006-5082)
[»] scaffold0306 (1 HSPs)
scaffold0306 (67-142)||(5006-5082)
[»] scaffold0057 (1 HSPs)
scaffold0057 (67-142)||(69852-69928)
[»] scaffold0007 (1 HSPs)
scaffold0007 (64-194)||(158818-158949)
[»] scaffold0328 (1 HSPs)
scaffold0328 (24-98)||(18594-18670)
[»] scaffold0261 (1 HSPs)
scaffold0261 (154-220)||(6619-6686)
[»] scaffold0730 (1 HSPs)
scaffold0730 (60-138)||(6497-6575)
[»] scaffold0577 (1 HSPs)
scaffold0577 (67-169)||(9011-9112)
[»] scaffold0625 (1 HSPs)
scaffold0625 (67-120)||(5860-5913)
[»] scaffold0436 (1 HSPs)
scaffold0436 (67-120)||(8960-9013)
[»] scaffold0138 (2 HSPs)
scaffold0138 (67-120)||(21097-21150)
scaffold0138 (67-120)||(34112-34165)
[»] scaffold0070 (1 HSPs)
scaffold0070 (24-80)||(11193-11252)
[»] scaffold0116 (1 HSPs)
scaffold0116 (118-189)||(35514-35586)
[»] scaffold0104 (2 HSPs)
scaffold0104 (67-138)||(14938-15010)
scaffold0104 (67-138)||(16958-17030)
[»] scaffold0017 (1 HSPs)
scaffold0017 (64-120)||(26727-26783)
[»] scaffold0308 (1 HSPs)
scaffold0308 (118-169)||(13391-13442)
[»] scaffold0151 (1 HSPs)
scaffold0151 (67-169)||(31060-31161)
[»] scaffold1128 (1 HSPs)
scaffold1128 (108-169)||(448-510)
[»] scaffold0411 (1 HSPs)
scaffold0411 (64-149)||(13413-13498)
[»] scaffold0601 (1 HSPs)
scaffold0601 (68-105)||(196-233)
[»] scaffold0431 (1 HSPs)
scaffold0431 (44-120)||(5633-5712)
[»] scaffold0034 (1 HSPs)
scaffold0034 (67-120)||(29215-29268)
[»] scaffold0878 (1 HSPs)
scaffold0878 (60-120)||(3414-3474)
[»] scaffold0853 (1 HSPs)
scaffold0853 (60-120)||(2446-2506)
[»] scaffold0180 (1 HSPs)
scaffold0180 (126-189)||(28387-28451)
[»] scaffold0061 (2 HSPs)
scaffold0061 (60-120)||(14578-14638)
scaffold0061 (60-120)||(23636-23696)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 16058267 - 16058478
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||| ||||||||||| ||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16058267 cagagaagagaaagtggtagaatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaa 16058366  T
Q  121 ttgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtg 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16058367 ttgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggtttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 16058466  T
Q  221 tagaagtgatgt 232  Q
    ||||||||||||    
T  16058467 tagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 19676790 - 19676598
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19676790 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 19676691  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  19676690 gttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 21046022 - 21046214
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21046022 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 21046121  T
Q  141 gttgtagttatggaaatttgggaatt-aggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  21046122 gttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 42913105 - 42912936
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||    
T  42913105 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttagga 42913006  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42913005 attaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 20633604 - 20633799
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20633604 aatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 20633703  T
Q  141 gttgtag---ttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||| |||   |||||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||  ||||||||||||||||| ||||||    
T  20633704 gttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaaaataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 24723347 - 24723475
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||| ||||||| || |||| |||||||| |||||||||| ||    
T  24723347 aatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgaga 24723446  T
Q  164 attaggttt-gaagttgtaattggttgtt 191  Q
    |||| |||| |||||||||||||||||||    
T  24723447 attatgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 51324560 - 51324398
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| |||| ||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| ||| || ||||||    
T  51324560 aatctaaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattggga 51324461  T
Q  164 attaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||  ||||||||||||||||||   | |||||||||||| ||||||| ||||||||    
T  51324460 attaggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaa 51324398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 13302958 - 13302849
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||| ||| ||||||||    
T  13302958 aatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttggg 13302859  T
Q  163 aattaggttt 172  Q
    ||||||||||    
T  13302858 aattaggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 7051918 - 7052046
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || |||| || ||||| | |||||||||||    
T  7051918 aatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttggga 7052017  T
Q  164 attaggttt-gaagttgtaattggttgtt 191  Q
    ||||||||| ||| |||||||||||||||    
T  7052018 attaggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 7320590 - 7320716
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||||||||||  | | |||||||||||| |||| ||||||||| |||| ||||||| ||||||| |||||||| ||| ||||||||    
T  7320590 aatctaaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttggg 7320688  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    ||||| |||| || ||||||||||||||    
T  7320689 aattatgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 22350791 - 22350646
Alignment:
Q  44 aatcttatagagtccgatctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggt 142  Q
    |||||| |||||||||||| |||||||||||| |||||||||||  |||  ||||||| |||  ||| ||||||||| |||| ||||||| |||||||||    
T  22350791 aatcttgtagagtccgatc-aatctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctgaaaattgaatttaacaagttgtaggt 22350694  T
Q  143 tgtagttatggaaatttgggaatta-ggtttgaagttgtaattggttg 189  Q
    ||||||| ||| ||||||||||||| |||| ||||||| || ||||||    
T  22350693 tgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 21239045 - 21239130
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagtt 149  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || |||||||||||||    
T  21239045 aatctaaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 42697837 - 42697732
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||| ||||||  |||| |||||||||||||||||||||||| |||||  |||||||||||||||||||||||| ||   ||||| ||||    
T  42697837 ctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaat 42697738  T
Q  166 taggtt 171  Q
    ||||||    
T  42697737 taggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 4595849 - 4595944
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatt 158  Q
    |||||||||||| |||| |||||| ||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||||||||| ||| ||||    
T  4595849 aatctaaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 222
Target Start/End: Complemental strand, 21168989 - 21168831
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||| | ||| ||||||||||| || ||||||||||||| |||||||||||| |||||||| | ||||   | ||  |||||||||    
T  21168989 aatctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttggga 21168890  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    || ||| |||||| | ||  || ||| ||||||||||||||||||  |||||||||||||    
T  21168889 ataaggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgta 21168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 44822079 - 44822145
Alignment:
Q  126 tttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgtt 191  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  44822079 tttaacaggtggtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 51336532 - 51336479
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 28476726 - 28476786
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| |||||||||| |||||||||||  | ||||||||||||||||||    
T  28476726 atctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 12327742 - 12327795
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| |||| |||||| |||||||||||||||||||||| |||||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 29763631 - 29763684
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  29763631 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 45755573 - 45755468
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaat-tgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||| ||||||  |||| ||||| |||||| ||| |||||||||  ||  ||||||| |||||||||||||||| ||  |||||| ||||    
T  45755573 ctaaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaat 45755474  T
Q  166 taggtt 171  Q
    ||||||    
T  45755473 taggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 46197744 - 46197797
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  46197744 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 12710927 - 12710867
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||||| ||||||||  ||||||||||  |  |||||||||||||||||    
T  12710927 atctaatctaaggtaaagatgggactagctttctctaatattgggttgtataattctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 45499421 - 45499374
Alignment:
Q  91 tctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    ||||||||| || |||||||||||||||||||||||||| ||| ||||    
T  45499421 tctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 8306666 - 8306588
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    ||||||||||||||||  |||||||||  ||||||||||  |  ||||||||||||| |||  | ||||||||||||||    
T  8306666 atctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgt 8306588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 11946453 - 11946391
Alignment:
Q  108 tataattctgaaattgagtttaacatgttgtaggttgtagttatg-gaaatttgggaattagg 169  Q
    ||||||||||||||||  |||||||||||||||||| ||||| || | | |||||||||||||    
T  11946453 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 11946391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 50001529 - 50001476
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| ||||| |||||||||||  | |||||||||||    
T  50001529 ctaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 8276079 - 8276139
Alignment:
Q  157 tttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatt 216  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 8276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 38056762 - 38056822
Alignment:
Q  157 tttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatt 216  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 38056822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 27 - 232
Target Start/End: Original strand, 17518829 - 17519038
Alignment:
Q  27 agaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattg 123  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  17518829 agaagagaaagcggtagaatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattg 17518928  T
Q  124 agtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    | ||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17518929 actttagaatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 17519028  T
Q  223 gaagtgatgt 232  Q
    ||| ||||||    
T  17519029 gaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 27 - 232
Target Start/End: Original strand, 17533691 - 17533900
Alignment:
Q  27 agaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattg 123  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  17533691 agaagagaaagcggtagaatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattg 17533790  T
Q  124 agtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    | ||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17533791 actttagaatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 17533890  T
Q  223 gaagtgatgt 232  Q
    ||| ||||||    
T  17533891 gaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 60 - 241
Target Start/End: Complemental strand, 49900790 - 49900608
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  49900790 atctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 49900691  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgtccatctcat 241  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||||    
T  49900690 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 17045045 - 17044853
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17045045 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17044946  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  17044945 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 40808052 - 40807883
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  40808052 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 40807953  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  40807952 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 51 - 232
Target Start/End: Complemental strand, 40812901 - 40812720
Alignment:
Q  51 tagagtccgatctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagtta 150  Q
    |||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40812901 tagagttcgatc-aatctaaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgttgtaggttgtagtta 40812803  T
Q  151 tggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  40812802 tgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 44 - 230
Target Start/End: Original strand, 22306556 - 22306746
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22306556 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 22306655  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgat 230  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||    
T  22306656 gttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgcataagtgat 22306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 17047205 - 17047013
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17047205 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 17047106  T
Q  141 gttgtagttatggaaatttgggaatt-aggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||||   |||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  17047105 gttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaatccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 17539166 - 17538993
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  17539166 atctaatttaaggtaagggtgagactaactttatctaattctaagttgtataattctgaaattgattttatcatgttgtaggttgtagttatgggaattt 17539067  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17539066 ggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 44274474 - 44274305
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  44274474 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 44274375  T
Q  164 atta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||   |||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  44274374 attatattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 230
Target Start/End: Original strand, 41172363 - 41172534
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||     
T  41172363 atctaatttaaggtaagggtgggactaactttctctacttataagttgtataactctgaaattgagtttagcatgttgtaggttgtagttatgggaatta 41172462  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgat 230  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  41172463 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 11259510 - 11259318
Alignment:
Q  44 aatcttatagagtccgat---ctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| |||||||||||   ||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  11259510 aatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaatttagcatgttgtag 11259411  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
     |||||||||||  ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  11259410 attgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttgaatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  83 actaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaagttgta 181  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  182 attggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 10563764 - 10563596
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  10563764 aatctaaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttggga 10563665  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||||||||| |||||| ||||||    
T  10563664 attaggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 17694146 - 17693954
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| ||| |||| |||| |||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  17694146 aatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataattctaaaattgagtttagcatgttgtag 17694047  T
Q  141 gttgtagttatggaaatttgggaattag-gtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||||||||||||| |||||||  |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||    
T  17694046 gttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||  |||||| |||||||| |    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 35354662 - 35354489
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||| |||  |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  35354662 atctaatttaagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttggttgtagttatgggaattt 35354563  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || ||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||||||||||| ||||||    
T  35354562 ggaaattaggttttgaagttgtaattgattgttggtagagtagaaaatccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 15931481 - 15931672
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||| |||    
T  15931481 aatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-gtataattctgaaatagagtttagcatgttttag 15931579  T
Q  141 gttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||||  || |||||||||||||||||  ||||||||||||||||| ||||||    
T  15931580 gttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaattcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 216
Target Start/End: Complemental strand, 14508926 - 14508749
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| || ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  14508926 aatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgaggttagcatgttgtag 14508827  T
Q  141 gttgtagttatggaaatttgggaattaggttt--gaagttgtaattggttgttaatagagtagaaaatctgttgaatt 216  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||||||||  | |||||||| |||||| ||||||    
T  14508826 gttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  93 tctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaagttgtaatt 184  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 19568204 - 19568366
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |   ||||||| |||||||||||||||| ||| |||||||||    
T  19568204 aatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttggga 19568303  T
Q  164 atta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||| |||| ||||||||||||||| |||   | |||||| |||| |||||||  ||||||||    
T  19568304 attagggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaa 19568366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 189
Target Start/End: Complemental strand, 11563785 - 11563654
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatt 158  Q
    |||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||| ||||  | ||||||| |||||||||||||||| ||| ||||    
T  11563785 atctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttgggaatt 11563686  T
Q  159 tgggaattaggttt-gaagttgtaattggttg 189  Q
    ||||||||||||||  ||||||||||||||||    
T  11563685 tgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 9510912 - 9511062
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||  ||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || |||| |||||||| ||| |||||| ||    
T  9510912 aatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgaga 9511011  T
Q  164 attaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttga 213  Q
    ||||||||| |||||||||||||||||||   | |||||||||||||||||    
T  9511012 attaggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 9518887 - 9519037
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||  ||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || |||| |||||||| ||| |||||| ||    
T  9518887 aatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgaga 9518986  T
Q  164 attaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttga 213  Q
    ||||||||| |||||||||||||||||||   | |||||||||||||||||    
T  9518987 attaggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 33565143 - 33565018
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||| |||| ||| |||||||     
T  33565143 aatctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttgga 33565044  T
Q  163 aattaggttt-gaagttgtaattggt 187  Q
    |||||||||| |||||||||||||||    
T  33565043 aattaggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 35960924 - 35961049
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||| ||| |||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||||| |||| |||||||||||     
T  35960924 aatctaaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttgga 35961023  T
Q  163 aattaggttt-gaagttgtaattggt 187  Q
    |||||||||| |||||||||||||||    
T  35961024 aattaggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 15566843 - 15566744
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||||||||||||| | ||||||||||   |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  15566843 cagagaagagaaagcggtagaatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 13185951 - 13185842
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaatt-gagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| ||||||||||| |||||  ||||||||| ||| | || ||||||| |||||||||||||||| ||||||||||||    
T  13185951 aatctaaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttggg 13185852  T
Q  163 aattaggttt 172  Q
    ||||||||||    
T  13185851 aattaggttt 13185842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 16050980 - 16050875
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||||| ||   ||||| |||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatt 16050881  T
Q  167 aggttt 172  Q
    ||||||    
T  16050880 aggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 42323969 - 42324094
Alignment:
Q  66 tctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaa 164  Q
    |||||||||| |||||||||||  || | ||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||| ||| ||||||| ||    
T  42323969 tctaaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaa 42324068  T
Q  165 tta-ggtttgaagttgtaattggttg 189  Q
    ||| |||| |||||||||||||||||    
T  42324069 ttagggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 17541494 - 17541425
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagttta 129  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17541494 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttta 17541425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 24177735 - 24177840
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| |||||||| || ||||||||||| |||||||||||||||||||| ||  ||||| | || ||||||||||||| ||||||||||||||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatt 24177834  T
Q  167 aggttt 172  Q
    | ||||    
T  24177835 atgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  174 aagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 35064683 - 35064745
Alignment:
Q  170 tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  35064683 tttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  71 ggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg 169  Q
    ||||| ||||||||||| |||||||||||||||||  |||||||||| ||||||  ||||||| |||||||||||||||| ||| |||||| ||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 12509349 - 12509436
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgga 154  Q
    ||||||||| |||||||| ||  |||| |||||||||||||||||||||||||||||  |||||||||| ||||| ||||||| ||||    
T  12509349 ctaaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagttttgga 12509436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 49968859 - 49968981
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||  ||||||||||  ||| |||||||||||| |||| ||||||||| |||| ||||||| ||||||| |||||||| ||  ||||||||||||    
T  49968859 taaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaatt 49968957  T
Q  167 aggttt-gaagttgtaattggttg 189  Q
    ||||||  ||||||||||||||||    
T  49968958 aggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 37039080 - 37038978
Alignment:
Q  90 ttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg-aatta-ggtttgaagttgtaattgg 186  Q
    |||| ||||| |||||||||||||||||||| |||  |||||||||||||||||||||||| ||| |||||||| ||||| ||||  |||||||||||||    
T  37039080 ttctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgtaattgg 37038981  T
Q  187 ttg 189  Q
    |||    
T  37038980 ttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 15446867 - 15446920
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  15446867 ctaaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 36528920 - 36528851
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgtt 136  Q
    ||||||||| ||||||| ||| |||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  36528920 ctaaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 53646012 - 53646078
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccg---atctaatctaaggtaaaggtgggactaa 87  Q
    |||||||||||||||||||||||||| ||||||| |   |||||||||||||||| |||||||||||    
T  53646012 cagagaagagaaagcggtagaatcttgtagagtctgatcatctaatctaaggtaagggtgggactaa 53646078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 14250078 - 14250185
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||| |||||  ||||||||||  |||| |||||||||||||| ||||| | ||||||  |||||||||||||| | ||||||| |||| ||||  ||    
T  14250078 aatctatggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaaga 14250177  T
Q  164 attaggtt 171  Q
    ||||||||    
T  14250178 attaggtt 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 6159503 - 6159387
Alignment:
Q  25 agagaagagaaagcggtagaatcttatagagtccg---atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaat 121  Q
    |||||||||||||||||| |||||| |||||||||   |||||||||||||||| |||| ||||   ||||||||||  |  ||||||| ||||| |||     
T  6159503 agagaagagaaagcggtataatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaa 6159404  T
Q  122 tgagtttaacatgttgt 138  Q
     | ||||||||||||||    
T  6159403 ggggtttaacatgttgt 6159387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 5200240 - 5200284
Alignment:
Q  65 atctaaggtaaaggtgggactaaatttctctaattctaagttgta 109  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  5200240 atctaaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 40957238 - 40957186
Alignment:
Q  112 attctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaa 164  Q
    ||||| ||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  40957238 attctaaaattgaatttaacatgttgttggttgtagttttggaaatttgggaa 40957186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 17208580 - 17208524
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| ||||||||||  ||||||||||  | ||||||||||||||||||    
T  17208580 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 31223887 - 31223945
Alignment:
Q  110 taattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg 169  Q
    ||||||||||| ||  ||||||| |||||||||||||||| ||| |||||||||||||||    
T  31223887 taattctgaaactggatttaacaggttgtaggttgtagttttgg-aatttgggaattagg 31223945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 6820263 - 6820229
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtcc 58  Q
    |||||||||||||||||||||||||| ||||||||    
T  6820263 cagagaagagaaagcggtagaatcttgtagagtcc 6820229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 3263962 - 3264031
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgtt 136  Q
    ||||||||| ||| ||| |||  ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  3263962 ctaaggtaagggtcggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 3264031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 16979965 - 16979912
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| ||||| |||||||||||  | |||||||||||    
T  16979965 ctaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 45530652 - 45530725
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaa-ttaggttt-gaagttgtaattggttg 189  Q
    ||||||| ||||||| ||||| |||||||||| ||| |||||| ||| ||||| || |||||||||||||||||    
T  45530652 aaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 22652825 - 22652773
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||  |||||||||| |||||||||||||||||  | |||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 29907699 - 29907639
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||| ||||  |  |||||||||||||||||    
T  29907699 atctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 29948865 - 29948805
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||| ||||  |  |||||||||||||||||    
T  29948865 atctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 29998019 - 29997959
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||| ||||  |  |||||||||||||||||    
T  29998019 atctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 144; Significance: 8e-76; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 225
Target Start/End: Original strand, 12486 - 12691
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||||||||||||| ||||||||||||   ||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  12486 cagagaagagaaagcggtagaatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaa 12585  T
Q  121 ttgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 219  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12586 ttgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgt 12685  T
Q  220 gtagaa 225  Q
     |||||    
T  12686 atagaa 12691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  71 ggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg- 169  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||     
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  170 tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 24 - 232
Target Start/End: Original strand, 21299997 - 21300209
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||||||||||||| ||||||| ||||   ||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  21299997 cagagaagagaaagcggtagaatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T
Q  121 ttgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 219  Q
    || |||||| |||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21300097 ttaagtttagcatgttgtaggtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgt 21300196  T
Q  220 gtagaagtgatgt 232  Q
    |||||| ||||||    
T  21300197 gtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 19921680 - 19921525
Alignment:
Q  78 gtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaag 176  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  19921680 gtgggactacctttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaag 19921581  T
Q  177 ttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19921580 ttataattagttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 7485050 - 7484890
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| |    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagagatgt 7484890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 20566602 - 20566448
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||        |||||    
T  20566602 aatctaaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagtta--------tggga 20566511  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  20566510 attaggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaa 20566448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 31622177 - 31622028
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||||||||||||| ||||||| ||| ||||||||||| || |||||||||||||||||||||||||| |||||||| | ||||        ||||||    
T  31622177 atctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------aaattt 31622086  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatt 216  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||  |||||||    
T  31622085 gggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  63 taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||| |||||||| |||| |||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| ||||||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  163 aattaggttt-gaagttgtaattggttgtt 191  Q
    ||||| |||| |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 31457013 - 31456888
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| |||| |||||| ||||||||||| ||||| |||| ||||||||| ||  |||||||    ||||||||||||| ||||||||||| ||||    
T  31457013 ctaaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatt 31456914  T
Q  167 aggttt-gaagttgtaattggttgtt 191  Q
    |||||| |||||||||||||||||||    
T  31456913 aggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 21617924 - 21618047
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattct-gaaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| |||||||||||||||||  ||||| |||  ||||||| ||||||| |||||||||||||||| ||| |||||| |    
T  21617924 aatctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgag 21618023  T
Q  163 aatta-ggtttgaagttgtaattg 185  Q
    ||||| |||| ||||||| |||||    
T  21618024 aattagggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 20469172 - 20469288
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| |||||||||||||||||  ||||| |||| ||||||  ||||||| |||||||||||||||| |||  | ||| |    
T  20469172 aatctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgag 20469271  T
Q  163 aattaggtttgaagttg 179  Q
    |||||||||| ||||||    
T  20469272 aattaggtttaaagttg 20469288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 10954142 - 10954038
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| |||||||||||  |||  |||||||||||||| ||||| ||||||||  |||||||||||||||| ||||||| |||| ||||  |||||    
T  10954142 ctaaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatt 10954043  T
Q  167 aggtt 171  Q
    |||||    
T  10954042 aggtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 6551286 - 6551342
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  6551286 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 17876197 - 17876132
Alignment:
Q  126 tttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgt 190  Q
    ||||||| || ||||||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  17876197 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  108 tataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggt 187  Q
    ||||||||||||||||  ||||||| ||| |||||||||||| | | |||||| ||||||||||| |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 10774663 - 10774764
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||||||||||  ||| ||||||||||| ||||| |||||| ||||||| ||||||||| ||||| |||||||| ||  |||| ||||||    
T  10774663 ctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaat 10774760  T
Q  166 tagg 169  Q
    ||||    
T  10774761 tagg 10774764  T

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Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 25249827 - 25249910
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| ||| |||||||  |||| ||||| |||||| |||||||||| ||||||  |||||||||||||||||| |||||    
T  25249827 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

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Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 25313611 - 25313694
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| ||| |||||||  |||| ||||| |||||| |||||||||| ||||||  |||||||||||||||||| |||||    
T  25313611 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 22111876 - 22111810
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||| ||||||| ||| ||||||||||| |  ||||||||||| |||||||||||||| ||||||||    
T  22111876 gtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgt 22111810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 17011781 - 17011728
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  17011781 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 21405678 - 21405751
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaa-ttaggttt-gaagttgtaattggttg 189  Q
    ||||||| ||||||| ||||| |||||||||| ||| |||||||||| ||||| || |||||||||||||||||    
T  21405678 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  71 ggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||| ||||||||| | |||||||||||||||||||||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 266090 - 266038
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 18744930 - 18744874
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| ||||||||||| ||||||||||  |  |||||||||||||||||    
T  18744930 aatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 32607308 - 32607386
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  32607308 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 32607386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtg 220  Q
    ||||||| |||||||||||||||||||| ||||||||   ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 23199180 - 23199259
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  23199180 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 194 - 25
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  194 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttggga 95  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  94 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 24516242 - 24516073
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24516242 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttggga 24516143  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24516142 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 17307546 - 17307373
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17307546 atctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 17307447  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  17307446 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 5031121 - 5031297
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  5031121 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 5031220  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgtcca 235  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||    
T  5031221 gggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgttgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 24780813 - 24781005
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  ||||    
T  24780813 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgaagtag 24780912  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24780913 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 9976008 - 9975816
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9976008 aatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 9975909  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||    
T  9975908 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaatccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 67 - 232
Target Start/End: Complemental strand, 40912373 - 40912207
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 40912274  T
Q  167 agg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||| |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  40912273 aggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 19201192 - 19201365
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||| ||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||    
T  19201192 atctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttataggaattt 19201291  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  19201292 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 22251440 - 22251600
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  22251440 atctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 22251539  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 219  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22251540 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 24436727 - 24436535
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  24436727 aatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataattctgaaattgagtttagcatgttgtag 24436628  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  24436627 gttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 2523739 - 2523912
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  2523739 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgttgtaggttgtatttatgggaattt 2523838  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || ||||||| ||| || |||||||||||| |||||||||||||||||  |||||||||||| |||| ||||||    
T  2523839 ggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgttgaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt-aggt 170  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||| || |    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  105 ttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt-aggtttgaagttgtaattggttgttaatagagtagaa 203  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  204 aatctgttgaatttgtgtagaagtgatgt 232  Q
    |||| ||||||||||||||||| ||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 116 - 232
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  116 tgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaa 214  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  215 tttgtgtagaagtgatgt 232  Q
    ||||||||||| ||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 25142260 - 25142133
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||| ||| ||||||||    
T  25142260 aatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttggg 25142161  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    |||||||||| |||||||||||||||||    
T  25142160 aattaggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 357934 - 357809
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| | ||||||||||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatt 357835  T
Q  167 aggttt-gaagttgtaattggttgtt 191  Q
    |||||| |||||||||||||||||||    
T  357834 aggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 1383539 - 1383667
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    ||||| |||||| |||| |||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| |||||||||||||    
T  1383539 aatctgaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttggga 1383638  T
Q  164 attaggttt-gaagttgtaattggttgtt 191  Q
    ||||||||| |||||||||||||||||||    
T  1383639 attaggtttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 225
Target Start/End: Complemental strand, 27852741 - 27852561
Alignment:
Q  46 tcttatagagtccgatctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttg 144  Q
    |||| |||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||    
T  27852741 tcttgtagagtccgatc-aatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttg 27852643  T
Q  145 tagttatggaaatttgggaattaggttt-gaagttgta-attggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    | ||| ||| |||||||||||||| ||| ||||||||| |||||| | |   ||||||| ||||||||||||||  |||||||    
T  27852642 ttgttttgggaatttgggaattagatttagaagttgtagattggtggatttaagagtag-aaatctgttgaattgatgtagaa 27852561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 22502070 - 22501897
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-a 119  Q
    |||| ||||||||||||||||||||| ||||||||||||   ||||||||||||| ||||||||||| |||||||||||||||||  | ||||||||| |    
T  22502070 cagaaaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaga 22501971  T
Q  120 attgagtttaacatgttgtaggttgtagttatggaaatttggg-aatta-ggtttgaagttgtaattggttgtt 191  Q
    ||||  ||||||||||||| |||||||||| |   |||||||| ||||| |||| |||||||| ||||||||||    
T  22501970 attggatttaacatgttgtgggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 24 - 191
Target Start/End: Complemental strand, 22510004 - 22509831
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-a 119  Q
    |||| ||||||||||||||||||||| ||||||||||||   ||||||||||||| ||||||||||| |||||||||||||||||  | ||||||||| |    
T  22510004 cagaaaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaga 22509905  T
Q  120 attgagtttaacatgttgtaggttgtagttatggaaatttggg-aatta-ggtttgaagttgtaattggttgtt 191  Q
    ||||  ||||||||||||| |||||||||| |   |||||||| ||||| |||| |||||||| ||||||||||    
T  22509904 attggatttaacatgttgtgggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 3539893 - 3539766
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| |||| || ||||||| |||||||||||||||| | | |||||| |    
T  3539893 aatctaaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgag 3539794  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    |||||||||| |||||||||||||||||    
T  3539793 aattaggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 149454 - 149549
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccg---atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattct 116  Q
    |||||||||||||||||||||||||| |||||||||   |||||||||||||||| ||||| ||||  ||||||||||  | ||||||||||||||    
T  149454 cagagaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 25046171 - 25046088
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||||| |||||  |||||||||||||||| |||||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagtt 25046088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 22260094 - 22259974
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    ||||||||||||  ||| |||||| |||| |||||||||||| | || ||||||||| |||| ||||||| |||||||||||||||| | | ||||||||    
T  22260094 aatctaaggtaagagtgtgactaactttcactaattctaagt-gcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttggg 22259997  T
Q  163 aattagg-tttgaagttgtaatt 184  Q
    ||||||| || ||||||||||||    
T  22259996 aattaggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 5986230 - 5986125
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||||||| ||  |||| ||||||||||||||||||||||| ||||||  ||||||| |||||||||| ||||| ||   ||||| ||||    
T  5986230 ctaaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaat 5986131  T
Q  166 taggtt 171  Q
    ||||||    
T  5986130 taggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 179
Target Start/End: Complemental strand, 14694383 - 14694266
Alignment:
Q  63 taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgg 161  Q
    ||||||||||||| |||| |||||| ||||| |||||||||||  | ||||| || ||||||  ||||||||| ||||||||||||||  ||| |||||     
T  14694383 taatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtttgggagatttga 14694284  T
Q  162 gaattaggtttgaagttg 179  Q
    |||||||| || ||||||    
T  14694283 gaattagggttaaagttg 14694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 24884464 - 24884399
Alignment:
Q  126 tttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgt 190  Q
    ||||||| || ||||||||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  24884464 tttaacaggtggtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 44072610 - 44072509
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||| |||||| |||| |||||||||||| |||| ||| ||||| |||| |||| || |||||||||||||||| ||| ||||||| |||    
T  44072610 ctaaggtaagggtgagactaactttcactaattctaagt-gtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaat 44072512  T
Q  166 tag 168  Q
    |||    
T  44072511 tag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 18390229 - 18390315
Alignment:
Q  83 actaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg 169  Q
    ||||| |||||||||||||||||  |||||||||| |||| || ||||||| | |||| ||||||||| ||| |||||||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattagg 18390315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 19358893 - 19358820
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaa-ttaggttt-gaagttgtaattggttg 189  Q
    ||||||| ||||||| ||||| |||||||||| ||| |||||||||| ||||| || |||||||||||||||||    
T  19358893 aaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 21080968 - 21081021
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  21080968 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 18388248 - 18388312
Alignment:
Q  126 tttaacatgttgtaggttgtagttatggaaatttgggaatta-ggtttgaagttgtaattggttg 189  Q
    ||||||| |||||||||||||||| ||| ||||||||||||| |||| ||||||| || ||||||    
T  18388248 tttaacaagttgtaggttgtagttttgggaatttgggaattatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 25184242 - 25184166
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgag-tttaacatgttgtaggt 142  Q
    ||||||||| |||| |||||| |||||||||||||||||  | |||||||||||   || |||||||||||||||||    
T  25184242 ctaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaaactagatttaacatgttgtaggt 25184166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 12626381 - 12626491
Alignment:
Q  26 gagaagagaaagcggtagaatcttatagagtccgatct----aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaat 121  Q
    |||||||||||| ||||||||||| ||||||||||||     ||| |||||||| |||||||||||  |||  ||||  |||| |||||||||||||||     
T  12626381 gagaagagaaagtggtagaatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaaccttcattaatcataag-tgtataattctgaaaa 12626479  T
Q  122 tgagtttaacat 133  Q
     | |||||||||    
T  12626480 agggtttaacat 12626491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 23801556 - 23801478
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  23801556 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 23801478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 21315472 - 21315528
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  21315472 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 21335262 - 21335318
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  21335262 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 39683214 - 39683162
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatgga-aatttgggaattagg 169  Q
    ||||||| |||||||||||||||||| ||||| | || |||||||||||||||    
T  39683214 aaattgaatttaacatgttgtaggttttagtttttgagaatttgggaattagg 39683162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 8e-73; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 12465233 - 12465425
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12465233 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 12465332  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  12465333 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 60 - 225
Target Start/End: Original strand, 12127155 - 12127321
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12127155 atctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttttagttatggaaattt 12127254  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  12127255 gggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaa 12127321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 20620338 - 20620173
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta 167  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatta 20620239  T
Q  168 gg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20620238 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 8851132 - 8851324
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8851132 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 8851231  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  8851232 gttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaatctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 12322903 - 12323095
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12322903 aatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 12323002  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  12323003 gttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 13147445 - 13147637
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||  |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  13147445 aatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgttgtag 13147544  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13147545 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 11067547 - 11067355
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||||||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11067547 aatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 11067448  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  11067447 gttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaattcgttgaatttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 12372353 - 12372161
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  12372353 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgcag 12372254  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  12372253 gttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 32433562 - 32433754
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32433562 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 32433661  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  32433662 gttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaattagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 14180394 - 14180563
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  14180394 aatctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttggga 14180493  T
Q  164 atta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  14180494 attatgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 20214204 - 20214034
Alignment:
Q  63 taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    ||||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  163 aatt-aggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 20586408 - 20586239
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |    
T  20586408 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaa 20586309  T
Q  164 atta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    | || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  20586308 actagggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 46386084 - 46386253
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||| ||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||    
T  46386084 aatctaagataagggtaggactaactttctctaattctaagttgtataattctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgaga 46386183  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  46386184 attaggttttgaagttgtaattggttgttaatagagtagaaattccgttgaatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 16999515 - 16999320
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattcta--agttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||  ||||||||||||||||||||||||||| |||||| |    
T  16999515 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataattctgaaattgagtttagcatgttat 16999416  T
Q  139 aggttgtagttatggaaattt-gggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    | ||||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  16999415 atgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||| |    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 24269943 - 24270112
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||   | ||  || ||||||    
T  24269943 aatctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttggga 24270042  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||| || ||||||    
T  24270043 attaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 47974819 - 47974944
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| |||| |||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| ||||||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatt 47974918  T
Q  167 aggttt-gaagttgtaattggttgtt 191  Q
    | |||| |||||||||||||||||||    
T  47974919 atgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 48807321 - 48807483
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| || ||||||| ||||||| |||||||| ||| ||||||||    
T  48807321 aatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttggg 48807420  T
Q  163 aattaggt-ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||| |||   ||||||||||||||||| |   ||||||| ||||||||||||||  |||||||    
T  48807421 aatttggtacagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaa 48807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 35771440 - 35771546
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaatt-gagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| ||||||||||| |||||||||||||||||  ||||||||||||| | || ||||||| |||||||||||||||| |||||||||||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaat 35771539  T
Q  166 taggttt 172  Q
    |||||||    
T  35771540 taggttt 35771546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 15095633 - 15095759
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||||||||||  ||| |||||||||||| |||| ||||||||| |||| ||||||| |||||||||||||||| ||| ||||||||    
T  15095633 aatctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttggg 15095731  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    |||||||||| |||||||||||| ||||    
T  15095732 aattaggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 12754611 - 12754716
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||| ||  ||||||| || |||||||||||| |||||||||||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaatt 12754710  T
Q  167 aggttt 172  Q
    | ||||    
T  12754711 atgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 14218891 - 14219000
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||| ||  ||||| ||    
T  14218891 aatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttgg 14218990  T
Q  163 aattaggttt 172  Q
    ||||||||||    
T  14218991 aattaggttt 14219000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 33002205 - 33002055
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta 167  Q
    |||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||  ||||||       ||||||||||| ||| |||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgggaatta 33002114  T
Q  168 -ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
     |||| |||||||||||||||||||   | |||||| ||||||||||||| ||||||||    
T  33002113 gggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaa 33002055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 13698634 - 13698761
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||| ||||||| ||||| ||||| |||||||  ||||||||||| |||  ||| ||||||| |||||||||||| ||||||||||||    
T  13698634 aatctaaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttggg 13698733  T
Q  163 aatta-ggtttgaagttgtaattggttg 189  Q
    ||||| |||| |||||||||||||||||    
T  13698734 aattagggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 8135234 - 8135359
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| ||||||  ||| ||||| |||||| |||| ||||||||||||| ||||||| |||||||||||||||| | | |||||| ||    
T  8135234 aatctaaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgaga 8135332  T
Q  164 attaggttt-gaagttgtaattggttg 189  Q
    ||||||||| |||||||||||||||||    
T  8135333 attaggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 15140269 - 15140143
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||  |||| ||||||  ||| |||||||||||| |||| ||||||||| |||| ||||||| |||||||||||||||| ||| ||||||||    
T  15140269 aatctaaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttggg 15140171  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    ||||||||||  ||||||||||||||||    
T  15140170 aattaggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||| || |||| || ||||||| ||||||| |||||||| ||| ||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  167 ag 168  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 44374903 - 44374834
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagttta 129  Q
    |||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  44374903 atctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttta 44374834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 44383768 - 44383699
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagttta 129  Q
    |||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  44383768 atctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttta 44383699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 4690655 - 4690715
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4690655 atctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 13132363 - 13132478
Alignment:
Q  110 taattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatct 208  Q
    ||||||||||||||| ||||||| ||||||||| |||||| ||| |||||||||||||||||| ||||||||||| ||||| |   ||||||| ||||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttgatttaagagtag-aaatct 13132461  T
Q  209 gttgaatttgtgtagaa 225  Q
    ||||||||  |||||||    
T  13132462 gttgaattgatgtagaa 13132478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 4071873 - 4071767
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| ||||||||||| |||||||||||||||||  ||||| |||| ||||||  ||||||| |||||||||||||||| |||  ||||| ||||    
T  4071873 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaat 4071774  T
Q  166 taggttt 172  Q
    |||||||    
T  4071773 taggttt 4071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 188
Target Start/End: Complemental strand, 15624074 - 15623950
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| ||||||  |||  ||||||||||| |||| ||||||||||||| ||||| | ||||||| |||||||| ||| |||||| ||    
T  15624074 aatctaaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgaga 15623976  T
Q  164 attaggttt-gaagttgtaattggtt 188  Q
    ||||||||| | ||||||||||||||    
T  15623975 attaggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 154
Target Start/End: Original strand, 10658850 - 10658937
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgga 154  Q
    ||||||||| |||||||||||  |||| |||||||||||||||| ||||||||||||  |||||||| ||||||| ||||||| ||||    
T  10658850 ctaaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagttttgga 10658937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 25943166 - 25943041
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| ||||||| ||| ||||||||||| |  ||||||||||||||||||||| |||| |||||||| | ||||   | ||  ||||||| ||||||| |    
T  25943166 gtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattaggtt 25943067  T
Q  171 ttgaagttgtaattggttgttaatag 196  Q
    ||||||| ||||||||||||||||||    
T  25943066 ttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 154
Target Start/End: Original strand, 36704566 - 36704657
Alignment:
Q  63 taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgga 154  Q
    ||||||||||||| |||||||||||  |||| ||||| |||||||| |||||||||||||   |||||||||||||| | ||||||| ||||    
T  36704566 taatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagttttgga 36704657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 15289158 - 15289052
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||||||| || |||||||||||||||||  ||||| |||| ||||||  ||||||| |||||||||||||||| ||   ||||| ||||    
T  15289158 ctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaat 15289059  T
Q  166 taggttt 172  Q
    |||||||    
T  15289058 taggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 12557947 - 12557853
Alignment:
Q  94 ctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggt 187  Q
    |||||||||||| |||| ||||| ||| |||| ||||||| |||||||||||||||| ||| ||||||| |||||||||| ||||||| |||||||    
T  12557947 ctaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 36685187 - 36685246
Alignment:
Q  110 taattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg 169  Q
    ||||||||||| ||  ||||||| |||||||||||||||| |||||||||||||||||||    
T  36685187 taattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaattagg 36685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 13744662 - 13744728
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||| ||||||| ||| ||||||||||| || ||||||||||||||||||| |||||| ||||||||    
T  13744662 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 18955383 - 18955330
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||| |||||| |||||||||||||||||  |||||||||||||    
T  18955383 ctaaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 19195690 - 19195611
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   ||||||||||||| ||||||||||  ||||||||||  | ||||||||||||||||||    
T  19195690 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  108 tataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggt 187  Q
    ||||||||||||||||  ||||| | ||| |||||||||||| | | |||||||||||||||||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 8930757 - 8930835
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| |||||||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  8930757 atctaatctaaggtaagggtgggactacatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 8930835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 11054766 - 11054642
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg-aa 164  Q
    ||||||||| |||||||||||  |||  | ||||||||| || | ||||||||| |||| ||||||| ||||||||||||| || ||| |||||||| ||    
T  11054766 ctaaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaa 11054668  T
Q  165 tta-ggtttgaagttgtaattggttg 189  Q
    ||| ||||  ||||||||||||||||    
T  11054667 ttagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 18990900 - 18990847
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||||||||  ||||| |||||||||||||||||  |||||||||||||    
T  18990900 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 18990847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 29052181 - 29052234
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  29052181 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 43276717 - 43276796
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||  |  |||||||||||||||||    
T  43276717 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 16250219 - 16250287
Alignment:
Q  65 atctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacat 133  Q
    ||||||||||| ||||||||||| ||||||||||  | |||||||||||| |||||  | |||||||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaacat 16250287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 38299808 - 38299748
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  38299808 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 18074620 - 18074693
Alignment:
Q  44 aatcttatagagtccga---tctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataatt 114  Q
    |||||| ||||||||||   |||||| ||||||||  |||||| ||| ||||||||||||||||| ||||||||    
T  18074620 aatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggtataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 58405 - 58483
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  58405 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 58483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 13315074 - 13315152
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| |||| |||||  ||||||||||  |  ||||||| |||||||||  | ||||||||||||||    
T  13315074 atctaatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaaaggggtttaacatgttgt 13315152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 14928285 - 14928362
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtag 140  Q
    |||| ||||||| |||||||||||  |||  |||||||||||| | |||||||| ||||||  |||||||||||||||    
T  14928285 aatccaaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 15351751 - 15351828
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtag 140  Q
    |||| ||||||| |||||||||||  |||  |||||||||||| | |||||||| ||||||  |||||||||||||||    
T  15351751 aatccaaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 16550004 - 16550057
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| | ||||||||| |||||||||||||||||  | |||||||||||    
T  16550004 ctaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 16615658 - 16615605
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| | ||||||||| |||||||||||||||||  | |||||||||||    
T  16615658 ctaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 20252178 - 20252247
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacat 133  Q
    |||||||||||| ||| ||||||  ||||||||||  | ||||||||||||||||||  | |||||||||    
T  20252178 aatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaacat 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 3287800 - 3287744
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| |||| |||||  ||||||||||  || |||||||||||||||||    
T  3287800 aatctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaa 3287744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 43745716 - 43745656
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||| ||||||||||  ||||||||||  | |||||||||||| |||||    
T  43745716 atctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 8e-73; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 7828051 - 7827859
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7828051 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 7827952  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7827951 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 19655204 - 19655396
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19655204 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 19655303  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  19655304 gttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 23150260 - 23150452
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23150260 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 23150359  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||    
T  23150360 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaatttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 15890708 - 15890877
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  15890708 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttggga 15890807  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  15890808 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 27329980 - 27330131
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||||||||  ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27329980 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatt 27330079  T
Q  167 agg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaattt 217  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  27330080 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 27390720 - 27390871
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||||||||  ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27390720 ctaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatt 27390819  T
Q  167 agg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaattt 217  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  27390820 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 27125450 - 27125642
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| |||||||||||||||||||||||| ||| |||||||| ||| ||||||||||    
T  27125450 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaaaattgagattagcatgttgtag 27125549  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  27125550 gttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 18703647 - 18703451
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  18703647 aatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgtag 18703548  T
Q  141 gttgtagttatggaaatttgggaattag-gtttgaagttg----taattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||  ||||||||||    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18703547 gttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 18709582 - 18709386
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| ||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  18709582 aatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagaatgttgtag 18709483  T
Q  141 gttgtagttatggaaatttgggaattag-gtttgaagttg----taattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||  ||||||||||    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  18709482 gttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 24267905 - 24267801
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||    
T  24267905 aatcaaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgaga 24267806  T
Q  164 attag 168  Q
    |||||    
T  24267805 attag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 28948631 - 28948468
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgta-gttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||| |||||| ||| | ||||||||||    
T  28948631 aatctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttggg 28948532  T
Q  163 aattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||| |||||||||||||||||||   | |||||||||| ||||||||| ||||||||    
T  28948531 aattaggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaa 28948468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  71 ggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggt 170  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| ||||||||| ||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  171 tt-gaagttgtaattggttgtt 191  Q
    || |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 18928737 - 18928614
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||| |||| ||| |||||||     
T  18928737 aatctaaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttgga 18928638  T
Q  163 aattaggttt-gaagttgtaattg 185  Q
    |||||||||| |||||||||||||    
T  18928637 aattaggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 24550162 - 24550271
Alignment:
Q  62 ctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgg 161  Q
    |||| ||||||||| |||||||||||| |||| ||||| |||||||| ||||||||||||||  |||||||||||||||| ||||||| |||| ||||      
T  24550162 ctaacctaaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaa 24550261  T
Q  162 gaattaggtt 171  Q
    ||||||||||    
T  24550262 gaattaggtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 222
Target Start/End: Complemental strand, 19235179 - 19235021
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||| ||| ||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||  ||||||| | ||||   | ||  ||||||||     
T  19235179 aatctaagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg- 19235081  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||  ||||| |||||||    
T  19235080 attaggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgta 19235021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 19401146 - 19401028
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||||||| |||||||||||  ||| |||||||||||| |||| ||||||||| |||| ||||||| |||||||||||||||| ||| |||||| |||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaatt 19401048  T
Q  167 aggttt-gaagttgtaattg 185  Q
    ||||||  ||||||||||||    
T  19401047 aggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 27572122 - 27572198
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacat-gttgtaggtt 143  Q
    |||||||| |||| |||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 222
Target Start/End: Original strand, 30673398 - 30673550
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||| ||| ||||||||||| || ||||||||||| |||||||||||||| |||| ||| | ||||         ||||| |||    
T  30673398 aatctaaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttgga 30673489  T
Q  164 attagg-tttgaagttgtaa-ttggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    |||||| |||||| | |||| ||||||||||||||||||||||||   |||||||||||||    
T  30673490 attaggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgta 30673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 19167926 - 19167992
Alignment:
Q  157 tttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 19167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 31731903 - 31732009
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| ||||||||||| |||||| ||||||||||  |||||||||| ||||||  ||| ||| |||||||||||||||| |||  ||||| ||||    
T  31731903 ctaaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaat 31732002  T
Q  166 taggttt 172  Q
    |||||||    
T  31732003 taggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 15998942 - 15998878
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaac 131  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaac 15998878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 23501728 - 23501601
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaat-tgagtttaacatgttgtaggttgtagttat-ggaaatttgg 161  Q
    |||||||||||| |||| ||||||  |||  ||||||||| | || |||||||||||  ||| ||||||| |||||||||||||||| | ||||||||||    
T  23501728 aatctaaggtaagggtgagactaaccttcaataattctaaat-gtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgg 23501630  T
Q  162 gaattaggttt-gaagttgtaattggttg 189  Q
    ||||||||||| |||||||||||| ||||    
T  23501629 gaattaggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 23431400 - 23431466
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccg---atctaatctaaggtaaaggtgggactaa 87  Q
    |||||||||||||||||||||||||| |||||||||   ||||||||||||||||  ||||||||||    
T  23431400 cagagaagagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaa 23431466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 12041619 - 12041672
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| |||||||||||  |||| ||||||||||||||||||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 138
Target Start/End: Original strand, 19167849 - 19167923
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||| ||||| | ||| ||| ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  19167849 aatctaaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 15173452 - 15173505
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  15173452 ctaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 10446277 - 10446199
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  10446277 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 10446199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 23658146 - 23658089
Alignment:
Q  63 taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||||||| ||||||||||  |||| |||||  || |||||||||||||||||    
T  23658146 taatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaa 23658089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 26923709 - 26923761
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatgga-aatttgggaattagg 169  Q
    ||||||| |||||||||||||||||| ||||| | || |||||||||||||||    
T  26923709 aaattgaatttaacatgttgtaggttttagtttttgagaatttgggaattagg 26923761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataa 112  Q
    |||| ||||||||||| |||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 25091713 - 25091540
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  25091713 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 25091614  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25091613 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 15115278 - 15115109
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  15115278 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 15115179  T
Q  164 atta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15115178 attattttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 53630466 - 53630639
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  53630466 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 53630565  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  53630566 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 68 - 237
Target Start/End: Complemental strand, 11425995 - 11425825
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta 167  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 11425896  T
Q  168 gg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgtccatc 237  Q
    || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  11425895 ggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 63 - 232
Target Start/End: Original strand, 10356431 - 10356601
Alignment:
Q  63 taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  10356431 taatttaaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 10356530  T
Q  163 aattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  10356531 aattaggttttgaagttgtaattggtagttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 37019726 - 37019564
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  37019726 aatctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgaga 37019627  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  37019626 attaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaa 37019564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 42875857 - 42875684
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  42875857 atctaatttaaggtaagggtgggactaactttatataattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 42875758  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  42875757 gggaaataggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 16998585 - 16998412
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| ||||||||  ||| |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  16998585 atctaatttaaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaattt 16998486  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||| | ||||||    
T  16998485 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 19610384 - 19610211
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  19610384 atctaatttaaggtaagggtgagactaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 19610285  T
Q  160 gggaatt-aggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    | ||||| || ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  19610284 gagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgttaaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||| |    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| |||| |||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||| |    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 9924210 - 9924085
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||| |||| ||| |||||||     
T  9924210 aatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttgga 9924111  T
Q  163 aattaggttt-gaagttgtaattggt 187  Q
    |||||||||| |||||||||||||||    
T  9924110 aattaggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 184
Target Start/End: Complemental strand, 14549816 - 14549695
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||  |||||||| ||  ||||||| || ||||||||||||| |||||||||||||    
T  14549816 aatctaaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttggga 14549717  T
Q  164 attaggttt-gaagttgtaatt 184  Q
    ||||||||| ||||||||||||    
T  14549716 attaggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 19434555 - 19434672
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| | |||||||||||    
T  19434555 aatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttggga 19434654  T
Q  164 attaggttt-gaagttgt 180  Q
    |||| |||| ||||||||    
T  19434655 attaagtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 9870440 - 9870568
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||| ||| ||||||||||| ||||  ||||||||||||||||||||||| ||||||  ||| ||||| |||||||||||||| ||| ||||||||    
T  9870440 aatctaagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttggg 9870539  T
Q  163 -aatta-ggtttgaagttgtaattggttg 189  Q
     ||||| |||| |||||||||||||||||    
T  9870540 aaattagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 11478649 - 11478772
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| || |||||||||||||| ||||||||||| ||||||| ||||||| ||||||| ||| |||| ||| |||||||     
T  11478649 aatctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttgga 11478748  T
Q  163 aattaggttt-gaagttgtaattg 185  Q
    |||||||||| ||| |||||||||    
T  11478749 aattaggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 15613143 - 15613056
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgga 154  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||| ||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagttttgga 15613056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 51993614 - 51993527
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgga 154  Q
    ||||||||| |||||||||||  |||| |||||||||||||| ||||||||||||||  |||||||||||||||| ||||||| ||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttgga 51993527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 21249 - 21144
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| | || ||||||  |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||   ||||| ||||    
T  21249 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaat 21150  T
Q  166 taggtt 171  Q
    ||||||    
T  21149 taggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 26921707 - 26921774
Alignment:
Q  154 aaatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtg 220  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||   ||||||||||    
T  26921707 aaatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 2424379 - 2424439
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||| |||| |||||| |||||||||||||||||||||||||| |||||    
T  2424379 atctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10694218 - 10694297
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| |||| ||||||||||||||||||||||||  | |||||||||||    
T  10694218 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10907984 - 10908063
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| |||| ||||||||||||||||||||||||  | |||||||||||    
T  10907984 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 25513911 - 25513838
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacat 133  Q
    |||||||||||||||| ||||||||||  ||||||||||  | ||||||||||||||||||  | |||||||||    
T  25513911 atctaatctaaggtaatggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaacat 25513838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 35811376 - 35811428
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 21062694 - 21062611
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| ||||||||||| |||||||||||||||||  ||||| | || ||||||  ||||||| || |||||||||||||    
T  21062694 ctaaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagtt 21062611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 32466193 - 32466299
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaatt-gagtttaacatgttgtaggttgtagttatggaa-atttgggaa 164  Q
    ||||||||| |||| ||||||  |||| |||||||||||||| ||||||||| ||| |  ||||||||||| |||| ||||||| ||||| ||||  |||    
T  32466193 ctaaggtaagggtgagactaatcttctttaattctaagttgtgtaattctgagattcggatttaacatgttctaggatgtagttttggaagatttaagaa 32466292  T
Q  165 ttaggtt 171  Q
    |||||||    
T  32466293 ttaggtt 32466299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 9639089 - 9639010
Alignment:
Q  44 aatcttatagagtccgat---ctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| |||||||||||   |||||||||||||| ||||||||||  ||||||||||  | |||||| |||||||||||    
T  9639089 aatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 14187011 - 14186955
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattga 124  Q
    ||||||||| ||||||| ||| |||||||||||||||| ||||| |||||||||||||    
T  14187011 ctaaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 15009016 - 15008963
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  15009016 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 16296994 - 16296938
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| ||||||||||  ||||||||||  | ||||||||||||||||||    
T  16296994 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 40620585 - 40620509
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 142  Q
    ||||||||| ||||||| ||| |||||||||||||||||  | |||||||| ||||||  ||||||||| |||||||    
T  40620585 ctaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggt 40620509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 19022423 - 19022366
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaat 98  Q
    |||||| ||||||||||||   |||||||||||||||||| |||||| ||||||||||    
T  19022423 aatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 33243249 - 33243313
Alignment:
Q  26 gagaagagaaagcggtagaatcttatagagtcc---gatctaatctaaggtaaaggtgggactaa 87  Q
    |||||||||||||| ||||||||| ||||||||    |||||||||||||||| |||| ||||||    
T  33243249 gagaagagaaagcgttagaatcttgtagagtcccatcatctaatctaaggtaagggtgagactaa 33243313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 12424263 - 12424342
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  12424263 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 9638972 - 9638912
Alignment:
Q  157 tttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatt 216  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 9638912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 4687 - 4879
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4687 aatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 4786  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4787 gtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 460 - 633
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  460 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 559  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  560 gggaattaggttttgaagttgtaattggttgttaatagagtagaaaataagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 67 - 232
Target Start/End: Original strand, 695 - 861
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatt 794  T
Q  167 agg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  795 aggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 1265 - 1092
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||    
T  1265 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattgtaattt 1166  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  1165 gggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 32073 - 31881
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  32073 aatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 31974  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  31973 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 37380 - 37188
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  37380 aatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 37281  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  37280 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 77747 - 77574
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  77747 atctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 77648  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    | |||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||    
T  77647 gagaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 44 - 228
Target Start/End: Complemental strand, 19140843 - 19140656
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  19140843 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactac-tttctctaattctaagttgtataattctgaaattgagtttagcaagttgtag 19140745  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtg 228  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19140744 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtg 19140656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 6101749 - 6101918
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  6101749 aatctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttggga 6101848  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    || ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  6101849 atcaggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 78 - 232
Target Start/End: Original strand, 5082222 - 5082377
Alignment:
Q  78 gtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-tttgaag 176  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 5082321  T
Q  177 ttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5082322 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 20083638 - 20083812
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta 167  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  168 gg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgtccatctcat 241  Q
    || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||| ||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 42817880 - 42818072
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42817880 aatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 42817979  T
Q  141 gttgtagttatggaaatttgggaattag-gtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  42817980 gttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgttgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 5761593 - 5761421
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||||    
T  5761593 atctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaattt 5761495  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5761494 gggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| |||| |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 39935999 - 39936175
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaaca---tgttgtaggttgtagttatggaaa 156  Q
    ||||||| |||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||   ||||||||||||||||||||| ||    
T  39935999 atctaatttaaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgttgtaggttgtagttatgggaa 39936098  T
Q  157 tttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| || ||||||    
T  39936099 tttgcgaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||| |||||||| |    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg-t 170  Q
    |||| |||| |||||| |||||||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||  |||||| |||||||| |    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 22532128 - 22532290
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| |||||| ||||||    
T  22532128 aatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattggga 22532227  T
Q  164 attaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||  |||||||||||| |||||   | |||||||||| ||||||||| ||||||||    
T  22532228 attaggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaa 22532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 22536813 - 22536975
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| |||||| ||||||    
T  22536813 aatctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattggga 22536912  T
Q  164 attaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||  |||||||||||| |||||   | |||||||||| ||||||||| ||||||||    
T  22536913 attaggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaa 22536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 221
Target Start/End: Original strand, 20397506 - 20397656
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||    ||||| || ||     |||||||    
T  20397506 aatctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgttgtgat-----tttggga 20397596  T
Q  164 attagg-tttgaagttgtaatt-ggttgttaatagagtagaaaatctgttgaatttgtgt 221  Q
    |||||| ||| ||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  20397597 attaggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 235
Target Start/End: Original strand, 31722489 - 31722661
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| |||||||| || |||| || ||||||| |||||||||||||||| ||| |||||||     
T  31722489 aatctaagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttgga 31722588  T
Q  163 aattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgtcca 235  Q
    |||| ||||| ||||||||||||||||| |   ||||||| ||||||||||||||  ||||||| | |||||||    
T  31722589 aatttggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 20178593 - 20178704
Alignment:
Q  132 atgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaa-ttggttgttaatagagtagaaaatctgttgaatttgtgtagaagtga 229  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||    
T  20178593 atgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 20178692  T
Q  230 tgtccatctcat 241  Q
    ||| ||| ||||    
T  20178693 tgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 45469215 - 45469342
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||| |||| || ||||||| |||||||||| ||||| || |||||||||    
T  45469215 aatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttggg 45469314  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    ||||| |||| |||||||||||||||||    
T  45469315 aattatgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 189
Target Start/End: Original strand, 20022032 - 20022155
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatt 158  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||| || ||||||| |||||||||||||||        ||    
T  20022032 atctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--------tt 20022123  T
Q  159 tgggaattaggttt-gaagttgtaattggttg 189  Q
    |||||||||||||| |||||||||||||||||    
T  20022124 tgggaattaggtttagaagttgtaattggttg 20022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 17906848 - 17906953
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| |||||||||||||||  |||  ||||| |||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatt 17906947  T
Q  167 aggttt 172  Q
    ||||||    
T  17906948 aggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 39694298 - 39694435
Alignment:
Q  89 tttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta-ggtttgaagttgtaattggt 187  Q
    ||||||||||| |||||||||| ||||||||| ||  ||||||| |||||||||||||||| ||| ||||||||||||| |||| || ||||||||| ||    
T  39694298 tttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagacgttgtaattagt 39694397  T
Q  188 tgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||    | |||||| ||||||||||||| ||||||||    
T  39694398 tgtcgtaatagtagagaatctgttgaattggtgtagaa 39694435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 22317907 - 22318033
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||||||||||  ||| |||||||||||| |||| ||||||||| |||| ||||||| ||| ||||||||||||  || ||||||||    
T  22317907 aatctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttggg 22318005  T
Q  163 aattaggttt-gaagttgtaattggttg 189  Q
    | |||||||| |||||||||||||||||    
T  22318006 atttaggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 36727034 - 36727143
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| ||||||||||||||||| ||||||||||| ||||||  ||||||| |||||||||||||||| | |  ||||| |    
T  36727034 aatctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgag 36727133  T
Q  163 aattaggttt 172  Q
    ||||||||||    
T  36727134 aattaggttt 36727143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 4380609 - 4380669
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  4380609 atctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 23419494 - 23419374
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaa-atttgggaa 164  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||||| |||||  |||||||| ||||||| ||||||| ||||| ||||  |||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagttttggaagatttaagaa 23419395  T
Q  165 ttaggtttgaagttgtaattg 185  Q
    |||||||  |||||| |||||    
T  23419394 ttaggttaaaagttggaattg 23419374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 23899983 - 23900092
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||| |||||| |||||||||||||||||  ||||| ||||| |||||| ||||||| |||||||| ||||||| |||  ||||| |    
T  23899983 aatctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgag 23900082  T
Q  163 aattaggttt 172  Q
    || |||||||    
T  23900083 aactaggttt 23900092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 19700214 - 19700131
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||| | ||| |  ||||||||||||||||||||||||    
T  19700214 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagtt 19700131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 22254819 - 22254741
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttg 144  Q
    ||||||||| ||||||||||| |||||||||||||||||  |||||||||| ||||||  ||||||| |||||||||||    
T  22254819 ctaaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 18761527 - 18761448
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| |||| |||||| ||||||||||||||||| ||||||||||||||    
T  18761527 aatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 23948316 - 23948211
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| ||||| |||||  |||| |||||||||||||||| |||||| ||| ||  ||||||| |||||||||||||||| |||  ||||| ||||    
T  23948316 ctaaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaat 23948217  T
Q  166 taggtt 171  Q
    ||||||    
T  23948216 taggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 22583659 - 22583727
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgt 135  Q
    ||||||||| ||||||| |||  |||| |||||||| ||||||||||||||||||||| ||||||||||    
T  22583659 ctaaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 23889852 - 23889784
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgt 135  Q
    ||||| ||| |||| || ||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  23889852 ctaagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 42265559 - 42265631
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta-ggtttgaagttgtaattggttg 189  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||||||||||| |||| ||||||| || ||||||    
T  42265559 aaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 26454761 - 26454708
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  26454761 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 22208329 - 22208269
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  22208329 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 22610263 - 22610335
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgtt 136  Q
    |||||||||||| ||||||||||| ||||||||||  | |||||||| ||||| |||  | ||||||||||||    
T  22610263 aatctaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgtt 22610335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 16198889 - 16198851
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagt 105  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  16198889 ctaaggtaaaagtgggactaactttctctaattctaagt 16198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 17158962 - 17159000
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagt 105  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  17158962 ctaaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 22345224 - 22345146
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| |||| ||||  | ||||||||||||||    
T  22345224 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaacatgttgt 22345146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 22356884 - 22356806
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| |||| ||||  | ||||||||||||||    
T  22356884 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattccgaaaaggggtttaacatgttgt 22356806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 23479135 - 23479097
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagt 105  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  23479135 ctaaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 25657511 - 25657589
Alignment:
Q  65 atctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 142  Q
    |||||| |||| ||||||| ||| |||||||||||||||||  | |||||||| ||||||  ||||||||| |||||||    
T  25657511 atctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggt 25657589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 36305903 - 36305837
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||| |||| || ||| ||||| ||||| || ||||||||||| |||||||||||||| ||||||||    
T  36305903 gtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 17218754 - 17218649
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgag-tttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||| ||| ||||||||||| |||||||| ||||||||  ||||||||||||| | || |||| ||  ||||||||||| ||| ||   ||||| |||||    
T  17218754 taagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaatt 17218655  T
Q  167 aggttt 172  Q
    ||||||    
T  17218654 aggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 19880875 - 19880838
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaag 104  Q
    ||||||||| ||||||||||| ||||||||||||||||    
T  19880875 ctaaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 21514743 - 21514695
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattct 116  Q
    |||||||| |||||||||| |||||||||||  | ||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataa 112  Q
    |||| ||||||||||| |||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 11266 - 11439
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  11266 atctaatttaaggtaagggtgagactaactttctctaattctaagttgtatatttctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 11365  T
Q  160 gggaatt-aggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  11366 gggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 3238 - 3069
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||||||    
T  3238 aatctaaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttggga 3139  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  3138 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  126 tttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtaga 224  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  225 agtgatgt 232  Q
    | ||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 64 - 232
Target Start/End: Original strand, 13388 - 13557
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  13388 aatctaaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttggga 13487  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  13488 attaggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 34399 - 34226
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  34399 atctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 34300  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  34299 gggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgttgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 6003 - 5916
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgga 154  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagttttgga 5916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 125; Significance: 2e-64; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 328280 - 328455
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattct--aagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaat 157  Q
    |||||| ||||||||| ||||||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||| || ||||||||||||||||    
T  328280 atctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatggaaat 328379  T
Q  158 ttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  328380 ttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 75834 - 75691
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggtt 171  Q
    |||| ||||||| ||| ||||||||||  || ||||||||||||||||||||||| || |||||||| | |||||  | ||  |||||||||||||||||    
T  75834 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaattaggtt 75735  T
Q  172 tgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtg 220  Q
         ||||||||||||||||||||| |||||||||  |||||||||||    
T  75734 -----ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 110222 - 110121
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggt 170  Q
    |||| |||| |||||| |||||||||||||||||  |||||||||| ||||||| ||||||| |||||||||||||||| |||  ||||| | |||||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggattaggt 110123  T
Q  171 tt 172  Q
    ||    
T  110122 tt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 72909 - 72841
Alignment:
Q  155 aatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    |||||| ||||||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  72909 aatttgtgaattaggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 73147 - 73069
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    ||||||| |||||||| ||||||||||| ||||||||||  | |||||||| ||||| |||  | ||||||||||||||    
T  73147 atctaatgtaaggtaagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaacatgttgt 73069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 66064 - 66138
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatg 134  Q
    ||||| |||||||||| |||||||||| |||||| ||||  |  |||||||||||||||||  | ||||||||||    
T  66064 atctattctaaggtaagggtgggactagatttctttaataatgggttgtataattctgaaaaagggtttaacatg 66138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 44 - 232
Target Start/End: Original strand, 21766 - 21958
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  21766 aatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagttctgaaattgaatttagcatgttgtag 21865  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||    
T  21866 gttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagttgaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 44 - 232
Target Start/End: Complemental strand, 58825 - 58633
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||  |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  58825 aatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgttgtag 58726  T
Q  141 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  58725 gttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 67 - 232
Target Start/End: Original strand, 168998 - 169164
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 169097  T
Q  167 agg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  169098 aggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 143663 - 143498
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatta 167  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttgggaatta 143564  T
Q  168 -ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
     | |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  143563 tgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 574 - 405
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||| |    
T  574 aatctaaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaa 475  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  474 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 232
Target Start/End: Complemental strand, 146779 - 146610
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  146779 aatctaaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 146680  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  146679 attaggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 67 - 232
Target Start/End: Complemental strand, 1218 - 1052
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| |||| |||||| |||  ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||    
T  1218 ctaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatt 1119  T
Q  167 agg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgt 232  Q
    ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  1118 aggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 29569 - 29711
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  29569 aatctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttggga 29668  T
Q  164 attagg-tttgaagttgtaattggttgttaatagagtagaaaat 206  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||    
T  29669 attaggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 21667 - 21539
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||||||  |||||||||||||||||||||| |||| |||| ||  |||||||  | |||| |||||||| |||||||||||||    
T  21667 aatctaaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttggga 21568  T
Q  164 attaggttt-gaagttgtaattggttgtt 191  Q
    |||| |||| |||||||||||||||||||    
T  21567 attatgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 24104 - 24235
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtag 140  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24104 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 24203  T
Q  141 gttgtagttatggaaatttgggaattaggttt 172  Q
    ||||||||||||| ||||||||||||||||||    
T  24204 gttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 180
Target Start/End: Original strand, 78177 - 78298
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  78177 atctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaattt 78276  T
Q  160 gggaattagg-tttgaagttgt 180  Q
    || ||||||| |||||||||||    
T  78277 ggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 193
Target Start/End: Complemental strand, 35546 - 35418
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||| |||||||||    
T  35546 aatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttggga 35449  T
Q  164 attagg-tttgaagttgtaattggttgttaa 193  Q
    |||||| |||||||| |||||||||||||||    
T  35448 attaggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 19809 - 19655
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||| | |||||||||||||||||||||||||||| |||||||||||| || |||||||| |||         |||||||||    
T  19809 aatctaaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgtg--------aatttggga 19718  T
Q  164 attaggtttg-aagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  19717 attaggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaa 19655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 112962 - 113125
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa--ttgagtttaacatgttgtaggttgtagttatggaaatttgg 161  Q
    |||||||| ||| ||||||||||| |||||||||||||||||  ||||| |||||||  |||| ||||||| ||||||||||||| || ||| |||||||    
T  112962 aatctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgg 113061  T
Q  162 gaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    ||||||||||| ||||||||||||||||||| | | |||||||||| ||||||||| ||||||||    
T  113062 gaattaggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaa 113125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 81619 - 81501
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattct-gaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||||||| |||||||||||  ||| ||||||||||  || || |||||  ||||||| ||||||| |||||||||||||||| ||| ||||||||||||    
T  81619 taaggtaagggtgggactaaccttcactaattctaa-atggatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 81521  T
Q  167 aggttt-gaagttgtaattg 185  Q
    |||||| |||||||||||||    
T  81520 aggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 225
Target Start/End: Original strand, 117806 - 117958
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg--aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaa 164  Q
    ||||||||| ||||||||||| |||||||||||||||||  ||||| ||||  ||||||| ||||||| |||| || ||||        || ||||||||    
T  117806 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgt--------aattttgggaa 117897  T
Q  165 ttaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||| ||||||||||||||||||| | | |||||||||||| ||||||| | ||||||    
T  117898 ttaggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaa 117958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 151
Target Start/End: Complemental strand, 2615 - 2524
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttat 151  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2615 atctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 16647 - 16532
Alignment:
Q  77 ggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaa 175  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||  |||||||||| ||||||||||||| ||||||||||| |||||||||| |||    
T  16647 ggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggtttagaa 16548  T
Q  176 gttgtaattggttgtt 191  Q
    ||||||||||||||||    
T  16547 gttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  71 ggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggt 170  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||  ||||||| || ||||||||||||| ||||||||| ||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  171 tt-gaagttgtaattggttgtt 191  Q
    || |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 225
Target Start/End: Complemental strand, 79109 - 78958
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaattt 159  Q
    ||||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||       ||||||||||        |    
T  79109 atctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcat-------gttgtagtta--------t 79025  T
Q  160 gggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||    
T  79024 gggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatttgtgtagaa 78958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 225
Target Start/End: Original strand, 10749 - 10911
Alignment:
Q  62 ctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgg 161  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||| ||| ||||| ||  ||||||| |||||||||| ||||| ||| |||||||    
T  10749 ctaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgg 10846  T
Q  162 gaatta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaa 225  Q
    |||||| |||| |||||||||||||||||||   | |||||| ||||| ||||||| ||||||||    
T  10847 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaa 10911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 5039 - 5120
Alignment:
Q  62 ctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggtt 143  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||||| ||| ||||| ||  ||||||| ||||||||||    
T  5039 ctaacctaaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 1050 - 1226
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatt 158  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||  |||||||||| ||||||| ||||||| ||||||||||| |||| ||  ||||    
T  1050 atctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagttttgagaatt 1149  T
Q  159 tgggaatta-ggtttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaagtgatgtcca 235  Q
    ||||| ||| |||| |||||||||||| |||| |   ||||||| ||||||||||||||  ||||||| | |||||||    
T  1150 tgggatttagggttagaagttgtaattagttgatttaagagtag-aaatctgttgaattgatgtagaaataatgtcca 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 17893 - 17992
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||||||| |||||||||||| |||| |||||||   ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  17893 cagagaagagaaaacggtagaatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 106047 - 106175
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| |||| |||||| |||||||||||||||||||||| |||| |||| ||  ||||||| || ||||  ||||||| |||||||||||||    
T  106047 aatctaaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttggga 106146  T
Q  164 attaggttt-gaagttgtaattggttgtt 191  Q
    ||||||||| || ||||||||||||||||    
T  106147 attaggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 4705 - 4830
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||| ||||   | |||||||     
T  4705 aatctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttgga 4804  T
Q  163 aattaggttt-gaagttgtaattggt 187  Q
    |||||||||| |||||||| ||||||    
T  4805 aattaggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 61801 - 61900
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||| |||||||||||||||||| |||| |||||||   ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  61801 cagagaaaagaaagcggtagaatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 135503 - 135625
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||||||||||  ||| |||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||| ||| |||||||||||    
T  135503 ctaaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 135601  T
Q  166 tag-gtttgaagttgtaattggtt 188  Q
    ||| ||| ||||||| ||||||||    
T  135602 tagagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 67177 - 67068
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||||  |||||||  ||||||||||||||| | | ||||||||    
T  67177 aatctaaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttggg 67078  T
Q  163 aattaggttt 172  Q
    ||| ||||||    
T  67077 aataaggttt 67068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 8698 - 8571
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||||||||||  ||| |||||||||||| |||| ||||||||| |||| ||||||| |||||||||||||||| ||| ||||||||    
T  8698 aatctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttggg 8600  T
Q  163 -aatta-ggtttgaagttgtaattggttg 189  Q
     ||||| |||| |||||||||||||||||    
T  8599 aaattagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 2021 - 2143
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    |||| ||| ||||||| |||  ||| |||||||||||| |||| ||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||    
T  2021 taagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaatt 2119  T
Q  167 aggttt-gaagttgtaattggttg 189  Q
    ||||||  ||||||||||||||||    
T  2120 aggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 222
Target Start/End: Complemental strand, 2945 - 2793
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttggga 163  Q
    |||||||||||| ||||||| ||| ||||||||||| || |||||||||||||||||||||||||| |||||||| | ||||         |||||| ||    
T  2945 aatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtga 2854  T
Q  164 attagg-tttgaagttgt-aattggttgttaatagagtagaaaatctgttgaatttgtgta 222  Q
    |||||| |||||| | || ||||||||||||||||| |||||||||  |||||||||||||    
T  2853 attaggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgta 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 96454 - 96369
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||| ||  ||||||| ||||||||||||||||    
T  96454 aatctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagtt 96369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 53; Significance: 2e-21; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 19748 - 19605
Alignment:
Q  78 gtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggtt-tgaag 176  Q
    |||||| ||||||||||||||  || ||| |||||||||||||||||||||| |||||||| | ||||   | ||  |||||| |||||||||| |||||    
T  19748 gtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattaggttatgaag 19649  T
Q  177 ttgtaattggttgttaatagagtagaaaatctgttgaatttgtgt 221  Q
    ||||||||| ||||||||| | |||||||||  ||||||||||||    
T  19648 ttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 5310 - 5182
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggtt 171  Q
    |||| ||||||| ||| ||||||||||  || |||||||||||||||||||||||||  |||||||| | ||||         ||||||||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgtg--------aatttgggaattacgtt 5219  T
Q  172 t-gaagttgtaattggttgttaatagagtagaaaatc 207  Q
    | ||||||||||||||||||||||||| |||||||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatc 5182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 207
Target Start/End: Complemental strand, 11430 - 11302
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggtt 171  Q
    |||| ||||||| ||| ||||||||||  || ||||||| |||||||||||||||||  |||||||| | ||||         |||||||||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgtg--------aatttgggaattaggtt 11339  T
Q  172 t-gaagttgtaattggttgttaatagagtagaaaatc 207  Q
    | ||||||||||||||||||||||||| |||||||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatc 11302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 5514 - 5454
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||||||||  | ||||||||||||||||||    
T  5514 atctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 19916 - 19838
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||||||||||||||| ||| |||||| |||||||||||  |  ||||||| ||||| |||  | ||||||||||||||    
T  19916 atctaatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgt 19838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 11676 - 11603
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacat 133  Q
    ||||||| |||| ||| |||||||||||||||||||||   |  |||||||||||||||||  | |||||||||    
T  11676 atctaatgtaagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaacat 11603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 126311 - 126407
Alignment:
Q  75 aaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggtt 171  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||||| ||   ||||| ||||||||||    
T  126311 aaggtgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaattaggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 3048 - 3174
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||| ||||||| |||||||||||  |||  ||||||||||| |||| ||||||||| |||| ||||||| |||||||||||||||| ||| ||||| ||    
T  3048 aatccaaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttagg 3146  T
Q  163 aatta-ggtttgaagttgtaattggttg 189  Q
    ||||| |||| |||||||||||||||||    
T  3147 aattagggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 1856 - 1917
Alignment:
Q  77 ggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  1856 ggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 20007 - 19895
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| ||||||||||| |||||||||||||||||  |||||||||| ||||||  ||||||| |||||||||||||||| |||  ||||| ||||    
T  20007 ctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaat 19909  T
Q  166 taggtttgaagttg 179  Q
    |||| || ||||||    
T  19908 tagggttaaagttg 19895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 13911 - 13851
Alignment:
Q  157 tttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatt 216  Q
    |||||||||||||||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  13911 tttgggaattaggtttagaagttgtaattggttgatttaagagtagataatctgatgaatt 13851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 19268 - 19207
Alignment:
Q  59 gatctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  19268 gatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 189
Target Start/End: Complemental strand, 7330 - 7205
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgg-gaa 164  Q
    ||||||| | |||||||||||  |||| ||||||||||||||||||||||| ||||||  ||| |||||||||||||| ||||| ||| |||||||  ||    
T  7330 ctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaa 7231  T
Q  165 tta-ggtttgaagttgtaattggttg 189  Q
    ||| |||| |||||||||||||||||    
T  7230 ttagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 60948 - 60843
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| | || ||||||  |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||   ||||| ||||    
T  60948 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaat 60849  T
Q  166 taggtt 171  Q
    ||||||    
T  60848 taggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 2192 - 2252
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  2192 atctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  112 attctgaaattgagtttaacatg-ttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgt 190  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 20085 - 20234
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| || ||||||||  ||| ||||||||||| |||||||||||| ||||||| ||||||| |||||||||| ||||| ||| |||||||||||    
T  20085 ctaaggtaagggcgggactaaccttcactaattctaag-tgtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaat 20182  T
Q  166 taggttt-gaagttgtaa-ttggttgttaatagagtagaaaatctgttgaatt 216  Q
    || |||| |||||||||| ||||||| |   ||||||| ||||||||||||||    
T  20183 tatgtttagaagttgtaatttggttgatttaagagtag-aaatctgttgaatt 20234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 2980 - 2881
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||||||| |||||||||||| ||||||| ||||   ||||||||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  2980 cagagaagagaaaacggtagaatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 4438 - 4333
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| | |||||||||  |||| |||||||||||||||||||||||| || ||  |||||||||||||||||||||||| ||   ||||| ||||    
T  4438 ctaaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaat 4339  T
Q  166 taggtt 171  Q
    ||||||    
T  4338 taggtt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 218
Target Start/End: Original strand, 26630 - 26779
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    ||||||| |||| ||||||| ||| ||||| ||||| || |||||||||||||| |||||||||||| |||||||| | ||||         ||||||||    
T  26630 aatctaaagtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttggg 26721  T
Q  163 aattagg-tttgaagttgtaa-ttggttgttaatagagtagaaaatctgttgaatttg 218  Q
    ||||||| |||||| | |||| |||||||||||||||||||||||||  |||||||||    
T  26722 aattaggttttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 4993 - 4910
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| |||||||||||  |||| |||||||||||||||||||||||| | |||  |||||||||||||||| |||||||    
T  4993 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagtt 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 398615 - 398532
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagtt 149  Q
    ||||||||| |||||||||||  |||| |||||||| ||||||||||||||| |||||  |||||||||||||||| |||||||    
T  398615 ctaaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagtt 398532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 10846 - 10780
Alignment:
Q  72 gtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    |||| ||||||| ||| ||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  10846 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgt 10780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 15325 - 15272
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| |||||||||    
T  15325 ctaaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 29441 - 29340
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||||||||||  |||| |||||||||||||||| |||||| ||| ||  ||||||| |||||||||||||||| |||  ||||| ||||    
T  29441 ctaaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaat 29342  T
Q  166 ta 167  Q
    ||    
T  29341 ta 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 5716 - 5761
Alignment:
Q  77 ggtgggactaaatttctctaattctaagttgtataattctgaaatt 122  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5716 ggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 5297 - 5353
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattct 116  Q
    |||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  5297 atctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 4696 - 4577
Alignment:
Q  106 tgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttg--ttaatagagtaga 202  Q
    ||||| ||||| ||||||| ||||||| ||| |||||||| ||| ||| |||||| ||||||||||| |||||||||||| ||||  |||||||    ||    
T  4696 tgtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgtaattagttggtttaatag---tga 4600  T
Q  203 aaatctgttgaatttgtgtagaa 225  Q
    ||||||||||||||  |||||||    
T  4599 aaatctgttgaattgatgtagaa 4577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 52543 - 52648
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctga-aattgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||| ||| |||||||||||  |||  |||||||||||||| ||||||||| |||||  |||||||||||||||| ||||||| ||   ||||| ||||    
T  52543 ctaagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaat 52642  T
Q  166 taggtt 171  Q
    ||||||    
T  52643 taggtt 52648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 5420 - 5318
Alignment:
Q  66 tctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaa 164  Q
    |||||||||| |||||||||||  ||| ||||||||||| ||||| |||||| ||||||| ||||||||| ||||| |||||||| ||  |||| |||||    
T  5420 tctaaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaa 5323  T
Q  165 ttagg 169  Q
    |||||    
T  5322 ttagg 5318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 5082 - 5006
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 142  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  5082 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 5082 - 5006
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 142  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  5082 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 69852 - 69928
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 142  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  69852 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 69928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 194
Target Start/End: Original strand, 158818 - 158949
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttggg 162  Q
    |||||||||||| |||||||||||  |||  ||||||| |||  ||| ||||| ||| |||  ||||||| |||||||||||||||| ||| ||||||||    
T  158818 aatctaaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttggg 158916  T
Q  163 aatta-ggtttgaagttgtaattggttgttaat 194  Q
    ||||| |||| ||||||| || |||||| ||||    
T  158917 aattagggttagaagttgcaaatggttgataat 158949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 18594 - 18670
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaat 98  Q
    ||||||||||||||||  |||||||| ||||||||||||   ||||||||||||| ||||||||||  ||||||||||    
T  18594 cagagaagagaaagcga-agaatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 6619 - 6686
Alignment:
Q  154 aaatttgggaattaggttt-gaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtg 220  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||| |||   ||||||||||    
T  6619 aaatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 6497 - 6575
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgt 138  Q
    ||||||||||||||||||| |||||||  ||||||||||  |  ||||||| |||||||||  | ||||||||||||||    
T  6497 atctaatctaaggtaaaggcgggactacctttctctaataatgggttgtatgattctgaaaaggggtttaacatgttgt 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 9112 - 9011
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt 166  Q
    ||||||||| |||||||||||  |||  ||||||| |||  | ||||||||||| ||  ||||||| |||||||||||||||| | | ||||||||||||    
T  9112 ctaaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatt 9014  T
Q  167 agg 169  Q
    |||    
T  9013 agg 9011  T

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Target: scaffold0625 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 5860 - 5913
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||||||||  ||||| |||||||||||||||||  |||||||||||||    
T  5860 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 5913  T

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Target: scaffold0436 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 9013 - 8960
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  9013 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

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Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 21150 - 21097
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  21150 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

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Target: scaffold0138; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 34165 - 34112
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||||| ||||||||||| |||||||||||||||||  | |||||||||||    
T  34165 ctaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

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Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 11252 - 11193
Alignment:
Q  24 cagagaagagaaagcggtagaatcttatagagtccg---atctaatctaaggtaaaggtg 80  Q
    |||||| ||||||||||||||||||| |||||||||   |||||||||||||||| ||||    
T  11252 cagagacgagaaagcggtagaatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

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Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 35514 - 35586
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaatt-aggtttgaagttgtaattggttg 189  Q
    ||||||| |||||||  ||||||||||||||| ||| |||||||||||| ||||| ||||||| || ||||||    
T  35514 aaattgaatttaacaacttgtaggttgtagttttgggaatttgggaattaaggttagaagttgcaaatggttg 35586  T

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Target: scaffold0104 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 15010 - 14938
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgt 138  Q
    ||||||| | |||||||||||| || | ||||||||||||||| ||||||| ||||||  |||||||||||||    
T  15010 ctaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattggatttaacatgttgt 14938  T

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Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 17030 - 16958
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgt 138  Q
    ||||||| | |||||||||||| || | ||||||||||||||| ||||||| ||||||  |||||||||||||    
T  17030 ctaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattggatttaacatgttgt 16958  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 26783 - 26727
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||| ||||||| ||| ||||||||||| || |||||||||||||||||    
T  26783 aatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

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Target: scaffold0308 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 13442 - 13391
Alignment:
Q  118 aaattgagtttaacatgttgtaggttgtagttatggaaatttgggaattagg 169  Q
    ||||||| ||||||| ||||||||||| |||| ||| |||||||||||||||    
T  13442 aaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattagg 13391  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 31161 - 31060
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa-ttgagtttaacatgttgtaggttgtagttatggaaatttgggaat 165  Q
    ||||||||| |||||||||||  |||  ||||||| |||  | ||||||||||| |||  ||||||| |||||||||||||||| ||| |||||||||||    
T  31161 ctaaggtaagggtgggactaaccttcaataattctgagta-tgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaat 31064  T
Q  166 tagg 169  Q
    ||||    
T  31063 tagg 31060  T

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Target: scaffold1128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 510 - 448
Alignment:
Q  108 tataattctgaaattgagtttaacatgttgtaggttgtagttatg-gaaatttgggaattagg 169  Q
    ||||||||||||||||  |||||||||||||||||| ||||| || | | |||||||||||||    
T  510 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattagg 448  T

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Target: scaffold0411 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 13413 - 13498
Alignment:
Q  64 aatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagtt 149  Q
    |||||||||||| |||||||||||  |||  ||||||||||  || |||||||| ||| ||| ||||||| ||||||||||||||||    
T  13413 aatctaaggtaagggtgggactaaccttcaataattctaag-ggtttaattctgaaaactgaatttaacaagttgtaggttgtagtt 13498  T

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Target: scaffold0601 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 196 - 233
Alignment:
Q  68 taaggtaaaggtgggactaaatttctctaattctaagt 105  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

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Target: scaffold0431 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 5712 - 5633
Alignment:
Q  44 aatcttatagagtccgatc---taatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||| ||||||||||||   |||| |||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  5712 aatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 5633  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 29215 - 29268
Alignment:
Q  67 ctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||  |||||||||| |||||||||||||||||  | |||||||||||    
T  29215 ctaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

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Target: scaffold0878 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 3414 - 3474
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| ||||||||||  ||||||||||  |  ||||||| |||||||||    
T  3414 atctaatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaa 3474  T

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Target: scaffold0853 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 2446 - 2506
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    ||||||| |||||||| ||||||||||  ||||||||||  |  |||||||||||||||||    
T  2446 atctaatttaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2506  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 28387 - 28451
Alignment:
Q  126 tttaacatgttgtaggttgtagttatggaaatttgggaatta-ggtttgaagttgtaattggttg 189  Q
    ||||||| |||||||||||||||| ||| ||||||| ||||| |||| ||||||| || ||||||    
T  28387 tttaacaagttgtaggttgtagttttgggaatttggaaattagggttagaagttgcaaatggttg 28451  T

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Target: scaffold0061 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 14578 - 14638
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| |||| |||||  ||||||||||  |  |||||||||||||||||    
T  14578 atctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

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Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 23636 - 23696
Alignment:
Q  60 atctaatctaaggtaaaggtgggactaaatttctctaattctaagttgtataattctgaaa 120  Q
    |||||||||||||||| |||| |||||  ||||||||||  |  |||||||||||||||||    
T  23636 atctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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