View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6863A_low_196 (Length: 248)

Name: NF6863A_low_196
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6863A_low_196
NF6863A_low_196
[»] chr7 (9 HSPs)
chr7 (14-226)||(23983290-23983502)
chr7 (10-100)||(36449287-36449376)
chr7 (45-148)||(9107308-9107410)
chr7 (10-72)||(22567909-22567970)
chr7 (10-118)||(9427899-9428007)
chr7 (10-58)||(28534308-28534355)
chr7 (186-229)||(36449164-36449207)
chr7 (132-218)||(8745244-8745330)
chr7 (13-221)||(3478440-3478647)
[»] chr2 (17 HSPs)
chr2 (19-244)||(10173368-10173593)
chr2 (10-226)||(16952162-16952380)
chr2 (10-226)||(17022827-17023045)
chr2 (10-226)||(17060133-17060351)
chr2 (36-157)||(20572226-20572346)
chr2 (132-218)||(34230292-34230378)
chr2 (10-89)||(27879932-27880011)
chr2 (13-93)||(12343037-12343116)
chr2 (14-63)||(4974992-4975042)
chr2 (14-63)||(4992900-4992950)
chr2 (10-72)||(13699083-13699144)
chr2 (10-71)||(22884931-22884991)
chr2 (14-117)||(27740153-27740255)
chr2 (132-218)||(7696053-7696139)
chr2 (146-216)||(41086715-41086785)
chr2 (10-59)||(25504706-25504754)
chr2 (13-88)||(41086572-41086648)
[»] chr1 (14 HSPs)
chr1 (10-226)||(16577344-16577561)
chr1 (12-215)||(41126271-41126462)
chr1 (10-89)||(38548856-38548934)
chr1 (13-99)||(16148987-16149073)
chr1 (10-89)||(38544535-38544613)
chr1 (132-218)||(16147649-16147735)
chr1 (10-93)||(32882584-32882668)
chr1 (132-218)||(6583120-6583206)
chr1 (10-72)||(17033810-17033871)
chr1 (132-218)||(31290923-31291009)
chr1 (21-100)||(10785252-10785330)
chr1 (65-93)||(24659146-24659174)
chr1 (10-92)||(31290799-31290880)
chr1 (41-117)||(49820311-49820387)
[»] chr5 (9 HSPs)
chr5 (10-235)||(17853851-17854073)
chr5 (13-165)||(26045746-26045901)
chr5 (16-100)||(33258665-33258750)
chr5 (12-72)||(39183985-39184044)
chr5 (10-59)||(8731153-8731201)
chr5 (13-100)||(14302226-14302314)
chr5 (41-89)||(24072094-24072142)
chr5 (187-235)||(24072226-24072274)
chr5 (44-92)||(39024259-39024306)
[»] chr6 (5 HSPs)
chr6 (14-226)||(32935126-32935337)
chr6 (135-218)||(20701710-20701793)
chr6 (13-93)||(20701583-20701664)
chr6 (44-152)||(21266263-21266369)
chr6 (41-117)||(33968443-33968518)
[»] chr4 (10 HSPs)
chr4 (44-148)||(12296322-12296426)
chr4 (18-221)||(19673188-19673392)
chr4 (18-221)||(19815009-19815213)
chr4 (13-100)||(22810943-22811029)
chr4 (13-100)||(48098546-48098632)
chr4 (13-100)||(49747739-49747826)
chr4 (10-85)||(20632265-20632339)
chr4 (13-93)||(38637016-38637095)
chr4 (132-218)||(49528163-49528249)
chr4 (44-89)||(46487477-46487522)
[»] scaffold1613 (1 HSPs)
scaffold1613 (10-89)||(814-892)
[»] chr3 (12 HSPs)
chr3 (75-218)||(39021122-39021267)
chr3 (41-244)||(823246-823450)
chr3 (41-100)||(14879648-14879708)
chr3 (10-57)||(32010016-32010063)
chr3 (132-218)||(25647777-25647863)
chr3 (10-91)||(37123601-37123683)
chr3 (13-93)||(14194152-14194229)
chr3 (68-113)||(23328188-23328233)
chr3 (10-89)||(25594328-25594406)
chr3 (10-117)||(27399140-27399246)
chr3 (16-91)||(28937498-28937574)
chr3 (13-92)||(33143733-33143813)
[»] chr8 (6 HSPs)
chr8 (10-134)||(17720503-17720626)
chr8 (13-93)||(10248349-10248430)
chr8 (132-218)||(17656906-17656992)
chr8 (13-100)||(12197857-12197945)
chr8 (13-100)||(12442285-12442373)
chr8 (3-143)||(15906839-15906978)
[»] scaffold0063 (1 HSPs)
scaffold0063 (10-218)||(58218-58430)
[»] scaffold0050 (1 HSPs)
scaffold0050 (13-100)||(36920-37005)


Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 23983502 - 23983290
Alignment:
Q  14 caccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaat 113  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  23983502 caccacctaaaacagactcattcacgaaaacaaccactgaaaaacgatatacataactacccatcatcactactcaccccaaaagaagaccgctctaaat 23983403  T
Q  114 gaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccga 213  Q
    |||||||||| ||||||||| ||||| ||||||| ||||||||| ||||||||||||| |||||||  || |||||||||||||||||||||||||||||    
T  23983402 gaaattctcggtcctcatcatcaaagctgaaccagatccgaaaagctcatattcgaaagatcattcaactgtcaccacctctcaacctccgatacaccga 23983303  T
Q  214 aagaacacaaaaa 226  Q
    |||||||||||||    
T  23983302 aagaacacaaaaa 23983290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 100
Target Start/End: Complemental strand, 36449376 - 36449287
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||||||||| |||||  |||||| |||| ||| |||||||||||||| ||||||||| ||||||||||||||||| | ||||||    
T  36449376 acatcaccacctaaaatagactacttcacg-aaacaaccgctgaaaaacgatatccataaccactcatcgtcactactcaccacaaaagaa 36449287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 9107410 - 9107308
Alignment:
Q  45 gaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttgaa 144  Q
    ||||| || |||||||||| ||||||||||||||| ||||||||| ||| ||| ||  || ||||||||||||  | | ||||||||||||||||||||     
T  9107410 gaccattggaaaacgatatccataaccacccatcgccactactcatcccaaaataactcccctctaaatgaaacac-ccatcctcatcaccaaagttgag 9107312  T
Q  145 ccac 148  Q
    ||||    
T  9107311 ccac 9107308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 22567909 - 22567970
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 72  Q
    ||||||||||||||||||||||  |||||| |||| |||||||||||||| ||| ||||||||    
T  22567909 acatcaccacctaaaacagactctttcacg-aaacaaccactgaaaaacggtatccataacca 22567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 9427899 - 9428007
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctct 109  Q
    ||||||| |||||||||| | |  |||||| | || |||||| ||||| ||||| ||||||||||| ||||||||||||| ||| ||| |  | | ||||    
T  9427899 acatcactacctaaaacaaattctttcacgaagacaaccactaaaaaatgatatccataaccacccgtcgtcactactcatccctaaatagcatccctct 9427998  T
Q  110 aaatgaaat 118  Q
    |||||||||    
T  9427999 aaatgaaat 9428007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 28534308 - 28534355
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaac 58  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  28534308 acatcaccacctaaaacagactctttcacg-aaacgaccactgaaaaac 28534355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 36449207 - 36449164
Alignment:
Q  186 caccacctctcaacctccgatacaccgaaagaacacaaaaataa 229  Q
    ||||||||||||||||||||| ||||||||||| || |||||||    
T  36449207 caccacctctcaacctccgatccaccgaaagaaaaccaaaataa 36449164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 8745330 - 8745244
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||| ||| ||||||||||||| ||| |||  |||| ||||| | |||  ||| ||||||| ||||||||| |||||||||||    
T  8745330 caccaaagctgagccacatccgaaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaa 8745244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 3478647 - 3478440
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaa 111  Q
    |||||| || |||||||| | |||||| | ||||| |||| |||| |||||| ||| |||| || ||||||||||||||||| |||||| ||  ||| ||    
T  3478647 tcaccaactcaaacagacgtcttcacgaatacgac-actgtaaaagcgatatccatcaccaaccgtcgtcactactcacccc-aaagaacactcctcaaa 3478550  T
Q  112 atgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacacc 211  Q
    || ||| || |  |||||| |||||||| | | |||  || |||||  ||| || ||||| ||||||| |||  | ||||||||| | ||||||| ||||    
T  3478549 attaaactcccagtcctcaacaccaaagcttagccaactcagaaaagttcacatccgaaagatcattcagcttccgccacctctcgatctccgatccacc 3478450  T
Q  212 gaaagaacac 221  Q
    ||||||||||    
T  3478449 gaaagaacac 3478440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 244
Target Start/End: Original strand, 10173368 - 10173593
Alignment:
Q  19 cctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 117  Q
    |||||||||||| | |||| | ||||||| |||| ||||||||||||||  ||||| ||||||||||||||||||| |||||| ||  ||| |||| |||    
T  10173368 cctaaaacagacgtcttcatgaaaacgactactgtaaaaacgatatacaacaccactcatcgtcactactcacccc-aaagaatactcctcaaaattaaa 10173466  T
Q  118 ttctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaaga 217  Q
     ||||  |||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||||||  ||  ||||||||||| ||||||||| ||||||||||    
T  10173467 ctctcagtcctcaacaccaaagctgagccacatccgaaaagctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaaaga 10173566  T
Q  218 acacaaaaataaccccaacaccaaact 244  Q
    |||| || | || ||||| ||||||||    
T  10173567 acaccaacaaaagcccaaaaccaaact 10173593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 16952162 - 16952380
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgacc-actg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgct 107  Q
    |||||||||| ||||||||||   |||||| |||| | | |||| ||||| ||||| ||| ||||| ||||||||||||||||||| |||||| ||| ||    
T  16952162 acatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactcacccccaaagaacacccct 16952261  T
Q  108 ctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgata 207  Q
    |||||||||| || |  |||||| |||||||||||| ||||||||||||| ||| ||| ||||| ||| ||  |||  |||||||||||||||||||||     
T  16952262 ctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatc 16952361  T
Q  208 caccgaaagaacacaaaaa 226  Q
    |||||||||||||| ||||    
T  16952362 caccgaaagaacaccaaaa 16952380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 17022827 - 17023045
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgacc-actg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgct 107  Q
    |||||||||| ||||||||||   |||||| |||| | | |||| ||||| ||||| ||| ||||| ||||||||||||||||||| |||||| ||| ||    
T  17022827 acatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactcacccccaaagaacacccct 17022926  T
Q  108 ctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgata 207  Q
    |||||||||| || |  |||||| |||||||||||| ||||||||||||| ||| ||| ||||| ||| ||  |||  |||||||||||||||||||||     
T  17022927 ctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatc 17023026  T
Q  208 caccgaaagaacacaaaaa 226  Q
    |||||||||||||| ||||    
T  17023027 caccgaaagaacaccaaaa 17023045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 17060133 - 17060351
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgacc-actg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgct 107  Q
    |||||||||| ||||||||||   |||||| |||| | | |||| ||||| ||||| ||| ||||| ||||||||||||||||||| |||||| ||| ||    
T  17060133 acatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactactcacccccaaagaacacccct 17060232  T
Q  108 ctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgata 207  Q
    |||||||||| || |  |||||| |||||||||||| ||||||||||||| ||| ||| ||||| ||| ||  |||  |||||||||||||||||||||     
T  17060233 ctaaatgaaactcccagtcctcaacaccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttagcttccaccacctctcaacctccgatc 17060332  T
Q  208 caccgaaagaacacaaaaa 226  Q
    |||||||||||||| ||||    
T  17060333 caccgaaagaacaccaaaa 17060351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 20572346 - 20572226
Alignment:
Q  36 cacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcacc 135  Q
    |||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||| | |||||| ||| |||||||||||| ||||  ||||||||||     
T  20572346 cacgaaaacgaccactgaaaaacgatatccataaccacc-atcgccactactcacctcaaaagaacacccctctaaatgaaactctcattcctcatcact 20572248  T
Q  136 aaagttgaaccacatccgaaaa 157  Q
    |||| | ||||| |||||||||    
T  20572247 aaagctaaaccatatccgaaaa 20572226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 34230378 - 34230292
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||||||| ||||||| ||||| ||| |||| |||| ||||||| |||  ||||||||||||||||||||| |||||||||||    
T  34230378 caccaaagttgagccacatctgaaaagctcttatttgaaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaa 34230292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 27879932 - 27880011
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 89  Q
    ||||||||||||||||||||||  |||| | |||||||| ||||||||||| || ||||||||| ||||  |||||||||    
T  27879932 acatcaccacctaaaacagactccttcaggaaaacgacctctgaaaaacgaaatccataaccactcatcaccactactca 27880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 12343116 - 12343037
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 93  Q
    |||||||||||||||||||  |||||| |||||||| ||| ||||||||||| |  |||||| |||||||||||||||||||    
T  12343116 tcaccacctaaaacagactccttcacgaaaacgacctctgtaaaaacgatatcc--aaccactcatcgtcactactcacccc 12343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 4975042 - 4974992
Alignment:
Q  14 caccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatat 63  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4975042 caccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatat 4974992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 4992950 - 4992900
Alignment:
Q  14 caccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatat 63  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4992950 caccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatat 4992900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 13699083 - 13699144
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 72  Q
    |||||||||||||||||| |||  || ||| ||||||||||||||||||| ||||||||||||    
T  13699083 acatcaccacctaaaacacactcttttacg-aaacgaccactgaaaaacggtatacataacca 13699144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 22884931 - 22884991
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacc 71  Q
    ||||||||||||||||||||||  |||||| ||||||||||||| |||||| || |||||||    
T  22884931 acatcaccacctaaaacagactccttcacg-aaacgaccactgacaaacgaaatccataacc 22884991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 27740255 - 27740153
Alignment:
Q  14 caccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaat 113  Q
    |||||||||| ||| |||  |||||| |||| ||||||||| |||||||| ||||||||| | ||| ||||||||| |||  || || ||| ||||||||    
T  27740255 caccacctaatacaaactccttcacg-aaactaccactgaagaacgatattcataaccactcgtcgccactactcatcccagaataacacccctctaaat 27740157  T
Q  114 gaaa 117  Q
    ||||    
T  27740156 gaaa 27740153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 7696139 - 7696053
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||||||| ||||||||  ||| ||| ||| ||||| ||||||| |||  ||||||||| | |||| |||| |||||||||||    
T  7696139 caccaaagttgagccacatcctcaaatctcctatccgaaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaa 7696053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 41086715 - 41086785
Alignment:
Q  146 cacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaag 216  Q
    ||||||| |||| ||| ||| ||||| ||||||| |||  ||||||||||| ||||||||| |||||||||    
T  41086715 cacatccaaaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaag 41086785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 25504706 - 25504754
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacg 59  Q
    |||||||||||||||||||| |  |||||| |||||||||||||||||||    
T  25504706 acatcaccacctaaaacagagtctttcacg-aaacgaccactgaaaaacg 25504754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 41086572 - 41086648
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactc 88  Q
    ||||||||||||||||||   || ||| || ||||||||  ||||||||||| ||  ||||||||||||||||||||    
T  41086572 tcaccacctaaaacagaccccttaacgaaagcgaccactctaaaaacgatatccaataccacccatcgtcactactc 41086648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 226
Target Start/End: Complemental strand, 16577561 - 16577344
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaac-gatatacataaccacccatcgtcactactcaccccgaaagaagaccgctc 108  Q
    |||||| |||||||||||||||  |||||| ||||||||||| |||||  ||||| ||||||||  ||||||| |||||||| || |||||| ||| |||    
T  16577561 acatcatcacctaaaacagactctttcacgaaaacgaccactcaaaaaatgatatccataaccattcatcgtccctactcactccaaaagaacacccctc 16577462  T
Q  109 taaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatac 208  Q
    |||| |||| | ||  ||  ||||||||||||||| ||||||||||||| ||| ||||| ||| ||||||| |||  |||||||||||||||||| ||      
T  16577461 taaaagaaactttcagtcaccatcaccaaagttgagccacatccgaaaagctcctattccaaagatcattcagcttccaccacctctcaacctccaatct 16577362  T
Q  209 accgaaagaacacaaaaa 226  Q
    ||||||||||| ||||||    
T  16577361 accgaaagaacgcaaaaa 16577344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 41126271 - 41126462
Alignment:
Q  12 atcaccacctaaaacagacttattcacgtaaacga-ccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctcta 110  Q
    |||||||||||||||||||  ||||||| |||| | |||||| |||||||||| ||| ||||||||||||||||||||||||             |||||    
T  41126271 atcaccacctaaaacagacgcattcacgaaaacaaaccactgtaaaacgatatccatcaccacccatcgtcactactcaccc-------------ctcta 41126357  T
Q  111 aatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacac 210  Q
    ||||||| ||||  ||||||||||||||||||| ||||||| ||||| ||| ||| | ||| ||| ||| |||  || ||||||||||||||| || |||    
T  41126358 aatgaaactctcagtcctcatcaccaaagttgatccacatctgaaaagctcctatccaaaagatcgttcagcttccagcacctctcaacctccaatccac 41126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 38548856 - 38548934
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 89  Q
    ||||||||||||||||||||||  |||||| |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  38548856 acatcaccacctaaaacagactctttcacg-aaacgatcactgaaaaacgatattcataaccacccatcgtcactactca 38548934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 16149073 - 16148987
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaaga 99  Q
    ||||||||||||||||||   |||| ||||||||| ||||||||||||||| || || ||||||||||||||||||||||| |||||    
T  16149073 tcaccacctaaaacagacaccttcatgtaaacgactactgaaaaacgatatccaaaagcacccatcgtcactactcacccccaaaga 16148987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 38544535 - 38544613
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 89  Q
    ||||||||||||||||||||||  |||||| ||  || ||||| |||||||||| ||||||||| |||||||||||||||    
T  38544535 acatcaccacctaaaacagactctttcacggaat-gatcactggaaaacgatatccataaccactcatcgtcactactca 38544613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 16147735 - 16147649
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||| ||| ||||||||||||| |||||||  |||| |||||||  || |||||||||||| |||||||||  ||||||||||    
T  16147735 caccaaagctgagccacatccgaaaagctcatatctgaaagatcattcaactttcaccacctctccacctccgatctaccgaaagaa 16147649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 93
Target Start/End: Complemental strand, 32882668 - 32882584
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaa-acgatatacataaccacccatcgtcactactcacccc 93  Q
    |||||||| |||||||| ||||  |||||| |||||| ||||| ||| ||||||| ||  |||||||||||||||||||||||||    
T  32882668 acatcaccgcctaaaactgactccttcacgaaaacgagcactgtaaacacgatatccaacaccacccatcgtcactactcacccc 32882584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 6583120 - 6583206
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||| ||| || |||||||||| ||| |||  |||| |||| || |||  ||||||||||| ||||||||| |||||||||||    
T  6583120 caccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaa 6583206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 17033871 - 17033810
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 72  Q
    |||| ||||||||||||| |||  |||||| ||||||||||| ||||||| ||||||||||||    
T  17033871 acattaccacctaaaacatactctttcacg-aaacgaccacttaaaaacggtatacataacca 17033810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 31290923 - 31291009
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||| ||| ||||||||||||| ||| ||| ||||| ||||  |  ||  ||||||||||| ||||||||| |||||||||||    
T  31290923 caccaaagctgagccacatccgaaaagctcctatccgaaagatcaagcaacttccaccacctctcgacctccgatccaccgaaagaa 31291009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 10785252 - 10785330
Alignment:
Q  21 taaaacagacttattcacgtaaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||||  |||||| |||||||  |||||||| |||||| ||  ||||||||||||||||||||| |||| |||||    
T  10785252 taaaacagactccttcacgaaaacgacatctgaaaaaacgatatcca--accacccatcgtcactactcatcccgcaagaa 10785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 24659174 - 24659146
Alignment:
Q  65 cataaccacccatcgtcactactcacccc 93  Q
    |||||||||||||||||||||||||||||    
T  24659174 cataaccacccatcgtcactactcacccc 24659146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 31290799 - 31290880
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccc 92  Q
    ||||||||||||||| ||||||  ||| || |||||||||||| ||||| ||||  |  ||||| |||||||||||||||||||    
T  31290799 acatcaccacctaaatcagactccttcgcgaaaacgaccactgtaaaaatgatagcc--aaccatccatcgtcactactcaccc 31290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 49820387 - 49820311
Alignment:
Q  41 aaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 117  Q
    |||||| |||||||||||||||| ||||||||||| ||| ||| || || ||| ||| |  ||| ||||||||||||    
T  49820387 aaacgagcactgaaaaacgatatccataaccacccgtcgccaccacacatcccaaaatatcacccctctaaatgaaa 49820311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 17853851 - 17854073
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctct 109  Q
    ||||||||  ||||||||||||  || ||| |||||| |||||||||||||||| ||||||||||||||  ||||||||||||| |||| ||||  ||||    
T  17853851 acatcaccttctaaaacagactcctttacg-aaacgatcactgaaaaacgatatccataaccacccatcaccactactcaccccaaaagtagacacctct 17853949  T
Q  110 aaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgataca 209  Q
    ||||||||  | | ||||||||||||| || ||| |||||||||||||  |||||||| ||| |||||||  ||  |||||||||||||| || | | ||    
T  17853950 aaatgaaacac-caatcctcatcaccatagctgagccacatccgaaaa-gtcatattctaaagatcattcaacttccaccacctctcaacttcaggtcca 17854047  T
Q  210 ccgaaagaacacaaaaataaccccaa 235  Q
    |||||||||||  ||||||| |||||    
T  17854048 ccgaaagaacattaaaataagcccaa 17854073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 26045746 - 26045901
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccga--aagaagaccgctct 109  Q
    |||||||||||||||||||| |||| | ||| |||||| | |||||||| || ||  ||| ||||||||||||||||||||| |  || || ||| |||     
T  26045746 tcaccacctaaaacagacttcttcatgaaaatgaccacggtaaaaacgaaatccaacacctcccatcgtcactactcaccccaaagaaaaacacccctca 26045845  T
Q  110 aaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatat 165  Q
    |||| ||| |||| ||||| | ||||||||||||  ||| |||||||| |||||||    
T  26045846 aaattaaactctcaatcctaaacaccaaagttgagtcacctccgaaaagctcatat 26045901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 33258665 - 33258750
Alignment:
Q  16 ccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    ||||||||||||||  | |||||| || ||||||||| ||||||||||| ||  |||| |||||| ||||||||||||| ||||||    
T  33258665 ccacctaaaacagatctcttcacgaaagcgaccactgtaaaaacgatatccaataccatccatcgccactactcacccctaaagaa 33258750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 39183985 - 39184044
Alignment:
Q  12 atcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataacca 72  Q
    ||||||||||||||||||||   ||||| ||||||||||||||||||| ||| ||||||||    
T  39183985 atcaccacctaaaacagactctatcacg-aaacgaccactgaaaaacggtatccataacca 39184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 8731201 - 8731153
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacg 59  Q
    |||||||||||||||||||| |  |||||| |||||||||||||||||||    
T  8731201 acatcaccacctaaaacagagtctttcacg-aaacgaccactgaaaaacg 8731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 14302226 - 14302314
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    ||||||||||||||||| |  ||| || ||||||||| || ||||||||||| ||  ||||||  ||||||||||||| ||| ||||||    
T  14302226 tcaccacctaaaacagattccttcgcgaaaacgaccaatgtaaaaacgatatccaacaccacctgtcgtcactactcatccccaaagaa 14302314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 24072094 - 24072142
Alignment:
Q  41 aaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 89  Q
    ||||||||||| |||||||||||  || | |||||||||||||||||||    
T  24072094 aaacgaccactaaaaaacgatatctatgatcacccatcgtcactactca 24072142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 24072226 - 24072274
Alignment:
Q  187 accacctctcaacctccgatacaccgaaagaacacaaaaataaccccaa 235  Q
    ||||||| |||||||||| | |||||||||||||| |||| ||||||||    
T  24072226 accacctttcaacctccggtccaccgaaagaacaccaaaaaaaccccaa 24072274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 39024259 - 39024306
Alignment:
Q  44 cgaccactgaaaaacgatatacataaccacccatcgtcactactcaccc 92  Q
    |||||| ||||||||||||| ||||| ||| ||||||||||||||||||    
T  39024259 cgaccattgaaaaacgatatccataa-cactcatcgtcactactcaccc 39024306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 226
Target Start/End: Original strand, 32935126 - 32935337
Alignment:
Q  14 caccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaat 113  Q
    |||||||||||| |||||  || ||| ||||| || || |||||||||||||||||||||||||| |||||||| ||||| ||| || | | ||||||||    
T  32935126 caccacctaaaatagactccttaacgaaaacgccccctcaaaaacgatatacataaccacccatcatcactactgacccc-aaaaaacatccctctaaat 32935224  T
Q  114 gaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccga 213  Q
    |||| || |  | ||||||||||||| |||   ||||||||||| ||||| ||||||| ||||| | |||  ||||||||| ||||||  ||  ||||||    
T  32935225 gaaactcacagtgctcatcaccaaagctgagttacatccgaaaaactcatgttcgaaagatcatgcagcttccaccacctcccaacctttgaaccaccga 32935324  T
Q  214 aagaacacaaaaa 226  Q
    |||||||| ||||    
T  32935325 aagaacactaaaa 32935337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 218
Target Start/End: Original strand, 20701710 - 20701793
Alignment:
Q  135 caaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    ||||||||| |||||| |||||| ||| ||| ||||| ||||||| |||  ||| ||||||| ||||||||| |||||||||||    
T  20701710 caaagttgagccacattcgaaaagctcctatccgaaagatcattcagcttccactacctctcgacctccgatccaccgaaagaa 20701793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 20701583 - 20701664
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 93  Q
    |||||||||| |||||||  ||||||| || | ||||||| ||||||||||| ||  || ||||||||||||||||||||||    
T  20701583 tcaccacctataacagacccattcacgaaagcaaccactgtaaaaacgatatccaatactacccatcgtcactactcacccc 20701664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 21266369 - 21266263
Alignment:
Q  44 cgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttga 143  Q
    ||||||||||||||||| || || ||| ||| |||||||||||||||||| || ||| |||| | |||| ||||  ||| ||||||| |||||||  |||    
T  21266369 cgaccactgaaaaacgacatccagaacaacc-atcgtcactactcaccccaaaggaacaccgttgtaaaagaaa-actcaatcctcaacaccaaaactga 21266272  T
Q  144 accacatcc 152  Q
     ||||||||    
T  21266271 gccacatcc 21266263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 33968443 - 33968518
Alignment:
Q  41 aaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaa 117  Q
    ||||||||||||||||| | ||| ||||||||  |||| |||||||||| ||| ||| || ||| ||||||||||||    
T  33968443 aaacgaccactgaaaaatggtatccataacca-gcatcatcactactcatcccaaaataacacccctctaaatgaaa 33968518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 12296426 - 12296322
Alignment:
Q  44 cgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaaattctcgatcctcatcaccaaagttga 143  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||| || ||| ||||||||||||  |||  ||||||||||| |||||||    
T  12296426 cgaccactgaaaaacgatatccataaccacccatcgccactactcatcccaaaataacacccctctaaatgaaacactccgtcctcatcacctaagttga 12296327  T
Q  144 accac 148  Q
     ||||    
T  12296326 gccac 12296322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 19673392 - 19673188
Alignment:
Q  18 acctaaaacagacttattcacgtaaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaa 116  Q
    |||| |||||||| | |||||| ||| |||||||| |||| | |||| ||  |||| || ||||||||||||||||| |||||| ||  ||| |||| ||    
T  19673392 acctcaaacagacgtcttcacgaaaatgaccactgtaaaagcaatatccaacaccatccgtcgtcactactcacccccaaagaacactcctcaaaattaa 19673293  T
Q  117 attctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaag 216  Q
    | ||||  |||||| |||||||||| | |||||||||||||  |||||| | ||||||||||  |||  ||||| || || |||  |||| |||||||||    
T  19673292 actctcagtcctcaacaccaaagtttagccacatccgaaaagttcatatccaaaatatcatttagcttccaccatctatcgaccgtcgatccaccgaaag 19673193  T
Q  217 aacac 221  Q
    |||||    
T  19673192 aacac 19673188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 19815009 - 19815213
Alignment:
Q  18 acctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctctaaatgaa 116  Q
    |||| |||||||| | |||||| ||| |||||| | ||||| ||||| ||  |||| || | ||||||||||||||| |||||| ||  ||| | || ||    
T  19815009 acctcaaacagacgtcttcacgaaaatgaccacggtaaaaatgatatccaataccatccgttgtcactactcacccccaaagaacacttctcaagattaa 19815108  T
Q  117 attctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaag 216  Q
    | ||||  |||||| |||||||||| | ||||||| |||||  || ||| ||||| ||||||  |||  ||||| ||||| ||||||| | |||||||||    
T  19815109 actctcagtcctcaacaccaaagtttagccacatcggaaaagttcctatccgaaagatcatttagcttccaccatctctcgacctccggtccaccgaaag 19815208  T
Q  217 aacac 221  Q
    |||||    
T  19815209 aacac 19815213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 22810943 - 22811029
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    ||||| |||||||||||||  |||||| || ||||||||| ||||||||||| |   |||| |||||||||||||||||||| ||||||    
T  22810943 tcacctcctaaaacagactgcttcacgaaaccgaccactgtaaaaacgatatcct--accatccatcgtcactactcacccccaaagaa 22811029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 48098632 - 48098546
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||||||||  |||  ||||  |||||||||||| ||||||||||| ||| || |||| ||||||||||||||||| ||||||    
T  48098632 tcaccacctaaaacactctt--tcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcgtcactactcacccccaaagaa 48098546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 49747826 - 49747739
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||||||||||||  |||||| ||||||||| || |||||||| || ||  ||| ||||| ||||||||||||||| ||||||    
T  49747826 tcaccacctaaaacagactctttcacgaaaacgaccattgtaaaaacga-atccaacaccgcccattgtcactactcacccctaaagaa 49747739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 20632265 - 20632339
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcacta 85  Q
    |||||||| |||||||||||||  |||||  |||| ||||||||| ||||||| |||||||||||| ||| |||||    
T  20632265 acatcaccccctaaaacagactctttcaca-aaacaaccactgaagaacgatacacataaccacccgtcgccacta 20632339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 38637016 - 38637095
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 93  Q
    ||||||||||||||| |||  |||||| |||| ||| ||| ||||| ||||| ||  |||||||||||||||||||||||||    
T  38637016 tcaccacctaaaacaaactccttcacgaaaacaaccgctgtaaaaatgatatcca--accacccatcgtcactactcacccc 38637095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 49528249 - 49528163
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||| ||||||||||||| ||| ||  ||| ||||| |||||||  ||  ||||||||| | ||||||||| |||||||||||    
T  49528249 caccaaagctgaaccacatccgcaaagcttctatccgaaagatcattcatcttccaccacctcccgacctccgatccaccgaaagaa 49528163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 46487522 - 46487477
Alignment:
Q  44 cgaccactgaaaaacgatatacataaccacccatcgtcactactca 89  Q
    |||||||||||||||||||| |||||||||  |||| |||||||||    
T  46487522 cgaccactgaaaaacgatattcataaccacatatcgccactactca 46487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 814 - 892
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactca 89  Q
    ||||||||||||||||||||||  |||||| ||  || ||||| |||||||||| ||||||||| |||||||||||||||    
T  814 acatcaccacctaaaacagactctttcacggaat-gatcactggaaaacgatatccataaccactcatcgtcactactca 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 39021122 - 39021267
Alignment:
Q  75 catcgtcactactcaccccgaaagaagaccgc-tctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcg-aaat 172  Q
    |||||||||||||||| || ||||||   ||| || |||||||| ||||  |||||| |||||||| | | ||||||||||||| ||||||| || |||     
T  39021122 catcgtcactactcacacccaaagaaacacgcgtcaaaatgaaactctcagtcctcaacaccaaagctaagccacatccgaaaaactcatatccgaaaag 39021221  T
Q  173 atcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||| || |||| ||||| ||||| ||||||||| |||| ||||||    
T  39021222 atcaatcagctaccaccatctctcgacctccgatccaccaaaagaa 39021267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 244
Target Start/End: Original strand, 823246 - 823450
Alignment:
Q  41 aaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaag-aagaccgctctaaatgaaattctcgatcctcatcaccaaag 139  Q
    |||| |||||||||||||||||| ||||||||||| ||| | ||||||||||  |||| || ||| |||||| | |||  |    |||| || |||| |     
T  823246 aaacaaccactgaaaaacgatatccataaccacccttcgcctctactcaccctaaaagaaacacctctctaattcaaacaccatgtccttattaccataa 823345  T
Q  140 ttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaacacaaaaataaccccaacacc 239  Q
    |||| ||||||| |||||  || ||||  ||| ||||||| |||  | ||||||||||||||| | |  ||||||||||||| ||||||| ||||| ||     
T  823346 ttgagccacatctgaaaatgtcctattgaaaagatcattcagcttccgccacctctcaacctctggtctaccgaaagaacaccaaaataagcccaaaaca 823445  T
Q  240 aaact 244  Q
    |||||    
T  823446 aaact 823450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 14879708 - 14879648
Alignment:
Q  41 aaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    ||||||||||||||||| |||||| ||  ||||| ||||||||||| ||||||||||||||    
T  14879708 aaacgaccactgaaaaaacgatatccaacaccacacatcgtcactattcaccccgaaagaa 14879648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 32010063 - 32010016
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaa 57  Q
    ||||||||||||||||||||||  |||||| |||||||| ||||||||    
T  32010063 acatcaccacctaaaacagactccttcacgaaaacgacctctgaaaaa 32010016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 25647863 - 25647777
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||  ||| |||| |||||||| ||||||  ||||| |||||||  || |||||||||||| ||||||||| |||| ||||||    
T  25647863 caccaaaactgagccacgtccgaaaagctcataaccgaaagatcattcaactttcaccacctctcgacctccgatccaccaaaagaa 25647777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 37123683 - 37123601
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacc 91  Q
    |||||||||  ||||| |||||| |||||| |||||||||||| ||||||||||| ||  ||||||  | |||||||||||||    
T  37123683 acatcaccatataaaatagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccacctgttgtcactactcacc 37123601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 14194229 - 14194152
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcacccc 93  Q
    |||||||||||||||||||   ||||| || || |||||||| |||||||| ||  |||| ||||||||||||||||||||    
T  14194229 tcaccacctaaaacagactccatcacgaaatcg-ccactgaataacgatatcca--accatccatcgtcactactcacccc 14194152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 23328188 - 23328233
Alignment:
Q  68 aaccacccatcgtcactactcaccccgaaagaagaccgctctaaat 113  Q
    |||||||||||||||||||||||||| |||||| ||| ||| ||||    
T  23328188 aaccacccatcgtcactactcacccccaaagaacaccactcaaaat 23328233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 25594328 - 25594406
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaa-cgatatacataaccacccatcgtcactactca 89  Q
    ||||||| |||||||||| |||  |||||  ||||||||||||||||| |||||| || |||||||||||| |||||||||    
T  25594328 acatcactacctaaaacatactccttcaca-aaacgaccactgaaaaaacgatatcca-aaccacccatcgccactactca 25594406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 27399246 - 27399140
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataa-ccacccatcgtcactactcaccccgaaagaagaccgctc 108  Q
    |||||| |||||||||||| ||  |||||| || ||||||||||||| ||||||  |||| |||||||| | ||||||||| ||| |||||| |||  ||    
T  27399246 acatcatcacctaaaacaggctccttcacgcaa-cgaccactgaaaa-cgatatctataaaccacccattgccactactcagcccaaaagaacacccgtc 27399149  T
Q  109 taaatgaaa 117  Q
    |||||||||    
T  27399148 taaatgaaa 27399140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 28937498 - 28937574
Alignment:
Q  16 ccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacc 91  Q
    |||||||||||||||   |||||| ||  |||||||| ||||||||||| ||  ||||||||||| |||||||||||    
T  28937498 ccacctaaaacagaccccttcacgaaagtgaccactgtaaaaacgatatccaataccacccatcgccactactcacc 28937574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 33143733 - 33143813
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactgaa-aaacgatatacataaccacccatcgtcactactcaccc 92  Q
    ||||||||||||||| |||  |||||| |||| ||||||||| ||||||||| ||   ||| || ||||||||||||||||    
T  33143733 tcaccacctaaaacaaactccttcacgaaaaccaccactgaacaaacgatatccaaccccatccgtcgtcactactcaccc 33143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 17720503 - 17720626
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaagaccgctct 109  Q
    ||||||| |||||||||| |||  |||||  ||| |||| || ||||| |||||||||||||||  |||||||||||||||||| |||  | ||| ||||    
T  17720503 acatcactacctaaaacaaactccttcaccaaaa-gacctctaaaaaaagatatacataaccacatatcgtcactactcaccccaaaaataaacccctct 17720601  T
Q  110 aaatgaaattctcgatcctcatcac 134  Q
    ||||||||  |||  ||||||||||    
T  17720602 aaatgaaacactccgtcctcatcac 17720626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 10248349 - 10248430
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcacccc 93  Q
    ||||||||||||||| |||  |||||| |||||||||||| |||||||| || |   | |||||||||||||||||||||||    
T  10248349 tcaccacctaaaacaaactccttcacgaaaacgaccactgtaaaaacgacatcccacaacacccatcgtcactactcacccc 10248430  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 17656906 - 17656992
Alignment:
Q  132 caccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccgatacaccgaaagaa 218  Q
    |||||||||||| |||| || ||||| ||| |||  |||| ||||||| |||  |||||||| || ||||||||| |||||||||||    
T  17656906 caccaaagttgagccacctctgaaaagctcctatatgaaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaa 17656992  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 12197857 - 12197945
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactgaaaa-acgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||| |||||||   |||| | | ||||||||| |||| ||||||| ||  ||||||| ||||||||||||||||| ||||||    
T  12197857 tcaccacctacaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaaagaa 12197945  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 12442285 - 12442373
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactgaaaa-acgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||| |||||||   |||| | | ||||||||| |||| ||||||| ||  ||||||| ||||||||||||||||| ||||||    
T  12442285 tcaccacctacaacagacgccttcatgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactcacccccaaagaa 12442373  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 15906978 - 15906839
Alignment:
Q  3 gagatggacatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaacgatatacataaccacccatcgtcactactcaccccgaaagaaga 102  Q
    ||||| |||||||||||| ||||||||    |||||| ||||||||||||||||||  ||| |||||||||   | | ||||||||| ||| ||| || |    
T  15906978 gagatagacatcaccaccaaaaacagatcccttcacg-aaacgaccactgaaaaacagtatccataaccacatgttgccactactcatcccaaaataaca 15906880  T
Q  103 ccgctctaaatgaaattctcgatcctcatcaccaaagttga 143  Q
    || |||||||| |||  | |  ||||||||||| |||||||    
T  15906879 cctctctaaataaaacacactgtcctcatcacctaagttga 15906839  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 218
Target Start/End: Complemental strand, 58430 - 58218
Alignment:
Q  10 acatcaccacctaaaacagacttattcacgtaaacgaccactgaaaaac-gatatacataaccacccatcgtcactactcaccccgaaag---aagaccg 105  Q
    ||||||||||| ||||||||||  |||||| ||||||||| || ||||| ||||| ||  || |||| |||||||||||||| || ||||   || ||      
T  58430 acatcaccaccaaaaacagactccttcacgaaaacgaccattgtaaaactgatatccaacactacccgtcgtcactactcacacccaaagaacaacactc 58331  T
Q  106 ctctaaatgaaattctcgatcctcatcaccaaagttgaaccacatccgaaaacctcatattcgaaatatcattccgctatcaccacctctcaacctccga 205  Q
    ||| |||| ||| ||||  |||  | |||||||| ||| |||||| |||||| ||| ||| ||||| || |||| |||  || || ||||| ||||||||    
T  58330 ctcaaaattaaactctcagtcccgaacaccaaagctgagccacattcgaaaagctcttatccgaaagataattcagcttccatcatctctcgacctccga 58231  T
Q  206 tacaccgaaagaa 218  Q
    | |||||||||||    
T  58230 tccaccgaaagaa 58218  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 37005 - 36920
Alignment:
Q  13 tcaccacctaaaacagacttattcacgtaaacgaccactg-aaaaacgatatacataaccacccatcgtcactactcaccccgaaagaa 100  Q
    |||||||||||||||||||  |||||| |||| ||||||| |||||||| || ||  |||| ||| |||||||||||||||| ||||||    
T  37005 tcaccacctaaaacagactccttcacg-aaaccaccactgtaaaaacgacatcca--accatccaccgtcactactcacccccaaagaa 36920  T

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