View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6863A_low_210 (Length: 245)
Name: NF6863A_low_210
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6863A_low_210 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6917702 - 6917921
Alignment:
| Q |
1 |
caagtgataagtaatttttgcactatttgatgactgttcttggcacacatgcatgctgtttccacgcctgtgttatggttggttgagaggctatgatgtt |
100 |
Q |
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| T |
6917702 |
caagtgataagtaatttttgcactatttgatgactgttcttggcacatatgcatgatgtttccacgcctgtgttatggttggttgagaggctatgatgtt |
6917801 |
T |
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| Q |
101 |
aacataatttgtccactggtgttgaaaagtcaaatggcttatgtcatgagaacaacaaggttacatggtcgtttccaagatcaatggtaaaggttaaaaa |
200 |
Q |
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| T |
6917802 |
aacataatttgtccactggtgttgaaaagtcaaatggcttatgtcatgagaacaacaaggttacatggtcatttccaagatcaacggtaaaggttaaaaa |
6917901 |
T |
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| Q |
201 |
cttgaagtaatggtaatttg |
220 |
Q |
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|||||||||||||||||||| |
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| T |
6917902 |
cttgaagtaatggtaatttg |
6917921 |
T |
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