View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6863A_low_293 (Length: 227)

Name: NF6863A_low_293
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6863A_low_293
NF6863A_low_293
[»] chr3 (21 HSPs)
chr3 (1-209)||(33399490-33399698)
chr3 (4-191)||(46992162-46992349)
chr3 (4-191)||(7841931-7842118)
chr3 (4-191)||(14399513-14399700)
chr3 (4-191)||(36816432-36816619)
chr3 (4-191)||(48249783-48249970)
chr3 (6-191)||(13746637-13746822)
chr3 (6-191)||(30946558-30946743)
chr3 (4-191)||(77936-78123)
chr3 (4-191)||(21955154-21955341)
chr3 (4-191)||(29930326-29930513)
chr3 (4-191)||(29979480-29979667)
chr3 (6-191)||(3949703-3949888)
chr3 (6-191)||(6741847-6742032)
chr3 (6-191)||(8159899-8160084)
chr3 (6-191)||(9428749-9428934)
chr3 (4-191)||(7838554-7838741)
chr3 (4-165)||(6504897-6505058)
chr3 (6-191)||(16445580-16445765)
chr3 (56-168)||(25059880-25059992)
chr3 (6-149)||(50954233-50954376)
[»] chr1 (24 HSPs)
chr1 (1-192)||(26466185-26466376)
chr1 (3-186)||(32106563-32106744)
chr1 (20-192)||(25231276-25231448)
chr1 (1-157)||(16246702-16246857)
chr1 (4-191)||(21943280-21943467)
chr1 (4-191)||(50116679-50116866)
chr1 (4-191)||(7980128-7980315)
chr1 (4-191)||(37015872-37016059)
chr1 (4-191)||(38691855-38692042)
chr1 (4-191)||(46974122-46974309)
chr1 (4-191)||(51663216-51663403)
chr1 (95-190)||(5078984-5079079)
chr1 (6-191)||(20350416-20350601)
chr1 (6-191)||(29355604-29355789)
chr1 (6-191)||(41454797-41454982)
chr1 (6-191)||(3947377-3947562)
chr1 (6-191)||(3984073-3984258)
chr1 (6-191)||(38775031-38775216)
chr1 (6-191)||(44466542-44466727)
chr1 (6-191)||(44620019-44620204)
chr1 (57-191)||(13174792-13174926)
chr1 (6-191)||(13630376-13630561)
chr1 (111-191)||(39914002-39914082)
chr1 (95-191)||(12649495-12649589)
[»] chr5 (18 HSPs)
chr5 (2-192)||(20285965-20286155)
chr5 (20-190)||(23028477-23028654)
chr5 (11-163)||(13157978-13158130)
chr5 (20-187)||(20286483-20286650)
chr5 (4-191)||(18537252-18537439)
chr5 (95-191)||(7020796-7020892)
chr5 (4-191)||(1035466-1035653)
chr5 (4-191)||(25896017-25896204)
chr5 (95-191)||(27866761-27866857)
chr5 (95-191)||(34078829-34078925)
chr5 (4-191)||(7799922-7800109)
chr5 (32-191)||(13567018-13567177)
chr5 (57-191)||(4202855-4202989)
chr5 (6-160)||(38859137-38859291)
chr5 (6-191)||(11032368-11032553)
chr5 (6-191)||(37819793-37819978)
chr5 (111-191)||(28885324-28885404)
chr5 (119-191)||(1036424-1036496)
[»] chr4 (15 HSPs)
chr4 (23-192)||(6182653-6182822)
chr4 (4-191)||(18580244-18580431)
chr4 (4-191)||(4976713-4976900)
chr4 (6-191)||(9890982-9891167)
chr4 (103-191)||(19072573-19072661)
chr4 (4-191)||(4978870-4979057)
chr4 (4-191)||(21471752-21471939)
chr4 (57-191)||(11502517-11502651)
chr4 (94-191)||(4769178-4769275)
chr4 (6-191)||(49565380-49565565)
chr4 (95-191)||(3404839-3404935)
chr4 (95-191)||(41024248-41024344)
chr4 (4-191)||(51643414-51643603)
chr4 (4-79)||(17140547-17140622)
chr4 (123-191)||(38463753-38463821)
[»] chr2 (21 HSPs)
chr2 (3-191)||(17997088-17997276)
chr2 (4-188)||(12907411-12907595)
chr2 (4-191)||(41007896-41008083)
chr2 (27-191)||(436292-436456)
chr2 (4-191)||(11692730-11692917)
chr2 (4-191)||(43949198-43949385)
chr2 (6-191)||(7263992-7264177)
chr2 (95-191)||(3802482-3802578)
chr2 (95-191)||(27275276-27275372)
chr2 (4-191)||(28354818-28355005)
chr2 (6-191)||(212357-212542)
chr2 (6-191)||(10623370-10623555)
chr2 (95-191)||(5348216-5348312)
chr2 (95-191)||(41561061-41561157)
chr2 (95-191)||(45476407-45476503)
chr2 (4-191)||(24605005-24605192)
chr2 (4-191)||(24750616-24750803)
chr2 (95-191)||(34920698-34920794)
chr2 (6-191)||(38946723-38946908)
chr2 (6-191)||(39794930-39795115)
chr2 (4-77)||(34920802-34920875)
[»] chr7 (15 HSPs)
chr7 (4-191)||(8400544-8400731)
chr7 (4-191)||(43827522-43827709)
chr7 (4-191)||(47061841-47062028)
chr7 (3-190)||(21799969-21800156)
chr7 (6-191)||(617665-617850)
chr7 (6-191)||(18106348-18106533)
chr7 (6-191)||(30787499-30787684)
chr7 (6-191)||(43623051-43623236)
chr7 (6-191)||(45764339-45764524)
chr7 (56-191)||(20908433-20908568)
chr7 (95-191)||(15060662-15060758)
chr7 (6-165)||(42500367-42500526)
chr7 (105-191)||(3761964-3762050)
chr7 (120-191)||(16794529-16794600)
chr7 (111-191)||(8194196-8194276)
[»] chr8 (15 HSPs)
chr8 (4-191)||(7168858-7169045)
chr8 (4-191)||(35965661-35965848)
chr8 (57-191)||(22580914-22581048)
chr8 (4-191)||(39751944-39752131)
chr8 (4-191)||(45455334-45455521)
chr8 (56-191)||(14401688-14401825)
chr8 (4-191)||(43370725-43370912)
chr8 (4-191)||(43689087-43689274)
chr8 (6-191)||(7341039-7341224)
chr8 (6-191)||(8422772-8422957)
chr8 (6-191)||(30304526-30304711)
chr8 (6-191)||(32377824-32378009)
chr8 (6-191)||(32431781-32431966)
chr8 (95-191)||(1115821-1115917)
chr8 (27-149)||(2145948-2146070)
[»] scaffold0219 (1 HSPs)
scaffold0219 (4-191)||(17027-17214)
[»] chr6 (12 HSPs)
chr6 (4-191)||(18606954-18607141)
chr6 (6-191)||(28250856-28251041)
chr6 (57-166)||(31147333-31147442)
chr6 (4-166)||(7362137-7362299)
chr6 (8-166)||(24220128-24220286)
chr6 (6-191)||(1611667-1611852)
chr6 (27-191)||(29287864-29288028)
chr6 (95-191)||(21358263-21358359)
chr6 (95-191)||(23962245-23962341)
chr6 (56-171)||(34111598-34111713)
chr6 (4-79)||(35243561-35243636)
chr6 (6-79)||(13387722-13387795)
[»] scaffold0341 (1 HSPs)
scaffold0341 (95-191)||(16273-16369)
[»] scaffold0494 (1 HSPs)
scaffold0494 (6-191)||(1841-2026)
[»] scaffold0101 (1 HSPs)
scaffold0101 (6-191)||(33769-33954)
[»] scaffold0116 (1 HSPs)
scaffold0116 (4-191)||(12220-12407)
[»] scaffold0340 (1 HSPs)
scaffold0340 (4-166)||(111-273)


Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 33399490 - 33399698
Alignment:
Q  1 gtatgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttaga 100  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33399490 gtatgttcatggttcgtggatatcttagtaggcaagcaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttaga 33399589  T
Q  101 aagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttgtacaattag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||| |    
T  33399590 aagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtacgtgacttgaccaagagtttggtgcttccaaaaaatattttgttaaatttg 33399689  T
Q  201 aggaccaaa 209  Q
    | |||||||    
T  33399690 aagaccaaa 33399698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 46992349 - 46992162
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  46992349 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagg 46992250  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| |||| |||||    
T  46992249 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaattttttg 46992162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 7842118 - 7841931
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || |   |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  7842118 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgaggattgaacattcttaatggagttcacaaccatgcgatgaagccggctttagaagg 7842019  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| |||||  |||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  7842018 acacattcttgcctgtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 7841931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 14399513 - 14399700
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||| ||||||||||||||||| |  ||| | |    ||||||| |    
T  14399513 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattctaaatggagttcacaaccatgccatggagccggctttagaagg 14399612  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||||||||||| |||||| ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  14399613 acacattcttgccggtagattaaagaaggatgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 14399700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 36816619 - 36816432
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |    
T  36816619 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaagg 36816520  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  36816519 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 36816432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 48249970 - 48249783
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    |||| || |    
T  48249970 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctttataagg 48249871  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | |||||||  |||| ||||||||||||||||   | ||||||||| ||||||||||    
T  48249870 acacattcttgccggtagattaaaggaggacgacaagaagactgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 48249783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 13746822 - 13746637
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  13746822 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 13746723  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  13746722 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 13746637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 30946743 - 30946558
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  30946743 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 30946644  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||||| ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  30946643 acattcttgccggtagattaaaggaggatgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 30946558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 78123 - 77936
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||   |||| | |    ||||||| |    
T  78123 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatttgatggagccggctttagaagg 78024  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||  |||| |||||||||||||| || | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  78023 acacattattgccggtagattaaaggaagacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 77936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 21955341 - 21955154
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| | ||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    | ||||| |    
T  21955341 tgttcatgattagtggatatcaaagtaagtaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctctagaagg 21955242  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||  |||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  21955241 acacattattgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 21955154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 29930326 - 29930513
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | ||||   |    ||||||| |    
T  29930326 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatgatgccggctttagaagg 29930425  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||  ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| | ||||||||    
T  29930426 acacattcttggcggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagacatattttg 29930513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 29979480 - 29979667
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | ||||   |    ||||||| |    
T  29979480 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatgatgccggctttagaagg 29979579  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||  ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| | ||||||||    
T  29979580 acacattcttggcggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagacatattttg 29979667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 3949703 - 3949888
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  3949703 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 3949802  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  3949803 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 3949888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 6741847 - 6742032
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  6741847 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 6741946  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  6741947 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 6742032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 8160084 - 8159899
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  8160084 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 8159985  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  8159984 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 8159899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 9428934 - 9428749
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  9428934 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 9428835  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  9428834 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 9428749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 7838554 - 7838741
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||| ||||||||||||||| | |||| | |    ||||||| |    
T  7838554 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttagtggagttcacaaccatgcgatggagccggctttagaagg 7838653  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||| | |||||| |||||||||| | ||||||| ||||| ||||||||||||||||     ||||||||| ||||||||||    
T  7838654 acacattctttccggtagactaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaatatgcttccaagaaatattttg 7838741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 6505058 - 6504897
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  6505058 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaatg 6504959  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaaga 165  Q
    |||||| ||||| |||||| |||||||||| |  |||||| |||||  ||||||||||||||    
T  6504958 acacattcttgccggtagactaaaggaggacgaaaagaagattgtacatgacttgaccaaga 6504897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 16445580 - 16445765
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  16445580 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 16445679  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||| | ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  16445680 acattctttccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 16445765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 25059992 - 25059880
Alignment:
Q  56 tattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgac 155  Q
    |||||||||||| |||||||||||  |||||| || |  ||||| | | ||||| |||||||  ||||||| | |||| | |||| || || ||||||||    
T  25059992 tattcttaatggtgttcacaaccataagatgttaccatatttagcagggcacattcttgcggaaagattaatgaaggacgacaaggagattatatgtgac 25059893  T
Q  156 ttgaccaagagtt 168  Q
    |||||||||||||    
T  25059892 ttgaccaagagtt 25059880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 50954233 - 50954376
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  50954233 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 50954332  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgta 149  Q
    |||| ||||| ||||||||||||||||| | ||||||| |||||    
T  50954333 acattcttgccggtagattaaaggaggacgacaagaagattgta 50954376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 26466376 - 26466185
Alignment:
Q  1 gtatgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttaga 100  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| | |    ||||||    
T  26466376 gtatgttcattgttcgtggatatcttagtaggcaaacaaatgattggagattaaacattcttaatggagttcacaaccatgagatggagccggctttaga 26466277  T
Q  101 aagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttgt 192  Q
    | |||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||| |  ||||||||||| |||||||||||    
T  26466276 atgacacatgcttgcgggtagattaaaggaggatgataagaagattgtacgtgacttgaccaagactaaggtgcttccaagaaatattttgt 26466185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 186
Target Start/End: Complemental strand, 32106744 - 32106563
Alignment:
Q  3 atgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaa 102  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| |||||| |||||||||||  |||||||||| || |||||| | | ||||||||||     
T  32106744 atgttcatggttcgtggatatcttagaaggtaaacaaatgattggagattgaatattcttaa--gagttcacaatcatgagatggagccaagtttagaag 32106647  T
Q  103 gacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaata 186  Q
    |||||||| |||| ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  32106646 gacacatgattgctggtagattaaaggagaatgacaaaaagcttgtatgtgacttgaccaagagtttggtgctttgaaaaaata 32106563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 25231276 - 25231448
Alignment:
Q  20 atatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggt 119  Q
    |||| |||||||| |||||||||| | |||||| |||||| | ||||||||||||||||  |||| | | | |||||| ||| ||||||||||||| |||    
T  25231276 atatattagtagggaaacaaatgactggagattgaatattttcaatggagttcacaaccgtgagacgaagccaagtttggaaggacacatgcttgcaggt 25231375  T
Q  120 agattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttgt 192  Q
    |||| || |||||||  ||||||| ||||| |||||||||||||  |||||||||||  || |||||||||||    
T  25231376 agatcaagggaggataccaagaagattgtacgtgacttgaccaaatgtttggtgcttttaacaaatattttgt 25231448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16246857 - 16246702
Alignment:
Q  1 gtatgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttaga 100  Q
    |||||||||||||| ||||||||||  |||||||||||||||| | |||||| || ||| |||||| |||||||||||| | |||| | |  | ||||||    
T  16246857 gtatgttcatggttagtgaatatctgtgtaggcaaacaaatgaatggagattgaa-attgttaatgaagttcacaaccatgcgatggagccgactttaga 16246759  T
Q  101 aagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgactt 157  Q
    | ||||||||||| | ||||||||||| ||||||| ||||||| ||||| |||||||    
T  16246758 aggacacatgcttaccggtagattaaaagaggatgacaagaagattgtacgtgactt 16246702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 21943467 - 21943280
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||| |||||| ||| |||||  |||||||||||||| || | | |||| || ||||| ||||||||||||||||| | |||| | |   |||||||| |    
T  21943467 tgtttatggttagtggatatcaaagtaggcaaacaaaggaatggggattgaacattctcaatggagttcacaaccatgggatggagccgggtttagaagg 21943368  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||| | ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  21943367 acacattcttaccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 21943280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 50116866 - 50116679
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||| ||| || | |||||| || |||||||||||||||||| |||| | |||| | |    ||||||| |    
T  50116866 tgttcatgattagtggatatcaaagtaagcaaataaaggaatggagattgaacattcttaatggagttcactaccatgcgatggagccggctttagaagg 50116767  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||  |||||||||||||||||| | ||||||||| ||||||||||    
T  50116766 acacattcttgccggtagattaaaggaggacgacaagaagattgttcgtgacttgaccaagagttagatgcttccaagaaatattttg 50116679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 7980315 - 7980128
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| |  ||| |      ||||||| |    
T  7980315 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcaatgcagtcggctttagaagg 7980216  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||||| ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  7980215 acacattcttgccggtagattaaaggaggatgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 7980128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 37015872 - 37016059
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  37015872 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagctggctttagaagg 37015971  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||  ||||||||||||||||   | ||||||||| ||||||||||    
T  37015972 acacattcttgccggtagattaaaggaggacgacaagaagattgtgcgtgacttgaccaagagcaagatgcttccaagaaatattttg 37016059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 38692042 - 38691855
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |  | ||||||| |    
T  38692042 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccgactttagaagg 38691943  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| | ||||| |||| |||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  38691942 acacgttcttgccggtaaattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 38691855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 46974122 - 46974309
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||| ||||||| | |||| | |  | ||||||| |    
T  46974122 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagtttacaaccatgcgatggagccgactttagaagg 46974221  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||| |||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  46974222 acacattcttgccggtacattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 46974309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 51663216 - 51663403
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || |||||||||  |||| ||||||||| || | | |||| || ||||||||||||| ||||||||| | |||| | |    ||||||| |    
T  51663216 tgttcatgattagtgaatatcaaagtaagcaaacaaaagaatggggattgaacattcttaatggagctcacaaccatgcgatgaagccggctttagaatg 51663315  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| | ||||||||||||||   | ||||||||| ||||||||||    
T  51663316 acacattcttgctggtagattaaaggaggaggacaagaagattgtacgcgacttgaccaagagcaagatgcttccaagaaatattttg 51663403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 5078984 - 5079079
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatatttt 190  Q
    ||||||| ||||||| ||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||||||   | ||||||||| |||||||||    
T  5078984 tttagaaggacacattcttgccggtagattaaaggaggacggcaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatatttt 5079079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 20350416 - 20350601
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | ||||||| |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  20350416 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattaaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 20350515  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  20350516 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 20350601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 29355789 - 29355604
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  29355789 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 29355690  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  29355689 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 29355604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 41454797 - 41454982
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  41454797 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 41454896  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  41454897 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 41454982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 3947562 - 3947377
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  3947562 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 3947463  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  3947462 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 3947377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 3984073 - 3984258
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  3984073 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 3984172  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  3984173 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 3984258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 38775216 - 38775031
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  38775216 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 38775117  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  38775116 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 38775031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 44466542 - 44466727
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  44466542 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 44466641  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  44466642 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 44466727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 44620204 - 44620019
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  44620204 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 44620105  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  44620104 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 44620019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 13174792 - 13174926
Alignment:
Q  57 attcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgact 156  Q
    ||||||||||||||||||||||| | |||| | |    ||||| | ||||||| || || ||||||||||||||||| | ||||||| ||||  ||||||    
T  13174792 attcttaatggagttcacaaccatgcgatggagccggctttaggaggacacattctcgctggtagattaaaggaggacgacaagaagattgttcgtgact 13174891  T
Q  157 tgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||||||   | ||||||||| ||||||||||    
T  13174892 tgaccaagagcaagatgcttccaataaatattttg 13174926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 13630376 - 13630561
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  13630376 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 13630475  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||| | ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  13630476 acattctttccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 13630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 39914002 - 39914082
Alignment:
Q  111 cttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| | ||||||| | |||||| ||||||| ||||| ||||||||||||||||||||||||  | |||||||||||||    
T  39914002 cttgcgagaagattaatgaaggatgacaagaagattgtacgtgacttgaccaagagtttggtgcaacaaaaaaatattttg 39914082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 12649589 - 12649495
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| |||| |||||  ||| | | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  12649589 tttagaaggacacattcttgccggtaaattaa--gagcacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 12649495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 192
Target Start/End: Original strand, 20285965 - 20286155
Alignment:
Q  2 tatgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaa 101  Q
    ||||||||||||  ||| |||||||||||||||||||||||| | || | | || ||||||||||||||||||||||| | |||| | |    |||||||    
T  20285965 tatgttcatggtaagtggatatcttagtaggcaaacaaatgaatggaaactgaacattcttaatggagttcacaaccatgtgatggagccggctttagaa 20286064  T
Q  102 agacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttgt 192  Q
     ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||  ||||||||||| |||||||||||    
T  20286065 ggacacatgcttgcgggtagattaaaggaggatgacaagaagattgtatgtgacttaaccaagagtaaggtgcttccaagaaatattttgt 20286155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 23028654 - 23028477
Alignment:
Q  20 atatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggt 119  Q
    ||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||| |||||| |   ||||||||||  ||||||||||||||||    
T  23028654 atatcttagtagggaaacaaatgattggagattgaatattattaatggagttcacaaccatgagatgaaggcaagtttagaagaacacatgcttgcgggt 23028555  T
Q  120 agattaaaggaggatggcaagaagcttgta-------tgtgacttgaccaagagtttggtgcttccaaaaaatatttt 190  Q
    ||||||| |||||||| ||||||| |||||        |||||||||||||||||||| ||||| |||||||||||||    
T  23028554 agattaagggaggatgacaagaagattgtacatgattggtgacttgaccaagagtttgatgctttcaaaaaatatttt 23028477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 163
Target Start/End: Complemental strand, 13158130 - 13157978
Alignment:
Q  11 ggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatg 110  Q
    |||||||| |||||||| || |||||||||||||| |||||| || ||||||||||||||||||||||| || ||| |   || |||| || ||| ||||    
T  13158130 ggttcgtggatatcttaataagcaaacaaatgattggagattgaacattcttaatggagttcacaaccatgaaatggagtcaaatttaaaaggacgcatg 13158031  T
Q  111 cttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaa 163  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  13158030 cttgcgggtagattaaaggaggatgacaagaaacttgtatgtgacttcaccaa 13157978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 20286483 - 20286650
Alignment:
Q  20 atatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggt 119  Q
    |||||||||||||||||||||||| | ||   | || ||||||||||||||| ||||||| | |||| | |    ||||||| |||||||||||||||||    
T  20286483 atatcttagtaggcaaacaaatgaatggaacctgaacattcttaatggagtttacaaccatgtgatggagccggctttagaaggacacatgcttgcgggt 20286582  T
Q  120 agattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatat 187  Q
    |||||||||||||||| ||| ||| |||||  ||||||||||||||||  ||||| ||||| ||||||    
T  20286583 agattaaaggaggatgacaaaaagattgtacatgacttgaccaagagtaaggtgcatccaagaaatat 20286650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 18537439 - 18537252
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| | ||||||| || | | |||| || ||||||||||||||||||||||| | |||  | | |  ||||||| |    
T  18537439 tgttcatgattagtggatatcaaagtaagaaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgattgagccagctttagaagg 18537340  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||||||||||  | ||||||||| ||||||||||    
T  18537339 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagtgagatgcttccaagaaatattttg 18537252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 7020892 - 7020796
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||||   | ||||||||| ||||||||||    
T  7020892 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtatgtgacttgaccaagaggaagatgcttccaagaaatattttg 7020796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 1035653 - 1035466
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| |  ||| | |    ||||||| |    
T  1035653 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgccatggagccggctttagaagg 1035554  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||  ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  1035553 acacattcttgccggtagattaaaggaggacgacaagaatattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 1035466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 25896204 - 25896017
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |    
T  25896204 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaagg 25896105  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  25896104 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 25896017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 27866857 - 27866761
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  27866857 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 27866761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 34078829 - 34078925
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  34078829 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 34078925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 7800109 - 7799922
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | |  ||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  7800109 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgggaattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagg 7800010  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||  |||||| |||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  7800009 acacattcttgtcggtagactaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 7799922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 32 - 191
Target Start/End: Complemental strand, 13567177 - 13567018
Alignment:
Q  32 gcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggag 131  Q
    ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | | |  ||||||| ||||||| ||||| |||||||||||| ||    
T  13567177 gcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccagctttagaaggacacattcttgccggtagattaaagaag 13567078  T
Q  132 gatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    || | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  13567077 gacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 13567018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Complemental strand, 4202989 - 4202855
Alignment:
Q  57 attcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgact 156  Q
    ||||||||||||||||||||||| | |||| | |    ||||||| ||||||  ||||| ||||||||||||||||| | ||||||| ||||| ||||||    
T  4202989 attcttaatggagttcacaaccatgcgatggagccggctttagaaggacacactcttgccggtagattaaaggaggacgacaagaagattgtacgtgact 4202890  T
Q  157 tgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||| ||||||   | |||||||||  |||||||||    
T  4202889 tgatcaagagcaagatgcttccaagtaatattttg 4202855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 38859291 - 38859137
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | |||||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  38859291 ttcatgattagtggatatcaaagtaagcaaacaaaagaatggagattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 38859192  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgac 160  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||    
T  38859191 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgac 38859137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 11032553 - 11032368
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  11032553 ttcatgattagtggatatcaaagtaagcaaacaaaagaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaatgac 11032454  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| || ||   | ||||||||| ||||||||||    
T  11032453 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaaaagcaagatgcttccaagaaatattttg 11032368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 37819978 - 37819793
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  37819978 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 37819879  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||  |||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  37819878 acattgttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 37819793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 28885404 - 28885324
Alignment:
Q  111 cttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  28885404 cttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 28885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 1036424 - 1036496
Alignment:
Q  119 tagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||||||||||| | ||||||  ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  1036424 tagattaaaggaggacgacaagaatattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 1036496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 6182653 - 6182822
Alignment:
Q  23 tcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtaga 122  Q
    |||||||||| ||||||| |||| |||||| ||||||||| |||||||||||||||| |||||| | | |||||||||| |||| ||||||||  ||| |    
T  6182653 tcttagtagggaaacaaacgattggagattgaatattcttgatggagttcacaaccatgagatgaagccaagtttagaaggacatatgcttgcaagtata 6182752  T
Q  123 ttaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttgt 192  Q
    |||| ||| | || ||||||  |||||  ||||||||||||||||||||||||| |||||||||||||||    
T  6182753 ttaagggatggtgacaagaaaattgtacatgacttgaccaagagtttggtgctttcaaaaaatattttgt 6182822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 18580431 - 18580244
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || |   ||||||| ||||||||||||||||||||||| |  ||| | |    ||||||| |    
T  18580431 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgaggattaaacattcttaatggagttcacaaccatgcaatgaagccggctttagaatg 18580332  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| | ||||||||||||||| | ||||||| ||||||||||||||||||||||   | ||||||||| ||||||||||    
T  18580331 acacattcttgccgatagattaaaggaggacgacaagaagattgtatgtgacttgaccaagagcaagatgcttccaagaaatattttg 18580244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 4976713 - 4976900
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||  |||||| | |||| | |    |||||||||    
T  4976713 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagtttgcaaccatgcgatggagccggctttagaaag 4976812  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||||| |||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  4976813 acacattcttgccggtagactaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 4976900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 9890982 - 9891167
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  9890982 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 9891081  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  9891082 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 9891167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 19072661 - 19072573
Alignment:
Q  103 gacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  19072661 gacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 19072573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 4979057 - 4978870
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||| |||||| | |||| | |  | ||||||| |    
T  4979057 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcccaaccatgcgatggagccgactttagaagg 4978958  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| |||||  | ||| ||||||| || | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  4978957 acacattcttgccagcagactaaaggatgacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 4978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 21471752 - 21471939
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| |   || |||| ||||    
T  21471752 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatacaatggagacaactttaaaaag 21471851  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||  | |||| |||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  21471852 acacattcttgaagatagaataaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 21471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 11502517 - 11502651
Alignment:
Q  57 attcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgact 156  Q
    ||||||||||||||||||| ||| | |||| | |    ||||||| ||||||| | ||| |||||||||||||| || | ||||||| ||||| ||||||    
T  11502517 attcttaatggagttcacacccatgcgatggagccggctttagaaggacacattcatgccggtagattaaaggaagacgacaagaagattgtacgtgact 11502616  T
Q  157 tgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||||||   | ||||||||| ||||||||||    
T  11502617 tgaccaagagcaagatgcttccaagaaatattttg 11502651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 4769178 - 4769275
Alignment:
Q  94 gtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||||| ||||||| ||| | ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||| ||| ||||||||||    
T  4769178 gtttagaaggacacattcttaccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgctttcaagaaatattttg 4769275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 49565565 - 49565380
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  49565565 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 49565466  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| | ||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  49565465 acattcttgccgatagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 49565380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 3404839 - 3404935
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| |||||  |||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  3404839 tttagaaggacacattcttgccagtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 3404935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 41024248 - 41024344
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| |  |||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  41024248 tttagaaggacacattcttgcaggtagattaaaggaggacgaaaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 41024344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 51643603 - 51643414
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagtt-cacaaccaagagatgtaacgaag-tttagaa 101  Q
    |||||||| || ||| |||||  |||| ||||||||| || | |||||| || ||||||||||||||| ||||| || | |||| | |   | |||| ||    
T  51643603 tgttcatgattagtggatatcaaagtaagcaaacaaaggaattgagattgaacattcttaatggagtttcacaaacatgcgatggagcccggctttataa 51643504  T
Q  102 agacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
     ||||||| |||||  |||||||||||||||| | ||||||| ||||| ||||||||||||||||     ||||| ||||||||||||||    
T  51643503 ggacacattcttgccagtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaaaatgctttcaaaaaatattttg 51643414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 17140547 - 17140622
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaacca 79  Q
    ||||||||||| ||| |||||  |||||||||||||| || | | |||| || |||||||||||||||||||||||    
T  17140547 tgttcatggttagtggatatcaaagtaggcaaacaaaggaatggggattgaacattcttaatggagttcacaacca 17140622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 191
Target Start/End: Complemental strand, 38463821 - 38463753
Alignment:
Q  123 ttaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||||||| | ||||||| ||| | ||||||||||||||||   | ||||||||||||||||||||    
T  38463821 ttaaaggaggacgacaagaagattgcacgtgacttgaccaagagcaagatgcttccaaaaaatattttg 38463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 191
Target Start/End: Complemental strand, 17997276 - 17997088
Alignment:
Q  3 atgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaa 102  Q
    ||||||| |||| ||| |||||||||||| |||||||| || | |||||| || |||||| ||| ||||| |||||| | |||| | |    |||||||     
T  17997276 atgttcaaggttagtggatatcttagtagacaaacaaaggaatggagattgaacattcttcatgaagttcgcaaccatgcgatggagccggctttagaag 17997177  T
Q  103 gacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||||||||| |||||||||||||||||||  |||||| ||||| ||||||||||||||||   ||||||||||| ||||||||||    
T  17997176 gacacatgcttgctggtagattaaaggaggatgataagaagattgtacgtgacttgaccaagagcaaggtgcttccaagaaatattttg 17997088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 4 - 188
Target Start/End: Complemental strand, 12907595 - 12907411
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | |||||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  12907595 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggagattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagg 12907496  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatatt 188  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| |||||||    
T  12907495 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatatt 12907411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 41008083 - 41007896
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || |   |||| || ||||||||||||||||||||||| | |||||| |    ||||||| |    
T  41008083 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgaggattgaacattcttaatggagttcacaaccatgcgatgtagccggctttagaatg 41007984  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  41007983 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 41007896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 436292 - 436456
Alignment:
Q  27 agtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaa 126  Q
    |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| ||||||| ||||| ||||||||||    
T  436292 agtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaaggacacattcttgccggtagattaa 436391  T
Q  127 aggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  436392 aggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 436456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 11692917 - 11692730
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || |   |||| || ||||||||||||||||||||||| | |||  | |  | ||||||| |    
T  11692917 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgaggattgaacattcttaatggagttcacaaccatgtgatcgagccgactttagaagg 11692818  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  11692817 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 11692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 43949385 - 43949198
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||| ||||||||||||||||||| | || | | |    ||||||| |    
T  43949385 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattattaatggagttcacaaccatgcgaaggagccggctttagaagg 43949286  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||   | ||||||||| ||||||||||    
T  43949285 acacattcttgccggtagattaaaggaggacggcaagaagattgtacatgacttgaccaagagcaagatgcttccaagaaatattttg 43949198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 7263992 - 7264177
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| |||    ||||||| |||    
T  7263992 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatctcatggaaccggctttagaaggac 7264091  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | || |||||| ||||||||||    
T  7264092 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatggttccaagaaatattttg 7264177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 3802578 - 3802482
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  3802578 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaataaatattttg 3802482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 27275372 - 27275276
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  27275372 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 27275276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 28355005 - 28354818
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||| ||||| | |||| | |    ||||||| |    
T  28355005 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcataaccatgcgatggagcctgctttagaatg 28354906  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||||| |||||||||| | ||||||| ||||| |||||||||||| |||   | ||||||||| ||||||||||    
T  28354905 acacattcttgctggtagactaaaggaggacgacaagaagattgtacgtgacttgaccatgagcaagatgcttccaagaaatattttg 28354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 212542 - 212357
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  212542 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 212443  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  212442 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 212357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 10623555 - 10623370
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  10623555 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 10623456  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  10623455 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 10623370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 5348216 - 5348312
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  5348216 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 5348312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 41561061 - 41561157
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  41561061 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 41561157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 45476407 - 45476503
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||| ||| ||||||||||    
T  45476407 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttacaagaaatattttg 45476503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 24605192 - 24605005
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    |||||||      
T  24605192 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagt 24605093  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||  |||||| |||||||||| | ||||||  ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  24605092 acacattcttgtcggtagactaaaggaggacgacaagaaaattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 24605005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 24750616 - 24750803
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |    
T  24750616 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggatttagaagg 24750715  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||||| ||||||| |||||  ||| |||||| ||||   | ||||||||| ||||||||||    
T  24750716 acacattcttgccggtagattaaaggaggatgacaagaagattgtacatgaattgaccgagagcaagatgcttccaagaaatattttg 24750803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 34920794 - 34920698
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||| | |||| |||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  34920794 tttagaaggacacattcttaccggtaaattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 34920698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 38946723 - 38946908
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  38946723 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 38946822  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| |||||||||||||||||   ||||||| | ||| ||||||||||||||||   | ||||||||  ||||||||||    
T  38946823 acattcttgccggtagattaaaggaggacaacaagaagatcgtacgtgacttgaccaagagcaagatgcttccatgaaatattttg 38946908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 39794930 - 39795115
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| | |    
T  39794930 ttcatgattagtggatatcaaagtaagcaaacaaaagaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaagggc 39795029  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| || ||   | ||||||||| ||||||||||    
T  39795030 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaaaagcaagatgcttccaagaaatattttg 39795115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 34920875 - 34920802
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaac 77  Q
    |||||||| || ||| |||||  |||| ||||||||| || | |||||| || |||||||||||||||||||||    
T  34920875 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggagattgaacattcttaatggagttcacaac 34920802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 8400544 - 8400731
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    ||||||||||| ||| ||||||||||||||||||||| || | | |||| || ||| | ||||||||||||||||| | |||| | |    ||||||| |    
T  8400544 tgttcatggttagtggatatcttagtaggcaaacaaaagaatggggattgaacattttcaatggagttcacaaccatgcgatggagccggctttagaagg 8400643  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||||   | || | |||||||||||||||    
T  8400644 acacattcttgctggtacattaaaggaggatgacaagaagattgtaggtgacttgaccaagagcaagatgttaccaaaaaatattttg 8400731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 43827709 - 43827522
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    ||||||||||| ||| |||||||||||| |||||||| || | | |||| || ||||||||||||||||||||||| | || | | | |  ||||||| |    
T  43827709 tgttcatggttagtggatatcttagtagacaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgaaggagccagctttagaatg 43827610  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||| | ||||||||||||||||| |  |||||| ||||| |||||||||||||| |   | ||||||||| ||||||||||    
T  43827609 acacattcttaccggtagattaaaggaggacgaaaagaagattgtacgtgacttgaccaagtgcaagatgcttccaagaaatattttg 43827522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 47061841 - 47062028
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || |   |||| || ||||||||||||||||||||||| | |||| | |  | ||| ||| |    
T  47061841 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgaggattgaacattcttaatggagttcacaaccatgcgatggagccgacttttgaagg 47061940  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||| ||| ||||||||||||||||||||||   | ||||||||| ||||||||||    
T  47061941 acacattcttgccggtagattaaaggaggacgacaaaaagattgtatgtgacttgaccaagagcaagatgcttccaagaaatattttg 47062028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 21799969 - 21800156
Alignment:
Q  3 atgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaa 102  Q
    |||||||||||| ||| ||||||||||||| |||||||  | | |||||| || ||| ||||||||||||||||||| | |||| |      |||||||     
T  21799969 atgttcatggttagtggatatcttagtaggaaaacaaagcaatggagattgaacattgttaatggagttcacaaccatgcgatggagtcggctttagaag 21800068  T
Q  103 gacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatatttt 190  Q
    |||||||| |||  ||||||||||||||||||  ||||||  || || ||||||| | ||||||   ||||| |||||||||||||||    
T  21800069 gacacatgtttgtcggtagattaaaggaggataacaagaaaattatacgtgacttaatcaagagcaaggtgcatccaaaaaatatttt 21800156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 617850 - 617665
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  617850 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 617751  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  617750 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 18106348 - 18106533
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  18106348 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 18106447  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | ||||||||| ||||||||||    
T  18106448 acattcttgcaggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaagagcaagatgcttccaagaaatattttg 18106533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 30787499 - 30787684
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  30787499 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 30787598  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  30787599 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 30787684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 43623236 - 43623051
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  43623236 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 43623137  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  43623136 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 43623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 45764339 - 45764524
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  45764339 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaatgac 45764438  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  45764439 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 45764524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 20908568 - 20908433
Alignment:
Q  56 tattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgac 155  Q
    |||||||||||||||||||||||| |||| |     ||  |||||| | ||||| ||||| || ||||||| |||||||| ||||||| ||||  |||||    
T  20908568 tattcttaatggagttcacaaccatgagacgacggcaatgttagaagggcacattcttgcaggaagattaagggaggatgacaagaagattgtgcgtgac 20908469  T
Q  156 ttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    || ||||||||||||||||  | |||||||||||||    
T  20908468 tttaccaagagtttggtgcaacaaaaaaatattttg 20908433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 15060662 - 15060758
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| |||||   | |||||||||  |||||||||    
T  15060662 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtaagtgacttgacaaagagcaagatgcttccaaggaatattttg 15060758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 42500367 - 42500526
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | |||||| || |||||||||||||||||||||||    ||| | |    ||||||| ||     
T  42500367 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggagattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggaa 42500466  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaaga 165  Q
    |||| ||||| ||||||||||||||||| | ||||||| ||||| |||||||||| ||||    
T  42500467 acattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgacaaaga 42500526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 3761964 - 3762050
Alignment:
Q  105 cacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||||||| ||| ||||||| ||| |||| ||| ||| || || || ||||||||||||||||| |||  |||||||||||||||    
T  3761964 cacatgcttgagggaagattaagggaagatgacaaaaagattctaggtaacttgaccaagagtttgatgcagccaaaaaatattttg 3762050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 191
Target Start/End: Complemental strand, 16794600 - 16794529
Alignment:
Q  120 agattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| |||||| | ||||||| |||||  |||||||||||| |||||||||   |||||||||||||||    
T  16794600 agattaatggaggacgacaagaagattgtacatgacttgaccaatagtttggtgaaaccaaaaaatattttg 16794529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 8194276 - 8194196
Alignment:
Q  111 cttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||||| ||||||| |||||| | ||||||| |||||  |||||||| ||| |||| ||||   |||||||||||||||    
T  8194276 cttgcgggaagattaatggaggacgacaagaagattgtacatgacttgagcaatagttcggtgaaaccaaaaaatattttg 8194196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 7168858 - 7169045
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    ||||||||||| ||| |||||  |||||||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |  | ||||||| |    
T  7168858 tgttcatggttagtggatatcaaagtaggcaaacaaaggagtggggattgaacattcttaatggagttcacaaccatgcgatggagccgactttagaagg 7168957  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    | |||| |||||  |||||||||||||||| | ||||| | ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  7168958 atacattcttgctagtagattaaaggaggacgacaagatgattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 7169045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 35965848 - 35965661
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  35965848 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagg 35965749  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  35965748 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 35965661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 22580914 - 22581048
Alignment:
Q  57 attcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgact 156  Q
    ||||||||||||||| ||||||| | |||| | |  | ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||    
T  22580914 attcttaatggagtttacaaccatgcgatggagccgactttagaaggacacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgact 22581013  T
Q  157 tgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||||||   | ||||||||| ||||||||||    
T  22581014 tgaccaagagcaagatgcttccaagaaatattttg 22581048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 39752131 - 39751944
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| |||||||||||| | | |||| || ||||||||||||||||||||||| |  ||| |||    ||||||| |    
T  39752131 tgttcatgattggtggatatcaaagtaagcaaacaaatgaatggggattgaacattcttaatggagttcacaaccatgcaatggaaccggctttagaatg 39752032  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||| ||   ||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  39752031 acatatttatgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 39751944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 45455334 - 45455521
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | ||||  | ||||||||||||||| ||||||| | |||| | |  | ||||||| |    
T  45455334 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattggacattcttaatggagttaacaaccatgcgatggagccgactttagaagg 45455433  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||     ||||||||| ||||||||||    
T  45455434 acacattcttgccggtagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaaaatgcttccaagaaatattttg 45455521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 191
Target Start/End: Complemental strand, 14401825 - 14401688
Alignment:
Q  56 tattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgta--tgtg 153  Q
    |||||||||||||||||||||||| ||  ||   | |||||||||| | ||||| ||||| || ||||||| ||| |||| ||||||| |||||  | ||    
T  14401825 tattcttaatggagttcacaaccatgaattggtgccaagtttagaatggcacattcttgcaggaagattaagggatgatgacaagaagattgtacatatg 14401726  T
Q  154 acttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||||||||||||||||||  |||||||||||||||    
T  14401725 acttgaccaagagtttggtgccaccaaaaaatattttg 14401688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 43370725 - 43370912
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | | || || ||||||||||||||||||||||| | |||| |      ||||||| |    
T  43370725 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggtttgaacattcttaatggagttcacaaccatgcgatggagtcggctttagaagg 43370824  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||||| |||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  43370825 acacattcttgccggtagactaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 43370912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 191
Target Start/End: Complemental strand, 43689274 - 43689087
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| |      ||||||| |    
T  43689274 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggatttaacattcttaatggagttcacaaccatgcgatggagtcggctttagaagg 43689175  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| ||||||||||| ||||| | ||||||| ||||| ||||||||||||||||   | |||||| || ||||||||||    
T  43689174 acacattcttgccggtagattaaaagaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttcgaagaaatattttg 43689087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 7341039 - 7341224
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  7341039 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 7341138  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  7341139 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 7341224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 8422957 - 8422772
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | ||||||| ||||||||||||||||||||| |    ||| | |    ||||||| |||    
T  8422957 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattaaacattcttaatggagttcacaactatcccatggagccggctttagaatgac 8422858  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  8422857 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 8422772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 30304711 - 30304526
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  30304711 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 30304612  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  30304611 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 30304526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 32378009 - 32377824
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  32378009 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 32377910  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  32377909 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 32377824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 32431966 - 32431781
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  32431966 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 32431867  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  32431866 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 32431781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 1115821 - 1115917
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  1115821 tttagaaggacacattcttgccggtagattaaaggaggacgacaagaagatagtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 1115917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 2146070 - 2145948
Alignment:
Q  27 agtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaa 126  Q
    |||| |||||||||||| | |||||| || ||| ||||||||||||||||||| | |||| | |  | ||||||| |||| || ||||| ||||||||||    
T  2146070 agtaagcaaacaaatgaatggagattgaacatttttaatggagttcacaaccatgcgatggagccgactttagaaggacatattcttgccggtagattaa 2145971  T
Q  127 aggaggatggcaagaagcttgta 149  Q
    ||||||| | ||||||| |||||    
T  2145970 aggaggacgacaagaagattgta 2145948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 17027 - 17214
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  17027 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatagggattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagg 17126  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||| |||||| |||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  17127 acacattcttgccggtagactaaaggaggacgacaagaagattgtaagtgacttgaccaagagcaagatgcttccaagaaatattttg 17214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 18606954 - 18607141
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |  | ||||||| |    
T  18606954 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagccgactttagaagg 18607053  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||||  | ||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  18607054 acacattcttgtcgatagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 18607141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 28250856 - 28251041
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | | |  ||||||| |||    
T  28250856 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccagctttagaaggac 28250955  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| | ||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  28250956 acattcttgccgatagattaaaggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 28251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 31147333 - 31147442
Alignment:
Q  57 attcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgact 156  Q
    ||||||||||||||||||||||| | |||| | |  | ||||||| ||||||| ||||| ||||||||||||||| ||| ||||||| ||||| ||||||    
T  31147333 attcttaatggagttcacaaccatgcgatggagccgactttagaaggacacattcttgccggtagattaaaggagaatgacaagaagattgtacgtgact 31147432  T
Q  157 tgaccaagag 166  Q
    ||| ||||||    
T  31147433 tgatcaagag 31147442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 166
Target Start/End: Original strand, 7362137 - 7362299
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || |   |||| || ||||||||||||||||||||||| | |||| |    | ||||||| |    
T  7362137 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatgtggattgaacattcttaatggagttcacaaccatgcgatggagtcgactttagaatg 7362236  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagag 166  Q
    |||||| ||||| |||||| |||||||||| | ||||||| ||||| ||||||||||||||||    
T  7362237 acacattcttgccggtagactaaaggaggacgacaagaagattgtacgtgacttgaccaagag 7362299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 24220128 - 24220286
Alignment:
Q  8 catggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacac 107  Q
    ||||||| ||| ||||||||||||| |||||||||| | | |||| || |||||||||| |||||||||||| | |||| |      ||||||| |||||    
T  24220128 catggttagtggatatcttagtaggaaaacaaatgaatggggattgaaaattcttaatgcagttcacaaccatgcgatggagtcggctttagaaggacac 24220227  T
Q  108 atgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagag 166  Q
    || ||||  ||||||||||||||||| | ||||||  || || ||||||||||||||||    
T  24220228 attcttgtcggtagattaaaggaggacgacaagaaaattatacgtgacttgaccaagag 24220286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Complemental strand, 1611852 - 1611667
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  1611852 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 1611753  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  1611752 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 1611667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 29288028 - 29287864
Alignment:
Q  27 agtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaa 126  Q
    |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| |      |||| || ||||||| ||||| |||||| |||    
T  29288028 agtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatgcgatggagtcggctttataaggacacattcttgccggtagactaa 29287929  T
Q  127 aggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  29287928 aggaggacgacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 29287864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 21358359 - 21358263
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| | ||||||||||||||| | ||||||| |||||  |||||||||||||||   | ||||||||| ||||||||||    
T  21358359 tttagaaggacacattcttgccgatagattaaaggaggacgacaagaagattgtacatgacttgaccaagagcaagatgcttccaagaaatattttg 21358263  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 23962341 - 23962245
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| | ||||||||||||||| | ||||||| |||||  |||||||||||||||   | ||||||||| ||||||||||    
T  23962341 tttagaaggacacattcttgccgatagattaaaggaggacgacaagaagattgtacatgacttgaccaagagcaagatgcttccaagaaatattttg 23962245  T

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Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 34111713 - 34111598
Alignment:
Q  56 tattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgac 155  Q
    |||||||||||||||||||||||| ||||||   | ||  |||||| |  | || ||||| || ||||||||||| |||| | ||||| ||||| |||||    
T  34111713 tattcttaatggagttcacaaccatgagatggcgccaaagttagaagggaaaattcttgcaggaagattaaaggaagatgactagaagattgtacgtgac 34111614  T
Q  156 ttgaccaagagtttgg 171  Q
    ||||||||||||||||    
T  34111613 ttgaccaagagtttgg 34111598  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 35243561 - 35243636
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaacca 79  Q
    |||||||| || ||| |||||  |||| |||||||||||| | | |||| || |||||||||||||||||||||||    
T  35243561 tgttcatgattagtggatatcaaagtaagcaaacaaatgaatggggattgaacattcttaatggagttcacaacca 35243636  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 13387795 - 13387722
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaacca 79  Q
    |||||| |||||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    
T  13387795 ttcatgattcgtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaacca 13387722  T

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Target: scaffold0341 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 16369 - 16273
Alignment:
Q  95 tttagaaagacacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    ||||||| ||||||| ||||| ||||||||||||||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  16369 tttagaaggacacattcttgccggtagattaaaggaggaagacaagaagattgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 16273  T

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Target: scaffold0494 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 1841 - 2026
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  1841 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 1940  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  1941 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 2026  T

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Target: scaffold0101 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 33769 - 33954
Alignment:
Q  6 ttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaagac 105  Q
    |||||| || ||| |||||  |||| ||||||||| || | | |||| || |||||||||||||||||||||||    ||| | |    ||||||| |||    
T  33769 ttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcacaaccatcccatggagccggctttagaaggac 33868  T
Q  106 acatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||| ||||| ||||||||||||||||| | ||||||| | ||| ||||||||||||||||   | ||||||||| ||||||||||    
T  33869 acattcttgccggtagattaaaggaggacgacaagaagatcgtacgtgacttgaccaagagcaagatgcttccaagaaatattttg 33954  T

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Target: scaffold0116 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 12220 - 12407
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||| ||||| |  ||| | |    ||||||| |    
T  12220 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggggattgaacattcttaatggagttcaaaaccatgccatggagctggctttagaagg 12319  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagagtttggtgcttccaaaaaatattttg 191  Q
    |||||| ||| | |||||||||| |||||| | ||||||| ||||| ||||||||||||||||   | ||||||||| ||||||||||    
T  12320 acacattctttccggtagattaatggaggacgacaagaagattgtacgtgacttgaccaagagaaagatgcttccaagaaatattttg 12407  T

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Target: scaffold0340 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 273 - 111
Alignment:
Q  4 tgttcatggttcgtgaatatcttagtaggcaaacaaatgattcgagattaaatattcttaatggagttcacaaccaagagatgtaacgaagtttagaaag 103  Q
    |||||||| || ||| |||||  |||| ||||||||| || | | |||| || ||||||||||||||||||||||| | |||| | |    ||||||| |    
T  273 tgttcatgattagtggatatcaaagtaagcaaacaaaggaatggtgattgaacattcttaatggagttcacaaccatgcgatggagccggctttagaagg 174  T
Q  104 acacatgcttgcgggtagattaaaggaggatggcaagaagcttgtatgtgacttgaccaagag 166  Q
    |||||| ||| || ||||| |||||||| | | ||||||| ||||| ||||||||||||||||    
T  173 acacattcttacgagtagactaaaggagaacgacaagaagattgtacgtgacttgaccaagag 111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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