View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6863A_low_309 (Length: 221)
Name: NF6863A_low_309
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6863A_low_309 |
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Alignment Details
Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 7305331 - 7305517
Alignment:
| Q |
21 |
aacagtgaggcattcccaagatagccagtgcatacctctattaccaccattaccgtgtccccacgagaatgcatttaacatatttttcaatttcctttat |
120 |
Q |
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| T |
7305331 |
aacagtgaggcattcacaagatagccggtgcatacctctattaccaccattaccgtgtccccactagaatgcatttaacatatttttcaatttcctttat |
7305430 |
T |
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| Q |
121 |
cagggtgttaggtagcaagaaggtactcacgacataagtagggattgattgaatgacgaattttataagaacttccctttctgcctc |
207 |
Q |
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| T |
7305431 |
cagggtgttaggtagcaagaaggtactcacgacataagtagggattgattgaaggacgaattttataagaacttccctttctgcctc |
7305517 |
T |
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