View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6863A_low_340 (Length: 204)
Name: NF6863A_low_340
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6863A_low_340 |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 14801667 - 14801843
Alignment:
| Q |
1 |
aaaacgcttccatttacaataataaacaatttaagaagctccattcgcaataattgtgatcacacagccacataagactcatttaatctcataaggattg |
100 |
Q |
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| T |
14801667 |
aaaacgcttccatttacaataataaacaatttaagaagctccatttgcaataattgtgatcacacagccacataagactcatttaatctcataaggattg |
14801766 |
T |
|
| Q |
101 |
aatttttattcaagttctgctttggttttgattcaatttttgttgttgatcataacggtattttgcctggtacttaa |
177 |
Q |
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| T |
14801767 |
aatttttattcaagttctgctttggttttgattcaatttttgttgttgatcataacggtattttgcctggtacttaa |
14801843 |
T |
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