View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6863A_low_4 (Length: 614)
Name: NF6863A_low_4
Description: NF6863A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6863A_low_4 |
 | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold0274 (3 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 449; Significance: 0; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 12 - 580
Target Start/End: Complemental strand, 19415364 - 19414796
Alignment:
| Q |
12 |
agaaagacatgttctgaggaatttcaccgtagaacttattatttgggaagactcgagattcactattttcccagtcaccaatctgcttaggaattgttac |
111 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| || | || ||||||| |||||| | |||||||||| |||||||||||||| | |
|
|
| T |
19415364 |
agaaagacatgctctgaggaatttcaccgtagaacttattatttgagaggtctagagattccatatttttcatgtcaccaatcagcttaggaattgttcc |
19415265 |
T |
|
| Q |
112 |
agtcattttattatgagataagcttagtggttgtatttgaacccgtcgaattacttccaatgtcacttctccagacaagctattggatgaaaggtcaata |
211 |
Q |
| |
|
||||| ||||| ||||||||| ||| || |||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19415264 |
agtcaaattattgtgagataagtttaatgtttgtatttgaacaagtcgaaataattgcaatgtcacttctccagacaagctattggatgaaaggtcaata |
19415165 |
T |
|
| Q |
212 |
gttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaatcaattgtggtagaataccataaacttaaatgaaaagtaaccatat |
311 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19415164 |
gttcgcctatccggactaacatgatacacataatcttgacctttgataaataaatcaattgtggtagaataccataaacttaaatgaaaagtaaccatat |
19415065 |
T |
|
| Q |
312 |
gagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaat |
411 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
19415064 |
gagtcaagttgtagacgctgtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagctgtggtggaat |
19414965 |
T |
|
| Q |
412 |
agtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcccaaattcatg |
511 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19414964 |
agtcccttcaaatcggttatctctcaatatgaccacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcccaaattcatg |
19414865 |
T |
|
| Q |
512 |
actcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactccacaggttc |
580 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19414864 |
actcttaattgcttccaaccagagcagtacaaaggaacttcaccagatagcctattactccacaggttc |
19414796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 166 - 580
Target Start/End: Complemental strand, 19376648 - 19376234
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| |||||||||||| ||||||| |
|
|
| T |
19376648 |
ttccaatggcaattctccagacaagctattggatgaaaggtcaatagttcgcctatccggcttaacatcatacacatattcttgacctttggtaaataac |
19376549 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||||||||| || ||| || || ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
19376548 |
tcaattgtgttaacataatatgaataaaaatgaaaagtaaccatattagtcaagttgtagatgcagtgtggaaaagatcctgaaagtttgttatgtgcaa |
19376449 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||||| ||| ||||||||||||| | | |||||| |||||||| |
|
|
| T |
19376448 |
ggtctaagtgaaacaaataagagagattgaatagttgttgtggaatagtcccttcaaatttattagctctcaatatgaccaaatataagttttgtgacat |
19376349 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagccta |
565 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||| || | ||||| || || |||||| || |||||||||||||||||||| |
|
|
| T |
19376348 |
cttgattggtatggttccagaaaattcattttctcccaaattcaagaattgcaattgatttgaagcagagaggtgagctagaacttcaccagatagccta |
19376249 |
T |
|
| Q |
566 |
ttactccacaggttc |
580 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
19376248 |
ttactccataggttc |
19376234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 166 - 512
Target Start/End: Complemental strand, 19381919 - 19381573
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||| ||| | |||| ||||||||| |||||||||||| |||||||| |
|
|
| T |
19381919 |
ttccaatggcatttctccagacaagctattgggtgaaaggtcaatagttcgcctatccgggtttacatcatacacatattcttgacctttggtaaataaa |
19381820 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||||||||||||||||| || | | ||||||||||||||||||||| |||||||||| ||| ||||| |||||||| |||| |||||||||||||| |
|
|
| T |
19381819 |
tcaattgtggtagaatacaattcataaatatgaaaagtaaccatatgagtaaagttgtagatgcaatgtggaaaagatccagaaaatttgttatgtgcaa |
19381720 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| |||||| |||||| ||||||||||| ||||| ||||||||||||| | ||||||||| | ||| | |
|
|
| T |
19381719 |
ggtctaagtgaaacaaataagagagattgaataattgtggtggaatattcccttcaaattggttagctctcaatatgacaatttctaagttttctgataa |
19381620 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatga |
512 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19381619 |
gttcattggtatggttccagaaaattcattttctcccaaattcatga |
19381573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 166 - 575
Target Start/End: Complemental strand, 18166182 - 18165773
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||| ||||||||||||||| || ||| |||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
18166182 |
ttccaatggtacttctccagacaagctattgtttgaaatgtcaatagttcgcctttccgggttaacatcatacacataatcttgacctttggtaaataaa |
18166083 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||||||||| || | |||| | | | || |||| |||| || |||||||||||||| || |||||||||||||||||||||||||||| |||| |
|
|
| T |
18166082 |
tcaattgtggcaggacgccatgcatacacacgatcagtatccatttgtgtcaagttgtagacacaatgtggcaaagatcctgaaagtttgttattcgcaa |
18165983 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| |||||| |||||||||||||||||| ||||| ||||||||||||| |||||||| || ||||| || |
|
|
| T |
18165982 |
ggtctaagtgaaacaaattagagagattgaatatttgtggtggaatagtcccttcaaattggttagctctcaatatgaccacttctaacttttgtgaaat |
18165883 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagccta |
565 |
Q |
| |
|
|| ||||||||||||||| ||||||||||||||||||| ||||||| | ||||| ||| || | ||||||| ||| | |||||||||| |||||||| |
|
|
| T |
18165882 |
caaaattggtatggttccagaaaattcattttctcccaagttcatgatttccaattggttcaaatcggagaagtgcaatgaaacttcaccaaatagccta |
18165783 |
T |
|
| Q |
566 |
ttactccaca |
575 |
Q |
| |
|
|||||||||| |
|
|
| T |
18165782 |
ttactccaca |
18165773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 166 - 575
Target Start/End: Complemental strand, 19465379 - 19464970
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || ||||||||||||||| || ||| || || |||||| |||||||||||||||| |||||||| |
|
|
| T |
19465379 |
ttccaatggcacttctccagacaagctattggctggaaggtcaatagttcgtcttcttggactgactcgatacatataatcttgacctttggtaaataaa |
19465280 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||||||||||||| ||||||| | | |||| |||| |||| |||||||||||||| || ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19465279 |
tcaattgtggtaggataccatccataaacatgatcagtatccatttgagtcaagttgtaaacacagtgtggcaaagatcctgaaagtttgttatttgcaa |
19465180 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
||||||||||||||||| | ||||| |||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||| ||||| || |
|
|
| T |
19465179 |
ggtctaagtgaaacaaaatatggagatcaaatagttgtggtggaatagtcccttcaaattggttagctctcaatatgaccacttctaagtcttgtgaaat |
19465080 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagccta |
565 |
Q |
| |
|
|| ||| |||||||||||| ||||||||||||| ||||| |||||| | ||||| ||| || |||||||| ||| | ||||||||||||||||||| |
|
|
| T |
19465079 |
caagataggtatggttccagaaaattcattttcgcccaagttcatgttttccaattggttcaaattagagaagtgcaacgaaacttcaccagatagccta |
19464980 |
T |
|
| Q |
566 |
ttactccaca |
575 |
Q |
| |
|
|||||||||| |
|
|
| T |
19464979 |
ttactccaca |
19464970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 166 - 580
Target Start/End: Original strand, 18872852 - 18873266
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||| ||| | |||| | |||||||||||||||||||| |||| ||| |
|
|
| T |
18872852 |
ttccaatagcacttctccagtcaagtgattggctgaaaggtcaatagttcgcctatatggattgacatcaaacacataatcttgacctttggtaaacaaa |
18872951 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||| || || ||||||| || | || | | |||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18872952 |
tcaacgatgttatcataccatgaattcaagtaatgagtatccatttgagtcaagttgtagacacagtttggcaaagatcctgaaagtttgttatgtgcaa |
18873051 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| | |||| ||||||||||| ||||| ||||||||||||||||||||| ||| |||||||| |
|
|
| T |
18873052 |
ggtccaagtgaaacaaattagagagattaaatagttgtggtgaaatattcccttcaaattggttagctctcaatatgactacttctaggttttgtgacat |
18873151 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactct-taattgcttccaaccagagaagtacaaaggaacttcaccagatagcct |
564 |
Q |
| |
|
||||| ||||||| ||||| |||||||||||||||||||||||| || ||| || || ||||| |||||| || ||||||||||||||||||| |
|
|
| T |
18873152 |
catgaatggtatgtttccagaaaattcattttctcccaaattcaaga-tctgcaactgtttccattcagagaggtgatcttgaacttcaccagatagcct |
18873250 |
T |
|
| Q |
565 |
attactccacaggttc |
580 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
18873251 |
attactccacaggttc |
18873266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 166 - 512
Target Start/End: Complemental strand, 17942980 - 17942634
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||||||| | ||| ||||| ||||||||||| |||||||| | |||||||||| |||||| ||||||||||||||| |||||||| |
|
|
| T |
17942980 |
ttccaatggaacttctccaaataagttattgaccgaaaggtcaatcgttcgcctgttcgggctaacataatacacgtaatcttgacctttggtaaataaa |
17942881 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||| |||||| ||||||| || | |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
17942880 |
acaacagtggtaacataccatgaatccatatgatcagtatccatttgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatttgcaa |
17942781 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||| | |||||||||||||||||| ||||| ||||||||||||| |||| |||||| ||||| | |
|
|
| T |
17942780 |
ggtctaagtgaaacaaataggagagattgaatagttgttgcggaatagtcccttcaaattggttagctctcaatatgaccacttgtaagttttgtgataa |
17942681 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatga |
512 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
17942680 |
gctgattggtatggttccaaaaaactcattttctcccaaattcatga |
17942634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 166 - 580
Target Start/End: Complemental strand, 18017048 - 18016634
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||| ||| |||||| | ||||||||| |||||||||| |||||||| |
|
|
| T |
18017048 |
ttccaatggcacttctccagtcaagtgattggctgaaaggtcaatagttcgcctatccgggttaacatcacacacataatattgacctttggtaaataaa |
18016949 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||||| |||||| |||||||||| | |||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
18016948 |
tcaatggtggtatcataccataaatccacatgatcagtatccatttgagtcaagttgtagacaaagtgtggcaaagatcctgaaagtttgttatgtgcaa |
18016849 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| |||| | |||||| ||||||||||| || ||||||||||||| ||| |||||| |||||||| |
|
|
| T |
18016848 |
ggtctaagtgaaacaaataagagagattgaataattgtcgtggaataatcccttcaaatttattggctctcaatatgaccactcttaagttttgtgacat |
18016749 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagccta |
565 |
Q |
| |
|
| | ||||||| ||||| |||||||||||| |||||| |||||| | ||||| ||||| ||||| ||| || |||| ||| ||||| ||| || |
|
|
| T |
18016748 |
ccctactggtatgtttccagaaaattcattttttcccaagttcatgtcctgtaattctttccagttagagatgtataatggaagttccccagacagctta |
18016649 |
T |
|
| Q |
566 |
ttactccacaggttc |
580 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
18016648 |
ttattccacaggttc |
18016634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 166 - 511
Target Start/End: Complemental strand, 19352418 - 19352073
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||| | |||||||| |||||||||| |||||||| |
|
|
| T |
19352418 |
ttccaatggaacttctccagacaagctattggatgaaaggtcaacagttcgcctatgcgggttaacatcagtcacataatattgacctttggtaaataaa |
19352319 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||| ||||||| |||||| | | | |||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
19352318 |
tcaagggtggtagcgtaccattcattcacatgatcagtatccatttgagtcaagttgtagacaaagtgtggcaaagatcctgaaagtttgttatgtgcaa |
19352219 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| |||| | |||||| ||||||||||| || |||| |||||||| ||| ||||||| |||||||| |
|
|
| T |
19352218 |
ggtctaagtgaaacaaataagagagattgaataattgttgtggaataatcccttcaaatttattggctctaaatatgaccactactaagttttgtgacat |
19352119 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatg |
511 |
Q |
| |
|
| | |||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
19352118 |
ccctaccggtatgtttccagaaaattcattttctcccaagttcatg |
19352073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 119 - 575
Target Start/End: Complemental strand, 25464123 - 25463667
Alignment:
| Q |
119 |
ttattatgagataagcttagtggttgtatttgaacccgtcgaattacttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcc |
218 |
Q |
| |
|
||||| ||||||||| ||| || ||| | ||||||| | |||| | |||||||| |||||||||||||||| |||||| |||||||||||||||||| | |
|
|
| T |
25464123 |
ttattgtgagataagtttaatgtttgaacttgaaccagccgaaccaattccaatggcacttctccagacaagttattggctgaaaggtcaatagttcgtc |
25464024 |
T |
|
| Q |
219 |
tatctgggctaacatgatacacataatcttgacctttgataaataaatcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaa |
318 |
Q |
| |
|
| || || | | | ||| ||||||||||||||||| |||| || |||||| | ||| |||| | | | |||||||||||||||||| |||||| |
|
|
| T |
25464023 |
tttccggtccggcttcataaacataatcttgaccttttgtaaacaactcaattatagtactatacaaattagtataatgaaaagtaaccatatcagtcaa |
25463924 |
T |
|
| Q |
319 |
gttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtccct |
418 |
Q |
| |
|
||||||| ||| | ||||| ||||||||||||||||||| |||||||||| || |||||||||| || |||||| ||||||||||| |||||| ||||| |
|
|
| T |
25463923 |
gttgtagttgcactttggcagagatcctgaaagtttgttacgtgcaaggtccaaatgaaacaaataagtgagattgaatagttgtggtggaatattccct |
25463824 |
T |
|
| Q |
419 |
tcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcccaaattcatgactctta |
518 |
Q |
| |
|
|||||| |||| ||||||||||||| |||||||||| ||| ||| | ||||||||||||||| ||||||||||||||||||| ||||||| | | |
|
|
| T |
25463823 |
tcaaattggtttgctctcaatatgaccacttctaagtatagtggcatgttcattggtatggttccagaaaattcattttctcccaagttcatgatttcca |
25463724 |
T |
|
| Q |
519 |
attgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactccaca |
575 |
Q |
| |
|
|||| ||||| |||||| || | ||||||||||||||||||||||| |||||| |
|
|
| T |
25463723 |
attgtctccaatcagagaggtgtactagaacttcaccagatagcctattattccaca |
25463667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 166 - 501
Target Start/End: Complemental strand, 16678236 - 16677901
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| |||||||||||||||| |||||| ||||||||||||||||| || || ||| |||||| ||||||||||||||||||||| |||| || |
|
|
| T |
16678236 |
ttccaatggcacttctccagacaagttattggctgaaaggtcaatagttcttctgtccgggttaacatcatacacataatcttgaccttttgtaaacaat |
16678137 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||||||| | | ||||||| || | || |||||||||| |||| ||||||||| |||||| | | ||||| |||||||||||||||||||||||||| |
|
|
| T |
16678136 |
tcaattgtagccggataccatgaattcaagtgaaaagtaatcatactagtcaagttatagacgtactttggcatagatcctgaaagtttgttatgtgcaa |
16678037 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
| || || ||||||||| ||||||||| |||| ||| | |||||| | |||||||| ||||| |||||||||| || ||||||||||| |||||||| |
|
|
| T |
16678036 |
gatccaaatgaaacaaagaagagagattgaataactgtagtggaatacttccttcaaaatggttagctctcaatataacaacttctaagttttgtgacat |
16677937 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcc |
501 |
Q |
| |
|
| | ||||||||||||||| |||||||||||||||| |
|
|
| T |
16677936 |
cttaattggtatggttccagaaaattcattttctcc |
16677901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 166 - 580
Target Start/End: Complemental strand, 19437984 - 19437570
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| |||||||||||||||| |||| | ||||||||||||||||||||| ||| | | | || |||||||||||||| |||| || |
|
|
| T |
19437984 |
ttccaatggcacttctccagacaagttattcgctgaaaggtcaatagttcgcctttcttgttggattctcgaaacgtaatcttgaccttttgtaaaaaac |
19437885 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||||||||||||| | || | || || ||||| |||||||||| ||||||| |||||||| || | || || ||| || ||||||||||||||||||| |
|
|
| T |
19437884 |
tcaattgtggtagtaaacaaagaagtttcatgaatagtaaccatacgagtcaaattgtagacacactttgtcatagaaccagaaagtttgttatgtgcaa |
19437785 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||| ||||| ||||||||| ||||||||| | |||||||||||||||||| ||| ||||||||||||| |||| |||||| |||||||| |
|
|
| T |
19437784 |
ggtctaagtgaatcaaataagagagattgaatagttgttgcggaatagtcccttcaaatttattagctctcaatatgaccacttttaagttttgtgacat |
19437685 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagccta |
565 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| || |||||| | ||||| |||| |||||||||||| |||| ||| || || | |||| |
|
|
| T |
19437684 |
catgattggtatggttccagaaaattcattttctcctaagttcatggtttccaattgtttccggttagagaagtacaatggaagttcccctgacaaccta |
19437585 |
T |
|
| Q |
566 |
ttactccacaggttc |
580 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
19437584 |
ttactccacaggttc |
19437570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 166 - 511
Target Start/End: Complemental strand, 19354741 - 19354396
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
||||||||| |||||||| |||| |||| |||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||| |||||||| |
|
|
| T |
19354741 |
ttccaatgtaacttctcctatcaagtgattgactgaaaggtcaatagttcgcctatccgggttaacatcagacacataatcttgacctttggtaaataaa |
19354642 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||||| ||||| | |||| | | |||| |||| | || ||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19354641 |
tcaatgatggtatcgtgccattcatccacatgatcagtatcaatttgagtcatgttgtacacacagtgtggcaaagatcctgaaagtttgttatgtgcaa |
19354542 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| | || ||| ||||||||||| |||| ||||||||||||| ||| |||| |||||||| |
|
|
| T |
19354541 |
ggtctaagtgaaacaaattagagagattaaatagttgttgtgggatattcccttcaaattggttggctctcaatatgaccactgttaaggattgtgacat |
19354442 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatg |
511 |
Q |
| |
|
||||||||||||||||| ||||||| || ||||||| |||||| |
|
|
| T |
19354441 |
tttgattggtatggttccagaaaattcgttagctcccaagttcatg |
19354396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 296 - 580
Target Start/End: Complemental strand, 18147726 - 18147442
Alignment:
| Q |
296 |
tgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaa |
395 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||| || | ||||| ||| | ||||||||||||||||||||||||||||||| ||||| |||||| || | |
|
|
| T |
18147726 |
tgaatagtagccatatcagtcaagttgtagacacactttggcatagaatcggaaagtttgttatgtgcaaggtctaagtgaatcaaataagagaggttga |
18147627 |
T |
|
| Q |
396 |
atagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcatt |
495 |
Q |
| |
|
|||||||| | |||||||||||||||||| ||| ||||||||||||| ||| |||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
18147626 |
atagttgttgtggaatagtcccttcaaatttattagctctcaatatgaccactagtaagttttgtgacatcatgattggtatggttccagaaaattcatt |
18147527 |
T |
|
| Q |
496 |
ttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactccacaggttc |
580 |
Q |
| |
|
|||||| || ||||||| | ||||| ||||| |||||||||||| |||| ||| ||||| | ||||||||||||||||||| |
|
|
| T |
18147526 |
ttctcctaagttcatgatttccaattgtttccagtaagagaagtacaatggaagttccccagacaacctattactccacaggttc |
18147442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 166 - 580
Target Start/End: Complemental strand, 19394175 - 19393761
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| || || | ||| | ||||||||||||||| |||| || |
|
|
| T |
19394175 |
ttccaatggcacttctccagacaagctattggctgaaaggtcaacagttcgcctatccggatggacttcataaatataatcttgaccttttgtaaacaac |
19394076 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||||||||||| ||| | || | ||||||||||||||||||| |||||||||| ||| || | ||||| ||| ||||||||||| |||||||||| |
|
|
| T |
19394075 |
tcaattgtggtaatataaaaagaaataaaatgaaaagtaaccatatctgtcaagttgtcgacacactttggcacagaacctgaaagtttattatgtgcaa |
19393976 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
| || || ||||||| || ||||| ||| ||||||||| | |||||||| ||||||||| | || ||||||||||||| ||| ||||||| |||| ||| |
|
|
| T |
19393975 |
gatccaaatgaaacatataagagatattgaatagttgttgtggaatagtaccttcaaattgattggctctcaatatgaccactactaagttttgtggcat |
19393876 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactct-taattgcttccaaccagagaagtacaaaggaacttcaccagatagcct |
564 |
Q |
| |
|
| | ||||||| ||||| |||||||||||| |||||||||||||| ||| ||||| ||||| |||||| || || |||||||||||||| ||| | |
|
|
| T |
19393875 |
cccaactggtatgtttccagaaaattcattttttcccaaattcatga-tctgcaattgtctccaatcagagaggtttaatggaacttcaccagacagctt |
19393777 |
T |
|
| Q |
565 |
attactccacaggttc |
580 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
19393776 |
attactccataggttc |
19393761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 166 - 504
Target Start/End: Original strand, 14895364 - 14895702
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||| |||||||||||||||||| || || || | || ||||||||||| |||||||||||| |||||||| |
|
|
| T |
14895364 |
ttccaatggcacttctccggacaagctattggctgaaaggtcaatagttcgtctctccggacggacttgatacacatattcttgacctttggtaaataaa |
14895463 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
| || |||| || ||||| | | |||| |||| ||| ||||||||||||||||||| || |||||||||||||||| |||||| ||||||| |
|
|
| T |
14895464 |
ttaaatgtgacaggcctccatacatacacatgattagtattcatttgagtcaagttgtagacgctgttcggcaaagatcctgaaaatttgttgtgtgcaa |
14895563 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||| || ||||||||| || |||||| |||| |||||| |||||| ||||||||||| ||||| ||||||||| || |||| ||||| |||||||| |
|
|
| T |
14895564 |
ggtccaaatgaaacaaagaagtgagattgaataattgtggtggaatattcccttcaaattggttagatctcaatataaccacttgtaagtattgtgacat |
14895663 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaa |
504 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
14895664 |
catggttggtatagttccataaaattcattttctcccaa |
14895702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 302 - 580
Target Start/End: Complemental strand, 19334899 - 19334621
Alignment:
| Q |
302 |
gtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagtt |
401 |
Q |
| |
|
|||||||| | ||||||||| ||||| || | || | ||||||||||||||||||||||||||||||||||| || ||||| ||||||||| ||||||| |
|
|
| T |
19334899 |
gtaaccatttcagtcaagttatagacacaatccggtatagatcctgaaagtttgttatgtgcaaggtctaagtaaatcaaataagagagattgaatagtt |
19334800 |
T |
|
| Q |
402 |
gtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcc |
501 |
Q |
| |
|
|| | |||||||||||||||||| | || |||||||||||| | || |||||| ||||||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
19334799 |
gttgtggaatagtcccttcaaattgattggctctcaatatgatcagttgtaagttttgtgacatccctgttggtatgcttccagaaaattcattttctcc |
19334700 |
T |
|
| Q |
502 |
caaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactccacaggttc |
580 |
Q |
| |
|
|||||| |||||||| ||||| |||||| |||||| | | ||||||||||||| |||||||||||||| |||||| |
|
|
| T |
19334699 |
caaatttatgactctcaattgtttccaatcagagagatgctcttgaacttcaccagacagcctattactccataggttc |
19334621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 166 - 501
Target Start/End: Complemental strand, 18104372 - 18104037
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| |||||| |||||||||||||| | ||||||||||| ||||||||| ||||| | | ||| || |||||||||||||| |||| || |
|
|
| T |
18104372 |
ttccaatggcacttcaccagacaagctattagctgaaaggtcaaaagttcgcctttctggttggatttcataaacgtaatcttgaccttttgtaaacaac |
18104273 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
||||||||||||| | || | || || ||||| ||||||||||| ||||||||||||||| || | ||||| ||| || ||||||||||||||||||| |
|
|
| T |
18104272 |
tcaattgtggtagtaaacaaagaagtttcatgaatagtaaccatattagtcaagttgtagacacactttggcatagaaccggaaagtttgttatgtgcaa |
18104173 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||| || ||||| ||||||||| ||||||||| | |||| |||||||||||| | || |||||||||||| ||||||||||| |||||||| |
|
|
| T |
18104172 |
ggtctaagaaaatcaaataagagagattgaatagttgttgcagaattgtcccttcaaattgattggctctcaatatgatcacttctaagttttgtgacat |
18104073 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcc |
501 |
Q |
| |
|
| |||||| |||||| |||||||||||||||| |
|
|
| T |
18104072 |
acctactggtatagttccagaaaattcattttctcc |
18104037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 166 - 579
Target Start/End: Complemental strand, 17950861 - 17950445
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||| |||||||||||||| |||||| |||| || |
|
|
| T |
17950861 |
ttccaatggcacttttccagacaagctattggctgaaaggtcaatagttcgcctatacaggttaacatcatacacataatcttaaccttttgtaaacaac |
17950762 |
T |
|
| Q |
266 |
tcaattgtggtag--aataccataaacttaa-atgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtg |
362 |
Q |
| |
|
||||| || || | | || || |||||| |||||||||||||||||||| ||||| || | ||| | |||||||||||||||||| |||| |
|
|
| T |
17950761 |
tcaatcgttatatctactggcaattcctccgcatgaaatgtaaccatatgagtcaagttatagacacactctggtatagatcctgaaagtttgttttgtg |
17950662 |
T |
|
| Q |
363 |
caaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtga |
462 |
Q |
| |
|
||||||| || |||||||| | || ||||| |||| ||||| |||||||| ||||| ||| ||||| ||||||||||||| |||||||| || ||||| |
|
|
| T |
17950661 |
caaggtccaaatgaaacaagtaaggaagattgaataattgtgttggaatagttccttctaattggttagctctcaatatgacaacttctaatttttgtga |
17950562 |
T |
|
| Q |
463 |
catcatgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagc |
562 |
Q |
| |
|
| |||||||||| ||| || ||||||||||||||||||| ||||||| | ||||| ||||| |||||| || ||||||||||||||||| |
|
|
| T |
17950561 |
taaattgattggtattgttgcagaaaattcattttctcccaagttcatgatttccaattgtctccaatcagagaggtgtcctagaacttcaccagatagc |
17950462 |
T |
|
| Q |
563 |
ctattactccacaggtt |
579 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
17950461 |
ctattactccaaaggtt |
17950445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 301 - 505
Target Start/End: Original strand, 17726646 - 17726850
Alignment:
| Q |
301 |
agtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagt |
400 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
17726646 |
agtaaccatatctgtcaagttgtagacgcactttggcatagaacctgaaagtttgttatgtgcaaggtccaagtgcaacaaagaagagagattgaatagt |
17726745 |
T |
|
| Q |
401 |
tgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctc |
500 |
Q |
| |
|
|||| |||||||| ||||||||| | ||| ||| ||||||||| | |||||||| ||||||||| | ||||||| ||||| ||||||||||||||| |
|
|
| T |
17726746 |
tgtgcaggaataggcccttcaaaatgattacctcccaatatgaccatttctaagtgttgtgacatctctactggtatgtttccagaaaattcattttctc |
17726845 |
T |
|
| Q |
501 |
ccaaa |
505 |
Q |
| |
|
||||| |
|
|
| T |
17726846 |
ccaaa |
17726850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 301 - 505
Target Start/End: Original strand, 19027875 - 19028079
Alignment:
| Q |
301 |
agtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagt |
400 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||| |
|
|
| T |
19027875 |
agtaaccatatctgtcaagttgtagacgcactttggcatagaacctgaaagtttgttatgtgcaaggtccaagtgcaacaaagaagagagattgaatagt |
19027974 |
T |
|
| Q |
401 |
tgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctc |
500 |
Q |
| |
|
|||| |||||||| ||||||||| | ||| ||| ||||||||| | |||||||| ||||||||| | ||||||| ||||| ||||||||||||||| |
|
|
| T |
19027975 |
tgtgcaggaataggcccttcaaaatgattacctcccaatatgaccatttctaagtgttgtgacatctctactggtatgtttccagaaaattcattttctc |
19028074 |
T |
|
| Q |
501 |
ccaaa |
505 |
Q |
| |
|
||||| |
|
|
| T |
19028075 |
ccaaa |
19028079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 304 - 579
Target Start/End: Complemental strand, 19400614 - 19400339
Alignment:
| Q |
304 |
aaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagttgt |
403 |
Q |
| |
|
|||||||| ||||||||| |||||||| | || | |||||||||||||||||| ||||||||||| || |||||||||| || ||||| |||| |||| |
|
|
| T |
19400614 |
aaccatatcagtcaagttatagacgcatttcggtatagatcctgaaagtttgttttgtgcaaggtccaaatgaaacaaataagtaagattgaataattgt |
19400515 |
T |
|
| Q |
404 |
ggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctccca |
503 |
Q |
| |
|
| |||||||||||||||||| ||||| |||||| |||||| ||||||||||| ||||| | |||||||||||||||| |||||||||||||||||| |
|
|
| T |
19400514 |
gttggaatagtcccttcaaattggttagctctcagtatgacaacttctaagttttgtgaaaagttgattggtatggttcccgaaaattcattttctccca |
19400415 |
T |
|
| Q |
504 |
aattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactccacaggtt |
579 |
Q |
| |
|
| ||| |||| ||||| ||||| |||||| || || ||||||||||||||||||||| ||||||||| |
|
|
| T |
19400414 |
agatcaagacttccaattgtctccaatcagagaggtgtcccagagcttcaccagatagcctattacgccacaggtt |
19400339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 166 - 512
Target Start/End: Complemental strand, 18116994 - 18116645
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||| |||||||||| |||| | ||||| ||||||||||||||||||||| | | ||||||||||||||||||||| |||| || |
|
|
| T |
18116994 |
ttccaatggcacttttccagacaagttattagctgaaaagtcaatagttcgcctatctggttcgatttcatacacataatcttgaccttttgtaaacaac |
18116895 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaactta---aatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtg |
362 |
Q |
| |
|
||||||| | | || |||| | | ||| | |||||||||||||||||||||| || | ||| | | | ||||||||||||||||||||||| |
|
|
| T |
18116894 |
tcaattggagcattattccattcatccacaaaattagaagtaaccatatgagtcaagttataaatgcactccgttatagatcctgaaagtttgttatgtg |
18116795 |
T |
|
| Q |
363 |
caaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtga |
462 |
Q |
| |
|
||||||| || |||||||||| || |||||| |||| ||||| |||||| ||||||||||| ||||| |||||| ||||||||||||||| | |||| |
|
|
| T |
18116794 |
caaggtccaaatgaaacaaattagtgagattgaataattgtgttggaatactcccttcaaattggttacctctcagtatgactacttctaaatattgtgg |
18116695 |
T |
|
| Q |
463 |
catcatgattggtatggttccataaaattcattttctcccaaattcatga |
512 |
Q |
| |
|
|| | | ||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
18116694 |
tatgttcaatggtatggttccagaaaattcattttctcccaagttcatga |
18116645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 302 - 579
Target Start/End: Complemental strand, 18109329 - 18109052
Alignment:
| Q |
302 |
gtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagtt |
401 |
Q |
| |
|
|||||||||||||||||||| ||||| || | ||| | ||||| |||||||||||| ||||||||||| || |||||||| | || ||| | |||| || |
|
|
| T |
18109329 |
gtaaccatatgagtcaagttatagacacactttggtatagatcttgaaagtttgttttgtgcaaggtccaaatgaaacaagtaaggaagaatgaataatt |
18109230 |
T |
|
| Q |
402 |
gtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcc |
501 |
Q |
| |
|
||| |||||||| ||||||||| ||||| ||||||||||||| |||||||| || ||||| | |||||||||| ||| || |||||||||||||||| |
|
|
| T |
18109229 |
gtgttggaatagttccttcaaattggttagctctcaatatgacaacttctaatttttgtgataaattgattggtattgttgcagaaaattcattttctcc |
18109130 |
T |
|
| Q |
502 |
caaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactccacaggtt |
579 |
Q |
| |
|
||| ||||||| | ||||| ||||| |||||| || |||||||||||||||||||||||||||| ||||| |
|
|
| T |
18109129 |
caagttcatgatttccaattgtctccaatcagagaggtgtcctagaacttcaccagatagcctattactccaaaggtt |
18109052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 166 - 512
Target Start/End: Complemental strand, 19462218 - 19461867
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| ||||| |||||||||| |||| | ||||| ||||||||||||||||||||| | | ||||||||||||||||||||| |||| || |
|
|
| T |
19462218 |
ttccaatggcacttttccagacaagttattagctgaaaagtcaatagttcgcctatctggttcgatttcatacacataatcttgaccttttgtaaacaac |
19462119 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaactta---aatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtg |
362 |
Q |
| |
|
||||||| | | || |||| | | ||| | |||||||||||||||||||||| || | ||| | | || ||||||||||||||||||||||| |
|
|
| T |
19462118 |
tcaattggagcattattccattcatccacaaaattagaagtaaccatatgagtcaagttataaatgcactccgtcatagatcctgaaagtttgttatgtg |
19462019 |
T |
|
| Q |
363 |
caaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctca--atatgactacttctaagttctgt |
460 |
Q |
| |
|
||||||| || |||||||||| || |||||| |||| ||||| |||||| ||||||||||| ||||| |||||| |||||| ||||||||| | ||| |
|
|
| T |
19462018 |
caaggtccaaatgaaacaaattagtgagattgaataattgtgttggaatactcccttcaaattggttacctctcagtatatgaatacttctaaatattgt |
19461919 |
T |
|
| Q |
461 |
gacatcatgattggtatggttccataaaattcattttctcccaaattcatga |
512 |
Q |
| |
|
| || | | ||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
19461918 |
ggtatgttcaatggtatggttccagaaaattcattttctcccaagttcatga |
19461867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 512
Target Start/End: Complemental strand, 19425577 - 19425367
Alignment:
| Q |
302 |
gtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagtt |
401 |
Q |
| |
|
|||||||||| ||||||||| ||||| || | ||| | |||||||||||||||||| | |||||||| || |||||||||| || ||||| |||| || |
|
|
| T |
19425577 |
gtaaccatatcagtcaagttatagacacattctggtatagatcctgaaagtttgtttagagcaaggtccaaatgaaacaaataaggaagattgaataatt |
19425478 |
T |
|
| Q |
402 |
gtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcc |
501 |
Q |
| |
|
| || ||||||||||||||| ||||| ||||||||||||| |||||||| || ||||| | | ||||||||| |||| |||||| ||||||||| |
|
|
| T |
19425477 |
gccttgggatagtcccttcaaattggttagctctcaatatgacgacttctaatttttgtgataagttcattggtatgattcctgaaaatttattttctcc |
19425378 |
T |
|
| Q |
502 |
caaattcatga |
512 |
Q |
| |
|
|||| |||||| |
|
|
| T |
19425377 |
caaaatcatga |
19425367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 19439691 - 19439613
Alignment:
| Q |
311 |
tgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagaga |
389 |
Q |
| |
|
||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
19439691 |
tgagtcatgttgtagacgcagtgcgacaaagatcctgaaaatttgttatgtgcaaggtccaagtgaaacaaattagaga |
19439613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 19456323 - 19456234
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgaccttt |
255 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||| | ||| ||||||||||||||||| |
|
|
| T |
19456323 |
ttccaatggcacttctccagacaagctattggatgaatcgtcaatagttcgcctttctggtcaaactttataaacataatcttgaccttt |
19456234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 389 - 477
Target Start/End: Complemental strand, 19439447 - 19439359
Alignment:
| Q |
389 |
agattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtat |
477 |
Q |
| |
|
||||| ||||||||| | |||||||| ||||||||| |||||||||||||||| || ||| ||||||| |||||||||||||||||||| |
|
|
| T |
19439447 |
agattgaatagttgttgtggaatagttccttcaaattggttatctctcaatattaccactcctaagttttgtgacatcatgattggtat |
19439359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 277
Target Start/End: Complemental strand, 19425716 - 19425605
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||| | ||||||||||||||||||||| | |||||||||||| ||||| || | ||| || || |||||| ||||||||||||||| |||| || |
|
|
| T |
19425716 |
ttccaaaggcacttctccagacaagctatttgctgaaaggtcaatggttcgtctttttggacttactcgatacatataatcttgaccttttgtaaacaac |
19425617 |
T |
|
| Q |
266 |
tcaattgtggta |
277 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19425616 |
tcaattgtggta |
19425605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17726464 - 17726561
Alignment:
| Q |
119 |
ttattatgagataagcttagtggttgtatttgaacccgtcgaattacttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcg |
216 |
Q |
| |
|
||||| ||||||||| ||| || ||| | |||||| | |||| || |||| |||| ||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
17726464 |
ttattgtgagataagtttaatgtttgaacttgaacaagccgaaataattccgatgttacttcaccagacaagctattggctgaaaggtcaatagttcg |
17726561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 18109468 - 18109419
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttc |
215 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
18109468 |
ttccaatggcacttctccaggcaagctattggctgaaaggtcaatagttc |
18109419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 18147856 - 18147799
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatct |
223 |
Q |
| |
|
|||||||| || ||||||||||||||||||| ||||||||||||||||||||| ||| |
|
|
| T |
18147856 |
ttccaatggcaattctccagacaagctattgcctgaaaggtcaatagttcgcctttct |
18147799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 19027693 - 19027790
Alignment:
| Q |
119 |
ttattatgagataagcttagtggttgtatttgaacccgtcgaattacttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcg |
216 |
Q |
| |
|
||||| ||||||||| ||| || ||| | |||||| | |||| || |||| |||| ||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
19027693 |
ttattgtgagataagtttaatgtttgaacttgaacaagccgaaataattccgatgttacttcaccagacaagctattggctgaaaggtcaatagttcg |
19027790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 19400755 - 19400696
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgg |
225 |
Q |
| |
|
|||||||| || ||| |||||||||||||||| ||||||||||||| |||| |||||||| |
|
|
| T |
19400755 |
ttccaatggcagttccccagacaagctattggttgaaaggtcaataattcgtctatctgg |
19400696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 166 - 580
Target Start/End: Complemental strand, 15536559 - 15536145
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
|||||||| || ||| ||| |||||||||||| |||||||||||||||||| || || | | | | || |||||||||||||||||||||| |||||||| |
|
|
| T |
15536559 |
ttccaatggcagttccccaaacaagctattggctgaaaggtcaatagttcgtctttccgagttgatatcatacacataatcttgacctttggtaaataaa |
15536460 |
T |
|
| Q |
266 |
tcaattgtggtagaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaa |
365 |
Q |
| |
|
|||||||||| || ||||||| | ||| |||| |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
15536459 |
tcaattgtggaagtataccatggatttacatgataagtaaccatttgagtcaagttgtacacgcagtgtggtaaagatcctgaaagtttgttatgtgcaa |
15536360 |
T |
|
| Q |
366 |
ggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacat |
465 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||| |||||| |||||| ||||||||||| || |||||||||||| ||| ||||||| |||||||| |
|
|
| T |
15536359 |
ggtctaagtgaaacaaataagagagattgaataattgtggcggaataatcccttcaaatttattggttctcaatatgaccactactaagttttgtgacat |
15536260 |
T |
|
| Q |
466 |
catgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagccta |
565 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||| | ||||| ||| || |||||| || || |||||||||||||| | ||| |
|
|
| T |
15536259 |
catgattggtatggttccagaaaattcattttctcccaagttcatggtttgcaattgtttcgaagcagagaggtgcattggaacttcaccagacaaacta |
15536160 |
T |
|
| Q |
566 |
ttactccacaggttc |
580 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
15536159 |
ttattccacaggttc |
15536145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 303 - 501
Target Start/End: Original strand, 2709699 - 2709897
Alignment:
| Q |
303 |
taaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagttg |
402 |
Q |
| |
|
||||||||| | ||||||| |||||||| | ||| | ||||||||||||||| || ||||||||||| |||||| |||| | ||||||||| |||| ||| |
|
|
| T |
2709699 |
taaccatataactcaagttatagacgcactctggtatagatcctgaaagtttattttgtgcaaggtccaagtgatacaacttagagagattgaataattg |
2709798 |
T |
|
| Q |
403 |
tggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcc |
501 |
Q |
| |
|
|| ||||||||||||| |||| ||||| |||||||||||| |||| || | || |||||| |||||||||| |||||| |||||||||||||||| |
|
|
| T |
2709799 |
tgttggaatagtccctttaaattggttagctctcaatatgagaactttcaaatcttgcgacatcttgattggtatagttccagaaaattcattttctcc |
2709897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 2709485 - 2709605
Alignment:
| Q |
104 |
attgttacagtcattttattatgagataagcttagtggttgtatttgaacccgtcgaattacttccaatgtcacttctccagacaagctattggatgaaa |
203 |
Q |
| |
|
|||||| |||||| ||||| ||||||||| | | || ||| | |||||| || ||| || |||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
2709485 |
attgttccagtcaaattattgtgagataagttcaatgattgaacttgaacaagttgaaataattccaatggcacttctccagacaagctattggctgaaa |
2709584 |
T |
|
| Q |
204 |
ggtcaatagttcgcctatctg |
224 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
2709585 |
ggtcaatagttcgcctgtctg |
2709605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 511
Target Start/End: Original strand, 13665936 - 13666269
Alignment:
| Q |
178 |
ttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaatcaattgtggta |
277 |
Q |
| |
|
||||||| |||||||||| | |||||||||||||||||| |||||||| | || ||||||| |||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
13665936 |
ttctccaaacaagctattagctgaaaggtcaatagttcgtctatctggattgacttgatacatataatcttgacctttggtaaataaattaaatgtggta |
13666035 |
T |
|
| Q |
278 |
gaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaa |
377 |
Q |
| |
|
| || | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
13666036 |
gggtagtacaaatccacatgaaaagtaaccatatgagtcaagttgtagacgttgtgtggcaaagatcctgaaagtttcatatgtgcaaggtctaggtgaa |
13666135 |
T |
|
| Q |
378 |
acaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtat |
477 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||| | ||||||||| || |||||||||||||| |||| ||||| |||| |||| ||||| ||| |
|
|
| T |
13666136 |
acaaataagagagattaaatagttgtgggggaatactgccttcaaatttattttctctcaatatgaccacttgaaagtttggtgaaatcaagattgttat |
13666235 |
T |
|
| Q |
478 |
ggttccataaaattcattttctcccaaattcatg |
511 |
Q |
| |
|
|||||||| ||||||||||||||| || |||||| |
|
|
| T |
13666236 |
ggttccattaaattcattttctcctaagttcatg |
13666269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 119; Significance: 2e-60; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 166 - 575
Target Start/End: Original strand, 3075 - 3487
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||| | || | ||||| ||||||||||||||| ||| || |
|
|
| T |
3075 |
ttccattgacacttttccagacaagctattgactgaaaggtcaatagttcgcctatctggtcgcacttcatacatataatcttgacctttttgaaacaac |
3174 |
T |
|
| Q |
266 |
tcaattgtggta---gaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtg |
362 |
Q |
| |
|
|||||||| ||| ||| | || | | || ||||||||||| ||| |||| ||||||| ||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
3175 |
tcaattgtcgtatcagaaggcaatgcatccacatataaagtaaccatttgactcaaattgtagatgcagtttggcatagatcctgagagtttgttatgtg |
3274 |
T |
|
| Q |
363 |
caaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtga |
462 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| |||| ||||| |||||||||||||| ||| ||||| |||| |||||||| |||||||| | |||| |
|
|
| T |
3275 |
caaggtccaagtgaaacaaataagagagattgaataattgtgatggaatagtcccttcgaattggttagctcttaatatgacaacttctaaatattgtgg |
3374 |
T |
|
| Q |
463 |
catcatgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagc |
562 |
Q |
| |
|
||| ||||||||||||||||| |||| ||||||||| |||||||||||| | ||||| |||||| |||||| || ||||||||||||| ||| |
|
|
| T |
3375 |
catgttgattggtatggttccagaaaactcattttcttccaaattcatgaattgcaattgtttccaatcagagaggtgtcctagaacttcaccagacagc |
3474 |
T |
|
| Q |
563 |
ctattactccaca |
575 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3475 |
ttattactccaca |
3487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 119; Significance: 2e-60; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 166 - 575
Target Start/End: Complemental strand, 6432 - 6020
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||| | || | ||||| ||||||||||||||| ||| || |
|
|
| T |
6432 |
ttccattgacacttttccagacaagctattgactgaaaggtcaatagttcgcctatctggccgcacttcatacatataatcttgacctttttgaaacaac |
6333 |
T |
|
| Q |
266 |
tcaattgtggta---gaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtg |
362 |
Q |
| |
|
|||||||| ||| ||| | || | | || ||||||||||| ||| |||| ||||||| ||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
6332 |
tcaattgtcgtatcagaaggcaatgcatccacatataaagtaaccatttgactcaaattgtagatgcagtttggcatagatcctgagagtttgttatgtg |
6233 |
T |
|
| Q |
363 |
caaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtga |
462 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| |||| ||||| |||||||||||||| ||| ||||| |||| |||||||| |||||||| | |||| |
|
|
| T |
6232 |
caaggtccaagtgaaacaaataagagagattgaataattgtgatggaatagtcccttcgaattggttagctcttaatatgacaacttctaaatattgtgg |
6133 |
T |
|
| Q |
463 |
catcatgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagc |
562 |
Q |
| |
|
||| ||||||||||||||||| |||| ||||||||| |||||||||||| | ||||| |||||| |||||| || ||||||||||||| ||| |
|
|
| T |
6132 |
catgttgattggtatggttccagaaaactcattttcttccaaattcatgaattgcaattgtttccaatcagagaggtgtcctagaacttcaccagacagc |
6033 |
T |
|
| Q |
563 |
ctattactccaca |
575 |
Q |
| |
|
|||||||||||| |
|
|
| T |
6032 |
ttattactccaca |
6020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 119; Significance: 2e-60; HSPs: 3)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 166 - 575
Target Start/End: Original strand, 2544 - 2956
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgacctttgataaataaa |
265 |
Q |
| |
|
||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||| | || | ||||| ||||||||||||||| ||| || |
|
|
| T |
2544 |
ttccattgacacttttccagacaagctattgactgaaaggtcaatagttcgcctatctggccgcacttcatacatataatcttgacctttttgaaacaac |
2643 |
T |
|
| Q |
266 |
tcaattgtggta---gaataccataaacttaaatgaaaagtaaccatatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtg |
362 |
Q |
| |
|
|||||||| ||| ||| | || | | || ||||||||||| ||| |||| ||||||| ||||| ||||| ||||||||| ||||||||||||| |
|
|
| T |
2644 |
tcaattgtcgtatcagaaggcaatgcatccacatataaagtaaccatttgactcaaattgtagatgcagtttggcatagatcctgagagtttgttatgtg |
2743 |
T |
|
| Q |
363 |
caaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtga |
462 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| |||| ||||| |||||||||||||| ||| ||||| |||| |||||||| |||||||| | |||| |
|
|
| T |
2744 |
caaggtccaagtgaaacaaataagagagattgaataattgtgatggaatagtcccttcgaattggttagctcttaatatgacaacttctaaatattgtgg |
2843 |
T |
|
| Q |
463 |
catcatgattggtatggttccataaaattcattttctcccaaattcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagc |
562 |
Q |
| |
|
||| ||||||||||||||||| |||| ||||||||| |||||||||||| | ||||| |||||| |||||| || ||||||||||||| ||| |
|
|
| T |
2844 |
catgttgattggtatggttccagaaaactcattttcttccaaattcatgaattgcaattgtttccaatcagagaggtgtcctagaacttcaccagacagc |
2943 |
T |
|
| Q |
563 |
ctattactccaca |
575 |
Q |
| |
|
|||||||||||| |
|
|
| T |
2944 |
ttattactccaca |
2956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 21470 - 21304
Alignment:
| Q |
345 |
ctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagttgtggaggaatagtcccttcaaatcggttatctctcaatatgac |
444 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||| |||||||||| ||| ||| ||||| |||| |||||||| |
|
|
| T |
21470 |
ctgagagtttgttatgtgcaaggttcaagtgaaacaaataagagagattgaataattgtggtggaatagtcc-ttcgaattggttagctcttaatatgac |
21372 |
T |
|
| Q |
445 |
tacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcccaaattcatga |
512 |
Q |
| |
|
|||||||| | |||| ||| ||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
21371 |
cacttctaaatattgtggcatgttgattggtatggttccagaaaactcattttctcccaaattcatga |
21304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 21611 - 21522
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgaccttt |
255 |
Q |
| |
|
||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||| | || | ||||| ||||||||||||||| |
|
|
| T |
21611 |
ttccattgacacttttccagacaagctattgactgaaaggtcaatagttcgcctatctggtcgcacttcatacatataatcttgaccttt |
21522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 307 - 573
Target Start/End: Complemental strand, 8460430 - 8460164
Alignment:
| Q |
307 |
catatgagtcaagttgtagacgcagtgtggcaaagatcctgaaagtttgttatgtgcaaggtctaagtgaaacaaatcagagagattaaatagttgtgga |
406 |
Q |
| |
|
|||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| || ||||||||| || ||| | |||| ||||| |
|
|
| T |
8460430 |
catatgagtcaagttgtatttgcacgctggcatagatcctgaaagtttgttatgtgcaaggtccaaatgaaacaaaagagggagttcgaataactgtggt |
8460331 |
T |
|
| Q |
407 |
ggaatagtcccttcaaatcggttatctctcaatatgactacttctaagttctgtgacatcatgattggtatggttccataaaattcattttctcccaaat |
506 |
Q |
| |
|
|||||| | ||||||||| |||| ||||||||||||| |||||||| | | ||||||| | ||||| ||||||||| |||||| |||||||||||| | |
|
|
| T |
8460330 |
ggaatattgccttcaaattggttggctctcaatatgaccacttctaaataccgtgacatgttcattggaatggttccagaaaattgattttctcccaagt |
8460231 |
T |
|
| Q |
507 |
tcatgactcttaattgcttccaaccagagaagtacaaaggaacttcaccagatagcctattactcca |
573 |
Q |
| |
|
| || | | ||||| ||| || || ||| || || |||||||| |||||||||||||||||||| |
|
|
| T |
8460230 |
taatcatttccaattgtttcaaatcaaagaggtccaccggaacttcgccagatagcctattactcca |
8460164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 8460592 - 8460519
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgataca |
239 |
Q |
| |
|
|||||| | |||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
8460592 |
ttccaacggcacttctccagacaagttattagctgaaaggtcaatagttcgcctattagggctaacatcataca |
8460519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 11527 - 11438
Alignment:
| Q |
166 |
ttccaatgtcacttctccagacaagctattggatgaaaggtcaatagttcgcctatctgggctaacatgatacacataatcttgaccttt |
255 |
Q |
| |
|
||||| || ||||| |||||||||||||||| ||||||||||||||||||||||||||| | || | ||||| ||||||||||||||| |
|
|
| T |
11527 |
ttccattgacacttttccagacaagctattgactgaaaggtcaatagttcgcctatctggtcgcacttcatacatataatcttgaccttt |
11438 |
T |
|
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