View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_157 (Length: 305)
Name: NF6864A_low_157
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_157 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 7 - 297
Target Start/End: Original strand, 44891010 - 44891300
Alignment:
| Q |
7 |
caaactactgcttcctcaaaaaactagtttaatttcttgatattaaacagataaaaacgtacactacactttgatcttagccaaaagaccaagaaaaggt |
106 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44891010 |
caaactgctgcttcctcaaaaaactagtttaatttcttgatattaaacagataaaaacgtacactacactttgatcttagccaaaagaccaagaaaaggt |
44891109 |
T |
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| Q |
107 |
ggagaaaggtatgaattacatgtggtactcacttccacttttatatcatacatccatttgctcactctcttgactacacgatgtaggactaactagtatt |
206 |
Q |
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|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
44891110 |
ggagaaaggtatgaattatatgtggtactcacttctacttttatatcatacatccatttactcactctcttgactacacgatgtaggactaactagtatt |
44891209 |
T |
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| Q |
207 |
gttcagcaccaatttgcttcgtggactcacttggtagactatattcagtctttcttctcttatctatattcgttttcttccaatattcttc |
297 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
44891210 |
gttcagcaccaacttgcttcgtggactcacttggtagactatattcagtctttcttctcttatctatattcgttttcttccaatgttcttc |
44891300 |
T |
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