View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_186 (Length: 284)
Name: NF6864A_low_186
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_186 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 33067318 - 33067088
Alignment:
| Q |
1 |
tgttgttggtataaaaattgatgaaatggatcctcctttacctgtgatcaagagggtgaataagttggaagaaggaaacaaaagtgagaatagtctttgg |
100 |
Q |
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| T |
33067318 |
tgttgttggtataaaaattgatgaaatggatcctcctttacctgtgatcaagagggtgaataagttggaagaaggaaacaaaagtgagaatagtctttgg |
33067219 |
T |
|
| Q |
101 |
aaaagaagatcaggttcaagtttggctccattgagaagtttacaggttcaacagattcaagttcaaactccaaagctttgtattgaacctacaactgttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33067218 |
aaaagaagatcaggttcaagtttggctccattgagaagtttacaggttcaacagattcaagttcaaactccaaagctttgtattgaacctacaactgttt |
33067119 |
T |
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| Q |
201 |
gataatggaattagattagacagatccatag |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
33067118 |
gataatggaattagattagacagatccatag |
33067088 |
T |
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