View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_237 (Length: 258)
Name: NF6864A_low_237
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_237 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 5317974 - 5318231
Alignment:
| Q |
1 |
aacacaattgatcaacttttgaccctcattaaatcatcaaataatgtgcaaattttagtccactgtgtagcgaaataaaattaaacttgatacaggtcac |
100 |
Q |
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| T |
5317974 |
aacacaattgatcaacttttgaccctcattaaatcatcaaataatgtgcaaattttagtccactgtgtagcgaaataaaattaaacttgatacaggtcac |
5318073 |
T |
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| Q |
101 |
catcactcaattatggtcaaagtggaggatatgatatctacatcttcatttacttatttacatgacaaataatgacaccaggaaactttacaatcagagt |
200 |
Q |
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| T |
5318074 |
catcactcaattatggtcaaagtggaggatatgatatctacatcttcatttacttatttacatgacaaataatgacaccaggaaactttacaatcagagt |
5318173 |
T |
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| Q |
201 |
ggaactaagcagctgtacaaattattcgcggtccattggttcttttcctttatgttga |
258 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5318174 |
ggaacaaagcagctgtacaaattattcgcggtccattggttcttttcctttatgttga |
5318231 |
T |
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