View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_305 (Length: 247)
Name: NF6864A_low_305
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_305 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 31425570 - 31425360
Alignment:
| Q |
1 |
tagtcttttcgcttaaaaatcaataggttacttgagaaaaccacgaaaataatattacgtacttcatgagaaaaaactaaattgttagtttgtcacaaaa |
100 |
Q |
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| T |
31425570 |
tagtcttttcgcttaaaaatcaaaaggttactttagaaaaccacgaaaataatattaggtacttcatgagaaaaaactaaattgttagtttgtcgcaaaa |
31425471 |
T |
|
| Q |
101 |
ataaataaattggaaccaaaacccaaccacaaattattgttgattaagtatcagacgatatggtatcaacatcattaactatgaaagaatgcgacattaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31425470 |
ataaataaattggaaccaaaacccaaccacaaattattgttgattaagtatcagacgatatggtatcaacatcattaactatgaaagaatgcgacattaa |
31425371 |
T |
|
| Q |
201 |
cgtgcaataaa |
211 |
Q |
| |
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||||||||||| |
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| T |
31425370 |
cgtgcaataaa |
31425360 |
T |
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