View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_329 (Length: 244)
Name: NF6864A_low_329
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_329 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 9 - 244
Target Start/End: Original strand, 41641628 - 41641863
Alignment:
| Q |
9 |
gagatgaatgcaattgagacacttttgataatagatgaactttataggaatgaagagattgagatgaggaaaaaatatgagagcatggtgaaatctgtga |
108 |
Q |
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| T |
41641628 |
gagatgaatgcaattgagacacttttgataatagatgaactttataggaatgaagagattgagatgaggaaaaaatatgagagcatggtgaaatctgtga |
41641727 |
T |
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| Q |
109 |
aacaaggtggaggaaaggctttggtgtattcttctatgcatgtttcgacaccacaattggctcagctaacaggtgttgcggcaattctcagatttccatt |
208 |
Q |
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| T |
41641728 |
aacaaggtggaggaaaggctttggtgtattcttctatgcatgtttcgacaccacaattggctcagctaacaggtgttgcggcaattctcagatttccatt |
41641827 |
T |
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| Q |
209 |
acctggtcttcaagatatgaatgatgatgatcatgt |
244 |
Q |
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| T |
41641828 |
acctggtcttcaagatatggatgatgatgatcatgt |
41641863 |
T |
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