View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_336 (Length: 244)
Name: NF6864A_low_336
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_336 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 18260325 - 18260089
Alignment:
| Q |
7 |
agattcccactaatattcctaatccaagtgaagttaaaaatgctattttttatttgaatcatgatggtgcaccagggcctcatgg-tttggtgcttgctt |
105 |
Q |
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| T |
18260325 |
agattcccactaatattcctaatccaagtgaagttaaaaatgctattttttatttgaatcatgatggtgcaccagggcctcatgggtttggtgcttgctt |
18260226 |
T |
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| Q |
106 |
tttccaaacctattgggatatagttcagaaagatgtgtatgaagctgtggtagaattcttcaagactggatcgctccttcccaactacaatgcaaactct |
205 |
Q |
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|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
18260225 |
tttccaaacctattggaatatagttaagaaagatgtgtatgaagctgtggtagaattcttcaagactggatggctccttcccaactacaatgcaaactct |
18260126 |
T |
|
| Q |
206 |
cttatcttgatccctaaaactccagatgctaacacca |
242 |
Q |
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|||||||||||||||||||||||| ||||| |||||| |
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| T |
18260125 |
cttatcttgatccctaaaactccatatgctgacacca |
18260089 |
T |
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