View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_405 (Length: 232)
Name: NF6864A_low_405
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_405 |
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Alignment Details
Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 7723081 - 7722857
Alignment:
| Q |
1 |
ataaaatgtcgaaatactagtcagcacctgcagtccacgttgtcgtgaattgcaaatggagacatgtacatacaaatacaaaatatatatagtaaaggag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7723081 |
ataaaatgtcgaaatactagtcagcacctgcagtccacgttgtcgtgaattgcaaatggagacatgtacatacaaatacaaaatatatatagtaaaggag |
7722982 |
T |
|
| Q |
101 |
ataaaattatagagcatannnnnnnnnnnnggacccaatgcaataaatgaaatgaagggtaagtcagggagtgagtgtgtaatgtaagcaagtgtttgag |
200 |
Q |
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||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7722981 |
ataaaattataaagcata--agagagagagggacccaatgcaataaatgaaatgaagggtaagtcagggagtgagtgtgtaatgtaagcaagtgtttgag |
7722884 |
T |
|
| Q |
201 |
tttctattatatctctgcagaattact |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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|
| T |
7722883 |
tttctattatatctctgcagaattact |
7722857 |
T |
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