View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_428 (Length: 230)
Name: NF6864A_low_428
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_428 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 31869912 - 31870131
Alignment:
| Q |
1 |
gaccatggcgcgaccacaatttaaaacgttacactacattaccccgatgcatgtttaaagtttcaacatcaagcaaa-ctatacaaagccaatataaact |
99 |
Q |
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| T |
31869912 |
gaccatggcgcgaccacaatttaaaacgttacactacattaccccgatgcatgtttaaagtttcaacatcaagcaaaactatacaaagccaatataaact |
31870011 |
T |
|
| Q |
100 |
aaaccgtgcacaattttgttttgttgttaagttacttttcagcacaaatcaatttacttcaaactccttttaactaaaatcaaaattaactaaaacaaaa |
199 |
Q |
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||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31870012 |
aaaccgtgcacaatttt-----gttgttaagttacttttcaacacaaatcaatttacttcaaactccttttaactaaaatcaaaattaactaaaacaaaa |
31870106 |
T |
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| Q |
200 |
accaagattaagcagggtcaccttt |
224 |
Q |
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||||||||||||||||||||||||| |
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| T |
31870107 |
accaagattaagcagggtcaccttt |
31870131 |
T |
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