View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_437 (Length: 230)
Name: NF6864A_low_437
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_437 |
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Alignment Details
Target: chr8 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2282123 - 2282270
Alignment:
| Q |
1 |
atccctttcactcttatccttcactatcaaagaatatgtgctgtgaatcacccaaggagctagtaccacatactgcaaaattattaacaccaaaataatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2282123 |
atccctttcactcttatccttcactatcaaagaatatgtgctgtgaatcacccaaggagctagtaccacatactgcaaaattattaacaccaaaataatg |
2282222 |
T |
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| Q |
101 |
tttacatataagagtcaaattcttagaataaggagttaattgcgtcag |
148 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2282223 |
tttacatataagagtcaaattcttagaataaggagttaattgcgtcag |
2282270 |
T |
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