View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_66 (Length: 377)
Name: NF6864A_low_66
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_66 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 30294003 - 30294379
Alignment:
| Q |
1 |
tcaacttttcaatgaaggagcttggttcagaaagagaggaggactccatcatcttttacatgcaaaagatatatccaggttgttacaaataagaattttc |
100 |
Q |
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| T |
30294003 |
tcaacttttcaatgaaggagcttggttccgaaagagaggaggactccatcatcttttacatgcaaaagatatatccaggttgttacaaataagaattttc |
30294102 |
T |
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| Q |
101 |
ttatatgtaacataaaacattctatttgaactcgtctcatagcttgtcgtataaatttaaatagatgaatggaaaaactttttggaacgtatgtgttgcg |
200 |
Q |
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| T |
30294103 |
ttatatgtaacataaaacattctatttgaactcgtctcatagcttgtcgtataaatttaaatagatgaatggaaaaactttttggaacgtatgtgttgcg |
30294202 |
T |
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| Q |
201 |
aagaccgtaggagtttagaagatgaaaataaatcagaagagcttagattgtgggcttcattccggggacagacactaggaagaacaggttcggtttttgt |
300 |
Q |
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| T |
30294203 |
aagaccgtaggagtttagaagatgaaaacaaatcagaagagcttagattgtgggcttcattccggggacagacactaggaagaacaggttcggtttttgt |
30294302 |
T |
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| Q |
301 |
attattttctaaattagatgttcgtggaatttttgggaatttttgtgatcattgaaatcatatttgtaacagttaga |
377 |
Q |
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| T |
30294303 |
attattttctaaattagacgttcgtggaatttttgggaatttttgtgatcattgaaatcatatttgtaacagttaga |
30294379 |
T |
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