View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6864A_low_82 (Length: 359)
Name: NF6864A_low_82
Description: NF6864A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6864A_low_82 |
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Alignment Details
Target: chr2 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 6917765 - 6917429
Alignment:
| Q |
1 |
tggaaacagcatgcatgtgtcccaagaacagtcagcaaattaggcaaaaattacttatcacttggccctgcaccaactcttagtggaaactgagtgtttg |
100 |
Q |
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| T |
6917765 |
tggaaacatcatgcatatgtgccaagaacagtcatcaaatagtgcaaaaattacttatcacttggccctgcaccatctcttagtggaaactgagtgtttg |
6917666 |
T |
|
| Q |
101 |
tgatcaatattattattgaataataagtctgtgcatttagcattttatattgagtgtgctcaaacaacaagcaaaaggaaaatcagaacctatatgtttc |
200 |
Q |
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| T |
6917665 |
tgatcaatattattattgaataataagtctgtgcatttagcattttatattgagtgtgctcaaacaacaagcaaatggaaaatcagaacctatatgtttc |
6917566 |
T |
|
| Q |
201 |
ggaatcaacctcgccgcgctcaatcttgatggcctggaacttgcctttctggacagttgtgacctctgtatggggagcgaagtgctcccggcttcaaact |
300 |
Q |
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| T |
6917565 |
gaaatcaacctcgccgcgctcaatcttgatggcctggaacttgccattctggacagttgtgacctctgtatggggagcgaagtgctcccggcttcaaact |
6917466 |
T |
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| Q |
301 |
cgtctccggatagtacctgtttcctgttgcagaactg |
337 |
Q |
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||||||||||||||||||||| ||||||||||||||| |
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| T |
6917465 |
cgtctccggatagtacctgttccctgttgcagaactg |
6917429 |
T |
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