View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6865A_low_163 (Length: 250)
Name: NF6865A_low_163
Description: NF6865A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6865A_low_163 |
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Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 34142453 - 34142215
Alignment:
| Q |
4 |
tgctcactcataatgactattaaattaaccgtccctctttgagcttgtttatacattattatatagtttatacaattaattgattttgcctcacaaactg |
103 |
Q |
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| T |
34142453 |
tgctcactcataatgactattaaattaaccgtccctctttgagcttgtttatacattattatatagtttatacaattaattgattttgcctcacaaactg |
34142354 |
T |
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| Q |
104 |
ggtttttggtagcaagattatggttgcaaatgagtagagctagttcaatgatttttgaatgcttgttattttccatctgatcaaatgctaagttgctaac |
203 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34142353 |
ggtttttggtagcaagattatggttgcaaatgcgtagagctagttcaatgatttttgaatgcttgttattttccatctgatcaaatgctaagttgctaac |
34142254 |
T |
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| Q |
204 |
atgttttgcatattgatatttgtggttttcagaacacca |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
34142253 |
atgttttgcatattgatatttgtggttttcagaacacca |
34142215 |
T |
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